primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnS-GCU-trnG-GCC_p1 trnS-GCU-trnG-GCC 1 ATTAGCAATCCGCCGCTTTA CGAACGAATCACACTTTTACCA 20 22 45.0 40.9 58.0 57.3 0.0 0.0 2.757064 8571 9834 1237-1341 1.000000 69.5 trnS-GCU-trnG-GCC_p2 trnS-GCU-trnG-GCC 2 ATTAGCAATCCGCCGCTTTA TCGAACGAATCACACTTTTACC 20 22 45.0 40.9 58.0 57.0 0.0 0.0 3.015948 8571 9834 1238-1342 1.000000 67.5 trnS-GCU-trnG-GCC_p3 trnS-GCU-trnG-GCC 3 GCTTTAGTCCACTCAGCCAT CGAACGAATCACACTTTTACCA 20 22 50.0 40.9 57.6 57.3 0.9 0.0 3.128806 8571 9834 1223-1327 1.000000 66.6 trnS-GCU-trnG-GCC_p4 trnS-GCU-trnG-GCC 4 AGTCCACTCAGCCATCTCTC CGAACGAATCACACTTTTACCA 20 22 55.0 40.9 58.5 57.3 0.0 0.0 3.234820 8571 9834 1218-1322 1.000000 65.8 trnS-GCU-trnG-GCC_p5 trnS-GCU-trnG-GCC 5 GATTCGAACCCTCGGTACAA CGAACGAATCACACTTTTACCA 20 22 50.0 40.9 57.3 57.3 0.0 0.0 3.379046 8571 9834 1273-1377 1.000000 64.3 atpF_p1 atpF 1 CCGAGATTCAGAAGCGGAAA GGGCTGATTTGAGGATGAGG 20 20 50.0 55.0 58.0 58.0 13.8 0.0 0.031691 12522 14026 2223-2319 1.000000 87.1 atpF_p2 atpF 2 CCGAGATTCAGAAGCGGAAA CTCGTTGCCATTTGCTTCTG 20 20 50.0 50.0 58.0 58.0 13.8 0.0 0.037007 12522 14026 2303-2400 1.000000 87.1 atpF_p3 atpF 3 CCGAGATTCAGAAGCGGAAA ATTTATGGACTGGTCGTGGC 20 20 50.0 50.0 58.0 58.0 13.8 0.0 0.048532 12522 14026 2427-2524 1.000000 87.1 atpF_p4 atpF 4 AAATAAGCCTCGCTCACTGG GGGCTGATTTGAGGATGAGG 20 20 50.0 55.0 58.0 58.0 0.0 0.0 0.051384 12522 14026 2153-2249 0.857143 81.2 atpF_p5 atpF 5 CCAAATAAGCCTCGCTCACT GGGCTGATTTGAGGATGAGG 20 20 50.0 55.0 58.0 58.0 0.0 0.0 0.051384 12522 14026 2155-2251 0.857143 81.2 atpF-atpH_p1 atpF-atpH 1 CATATTGTGCCCGGACTTCA ATTTATGGACTGGTCGTGGC 20 20 50.0 50.0 58.0 58.0 0.7 0.0 0.075344 14027 14522 1041-1122 0.857143 82.8 atpF-atpH_p2 atpF-atpH 2 CATATTGTGCCCGGACTTCA AAGCCGTAGAAGGTATTGCG 20 20 50.0 50.0 58.0 58.1 0.7 0.0 0.101025 14027 14522 1133-1214 0.857143 82.2 atpF-atpH_p3 atpF-atpH 3 CATATTGTGCCCGGACTTCA CAATATAAAATGCGCGCGGT 20 20 50.0 45.0 58.0 58.0 0.7 33.1 0.067994 14027 14522 1458-1555 0.857143 81.7 atpF-atpH_p4 atpF-atpH 4 CATATTGTGCCCGGACTTCA CCAATTGAGGCAATGCATGG 20 20 50.0 50.0 58.0 58.1 0.7 7.8 0.088853 14027 14522 1685-1800 0.857143 81.6 atpF-atpH_p5 atpF-atpH 5 CATATTGTGCCCGGACTTCA CCCAATTGAGGCAATGCATG 20 20 50.0 50.0 58.0 58.1 0.7 7.8 0.088853 14027 14522 1686-1801 0.857143 81.6 rpoB-trnC-GCA_p1 rpoB-trnC-GCA 1 TCCCTCATTTCCATTCCGGA TAAAGGATTTGCAGTCCCCC 20 20 50.0 50.0 58.4 57.5 0.0 14.6 0.934514 27554 28798 1283-1313 1.000000 79.5 rpoB-trnC-GCA_p2 rpoB-trnC-GCA 2 TTCCCTCATTTCCATTCCGG TAAAGGATTTGCAGTCCCCC 20 20 50.0 50.0 57.6 57.5 0.0 14.6 0.960477 27554 28798 1284-1314 1.000000 79.3 rpoB-trnC-GCA_p3 rpoB-trnC-GCA 3 TCCCTCATTTCCATTCCGGA TTTGTTGATCAGGCGACACC 20 20 50.0 50.0 58.4 58.8 0.0 0.0 1.174588 27554 28798 1320-1350 1.000000 77.4 rpoB-trnC-GCA_p4 rpoB-trnC-GCA 4 TTCCCTCATTTCCATTCCGG TTTGTTGATCAGGCGACACC 20 20 50.0 50.0 57.6 58.8 0.0 0.0 1.200551 27554 28798 1321-1351 1.000000 77.2 rpoB-trnC-GCA_p5 rpoB-trnC-GCA 5 TCCCTCATTTCCATTCCGGA GACACCCGGATTTGAACTGG 20 20 50.0 55.0 58.4 58.8 0.0 0.7 1.244140 27554 28798 1306-1336 1.000000 76.9 trnC-GCA-petN_p1 trnC-GCA-petN 1 GGGGGACTGCAAATCCTTTA CAGCCCAAGCAAGACTTACT 20 20 50.0 50.0 57.5 57.8 14.7 0.0 0.716233 28870 29930 1100-1146 1.000000 82.5 trnC-GCA-petN_p2 trnC-GCA-petN 2 CCAGTTCAAATCCGGGTGTC CAGCCCAAGCAAGACTTACT 20 20 55.0 50.0 58.8 57.8 0.0 0.0 1.025858 28870 29930 1077-1123 1.000000 80.2 trnC-GCA-petN_p3 trnC-GCA-petN 3 TATCCCCAGTTCAAATCCGG CAGCCCAAGCAAGACTTACT 20 20 50.0 50.0 57.0 57.8 0.0 0.0 1.212353 28870 29930 1082-1128 1.000000 78.6 trnC-GCA-petN_p4 trnC-GCA-petN 4 AATTTATTTGGCGGCATGGC CAGCCCAAGCAAGACTTACT 20 20 45.0 50.0 58.0 57.8 14.3 0.0 0.238935 28870 29930 1169-1169 0.142857 43.8 trnC-GCA-petN_p5 trnC-GCA-petN 5 AATTTATTTGGCGGCATGGC GCAGCCCAAGCAAGACTTA 20 19 45.0 52.6 58.0 58.1 14.3 0.0 1.100861 28870 29930 1170-1170 0.142857 36.9 petN-psbM_p1 petN-psbM 1 AGTATGGGGAAGGAGTGGAC AAAACAGTCAGCCAAAATGA 20 20 55.0 35.0 58.1 53.9 0.0 0.0 4.237493 30021 30880 909-1019 1.000000 52.8 petN-psbM_p2 petN-psbM 2 GTATGGGGAAGGAGTGGACT AAAACAGTCAGCCAAAATGA 20 20 55.0 35.0 58.1 53.9 0.0 0.0 4.237493 30021 30880 908-1018 1.000000 52.8 petN-psbM_p3 petN-psbM 3 TATGGGGAAGGAGTGGACTC AAAACAGTCAGCCAAAATGA 20 20 55.0 35.0 57.8 53.9 0.0 0.0 4.294681 30021 30880 907-1017 1.000000 52.4 petN-psbM_p4 petN-psbM 4 AGTATGGGGAAGGAGTGGAC TGTAAAAACAGTCAGCCAAAATGA 20 24 55.0 33.3 58.1 57.8 0.0 0.0 4.333250 30021 30880 913-1023 1.000000 52.0 petN-psbM_p5 petN-psbM 5 GTATGGGGAAGGAGTGGACT TGTAAAAACAGTCAGCCAAAATGA 20 24 55.0 33.3 58.1 57.8 0.0 0.0 4.333250 30021 30880 912-1022 1.000000 52.0 trnT-GGU-psbD_p1 trnT-GGU-psbD 1 GTGGTAGAGTAACGCCATGG GCCTACAAAAACGAAACGGT 20 20 55.0 45.0 58.1 57.2 7.6 0.0 0.825460 33414 34498 1224-1245 1.000000 78.6 trnT-GGU-psbD_p2 trnT-GGU-psbD 2 TCAGTGGTAGAGTAACGCCA GCCTACAAAAACGAAACGGT 20 20 50.0 45.0 58.1 57.2 0.0 0.0 0.847614 33414 34498 1227-1248 1.000000 78.4 trnT-GGU-psbD_p3 trnT-GGU-psbD 3 GGCGTAAGTCATCGGTTCAA GCCTACAAAAACGAAACGGT 20 20 50.0 45.0 58.3 57.2 0.0 0.0 1.044199 33414 34498 1201-1222 1.000000 77.0 trnT-GGU-psbD_p4 trnT-GGU-psbD 4 GTGGTAGAGTAACGCCATGG AGCCTACAAAAACGAAACGG 20 20 55.0 45.0 58.1 56.9 7.6 0.0 1.115020 33414 34498 1225-1246 1.000000 76.3 trnT-GGU-psbD_p5 trnT-GGU-psbD 5 TCAGTGGTAGAGTAACGCCA AGCCTACAAAAACGAAACGG 20 20 50.0 45.0 58.1 56.9 0.0 0.0 1.137175 33414 34498 1228-1249 1.000000 76.1 psbC-trnS-UGA_p1 psbC-trnS-UGA 1 TCTAAGGGGTCCCAATGGTT ACCATTTGATCCCTCGCTTC 20 20 50.0 50.0 57.9 58.0 11.0 0.0 0.112954 36930 37056 827-839 1.000000 82.7 psbC-trnS-UGA_p2 psbC-trnS-UGA 2 TCTAAGGGGTCCCAATGGTT TGGATCGGGAAAATGCCAAA 20 20 50.0 45.0 57.9 58.1 11.0 0.0 0.138581 36930 37056 1077-1089 1.000000 82.0 psbC-trnS-UGA_p3 psbC-trnS-UGA 3 TCTAAGGGGTCCCAATGGTT TTGGATCGGGAAAATGCCAA 20 20 50.0 45.0 57.9 58.1 11.0 0.0 0.138581 36930 37056 1078-1090 1.000000 82.0 psbC-trnS-UGA_p4 psbC-trnS-UGA 4 TCTAAGGGGTCCCAATGGTT TTTGGATCGGGAAAATGCCA 20 20 50.0 45.0 57.9 58.1 11.0 0.0 0.138581 36930 37056 1079-1091 1.000000 82.0 psbC-trnS-UGA_p5 psbC-trnS-UGA 5 TCTAAGGGGTCCCAATGGTT GGTTGATAGCTCCGGTCTTG 20 20 50.0 55.0 57.9 58.1 11.0 0.0 0.127506 36930 37056 517-519 1.000000 81.8 trnT-UGU-trnL-UAA_p1 trnT-UGU-trnL-UAA 1 TAAAACCTGGCCTGTTGACC ACCAATTTCGCCATATCCCC 20 20 50.0 50.0 58.0 58.0 3.3 0.0 0.014917 48050 49050 1637-1704 1.000000 88.9 trnT-UGU-trnL-UAA_p2 trnT-UGU-trnL-UAA 2 CGAAGCCATACCCAATCGAA ACCAATTTCGCCATATCCCC 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.056519 48050 49050 1694-1761 1.000000 88.4 trnT-UGU-trnL-UAA_p3 trnT-UGU-trnL-UAA 3 TAAAACCTGGCCTGTTGACC GATAGCCAGTTACCAACGCA 20 20 50.0 50.0 58.0 58.0 3.3 0.0 0.028836 48050 49050 1865-1932 1.000000 88.1 trnT-UGU-trnL-UAA_p4 trnT-UGU-trnL-UAA 4 CGAAGCCATACCCAATCGAA GATAGCCAGTTACCAACGCA 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.070438 48050 49050 1922-1989 1.000000 87.6 trnT-UGU-trnL-UAA_p5 trnT-UGU-trnL-UAA 5 TAAAACCTGGCCTGTTGACC TAGCGTCTACCAATTTCGCC 20 20 50.0 50.0 58.0 58.1 3.3 0.0 0.079726 48050 49050 1645-1712 0.857143 81.1 atpB-rbcL_p1 atpB-rbcL 1 ACCGGAAGTAGTAGGATTGGT AGTCTCTGTTTGTGGTGACA 21 20 47.6 45.0 57.9 56.6 9.5 0.0 2.483437 56954 57871 956-980 1.000000 68.5 atpB-rbcL_p2 atpB-rbcL 2 ACCGGAAGTAGTAGGATTGGT AGTCTCTGTTTGTGGTGACAT 21 21 47.6 42.9 57.9 57.2 9.5 0.0 2.957522 56954 57871 956-980 1.000000 64.7 atpB-rbcL_p3 atpB-rbcL 3 ACCGGAAGTAGTAGGATTGGT TGCTTTAGTCTCTGTTTGTGGT 21 22 47.6 40.9 57.9 57.8 9.5 0.0 3.262638 56954 57871 962-986 1.000000 62.3 atpB-rbcL_p4 atpB-rbcL 4 ACCGGAAGTAGTAGGATTGG AGTCTCTGTTTGTGGTGACA 20 20 50.0 45.0 56.0 56.6 9.5 0.0 3.332103 56954 57871 956-980 1.000000 61.8 atpB-rbcL_p5 atpB-rbcL 5 CCGGAAGTAGTAGGATTGGT AGTCTCTGTTTGTGGTGACA 20 20 50.0 45.0 56.0 56.6 0.0 0.0 3.332103 56954 57871 955-979 1.000000 61.8 rpl22-rps19_p1 rpl22-rps19 1 ACAAAAGGACCTCCGTTGAC TCTGACTTTCGCGAGACATG 20 20 50.0 50.0 58.0 58.0 15.8 9.6 0.054216 86023 86076 367-372 0.857143 79.1 rpl22-rps19_p2 rpl22-rps19 2 CACAAAAGGACCTCCGTTGA TCTGACTTTCGCGAGACATG 20 20 50.0 50.0 58.0 58.0 15.8 9.6 0.055594 86023 86076 368-373 0.857143 79.0 rpl22-rps19_p3 rpl22-rps19 3 TCACAAAAGGACCTCCGTTG TCTGACTTTCGCGAGACATG 20 20 50.0 50.0 58.0 58.0 0.0 9.6 0.055594 86023 86076 369-374 0.857143 79.0 rpl22-rps19_p4 rpl22-rps19 4 ACAAAAGGACCTCCGTTGAC GTTATCCTGCGCTTGGAAGA 20 20 50.0 50.0 58.0 58.0 15.8 22.4 0.061004 86023 86076 932-937 0.857143 76.2 rpl22-rps19_p5 rpl22-rps19 5 CACAAAAGGACCTCCGTTGA GTTATCCTGCGCTTGGAAGA 20 20 50.0 50.0 58.0 58.0 15.8 22.4 0.062382 86023 86076 933-938 0.857143 76.2 ndhF_p1 ndhF 1 TATTGCAATTCCCCGAGTGG TTTGTTCCCTTCGAAAGCGA 20 20 50.0 45.0 57.9 58.0 18.7 0.0 0.095038 114601 116814 2591-2612 0.571429 64.1 ndhF_p2 ndhF 2 GGAAGGGAAGCAGAACTAGC TTTGTTCCCTTCGAAAGCGA 20 20 55.0 45.0 58.0 58.0 0.0 0.0 0.074962 114601 116814 2349-2358 0.428571 57.6 ndhF_p3 ndhF 3 GGAAGGGAAGCAGAACTAGC CAGTTCCGCAATGAGTCAGA 20 20 55.0 50.0 58.0 57.9 0.0 0.0 0.115868 114601 116814 2751-2764 0.428571 57.6 ndhF_p4 ndhF 4 GGAAGGGAAGCAGAACTAGC TCAGTTCCGCAATGAGTCAG 20 20 55.0 50.0 58.0 57.9 0.0 0.0 0.115868 114601 116814 2752-2765 0.428571 57.5 ndhF_p5 ndhF 5 AACTAGCTTTTGGGTCTGCC TTTGTTCCCTTCGAAAGCGA 20 20 50.0 45.0 58.1 58.0 0.0 0.0 0.132646 114601 116814 2341-2341 0.142857 44.7 ndhF-rpl32_p1 ndhF-rpl32 1 ACTGGAAACGGAAGAAAAGGT AGAAAAAGCTTTTATGGCAGC 21 21 42.9 38.1 57.7 55.6 0.0 24.1 4.647967 116815 117737 906-1075 1.000000 51.1 ndhF-rpl32_p2 ndhF-rpl32 2 ACTGGAAACGGAAGAAAAGGT AAGAAAAAGCTTTTATGGCAGC 21 22 42.9 36.4 57.7 56.4 0.0 24.1 4.903293 116815 117737 907-1076 1.000000 49.1 ndhF-rpl32_p3 ndhF-rpl32 3 ACTGGAAACGGAAGAAAAGGT GAAAAAGCTTTTATGGCAGC 21 20 42.9 40.0 57.7 54.1 0.0 24.1 5.215987 116815 117737 905-1074 1.000000 48.3 ndhF-rpl32_p4 ndhF-rpl32 4 ACTGGAAACGGAAGAAAAGGT AAAGAAAAAGCTTTTATGGCAGC 21 23 42.9 34.8 57.7 57.1 0.0 24.1 5.222189 116815 117737 908-1077 1.000000 48.3 ndhF-rpl32_p5 ndhF-rpl32 5 ACTGGAAACGGAAGAAAAGGT AGAAAAAGCTTTTATGGCAGCTA 21 23 42.9 34.8 57.7 57.0 0.0 24.1 5.275382 116815 117737 906-1075 1.000000 48.3 rpl32-trnL-UAG_p1 rpl32-trnL-UAG 1 ACAAACAAGTAAGAAAATCTTGGA TCCTAAGAGCAGCGTGTCTA 24 20 29.2 50.0 55.1 57.9 2.9 0.0 6.976329 117912 118696 768-860 1.000000 48.4 rpl32-trnL-UAG_p2 rpl32-trnL-UAG 2 ACAAACAAGTAAGAAAATCTTGGA AGCAGCGTGTCTACCAATTT 24 20 29.2 45.0 55.1 57.8 2.9 0.0 7.037056 117912 118696 761-853 1.000000 48.4 rpl32-trnL-UAG_p3 rpl32-trnL-UAG 3 ACAAACAAGTAAGAAAATCTTGGA CCTAAGAGCAGCGTGTCTAC 24 20 29.2 55.0 55.1 57.8 2.9 0.0 7.048347 117912 118696 767-859 1.000000 48.4 rpl32-trnL-UAG_p4 rpl32-trnL-UAG 4 ACAAACAAGTAAGAAAATCTTGGA CTAAGAGCAGCGTGTCTACC 24 20 29.2 55.0 55.1 57.8 2.9 0.0 7.048347 117912 118696 766-858 1.000000 48.4 rpl32-trnL-UAG_p5 rpl32-trnL-UAG 5 ACAAACAAGTAAGAAAATCTTGGA GAGCAGCGTGTCTACCAATT 24 20 29.2 50.0 55.1 58.3 2.9 0.0 7.125199 117912 118696 762-854 1.000000 48.4 ccsA-ndhD_p1 ccsA-ndhD 1 ACCTGCCCTACAATCTCAGT TTCTCGATGGCTTCTCTTGC 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.057448 119821 120013 1133-1133 1.000000 83.4 ccsA-ndhD_p2 ccsA-ndhD 2 ACCTGCCCTACAATCTCAGT CTCGATGGCTTCTCTTGCAT 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.090884 119821 120013 1131-1131 1.000000 83.1 ccsA-ndhD_p3 ccsA-ndhD 3 ACCTGCCCTACAATCTCAGT TTCTTGGTGGGAACGAGTTG 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.079918 119821 120013 1235-1235 1.000000 82.9 ccsA-ndhD_p4 ccsA-ndhD 4 TTTTACCCAAGGTTTCGCCA TTCTCGATGGCTTCTCTTGC 20 20 45.0 50.0 57.9 58.0 0.0 0.0 0.084570 119821 120013 1196-1196 0.857143 77.1 ccsA-ndhD_p5 ccsA-ndhD 5 ACCTGCCCTACAATCTCAGT TGTCCCTGGTTGGTGATAGT 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.080575 119821 120013 1445-1445 0.857143 76.5 ycf1_p1 ycf1 1 TTCGCCACTTTTTCGCTACT TATTGCAATTCCCCGAGTGG 20 20 45.0 50.0 58.1 57.9 0.0 18.7 0.177637 130835 130954 1239-1347 0.857143 80.1 ycf1_p2 ycf1 2 TTCGCCACTTTTTCGCTACT GGAAGGGAAGCAGAACTAGC 20 20 45.0 55.0 58.1 58.0 0.0 0.0 0.157561 130835 130954 985-994 0.571429 65.9 ycf1_p3 ycf1 3 AGTTGTGCATTGATCCTCGG GGAAGGGAAGCAGAACTAGC 20 20 50.0 55.0 58.3 58.0 0.0 0.0 0.288497 130835 130954 629-638 0.571429 65.7 ycf1_p4 ycf1 4 TTCGCCACTTTTTCGCTACT GTCTGAAACCTTGGCGAAGA 20 20 45.0 50.0 58.1 58.1 0.0 10.4 0.247349 130835 130954 1086-1095 0.571429 64.8 ycf1_p5 ycf1 5 TTCGCCACTTTTTCGCTACT AACTAGCTTTTGGGTCTGCC 20 20 45.0 50.0 58.1 58.1 0.0 0.0 0.215245 130835 130954 981-981 0.142857 44.0