Hotspot

rps4-trnT-UGU

LSC · 42479-42940 · 462 bp

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Pi 0.067
MarkerSeek score 75.60
Primer available yes
Label rps4-trnT-UGU

Feature Metadata

Pi Curve

Haplotype Network

Species Separation

Primer Ranking

Primer ID fwd_seq rev_seq fwd_gc rev_gc fwd_tm rev_tm amplicon_size cross_species_success_rate primer_score
rps4-trnT-UGU_p1 TTTTCCGGCGATATGAACGT ACCAATTTCGCCATATCCCC 45.0 50.0 58.0 58.0 1292-1317 bp 1.0 88.2
rps4-trnT-UGU_p2 TGCTTTTCCGGCGATATGAA ACCAATTTCGCCATATCCCC 45.0 50.0 58.0 58.0 1295-1320 bp 1.0 88.0
rps4-trnT-UGU_p3 TTGCTTTTCCGGCGATATGA ACCAATTTCGCCATATCCCC 45.0 50.0 58.0 58.0 1296-1321 bp 1.0 88.0
rps4-trnT-UGU_p4 TTTTCCGGCGATATGAACGT TAGCGTCTACCAATTTCGCC 45.0 50.0 58.0 58.1 1300-1325 bp 1.0 87.6
rps4-trnT-UGU_p5 CCAACCGCATTTCAAGCAAT ACCAATTTCGCCATATCCCC 45.0 50.0 57.9 58.0 1344-1369 bp 1.0 87.4