primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnK-UUU_p1 trnK-UUU 1 TTAGTTTTATTTGAACTTTGGT GACTCAGTTCTGCAGTGCAA 22 20 22.7 50.0 50.1 58.4 0.0 20.2 10.292866 62 2767 2808-2934 0.600000 32.2 trnK-UUU_p2 trnK-UUU 2 TTAGTTTTATTTGAACTTTGGT TTGACTCAGTTCTGCAGTGC 22 20 22.7 50.0 50.1 58.4 0.0 14.7 10.292866 62 2767 2810-2936 0.600000 32.2 trnK-UUU_p3 trnK-UUU 3 TTTAGTTTTATTTGAACTTTGGT GACTCAGTTCTGCAGTGCAA 23 20 21.7 50.0 51.1 58.4 0.0 20.2 10.323574 62 2767 2809-2935 0.600000 32.2 trnK-UUU_p4 trnK-UUU 4 TTTAGTTTTATTTGAACTTTGGT TTGACTCAGTTCTGCAGTGC 23 20 21.7 50.0 51.1 58.4 0.0 14.7 10.323574 62 2767 2811-2937 0.600000 32.2 trnK-UUU_p5 trnK-UUU 5 TTTTAGTTTTATTTGAACTTTGGT GACTCAGTTCTGCAGTGCAA 24 20 20.8 50.0 52.0 58.4 0.0 20.2 10.435294 62 2767 2810-2936 0.600000 32.2 matK-trnK-UUU_p1 matK-trnK-UUU 1 TCGCGACGAGAATGGAATTT ATCCGGGTTGCTAACTCAAC 20 20 45.0 50.0 58.0 57.9 3.7 0.0 0.114007 1895 2730 1204-1349 1.000000 90.2 matK-trnK-UUU_p2 matK-trnK-UUU 2 TCGCGACGAGAATGGAATTT AACGGTAGAGTACTCGGCTT 20 20 45.0 50.0 58.0 58.2 3.7 17.1 0.173002 1895 2730 1187-1332 1.000000 89.8 matK-trnK-UUU_p3 matK-trnK-UUU 3 TCGCGACGAGAATGGAATTT ACGGTAGAGTACTCGGCTTT 20 20 45.0 50.0 58.0 58.2 3.7 17.1 0.173002 1895 2730 1186-1331 1.000000 89.8 matK-trnK-UUU_p4 matK-trnK-UUU 4 TCGCGACGAGAATGGAATTT ATTGACAATGGCGTCTCGAA 20 20 45.0 45.0 58.0 57.9 3.7 0.0 0.097889 1895 2730 1550-1705 0.600000 72.7 matK-trnK-UUU_p5 matK-trnK-UUU 5 ACTAATCGCGACGAGAATGG ATTGACAATGGCGTCTCGAA 20 20 50.0 45.0 57.9 57.9 22.2 0.0 0.214422 1895 2730 1555-1710 0.600000 71.7 trnK-UUU-rps16_p1 trnK-UUU-rps16 1 GCGCAAAAGATCATAGTCGC CGCAAAGCAAAGACAACGAA 20 20 50.0 45.0 58.0 58.2 0.3 0.0 0.189244 2768 3463 1224-1380 0.800000 82.5 trnK-UUU-rps16_p2 trnK-UUU-rps16 2 AAGCCGAGTACTCTACCGTT GCAAAGACAACGAATTCCGG 20 20 50.0 50.0 58.2 58.0 20.3 0.0 0.204673 2768 3463 1151-1348 0.800000 82.4 trnK-UUU-rps16_p3 trnK-UUU-rps16 3 GCGCAAAAGATCATAGTCGC GCAAAGACAACGAATTCCGG 20 20 50.0 50.0 58.0 58.0 0.3 0.0 0.046833 2768 3463 1218-1374 0.600000 75.6 trnK-UUU-rps16_p4 trnK-UUU-rps16 4 TACCTCATCCAAATGCGCAA GCAAAGACAACGAATTCCGG 20 20 45.0 50.0 57.9 58.0 17.1 0.0 0.157544 2768 3463 1388-1388 0.200000 46.7 trnK-UUU-rps16_p5 trnK-UUU-rps16 5 TTACCTCATCCAAATGCGCA GCAAAGACAACGAATTCCGG 20 20 45.0 50.0 57.9 58.0 15.0 0.0 0.157544 2768 3463 1389-1389 0.200000 46.7 rps16_p1 rps16 1 TTCGAGACGCCATTGTCAAT ACGAGACTTTTTCTACGCCC 20 20 45.0 50.0 57.9 57.9 0.0 0.0 0.169285 3464 4644 2141-2141 0.200000 46.6 rps16_p2 rps16 2 GTTGAGTTAGCAACCCGGAT ACGAGACTTTTTCTACGCCC 20 20 50.0 50.0 57.9 57.9 0.7 0.0 0.185404 3464 4644 2487-2487 0.200000 46.5 rps16_p3 rps16 3 AAAGCCGAGTACTCTACCGT ACGAGACTTTTTCTACGCCC 20 20 50.0 50.0 58.2 57.9 20.3 0.0 0.244399 3464 4644 2505-2505 0.200000 46.0 rps16_p4 rps16 4 AAGCCGAGTACTCTACCGTT ACGAGACTTTTTCTACGCCC 20 20 50.0 50.0 58.2 57.9 20.3 0.0 0.244399 3464 4644 2504-2504 0.200000 46.0 rps16_p5 rps16 5 TTCGAGACGCCATTGTCAAT CGAGACTTTTTCTACGCCCT 20 20 45.0 50.0 57.9 57.6 0.0 0.0 0.458714 3464 4644 2140-2140 0.200000 44.3 rps16-trnQ-UUG_p1 rps16-trnQ-UUG 1 CCGGAATTCGTTGTCTTTGC GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 58.0 58.1 0.0 16.9 0.112354 4645 5480 1443-1627 1.000000 91.1 rps16-trnQ-UUG_p2 rps16-trnQ-UUG 2 ATCCACAGCCAATCATGTCC GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 57.9 58.1 0.0 16.9 0.139072 4645 5480 933-1129 1.000000 90.9 rps16-trnQ-UUG_p3 rps16-trnQ-UUG 3 GGCTCGAGCTCCATCATATG GAGGTTCGAATCCTTCCGTC 20 20 55.0 55.0 58.0 58.1 34.5 16.9 0.083461 4645 5480 1094-1282 0.600000 75.3 rps16-trnQ-UUG_p4 rps16-trnQ-UUG 4 CCGGAATTCGTTGTCTTTGC CCAGGGATAACCGGCATAAC 20 20 50.0 55.0 58.0 58.1 0.0 0.0 0.144044 4645 5480 2009-2117 0.600000 74.4 rps16-trnQ-UUG_p5 rps16-trnQ-UUG 5 GGCTCGAGCTCCATCATATG CCAGGGATAACCGGCATAAC 20 20 55.0 55.0 58.0 58.1 34.5 0.0 0.115151 4645 5480 1659-1660 0.400000 65.6 trnS-GCU-trnG-GCC_p1 trnS-GCU-trnG-GCC 1 TTAGTCCCCTCAGCCATCTC ACGAATCACACTTTTACCACT 20 21 55.0 38.1 58.2 55.5 0.0 0.0 3.741128 6834 7375 599-862 1.000000 61.3 trnS-GCU-trnG-GCC_p2 trnS-GCU-trnG-GCC 2 TTTAGTCCCCTCAGCCATCT ACGAATCACACTTTTACCACT 20 21 50.0 38.1 57.7 55.5 0.0 0.0 3.806276 6834 7375 600-863 1.000000 60.8 trnS-GCU-trnG-GCC_p3 trnS-GCU-trnG-GCC 3 TTAGTCCCCTCAGCCATCTC AGAACGAATCACACTTTTACCAC 20 23 55.0 39.1 58.2 57.3 0.0 0.0 3.873844 6834 7375 602-865 1.000000 60.2 trnS-GCU-trnG-GCC_p4 trnS-GCU-trnG-GCC 4 TTAGTCCCCTCAGCCATCTC GAACGAATCACACTTTTACCACT 20 23 55.0 39.1 58.2 57.3 0.0 0.0 3.873844 6834 7375 601-864 1.000000 60.2 trnS-GCU-trnG-GCC_p5 trnS-GCU-trnG-GCC 5 TTTAGTCCCCTCAGCCATCT GAACGAATCACACTTTTACCACT 20 23 50.0 39.1 57.7 57.3 0.0 0.0 3.938992 6834 7375 602-865 1.000000 59.7 rpoB-trnC-GCA_p1 rpoB-trnC-GCA 1 GCGGTCTCCATAGCAAGAAA TTATAGGTCCAGGCCCTACG 20 20 50.0 55.0 58.0 58.0 0.0 0.0 0.029546 12939 13477 1290-1290 0.200000 47.8 rpoB-trnC-GCA_p2 rpoB-trnC-GCA 2 GCGGTCTCCATAGCAAGAAA TACTTGTTTGAGCCACACCC 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.048516 12939 13477 1345-1345 0.200000 47.6 rpoB-trnC-GCA_p3 rpoB-trnC-GCA 3 TCAACAAGTCTACGCGTGAG TTATAGGTCCAGGCCCTACG 20 20 50.0 55.0 58.0 58.0 24.6 0.0 0.051653 12939 13477 1355-1355 0.200000 47.6 rpoB-trnC-GCA_p4 rpoB-trnC-GCA 4 TCAACAAGTCTACGCGTGAG TACTTGTTTGAGCCACACCC 20 20 50.0 50.0 58.0 58.0 24.6 0.0 0.070623 12939 13477 1410-1410 0.200000 47.4 rpoB-trnC-GCA_p5 rpoB-trnC-GCA 5 TTCCTTCGGACGTGTCAATC TTATAGGTCCAGGCCCTACG 20 20 50.0 55.0 57.9 58.0 0.0 0.0 0.079917 12939 13477 956-956 0.200000 47.4 trnC-GCA-trnD-GUC_p1 trnC-GCA-trnD-GUC 1 ATTTAAATTGGCGGCATGGC CCATGCATATGGCTGGGATT 20 20 45.0 50.0 58.0 58.1 14.3 0.0 0.114786 13559 14346 966-2927 1.000000 87.0 trnC-GCA-trnD-GUC_p2 trnC-GCA-trnD-GUC 2 AGTTTTTAAGCGACGGGTGT CCATGCATATGGCTGGGATT 20 20 45.0 50.0 58.0 58.1 0.0 0.0 0.109310 13559 14346 1129-2878 0.600000 69.8 trnC-GCA-trnD-GUC_p3 trnC-GCA-trnD-GUC 3 TTAAGCGACGGGTGTTTTGA CCATGCATATGGCTGGGATT 20 20 45.0 50.0 58.0 58.1 0.0 0.0 0.116150 13559 14346 1124-2873 0.600000 69.7 trnC-GCA-trnD-GUC_p4 trnC-GCA-trnD-GUC 4 GCGCAACATAGGTTAGGTCA CCATGCATATGGCTGGGATT 20 20 50.0 50.0 58.0 58.1 0.3 0.0 0.085520 13559 14346 1450-2848 0.400000 61.1 trnC-GCA-trnD-GUC_p5 trnC-GCA-trnD-GUC 5 GCGCAACATAGGTTAGGTCA AGTTCAATCGGTCAGAGCAC 20 20 50.0 50.0 58.0 57.9 0.3 0.0 0.104596 13559 14346 1428-2826 0.400000 60.9 trnD-GUC-trnY-GUA_p1 trnD-GUC-trnY-GUA 1 GTGCTCTGACCGATTGAACT CGAGATGTCTACGCTGGTTC 20 20 50.0 55.0 57.9 58.2 0.0 0.0 0.257223 14421 14707 326-363 1.000000 89.9 trnD-GUC-trnY-GUA_p2 trnD-GUC-trnY-GUA 2 GTGCTCTGACCGATTGAACT GGGGACGGACTGTAAATTCG 20 20 50.0 55.0 57.9 58.4 0.0 0.0 0.437550 14421 14707 350-387 1.000000 88.2 trnD-GUC-trnY-GUA_p3 trnD-GUC-trnY-GUA 3 GTGCTCTGACCGATTGAACT GGGACGGACTGTAAATTCGT 20 20 50.0 50.0 57.9 57.6 0.0 0.0 0.461227 14421 14707 349-386 1.000000 88.0 trnD-GUC-trnY-GUA_p4 trnD-GUC-trnY-GUA 4 GTGCTCTGACCGATTGAACT CGGACTGTAAATTCGTTGGC 20 20 50.0 50.0 57.9 57.5 0.0 0.0 0.606741 14421 14707 345-382 1.000000 86.9 trnD-GUC-trnY-GUA_p5 trnD-GUC-trnY-GUA 5 GTGCTCTGACCGATTGAACT GGACTGTAAATTCGTTGGCG 20 20 50.0 50.0 57.9 57.5 0.0 0.0 0.606741 14421 14707 344-381 1.000000 86.9 trnE-UUC-trnT-GGU_p1 trnE-UUC-trnT-GGU 1 CGTTGCCTCCTTGAAAGAGA CCATGGCGTTACTCTACCAC 20 20 50.0 55.0 57.8 58.1 0.0 0.0 0.233900 14924 15969 892-1134 1.000000 90.1 trnE-UUC-trnT-GGU_p2 trnE-UUC-trnT-GGU 2 CGTTGCCTCCTTGAAAGAGA TGGCGTTACTCTACCACTGA 20 20 50.0 50.0 57.8 58.1 0.0 0.0 0.256054 14924 15969 889-1131 1.000000 90.0 trnE-UUC-trnT-GGU_p3 trnE-UUC-trnT-GGU 3 TGTCCTGAACCACTAGACGA CCATGGCGTTACTCTACCAC 20 20 50.0 55.0 57.7 58.1 0.0 0.0 0.345606 14924 15969 870-1112 1.000000 89.2 trnE-UUC-trnT-GGU_p4 trnE-UUC-trnT-GGU 4 TGTCCTGAACCACTAGACGA TGGCGTTACTCTACCACTGA 20 20 50.0 50.0 57.7 58.1 0.0 0.0 0.367761 14924 15969 867-1109 1.000000 89.1 trnE-UUC-trnT-GGU_p5 trnE-UUC-trnT-GGU 5 CGTTGCCTCCTTGAAAGAGA ACCATGGCGTTACTCTACCA 20 20 50.0 50.0 57.8 58.4 0.0 13.0 0.605908 14924 15969 893-1135 1.000000 87.2 trnT-UGU-trnL-UAA_p1 trnT-UGU-trnL-UAA 1 TAAAACCTGGCCTGTTGACC ACCAATTTCGCCATATCCCC 20 20 50.0 50.0 58.0 58.0 3.3 0.0 0.014917 23905 24752 1469-1536 1.000000 91.9 trnT-UGU-trnL-UAA_p2 trnT-UGU-trnL-UAA 2 TAAAACCTGGCCTGTTGACC TTTGAACTGGTGACACGAGG 20 20 50.0 50.0 58.0 58.1 3.3 20.1 0.062189 23905 24752 2244-2728 1.000000 91.5 trnT-UGU-trnL-UAA_p3 trnT-UGU-trnL-UAA 3 AGAAAAAGAGCCGGCTATCG ACCAATTTCGCCATATCCCC 20 20 50.0 50.0 58.1 58.0 33.0 0.0 0.063299 23905 24752 871-949 0.800000 83.5 trnT-UGU-trnL-UAA_p4 trnT-UGU-trnL-UAA 4 GGATCCGCAAAGCAAAACTC ACCAATTTCGCCATATCCCC 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.022012 23905 24752 1189-1224 0.600000 75.8 trnT-UGU-trnL-UAA_p5 trnT-UGU-trnL-UAA 5 GGATCCGCAAAGCAAAACTC TTTGAACTGGTGACACGAGG 20 20 50.0 50.0 58.0 58.1 0.0 20.1 0.069284 23905 24752 1932-2416 0.600000 73.3 trnF-GAA-ndhJ_p1 trnF-GAA-ndhJ 1 CCTCGTGTCACCAGTTCAAA CGAAGACTGGGACTCCATTG 20 20 50.0 55.0 58.1 58.0 0.0 0.0 0.067632 25495 26058 703-1028 0.600000 71.6 trnF-GAA-ndhJ_p2 trnF-GAA-ndhJ 2 GGGGATATGGCGAAATTGGT CGAAGACTGGGACTCCATTG 20 20 50.0 55.0 58.0 58.0 0.0 0.0 0.020360 25495 26058 1411-2232 0.600000 71.3 trnF-GAA-ndhJ_p3 trnF-GAA-ndhJ 3 GGCGAAATTGGTAGACGCTA CGAAGACTGGGACTCCATTG 20 20 50.0 55.0 58.1 58.0 0.0 0.0 0.085168 25495 26058 1403-2224 0.600000 70.8 trnF-GAA-ndhJ_p4 trnF-GAA-ndhJ 4 AGGGATAGGTGCAGAGACTC CGAAGACTGGGACTCCATTG 20 20 55.0 55.0 57.9 58.0 0.0 0.0 0.096390 25495 26058 1237-2064 0.600000 70.8 trnF-GAA-ndhJ_p5 trnF-GAA-ndhJ 5 TGCAGAGACTCAATGGAAGC CGAAGACTGGGACTCCATTG 20 20 50.0 55.0 57.9 58.0 5.0 0.0 0.120742 25495 26058 1228-2055 0.600000 70.6 atpB-rbcL_p1 atpB-rbcL 1 TGCCCGGTGTAAAAATGACA GTCCACACAGTTGTCCATGT 20 20 45.0 50.0 58.0 58.0 0.0 0.0 0.050021 29402 30116 1063-1349 0.800000 83.1 atpB-rbcL_p2 atpB-rbcL 2 TGCCCGGTGTAAAAATGACA AGAAACGATCTCTCCAACGC 20 20 45.0 50.0 58.0 58.0 0.0 0.0 0.019671 29402 30116 1506-1792 0.800000 82.0 atpB-rbcL_p3 atpB-rbcL 3 TGCCCGGTGTAAAAATGACA AGAAGATTTGGCTGCTACCG 20 20 45.0 50.0 58.0 58.0 0.0 0.0 0.047178 29402 30116 1037-1283 0.600000 74.8 atpB-rbcL_p4 atpB-rbcL 4 TAGCTCTCCCAACTGGAACA AGAAACGATCTCTCCAACGC 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.026507 29402 30116 1709-1709 0.200000 47.8 atpB-rbcL_p5 atpB-rbcL 5 TAGCTCTCCCAACTGGAACA AGAAGATTTGGCTGCTACCG 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.054014 29402 30116 1240-1240 0.200000 47.6 accD-psaI_p1 accD-psaI 1 AATGCCTACATTGCGTTTGC CGACACAACGAATCCTTTGC 20 20 45.0 50.0 58.0 58.0 0.0 0.0 0.054612 33269 33762 1439-1439 0.200000 47.6 accD-psaI_p2 accD-psaI 2 TTGCCGAACCTAATGCCTAC CGACACAACGAATCCTTTGC 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.082209 33269 33762 1450-1450 0.200000 47.3 accD-psaI_p3 accD-psaI 3 AATGCCTACATTGCGTTTGC TGTGATTTGTGATTGCCGGA 20 20 45.0 45.0 58.0 58.1 0.0 5.0 0.102146 33269 33762 769-769 0.200000 47.2 accD-psaI_p4 accD-psaI 4 GTATGTGCTTCTGGAGGAGC CGACACAACGAATCCTTTGC 20 20 55.0 50.0 58.1 58.0 0.0 0.0 0.102783 33269 33762 1631-1631 0.200000 47.2 accD-psaI_p5 accD-psaI 5 ACCCGTTTGATCGAGTATGC CGACACAACGAATCCTTTGC 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.113596 33269 33762 1679-1679 0.200000 47.1 clpP-psbB_p1 clpP-psbB 1 CTTTTGGAACACCAATGGGC CGATACCAAGGCAAACCCAT 20 20 50.0 50.0 57.8 58.2 3.6 0.0 0.405618 42164 42793 672-1047 1.000000 87.7 clpP-psbB_p2 clpP-psbB 2 TTTGGAACACCAATGGGCAT CGATACCAAGGCAAACCCAT 20 20 45.0 50.0 58.3 58.2 3.6 0.0 0.510230 42164 42793 670-1045 1.000000 86.8 clpP-psbB_p3 clpP-psbB 3 TCCAGGACTCCGAAAAGGTA CGATACCAAGGCAAACCCAT 20 20 50.0 50.0 57.7 58.2 0.0 0.0 0.551363 42164 42793 692-1067 1.000000 86.4 clpP-psbB_p4 clpP-psbB 4 CCAGGACTCCGAAAAGGTAC CGATACCAAGGCAAACCCAT 20 20 55.0 50.0 57.6 58.2 0.0 0.0 0.619017 42164 42793 691-1066 1.000000 85.9 clpP-psbB_p5 clpP-psbB 5 CTTTTGGAACACCAATGGGC ACACGATACCAAGGCAAACC 20 20 50.0 50.0 57.8 58.5 3.6 0.0 0.638003 42164 42793 675-1050 1.000000 85.8 ndhG-ccsA_p1 ndhG-ccsA 1 TTGTGGACCATTGGCGATAG TCGTTGGATTTCTTCGGGAC 20 20 50.0 50.0 58.0 57.9 1.5 0.0 0.125907 82278 82823 1060-1060 0.200000 47.0 ndhG-ccsA_p2 ndhG-ccsA 2 CCTTTCCTGGACCCTCAGTA TCGTTGGATTTCTTCGGGAC 20 20 55.0 50.0 58.0 57.9 0.0 0.0 0.136328 82278 82823 1401-1401 0.200000 46.9 ndhG-ccsA_p3 ndhG-ccsA 3 TTCCTGGACCCTCAGTAAGG TCGTTGGATTTCTTCGGGAC 20 20 55.0 50.0 58.0 57.9 0.0 0.0 0.136328 82278 82823 1398-1398 0.200000 46.9 ndhG-ccsA_p4 ndhG-ccsA 4 CGATAGGATCACCTCGCTTG TCGTTGGATTTCTTCGGGAC 20 20 55.0 50.0 57.9 57.9 0.0 0.0 0.146453 82278 82823 1046-1046 0.200000 46.8 ndhG-ccsA_p5 ndhG-ccsA 5 TTGTGGACCATTGGCGATAG TAGACACGCTGCTCTTAGGA 20 20 50.0 50.0 58.0 57.9 1.5 0.0 0.161235 82278 82823 1392-1392 0.200000 46.7 trnL-UAG-rpl32_p1 trnL-UAG-rpl32 1 GTCCCGAAGAAATCCAACGA TCCACCGGACAGTCAAAAAG 20 20 50.0 50.0 57.9 58.0 0.0 9.5 0.127156 83425 84000 967-1095 1.000000 91.0 trnL-UAG-rpl32_p2 trnL-UAG-rpl32 2 TCCTAAGAGCAGCGTGTCTA TCCACCGGACAGTCAAAAAG 20 20 50.0 50.0 57.9 58.0 0.0 9.5 0.162484 83425 84000 622-750 1.000000 90.7 trnL-UAG-rpl32_p3 trnL-UAG-rpl32 3 TCCTAAGAGCAGCGTGTCTA CAACATTCTCCATAGGGCCC 20 20 50.0 55.0 57.9 58.0 0.0 16.5 0.137395 83425 84000 1206-2792 0.400000 60.8 trnL-UAG-rpl32_p4 trnL-UAG-rpl32 4 GTCCCGAAGAAATCCAACGA CAACATTCTCCATAGGGCCC 20 20 50.0 55.0 57.9 58.0 0.0 16.5 0.102067 83425 84000 1538-1538 0.200000 47.2 trnL-UAG-rpl32_p5 trnL-UAG-rpl32 5 GTCCCGAAGAAATCCAACGA GCTCGGGTTATGGAAGAAGG 20 20 50.0 55.0 57.9 58.0 0.0 0.0 0.134023 83425 84000 1497-1497 0.200000 46.9