primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score rps16-trnQ-UUG_p1 rps16-trnQ-UUG 1 AAGTCGCACGTTGCTTTCTA GAGGTTCGAATCCTTCCGTC 20 20 45.0 55.0 58.1 58.1 8.1 16.9 0.215425 5795 7072 1346-1356 1.000000 80.7 rps16-trnQ-UUG_p2 rps16-trnQ-UUG 2 TCATGTCCTTCAAGTCGCAC GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 58.2 58.1 0.0 16.9 0.280333 5795 7072 1357-1367 1.000000 80.2 rps16-trnQ-UUG_p3 rps16-trnQ-UUG 3 AAGTCGCACGTTGCTTTCTA TTCGGAGGTTCGAATCCTTC 20 20 45.0 50.0 58.1 57.3 8.1 16.9 0.806797 5795 7072 1350-1360 1.000000 76.0 rps16-trnQ-UUG_p4 rps16-trnQ-UUG 4 AAGTCGCACGTTGCTTTCTA TAAGGCAACGGGTTTTGGTC 20 20 45.0 50.0 58.1 58.7 8.1 0.0 0.818817 5795 7072 1376-1386 1.000000 75.8 rps16-trnQ-UUG_p5 rps16-trnQ-UUG 5 ATCATGTCCTTCAAGTCGCA GAGGTTCGAATCCTTCCGTC 20 20 45.0 55.0 57.2 58.1 0.0 16.9 0.844354 5795 7072 1358-1368 1.000000 75.7 psbI-trnS-GCU_p1 psbI-trnS-GCU 1 CTTATCTAACGATCCGGGCC GGGTTCGAATCCCTCTCTCT 20 20 55.0 55.0 57.6 58.2 0.0 17.2 0.582336 8220 8344 185-191 1.000000 80.0 psbI-trnS-GCU_p2 psbI-trnS-GCU 2 CTTATCTAACGATCCGGGCC ATTGGGAGAGATGGCTGAGT 20 20 55.0 50.0 57.6 58.1 0.0 0.0 0.474855 8220 8344 254-260 1.000000 79.6 psbI-trnS-GCU_p3 psbI-trnS-GCU 3 CTTATCTAACGATCCGGGCC TTCGAATCCCTCTCTCTCCG 20 20 55.0 55.0 57.6 58.3 0.0 0.0 0.683870 8220 8344 182-188 1.000000 79.3 psbI-trnS-GCU_p4 psbI-trnS-GCU 4 CTTATCTAACGATCCGGGCC GTGGACTAAAGCGGCAGATT 20 20 55.0 50.0 57.6 58.3 0.0 1.4 0.626341 8220 8344 236-242 1.000000 78.7 psbI-trnS-GCU_p5 psbI-trnS-GCU 5 CTTATCTAACGATCCGGGCC TGGACTAAAGCGGCAGATTG 20 20 55.0 50.0 57.6 58.3 0.0 1.4 0.627569 8220 8344 235-241 1.000000 78.7 petN-psbM_p1 petN-psbM 1 TCTTGCTTGGGCTGCTTTAA TGCTACTGCACTGTTCATTCT 20 21 45.0 42.9 58.0 57.6 0.0 0.0 1.413468 29466 30358 893-1064 1.000000 73.9 petN-psbM_p2 petN-psbM 2 AGTATGGGGAAGGAGTGGAC TGCTACTGCACTGTTCATTCT 20 21 55.0 42.9 58.1 57.6 0.0 0.0 1.526483 29466 30358 842-1013 1.000000 73.1 petN-psbM_p3 petN-psbM 3 GTATGGGGAAGGAGTGGACT TGCTACTGCACTGTTCATTCT 20 21 55.0 42.9 58.1 57.6 0.0 0.0 1.526483 29466 30358 841-1012 1.000000 73.1 petN-psbM_p4 petN-psbM 4 TATGGGGAAGGAGTGGACTC TGCTACTGCACTGTTCATTCT 20 21 55.0 42.9 57.8 57.6 0.0 0.0 1.583671 29466 30358 840-1011 1.000000 72.7 petN-psbM_p5 petN-psbM 5 AGTAAGTCTTGCTTGGGCTG TGCTACTGCACTGTTCATTCT 20 21 50.0 42.9 57.8 57.6 0.0 0.0 1.598551 29466 30358 899-1070 1.000000 72.5 psbM-trnD-GUC_p1 psbM-trnD-GUC 1 AGAATGAACAGTGCAGTAGC TGCTATACACCTTGCTGGGA 20 20 45.0 50.0 55.8 58.4 0.0 2.7 2.650401 30464 31190 852-865 1.000000 61.9 psbM-trnD-GUC_p2 psbM-trnD-GUC 2 AGAATGAACAGTGCAGTAGC TTCAATTGGTCAGAGCACCG 20 20 45.0 50.0 55.8 58.5 0.0 5.4 2.706630 30464 31190 826-839 1.000000 61.5 psbM-trnD-GUC_p3 psbM-trnD-GUC 3 AGAATGAACAGTGCAGTAGC ACACCTTGCTGGGATTGTAG 20 20 45.0 50.0 55.8 57.5 0.0 2.7 2.726197 30464 31190 846-859 1.000000 61.3 psbM-trnD-GUC_p4 psbM-trnD-GUC 4 AGAATGAACAGTGCAGTAGC CACCTTGCTGGGATTGTAGT 20 20 45.0 50.0 55.8 57.5 0.0 2.7 2.726197 30464 31190 845-858 1.000000 61.3 psbM-trnD-GUC_p5 psbM-trnD-GUC 5 AGAATGAACAGTGCAGTAGC ATGCTATACACCTTGCTGGG 20 20 45.0 50.0 55.8 57.4 0.0 1.7 2.875136 30464 31190 853-866 1.000000 60.1 trnE-UUC-trnT-GGU_p1 trnE-UUC-trnT-GGU 1 GCATCGACCCAGGAAGAATT GAACCGATGACTTACGCCTT 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.050093 31793 32285 521-692 1.000000 86.4 trnE-UUC-trnT-GGU_p2 trnE-UUC-trnT-GGU 2 GCATCGACCCAGGAAGAATT CCATGGCGTTACTCTACCAC 20 20 50.0 55.0 58.0 58.1 0.0 0.0 0.108190 31793 32285 500-671 1.000000 86.0 trnE-UUC-trnT-GGU_p3 trnE-UUC-trnT-GGU 3 GCATCGACCCAGGAAGAATT AAGCCCTTTCTTTTCTCGCA 20 20 50.0 45.0 58.0 58.0 0.0 0.0 0.062866 31793 32285 946-1113 1.000000 85.6 trnE-UUC-trnT-GGU_p4 trnE-UUC-trnT-GGU 4 GGATCCTAGTTCGGGACTGA GAACCGATGACTTACGCCTT 20 20 55.0 50.0 57.9 58.0 3.8 0.0 0.074805 31793 32285 989-1161 1.000000 85.3 trnE-UUC-trnT-GGU_p5 trnE-UUC-trnT-GGU 5 GGATCCTAGTTCGGGACTGA AAGCCCTTTCTTTTCTCGCA 20 20 55.0 45.0 57.9 58.0 3.8 0.0 0.087578 31793 32285 1414-1582 1.000000 85.0 psbC-trnS-UGA_p1 psbC-trnS-UGA 1 CCTGTTCTTTCCATGACCCC GGTGGCTGAGTGGTTGATAG 20 20 55.0 55.0 58.2 58.0 0.0 0.0 0.190415 35546 35693 253-262 1.000000 84.1 psbC-trnS-UGA_p2 psbC-trnS-UGA 2 CCTGTTCTTTCCATGACCCC GGTTGATAGCTCCGGTCTTG 20 20 55.0 55.0 58.2 58.1 0.0 0.0 0.219251 35546 35693 242-251 1.000000 84.1 psbC-trnS-UGA_p3 psbC-trnS-UGA 3 CCTGTTCTTTCCATGACCCC GCTGAGTGGTTGATAGCTCC 20 20 55.0 55.0 58.2 58.1 0.0 0.0 0.213831 35546 35693 249-258 1.000000 84.0 psbC-trnS-UGA_p4 psbC-trnS-UGA 4 CCTGTTCTTTCCATGACCCC GGCTGAGTGGTTGATAGCTC 20 20 55.0 55.0 58.2 58.1 0.0 0.0 0.213831 35546 35693 250-259 1.000000 84.0 psbC-trnS-UGA_p5 psbC-trnS-UGA 5 TTCCATGACCCCTCTTAGCT GGTGGCTGAGTGGTTGATAG 20 20 50.0 55.0 57.7 58.0 0.0 0.0 0.300272 35546 35693 245-254 1.000000 83.4 trnT-UGU-trnL-UAA_p1 trnT-UGU-trnL-UAA 1 GGAATCGAACCGATGACCAT ACCAATTTCGCCATATCCCC 20 20 50.0 50.0 57.8 58.0 15.5 0.0 0.245117 46582 47592 987-1094 1.000000 84.1 trnT-UGU-trnL-UAA_p2 trnT-UGU-trnL-UAA 2 GGAATCGAACCGATGACCAT TAGCGTCTACCAATTTCGCC 20 20 50.0 50.0 57.8 58.1 15.5 0.0 0.309926 46582 47592 995-1102 1.000000 83.5 trnT-UGU-trnL-UAA_p3 trnT-UGU-trnL-UAA 3 AAATGCGATGCTCTAACCCC ACCAATTTCGCCATATCCCC 20 20 50.0 50.0 58.3 58.0 0.0 0.0 0.324286 46582 47592 959-1066 1.000000 83.5 trnT-UGU-trnL-UAA_p4 trnT-UGU-trnL-UAA 4 AAATGCGATGCTCTAACCCC TAGCGTCTACCAATTTCGCC 20 20 50.0 50.0 58.3 58.1 0.0 0.0 0.389095 46582 47592 967-1074 1.000000 83.0 trnT-UGU-trnL-UAA_p5 trnT-UGU-trnL-UAA 5 GGAATCGAACCGATGACCAT ATCCAATCAAGTCCGTAGCG 20 20 50.0 50.0 57.8 57.8 15.5 0.0 0.465562 46582 47592 1010-1117 1.000000 82.3 ndhC-trnV-UAC_p1 ndhC-trnV-UAC 1 GGTCCTTCACTAATCGGAGC AGAAGGTCTACGGTTCGAGT 20 20 55.0 50.0 57.8 57.8 0.0 0.0 0.423885 51031 52670 1786-1795 1.000000 77.5 ndhC-trnV-UAC_p2 ndhC-trnV-UAC 2 GGTCCTTCACTAATCGGAGC AGCCCAATGCAACAAAATGC 20 20 55.0 45.0 57.8 58.5 0.0 0.0 0.700661 51031 52670 1868-1877 1.000000 75.3 ndhC-trnV-UAC_p3 ndhC-trnV-UAC 3 GGTCCTTCACTAATCGGAGC GAAGGTCTACGGTTCGAGTC 20 20 55.0 55.0 57.8 57.5 0.0 0.0 0.767657 51031 52670 1785-1794 1.000000 74.8 ndhC-trnV-UAC_p4 ndhC-trnV-UAC 4 GGTCCTTCACTAATCGGAGC GTTCGAGTCCGTATAGCCCT 20 20 55.0 55.0 57.8 58.7 0.0 0.0 0.909951 51031 52670 1774-1783 1.000000 73.7 ndhC-trnV-UAC_p5 ndhC-trnV-UAC 5 GGTCCTTCACTAATCGGAGC GAAAGAGCCCAATGCAACAA 20 20 55.0 45.0 57.8 57.2 0.0 0.0 1.044732 51031 52670 1873-1882 1.000000 72.5 atpB_p1 atpB 1 CGTGGTTTGGTAATACGCCA CGATCAACTTGCTATCGGACA 20 21 50.0 47.6 58.6 58.2 0.0 5.4 1.749846 54106 55593 1683-1684 1.000000 66.6 atpB_p2 atpB 2 GGGGCGTGGTTTGGTAATAC CGATCAACTTGCTATCGGACA 20 21 55.0 47.6 58.9 58.2 0.0 5.4 2.093321 54106 55593 1687-1688 1.000000 63.8 atpB_p3 atpB 3 CGTGGTTTGGTAATACGCCA CGATCAACTTGCTATCGGAC 20 20 50.0 50.0 58.6 56.4 0.0 5.4 2.125395 54106 55593 1683-1684 1.000000 63.6 atpB_p4 atpB 4 AGGGGCGTGGTTTGGTAATA CGATCAACTTGCTATCGGACA 20 21 50.0 47.6 59.0 58.2 0.0 5.4 2.197084 54106 55593 1688-1689 1.000000 63.0 atpB_p5 atpB 5 TAGGGGCGTGGTTTGGTAAT CGATCAACTTGCTATCGGACA 20 21 50.0 47.6 59.0 58.2 0.0 5.4 2.197084 54106 55593 1689-1690 1.000000 63.0 accD-psaI_p1 accD-psaI 1 CCAATCGTACCGCGTAATCT AAAGAAGCCATTGCAATCGC 20 20 50.0 45.0 57.9 58.0 4.9 19.9 0.130252 59995 60386 554-586 1.000000 85.3 accD-psaI_p2 accD-psaI 2 CCAATCGTACCGCGTAATCT GCAGGAAATACTAGGCCCAC 20 20 50.0 55.0 57.9 58.0 4.9 0.0 0.161119 59995 60386 536-568 1.000000 85.2 accD-psaI_p3 accD-psaI 3 AGTTATTTCAGCTGCACGGT AAAGAAGCCATTGCAATCGC 20 20 45.0 45.0 57.8 58.0 9.5 19.9 0.185433 59995 60386 514-546 1.000000 85.1 accD-psaI_p4 accD-psaI 4 AGTTATTTCAGCTGCACGGT GCAGGAAATACTAGGCCCAC 20 20 45.0 55.0 57.8 58.0 9.5 0.0 0.216300 59995 60386 496-528 1.000000 84.9 accD-psaI_p5 accD-psaI 5 ATTTCAGCTGCACGGTTTCT AAAGAAGCCATTGCAATCGC 20 20 45.0 45.0 58.4 58.0 9.5 19.9 0.391221 59995 60386 510-542 1.000000 83.4 psaJ-rpl33_p1 psaJ-rpl33 1 ATATCTTTCCACAGCGCCTG GCCTGGCGATTCCTTATTGA 20 20 50.0 50.0 58.0 58.0 2.3 1.4 0.073640 68597 69117 720-736 1.000000 82.3 psaJ-rpl33_p2 psaJ-rpl33 2 ATATCTTTCCACAGCGCCTG TAGAAATGCCTGGCGATTCC 20 20 50.0 50.0 58.0 58.0 2.3 24.2 0.073640 68597 69117 727-743 1.000000 82.3 psaJ-rpl33_p3 psaJ-rpl33 3 CATATCTTTCCACAGCGCCT GCCTGGCGATTCCTTATTGA 20 20 50.0 50.0 58.0 58.0 2.3 1.4 0.073640 68597 69117 721-737 1.000000 82.3 psaJ-rpl33_p4 psaJ-rpl33 4 CATATCTTTCCACAGCGCCT TAGAAATGCCTGGCGATTCC 20 20 50.0 50.0 58.0 58.0 2.3 24.2 0.073640 68597 69117 728-744 1.000000 82.2 psaJ-rpl33_p5 psaJ-rpl33 5 ATGGTTTGGGTCTTTAGCGG GCCTGGCGATTCCTTATTGA 20 20 50.0 50.0 58.2 58.0 0.0 1.4 0.198494 68597 69117 687-703 1.000000 81.4 infA_p1 infA 1 AGCTTCGAGTTGTATCTCTCAC AGTTGATGATATTTCAAGGGGT 22 22 45.5 36.4 57.6 55.1 0.0 3.1 7.262494 81247 81483 283-315 1.000000 47.9 infA_p2 infA 2 AGCTTCGAGTTGTATCTCTCAC TGATGATATTTCAAGGGGTTACC 22 23 45.5 39.1 57.6 56.0 0.0 0.0 7.332072 81247 81483 280-312 1.000000 47.9 infA_p3 infA 3 AGCTTCGAGTTGTATCTCTCAC GTTGATGATATTTCAAGGGGTTACC 22 25 45.5 40.0 57.6 58.0 0.0 0.0 7.403728 81247 81483 282-314 1.000000 47.9 infA_p4 infA 4 GCTTCGAGTTGTATCTCTCACC AGTTGATGATATTTCAAGGGGT 22 22 50.0 36.4 58.6 55.1 0.0 3.1 7.457852 81247 81483 282-314 1.000000 47.9 infA_p5 infA 5 AGCTTCGAGTTGTATCTCTCAC AGTTGATGATATTTCAAGGGGTT 22 23 45.5 34.8 57.6 55.9 0.0 3.1 7.500264 81247 81483 283-315 1.000000 47.9 rpl16_p1 rpl16 1 CCTCAATACCCCTTTTGTTT CTTTTTCCGTTAAATCAAACAA 20 22 40.0 27.3 53.3 52.1 0.0 0.0 12.549289 82678 84115 1564-1594 1.000000 42.3 rpl16_p2 rpl16 2 CCTCAATACCCCTTTTGTTT CTTTTTCCGTTAAATCAAACAAA 20 23 40.0 26.1 53.3 53.0 0.0 0.0 12.690534 82678 84115 1564-1594 1.000000 42.3 rpl16_p3 rpl16 3 CCTCAATACCCCTTTTGTTT CTTTTTCCGTTAAATCAAACAAAA 20 24 40.0 25.0 53.3 53.8 0.0 0.0 12.901786 82678 84115 1564-1594 1.000000 42.3 rpl16_p4 rpl16 4 CCTCAATACCCCTTTTGTTTATCT CTTTTTCCGTTAAATCAAACAA 24 22 37.5 27.3 56.6 52.1 0.0 0.0 13.214578 82678 84115 1564-1594 1.000000 42.3 rpl16_p5 rpl16 5 CCTCAATACCCCTTTTGTTTATCT CTTTTTCCGTTAAATCAAACAAA 24 23 37.5 26.1 56.6 53.0 0.0 0.0 13.355823 82678 84115 1564-1594 1.000000 42.3 rps3_p1 rps3 1 TGAACTCTGCAATGGAGCTC CGGGCGTTCTTATGAGGAAA 20 20 50.0 50.0 57.9 58.0 4.7 0.0 0.123548 84276 84938 1661-1699 1.000000 81.7 rps3_p2 rps3 2 TGAACTCTGCAATGGAGCTC TTATCATTCATTGGCGGGGG 20 20 50.0 50.0 57.9 58.0 4.7 0.0 0.111050 84276 84938 1789-1827 1.000000 81.6 rps3_p3 rps3 3 CTGAACTCTGCAATGGAGCT TTATCATTCATTGGCGGGGG 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.116945 84276 84938 1790-1828 1.000000 81.6 rps3_p4 rps3 4 TGAACTCTGCAATGGAGCTC TCTGACTTTCGCGAGACATG 20 20 50.0 50.0 57.9 58.0 4.7 9.6 0.122394 84276 84938 1861-1899 1.000000 81.5 rps3_p5 rps3 5 CTGAACTCTGCAATGGAGCT TCTGACTTTCGCGAGACATG 20 20 50.0 50.0 57.9 58.0 0.0 9.6 0.128289 84276 84938 1862-1900 1.000000 81.4 rps3-rpl22_p1 rps3-rpl22 1 CCAAGTCTGAAACCAAGTGGA TTAAGACCCAGGGCTAGAGG 21 20 47.6 55.0 58.1 57.8 3.8 4.9 1.245297 84939 85007 178-197 1.000000 77.8 rps3-rpl22_p2 rps3-rpl22 2 TGGTTGTGTGAACCAAAAGGA TTAAGACCCAGGGCTAGAGG 21 20 42.9 55.0 58.2 57.8 3.8 4.9 1.367328 84939 85007 218-237 1.000000 76.2 rps3-rpl22_p3 rps3-rpl22 3 ACCAAGTCTGAAACCAAGTGG TTAAGACCCAGGGCTAGAGG 21 20 47.6 55.0 58.3 57.8 0.0 4.9 1.521384 84939 85007 179-198 1.000000 75.5 rps3-rpl22_p4 rps3-rpl22 4 TGGTTGTGTGAACCAAAAGG TTAAGACCCAGGGCTAGAGG 20 20 45.0 55.0 56.7 57.8 3.8 4.9 1.513504 84939 85007 218-237 1.000000 75.0 rps3-rpl22_p5 rps3-rpl22 5 CCAAGTCTGAAACCAAGTGG TTAAGACCCAGGGCTAGAGG 20 20 50.0 55.0 56.5 57.8 0.0 4.9 1.627293 84939 85007 178-197 1.000000 74.7 ndhF-rpl32_p1 ndhF-rpl32 1 TGTTGCTGTCGGAATAAGCA ACTGACTTTGCTAAAGAAAAAGCT 20 24 45.0 33.3 57.8 57.5 7.1 13.3 4.634189 114083 115056 1000-1186 1.000000 48.7 ndhF-rpl32_p2 ndhF-rpl32 2 TGTTGCTGTCGGAATAAGCA ACTGACTTTGCTAAAGAAAAAGC 20 23 45.0 34.8 57.8 56.2 7.1 13.3 4.970056 114083 115056 1000-1186 1.000000 46.0 ndhF-rpl32_p3 ndhF-rpl32 3 TGCTGTCGGAATAAGCAGAA ACTGACTTTGCTAAAGAAAAAGCT 20 24 45.0 33.3 57.2 57.5 7.1 13.3 5.217430 114083 115056 997-1183 1.000000 45.8 ndhF-rpl32_p4 ndhF-rpl32 4 TTGCTGTCGGAATAAGCAGA ACTGACTTTGCTAAAGAAAAAGCT 20 24 45.0 33.3 57.2 57.5 10.1 13.3 5.217430 114083 115056 998-1184 1.000000 45.8 ndhF-rpl32_p5 ndhF-rpl32 5 TGTTGCTGTCGGAATAAGCA CTGACTTTGCTAAAGAAAAAGCT 20 23 45.0 34.8 57.8 55.9 7.1 13.3 5.229486 114083 115056 999-1185 1.000000 45.8 rpl32-trnL-UAG_p1 rpl32-trnL-UAG 1 TGTGCGACAAACAAATAAGA AGCGTGTCTACCGATTTCAC 20 20 35.0 50.0 53.8 58.0 0.0 0.0 4.234839 115231 116178 748-1011 1.000000 51.2 rpl32-trnL-UAG_p2 rpl32-trnL-UAG 2 TGTGCGACAAACAAATAAGA CAGCGTGTCTACCGATTTCA 20 20 35.0 50.0 53.8 58.0 0.0 0.0 4.236209 115231 116178 749-1012 1.000000 51.2 rpl32-trnL-UAG_p3 rpl32-trnL-UAG 3 TGTGCGACAAACAAATAAGA TTTACAGTATGCCGCCACTC 20 20 35.0 50.0 53.8 58.0 0.0 0.0 4.245551 115231 116178 808-1071 1.000000 51.0 rpl32-trnL-UAG_p4 rpl32-trnL-UAG 4 TGTGCGACAAACAAATAAGA TCCTAAGAGCAGCGTGTCTA 20 20 35.0 50.0 53.8 57.9 0.0 0.0 4.351286 115231 116178 758-1021 1.000000 50.2 rpl32-trnL-UAG_p5 rpl32-trnL-UAG 5 TGTGCGACAAACAAATAAGAA AGCGTGTCTACCGATTTCAC 21 20 33.3 50.0 54.6 58.0 0.0 0.0 4.370191 115231 116178 748-1011 1.000000 50.1 ccsA_p1 ccsA 1 GTGAAATCGGTAGACACGCT GGATTCTGGACCACGAGAAC 20 20 50.0 55.0 58.0 58.0 0.0 0.0 0.019370 116337 117308 1483-1489 1.000000 81.5 ccsA_p2 ccsA 2 TGAAATCGGTAGACACGCTG GGATTCTGGACCACGAGAAC 20 20 50.0 55.0 58.0 58.0 0.0 0.0 0.020741 116337 117308 1482-1488 1.000000 81.5 ccsA_p3 ccsA 3 GTGAAATCGGTAGACACGCT TTCTCGATGGCTTCTCTTGC 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.023566 116337 117308 1707-1713 1.000000 81.4 ccsA_p4 ccsA 4 GAGTGGCGGCATACTGTAAA GGATTCTGGACCACGAGAAC 20 20 50.0 55.0 58.0 58.0 17.2 0.0 0.030082 116337 117308 1423-1429 1.000000 81.4 ccsA_p5 ccsA 5 TGAAATCGGTAGACACGCTG TTCTCGATGGCTTCTCTTGC 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.024937 116337 117308 1706-1712 1.000000 81.3 ccsA-ndhD_p1 ccsA-ndhD 1 TGGGACCCCAAAGAAACTTG GGATTCTGGACCACGAGAAC 20 20 50.0 55.0 57.9 58.0 8.4 0.0 0.092194 117309 117531 569-569 1.000000 82.2 ccsA-ndhD_p2 ccsA-ndhD 2 TGGGACCCCAAAGAAACTTG TTCTCGATGGCTTCTCTTGC 20 20 50.0 50.0 57.9 58.0 8.4 0.0 0.096390 117309 117531 793-793 1.000000 81.7 ccsA-ndhD_p3 ccsA-ndhD 3 GCCCCAAGTGCCATTTTTAC GGATTCTGGACCACGAGAAC 20 20 50.0 55.0 57.9 58.0 0.0 0.0 0.104846 117309 117531 1028-1028 1.000000 81.3 ccsA-ndhD_p4 ccsA-ndhD 4 TTTTACCCAAGGTTTCGCCA GGATTCTGGACCACGAGAAC 20 20 45.0 55.0 57.9 58.0 0.0 0.0 0.080374 117309 117531 1014-1014 0.800000 73.4 ccsA-ndhD_p5 ccsA-ndhD 5 TTTTACCCAAGGTTTCGCCA TTCTCGATGGCTTCTCTTGC 20 20 45.0 50.0 57.9 58.0 0.0 0.0 0.084570 117309 117531 1238-1238 0.800000 73.2 ndhA_p1 ndhA 1 GGAACATATTGTGGATCTCCGT ATTGGCCGATATCATGACGA 22 20 45.5 45.0 57.9 56.9 0.0 2.6 3.201683 121853 124008 2334-2353 1.000000 55.8 ndhA_p2 ndhA 2 GGAACATATTGTGGATCTCCGT TTGGCCGATATCATGACGAT 22 20 45.5 45.0 57.9 56.9 0.0 0.0 3.201683 121853 124008 2333-2352 1.000000 55.8 ndhA_p3 ndhA 3 GGAACATATTGTGGATCTCCGT AATTGGCCGATATCATGACGA 22 21 45.5 42.9 57.9 57.6 0.0 5.7 3.474326 121853 124008 2335-2354 1.000000 53.6 ndhA_p4 ndhA 4 GGAACATATTGTGGATCTCCGT TGGCCGATATCATGACGATAC 22 21 45.5 47.6 57.9 57.5 0.0 0.0 3.577120 121853 124008 2332-2351 1.000000 52.8 ndhA_p5 ndhA 5 GGAACATATTGTGGATCTCCGT TGGGAGAAGTTGATCGTTGA 22 20 45.5 45.0 57.9 56.5 0.0 0.0 3.585898 121853 124008 2290-2309 1.000000 52.8 ycf1_p1 ycf1 1 TTACGTCTTTGAGCACGCAT TTCAAGAAAAGGCAAACGCG 20 20 45.0 45.0 58.2 58.2 0.0 3.5 0.375385 129464 129583 207-267 1.000000 83.3 ycf1_p2 ycf1 2 TTATACCCCGGCGAAAATCC TTCAAGAAAAGGCAAACGCG 20 20 50.0 45.0 57.7 58.2 9.3 3.5 0.425406 129464 129583 176-236 1.000000 83.2 ycf1_p3 ycf1 3 TTTACGTCTTTGAGCACGCA TTCAAGAAAAGGCAAACGCG 20 20 45.0 45.0 58.4 58.2 0.0 3.5 0.593114 129464 129583 208-268 1.000000 81.6 ycf1_p4 ycf1 4 CCTTTGATTATACCCCGGCG TTCAAGAAAAGGCAAACGCG 20 20 55.0 45.0 58.5 58.2 0.0 3.5 0.646732 129464 129583 183-243 1.000000 81.4 ycf1_p5 ycf1 5 CTTTGATTATACCCCGGCGA TTCAAGAAAAGGCAAACGCG 20 20 50.0 45.0 57.5 58.2 9.3 3.5 0.702901 129464 129583 182-242 1.000000 80.9