Hotspot

trnT-UGU-trnL-UAA

LSC · 45111-46072 · 962 bp

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Pi 0.00842
MarkerSeek score 64.80
Primer available yes
Label trnT-UGU-trnL-UAA

Feature Metadata

Pi Curve

Haplotype Network

Species Separation

Primer Ranking

Primer ID fwd_seq rev_seq fwd_gc rev_gc fwd_tm rev_tm amplicon_size cross_species_success_rate primer_score
trnT-UGU-trnL-UAA_p1 TCAATCATGGAAAGAGCCGG ACCAATTTCGCCATATCCCC 50.0 50.0 58.0 58.0 1069-1085 bp 1.0 81.1
trnT-UGU-trnL-UAA_p2 TCAATCATGGAAAGAGCCGG TAGCGTCTACCAATTTCGCC 50.0 50.0 58.0 58.1 1077-1093 bp 1.0 80.6
trnT-UGU-trnL-UAA_p3 GCGATGCTCTAACCTCTGAG ACCAATTTCGCCATATCCCC 55.0 50.0 57.9 58.0 1012-1028 bp 1.0 80.5
trnT-UGU-trnL-UAA_p4 GCGATGCTCTAACCTCTGAG TAGCGTCTACCAATTTCGCC 55.0 50.0 57.9 58.1 1020-1036 bp 1.0 79.9
trnT-UGU-trnL-UAA_p5 GGAATCGAACCGATGACCAT ACCAATTTCGCCATATCCCC 50.0 50.0 57.8 58.0 1044-1060 bp 1.0 79.6