primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnK-UUU-rps16_p1 trnK-UUU-rps16 1 AGCCGAGTACTCTACCATTGA AAGGCGGGTGTTTTTATGGA 21 20 47.6 45.0 58.0 57.7 20.3 0.0 1.310376 4474 6253 1811-1866 1.000000 81.5 trnK-UUU-rps16_p2 trnK-UUU-rps16 2 AGCCGAGTACTCTACCATTGA AGGCGGGTGTTTTTATGGAA 21 20 47.6 45.0 58.0 57.7 20.3 0.0 1.310376 4474 6253 1810-1865 1.000000 81.5 trnK-UUU-rps16_p3 trnK-UUU-rps16 3 AGCCGAGTACTCTACCATTGA GGCGGGTGTTTTTATGGAAC 21 20 47.6 50.0 58.0 57.6 20.3 0.0 1.371631 4474 6253 1809-1864 1.000000 81.0 trnK-UUU-rps16_p4 trnK-UUU-rps16 4 GCCGAGTACTCTACCATTGAG AAGGCGGGTGTTTTTATGGA 21 20 52.4 45.0 57.6 57.7 20.3 0.0 1.653238 4474 6253 1810-1865 1.000000 78.8 trnK-UUU-rps16_p5 trnK-UUU-rps16 5 GCCGAGTACTCTACCATTGAG AGGCGGGTGTTTTTATGGAA 21 20 52.4 45.0 57.6 57.7 20.3 0.0 1.653238 4474 6253 1809-1864 1.000000 78.8 trnG-UCC-trnR-UCU_p1 trnG-UCC-trnR-UCU 1 AGCCTTCCAAGCTAACGATG AGAAGACCTCTGTCCTATCCA 20 21 50.0 47.6 58.0 56.9 0.0 0.0 2.081443 12243 12693 491-531 1.000000 74.4 trnG-UCC-trnR-UCU_p2 trnG-UCC-trnR-UCU 2 CCTAGCCTTCCAAGCTAACG AGAAGACCTCTGTCCTATCCA 20 21 55.0 47.6 58.1 56.9 0.0 0.0 2.110280 12243 12693 494-534 1.000000 74.1 trnG-UCC-trnR-UCU_p3 trnG-UCC-trnR-UCU 3 AGCCTTCCAAGCTAACGATG AGGTTTAGAAGACCTCTGTCCT 20 22 50.0 45.5 58.0 57.9 0.0 0.0 2.164771 12243 12693 497-537 1.000000 73.6 trnG-UCC-trnR-UCU_p4 trnG-UCC-trnR-UCU 4 CCTAGCCTTCCAAGCTAACG AGGTTTAGAAGACCTCTGTCCT 20 22 55.0 45.5 58.1 57.9 0.0 0.0 2.193608 12243 12693 500-540 1.000000 73.4 trnG-UCC-trnR-UCU_p5 trnG-UCC-trnR-UCU 5 ACCAAAGTTTCACGTTCGGT AGAAGACCTCTGTCCTATCCA 20 21 45.0 47.6 58.3 56.9 0.0 0.0 2.310076 12243 12693 561-601 1.000000 71.7 psbZ-trnG-GCC_p1 psbZ-trnG-GCC 1 CTTCTCCTGATGGTTGGTCG CGTCTTCTCCTTGGCAAAGA 20 20 55.0 50.0 58.0 57.8 0.0 1.1 0.185568 40809 41408 754-2450 1.000000 81.8 psbZ-trnG-GCC_p2 psbZ-trnG-GCC 2 TTGCTTCTCCTGATGGTTGG CGTCTTCTCCTTGGCAAAGA 20 20 50.0 50.0 57.8 57.8 0.0 1.1 0.374855 40809 41408 757-2453 1.000000 80.2 psbZ-trnG-GCC_p3 psbZ-trnG-GCC 3 TCCTGATGGTTGGTCGAGTA CGTCTTCTCCTTGGCAAAGA 20 20 50.0 50.0 57.8 57.8 0.0 1.1 0.395214 40809 41408 750-2446 1.000000 80.1 psbZ-trnG-GCC_p4 psbZ-trnG-GCC 4 GCTTCTCCTGATGGTTGGTC CGTCTTCTCCTTGGCAAAGA 20 20 55.0 50.0 58.3 57.8 0.0 1.1 0.425837 40809 41408 755-2451 1.000000 79.8 psbZ-trnG-GCC_p5 psbZ-trnG-GCC 5 TTCTCCTGATGGTTGGTCGA CGTCTTCTCCTTGGCAAAGA 20 20 50.0 50.0 58.4 57.8 0.0 1.1 0.530110 40809 41408 753-2449 1.000000 79.0 trnT-UGU-trnL-UAA_p1 trnT-UGU-trnL-UAA 1 GCGATGCTCTAACCTCTGAG ACCAATTTCGCCATATCCCC 20 20 55.0 50.0 57.9 58.0 0.0 0.0 0.137364 51335 52764 1426-1480 1.000000 89.3 trnT-UGU-trnL-UAA_p2 trnT-UGU-trnL-UAA 2 GCGATGCTCTAACCTCTGAG TAGCGTCTACCAATTTCGCC 20 20 55.0 50.0 57.9 58.1 0.0 0.0 0.202173 51335 52764 1434-1488 1.000000 88.8 trnT-UGU-trnL-UAA_p3 trnT-UGU-trnL-UAA 3 GGAATCGAACCGATGACCAT ACCAATTTCGCCATATCCCC 20 20 50.0 50.0 57.8 58.0 15.5 0.0 0.245117 51335 52764 1458-1512 1.000000 88.3 trnT-UGU-trnL-UAA_p4 trnT-UGU-trnL-UAA 4 GGAATCGAACCGATGACCAT TAGCGTCTACCAATTTCGCC 20 20 50.0 50.0 57.8 58.1 15.5 0.0 0.309926 51335 52764 1466-1520 1.000000 87.8 trnT-UGU-trnL-UAA_p5 trnT-UGU-trnL-UAA 5 GCGATGCTCTAACCTCTGAG AGTCCGTAGCGTCTACCAAT 20 20 55.0 50.0 57.9 58.2 0.0 10.2 0.372548 51335 52764 1440-1494 1.000000 87.4 ndhC-trnV-UAC_p1 ndhC-trnV-UAC 1 GGCTCGATATTATTAGAAATGCCC AGAAGGTCTACGGTTCGAGT 24 20 41.7 50.0 57.6 57.8 0.0 0.0 4.562228 56140 57153 1102-1329 1.000000 54.7 ndhC-trnV-UAC_p2 ndhC-trnV-UAC 2 GGCTCGATATTATTAGAAATGCCC GAAGGTCTACGGTTCGAGTC 24 20 41.7 55.0 57.6 57.5 0.0 0.0 4.906000 56140 57153 1101-1328 1.000000 51.9 ndhC-trnV-UAC_p3 ndhC-trnV-UAC 3 GGCTCGATATTATTAGAAATGCCC GTTCGAGTCCGTATAGCCCT 24 20 41.7 55.0 57.6 58.7 0.0 0.0 5.048294 56140 57153 1090-1317 1.000000 51.2 ndhC-trnV-UAC_p4 ndhC-trnV-UAC 4 GCTCGATATTATTAGAAATGCCCA AGAAGGTCTACGGTTCGAGT 24 20 37.5 50.0 57.0 57.8 0.0 0.0 5.182471 56140 57153 1101-1328 1.000000 51.2 ndhC-trnV-UAC_p5 ndhC-trnV-UAC 5 GGCTCGATATTATTAGAAATGCCC AAGGTCTACGGTTCGAGTCC 24 20 41.7 55.0 57.6 58.8 0.0 0.0 5.192770 56140 57153 1100-1327 1.000000 51.2 ycf4-cemA_p1 ycf4-cemA 1 TTGGCCTATTTCTTGCGTGT AATGCGAAAGAGATGCACCA 20 20 45.0 45.0 58.1 58.2 3.3 0.0 0.270623 66313 66792 593-599 1.000000 85.1 ycf4-cemA_p2 ycf4-cemA 2 AAAAAGCTGCAGAATTGGCC AATGCGAAAGAGATGCACCA 20 20 45.0 45.0 57.8 58.2 20.4 0.0 0.349273 66313 66792 607-613 1.000000 84.3 ycf4-cemA_p3 ycf4-cemA 3 AAAGCTGCAGAATTGGCCTA AATGCGAAAGAGATGCACCA 20 20 45.0 45.0 57.8 58.2 20.4 0.0 0.395562 66313 66792 605-611 1.000000 83.9 ycf4-cemA_p4 ycf4-cemA 4 TTGGCCTATTTCTTGCGTGT GCACCAGGGCAAAAAGACTA 20 20 45.0 50.0 58.1 58.4 3.3 0.0 0.479555 66313 66792 579-585 1.000000 83.6 ycf4-cemA_p5 ycf4-cemA 5 GCCATTCCCTTGACTCGTAC AATGCGAAAGAGATGCACCA 20 20 55.0 45.0 58.3 58.2 0.0 0.0 0.521758 66313 66792 659-665 1.000000 82.4 trnP-UGG-psaJ_p1 trnP-UGG-psaJ 1 ACCCGTGACATTTTGTACCC AAGCCCCGAACCATAGAGTA 20 20 50.0 50.0 58.1 57.8 0.0 0.0 0.269767 72950 73858 1028-1330 1.000000 87.7 trnP-UGG-psaJ_p2 trnP-UGG-psaJ 2 CCCGTGACATTTTGTACCCA AAGCCCCGAACCATAGAGTA 20 20 50.0 50.0 58.1 57.8 0.0 0.0 0.271110 72950 73858 1027-1329 1.000000 87.7 trnP-UGG-psaJ_p3 trnP-UGG-psaJ 3 ACAGGATTTGAACCCGTGAC AAGCCCCGAACCATAGAGTA 20 20 50.0 50.0 58.1 57.8 0.0 0.0 0.277803 72950 73858 1039-1341 1.000000 87.6 trnP-UGG-psaJ_p4 trnP-UGG-psaJ 4 CAGGATTTGAACCCGTGACA AAGCCCCGAACCATAGAGTA 20 20 50.0 50.0 58.1 57.8 0.0 0.0 0.279136 72950 73858 1038-1340 1.000000 87.6 trnP-UGG-psaJ_p5 trnP-UGG-psaJ 5 TGACAGGATTTGAACCCGTG AAGCCCCGAACCATAGAGTA 20 20 50.0 50.0 58.1 57.8 0.0 0.0 0.279136 72950 73858 1041-1343 1.000000 87.5 rps11-rpl36_p1 rps11-rpl36 1 TCGTTGCATACCTTGATCCG GAATGCGTGAGGGGGTTTAA 20 20 50.0 50.0 58.1 58.2 0.0 0.0 0.236432 86616 87486 1593-1733 1.000000 88.9 rps11-rpl36_p2 rps11-rpl36 2 ACTTCCACTGTAGTGTCCGA GAATGCGTGAGGGGGTTTAA 20 20 50.0 50.0 58.0 58.2 10.8 0.0 0.179900 86616 87486 1866-2005 1.000000 88.2 rps11-rpl36_p3 rps11-rpl36 3 TTCCACTGTAGTGTCCGAGT GAATGCGTGAGGGGGTTTAA 20 20 50.0 50.0 58.0 58.2 10.8 0.0 0.179900 86616 87486 1864-2003 1.000000 88.2 rps11-rpl36_p4 rps11-rpl36 4 GAAATCACCCGACCCAGTAC GAATGCGTGAGGGGGTTTAA 20 20 55.0 50.0 58.0 58.2 0.0 0.0 0.190968 86616 87486 1478-1478 0.500000 58.5 rps11-rpl36_p5 rps11-rpl36 5 AGAAATCACCCGACCCAGTA GAATGCGTGAGGGGGTTTAA 20 20 50.0 50.0 58.1 58.2 0.0 0.0 0.224036 86616 87486 1479-1479 0.500000 58.2 rps8-rpl14_p1 rps8-rpl14 1 TTATGTCAGCGATGGTGTCC TTTCATTAGCACCCGAGGTA 20 20 50.0 45.0 57.7 56.2 0.0 0.0 2.059785 88441 89177 777-791 1.000000 75.5 rps8-rpl14_p2 rps8-rpl14 2 GTCAGCGATGGTGTCCTTAC TTTCATTAGCACCCGAGGTA 20 20 55.0 45.0 58.4 56.2 0.0 0.0 2.108681 88441 89177 773-787 1.000000 75.1 rps8-rpl14_p3 rps8-rpl14 3 TATGTCAGCGATGGTGTCCT TTTCATTAGCACCCGAGGTA 20 20 50.0 45.0 58.5 56.2 0.0 0.0 2.265134 88441 89177 776-790 1.000000 73.9 rps8-rpl14_p4 rps8-rpl14 4 TTATGTCAGCGATGGTGTCC TCATTAGCACCCGAGGTATT 20 20 50.0 45.0 57.7 56.0 0.0 0.0 2.294454 88441 89177 775-789 1.000000 73.6 rps8-rpl14_p5 rps8-rpl14 5 TTATGTCAGCGATGGTGTCC TTCATTAGCACCCGAGGTAT 20 20 50.0 45.0 57.7 56.0 0.0 0.0 2.294454 88441 89177 776-790 1.000000 73.6 ycf1_p1 ycf1 1 GCTCGGGTTATGGAAGAAGG CACGATAGGGTCCGTTCAAG 20 20 55.0 55.0 58.0 58.1 0.0 0.0 0.122503 118709 118828 1234-1234 0.500000 59.0 ycf1_p2 ycf1 2 ATGGAAGAAGGGACCGAGAA CACGATAGGGTCCGTTCAAG 20 20 50.0 55.0 58.0 58.1 0.0 0.0 0.124808 118709 118828 1225-1225 0.500000 59.0 ycf1_p3 ycf1 3 GCTCGGGTTATGGAAGAAGG ACGATAGGGTCCGTTCAAGA 20 20 55.0 50.0 58.0 58.2 0.0 0.0 0.201705 118709 118828 1233-1233 0.500000 58.4 ycf1_p4 ycf1 4 ATGGAAGAAGGGACCGAGAA ACGATAGGGTCCGTTCAAGA 20 20 50.0 50.0 58.0 58.2 0.0 0.0 0.204010 118709 118828 1224-1224 0.500000 58.4 ycf1_p5 ycf1 5 TCTCTTCCTTCTCCGAGCTC CACGATAGGGTCCGTTCAAG 20 20 55.0 55.0 58.2 58.1 2.7 0.0 0.319747 118709 118828 1250-1250 0.500000 57.4 ndhH_p1 ndhH 1 CCGGGATCCGTTGAATTTCA TGTCTTAACGAATCGCACGT 20 20 50.0 45.0 58.3 57.9 5.5 1.2 0.309455 124182 125363 2077-2077 0.500000 57.5 ndhH_p2 ndhH 2 GGGGGAGGGGCTTTAATTTT TGTCTTAACGAATCGCACGT 20 20 50.0 45.0 57.7 57.9 0.0 1.2 0.318582 124182 125363 2151-2151 0.500000 57.5 ndhH_p3 ndhH 3 CCGGGATCCGTTGAATTTCA TCAGGTCCAATACGCTGTTG 20 20 50.0 50.0 58.3 57.9 5.5 0.0 0.348074 124182 125363 1700-1700 0.500000 57.2 ndhH_p4 ndhH 4 GGGGGAGGGGCTTTAATTTT TCAGGTCCAATACGCTGTTG 20 20 50.0 50.0 57.7 57.9 0.0 0.0 0.357201 124182 125363 1774-1774 0.500000 57.1 ndhH_p5 ndhH 5 TTCTGGGAAAACGTCAACGA TGTCTTAACGAATCGCACGT 20 20 45.0 45.0 57.7 57.9 9.9 1.2 0.367410 124182 125363 1965-1965 0.500000 57.1 ndhA_p1 ndhA 1 AAGAGTTGAAGCCCCCAAAG CTCGGACTGTTTGTTGACCA 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.052972 125365 127750 2717-2717 0.500000 59.6 ndhA_p2 ndhA 2 CAGGCTCTGGAAGGAATTCC CTCGGACTGTTTGTTGACCA 20 20 55.0 50.0 58.0 58.1 17.3 0.0 0.101784 125365 127750 2872-2872 0.500000 59.2 ndhA_p3 ndhA 3 GGCGGACCGTATGAGAATTT CTCGGACTGTTTGTTGACCA 20 20 50.0 50.0 58.1 58.1 16.7 0.0 0.102430 125365 127750 2851-2851 0.500000 59.2 ndhA_p4 ndhA 4 AAGCCCCCAAAGGAGAATTG CTCGGACTGTTTGTTGACCA 20 20 50.0 50.0 58.1 58.1 0.0 0.0 0.109119 125365 127750 2709-2709 0.500000 59.1 ndhA_p5 ndhA 5 TTCGTCCACCGGGTTTTATC CTCGGACTGTTTGTTGACCA 20 20 50.0 50.0 57.9 58.1 6.3 0.0 0.149575 125365 127750 2640-2640 0.500000 58.8 ndhG_p1 ndhG 1 TGGTCAACAAACAGTCCGAG GAAACAATAGCCGGTCCGAT 20 20 50.0 50.0 58.1 58.1 0.0 14.4 0.102430 128535 129065 1690-1690 0.500000 59.2 ndhG_p2 ndhG 2 AGGCCGTTTACCAATGTCAG GAAACAATAGCCGGTCCGAT 20 20 50.0 50.0 58.2 58.1 0.0 14.4 0.229318 128535 129065 1297-1297 0.500000 58.2 ndhG_p3 ndhG 3 TGATTACCCTATCCCACGCA GAAACAATAGCCGGTCCGAT 20 20 50.0 50.0 58.2 58.1 0.0 14.4 0.254518 128535 129065 1643-1643 0.500000 58.0 ndhG_p4 ndhG 4 TGCTTTAGGCCGTTTACCAA GAAACAATAGCCGGTCCGAT 20 20 45.0 50.0 57.7 58.1 0.0 14.4 0.324073 128535 129065 1303-1303 0.500000 57.4 ndhG_p5 ndhG 5 TTGCTTTAGGCCGTTTACCA GAAACAATAGCCGGTCCGAT 20 20 45.0 50.0 57.7 58.1 0.0 14.4 0.324073 128535 129065 1304-1304 0.500000 57.4 ndhD_p1 ndhD 1 AAATTGCTTCTGCCCCAAGA GCTAATGAGGCATGGGGATC 20 20 45.0 55.0 58.0 58.2 0.0 0.0 0.182430 130276 131775 2293-2293 0.500000 58.5 ndhD_p2 ndhD 2 AATTGCTTCTGCCCCAAGAA GCTAATGAGGCATGGGGATC 20 20 45.0 55.0 58.0 58.2 0.0 0.0 0.182430 130276 131775 2292-2292 0.500000 58.5 ndhD_p3 ndhD 3 AAACAACTCGAAGCATGGGT GCTAATGAGGCATGGGGATC 20 20 45.0 55.0 58.0 58.2 0.0 0.0 0.187163 130276 131775 2191-2191 0.500000 58.5 ndhD_p4 ndhD 4 GGCATGAAACAACTCGAAGC GCTAATGAGGCATGGGGATC 20 20 50.0 55.0 58.0 58.2 0.0 0.0 0.199316 130276 131775 2197-2197 0.500000 58.4 ndhD_p5 ndhD 5 AATTGCTTCTGCCCCAAGAA GGGAGCAGTATGGGCTAATG 20 20 45.0 55.0 58.0 57.8 0.0 0.0 0.205137 130276 131775 2305-2305 0.500000 58.4 trnL-UAG-rpl32_p1 trnL-UAG-rpl32 1 ATGGGATTGTAGAGCGGGTA GCAATCTCTTTCTACGGGCA 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.121286 133207 134157 1578-1578 0.500000 59.0 trnL-UAG-rpl32_p2 trnL-UAG-rpl32 2 ATCATGCCTTTTTCGGACGA GCAATCTCTTTCTACGGGCA 20 20 45.0 50.0 57.9 58.0 0.0 0.0 0.132126 133207 134157 1313-1313 0.500000 58.9 trnL-UAG-rpl32_p3 trnL-UAG-rpl32 3 TCATGCCTTTTTCGGACGAA GCAATCTCTTTCTACGGGCA 20 20 45.0 50.0 58.1 58.0 2.6 0.0 0.138616 133207 134157 1312-1312 0.500000 58.9 trnL-UAG-rpl32_p4 trnL-UAG-rpl32 4 TGCCTTTTTCGGACGAATCA GCAATCTCTTTCTACGGGCA 20 20 45.0 50.0 58.1 58.0 8.1 0.0 0.138616 133207 134157 1309-1309 0.500000 58.9 trnL-UAG-rpl32_p5 trnL-UAG-rpl32 5 TCCTAAGAGCAGCGTGTCTA GCAATCTCTTTCTACGGGCA 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.148453 133207 134157 1048-1048 0.500000 58.8 ndhF_p1 ndhF 1 GCCCGTTTTGAATACTTTGCA CTTGAACGGACCCTATCGTG 21 20 42.9 55.0 58.0 58.1 0.0 0.0 1.097362 135408 137651 2635-2635 0.500000 51.2 ndhF_p2 ndhF 2 GCCCGTTTTGAATACTTTGCA TCTTGAACGGACCCTATCGT 21 20 42.9 50.0 58.0 58.2 0.0 0.0 1.176564 135408 137651 2636-2636 0.500000 50.6 ndhF_p3 ndhF 3 AGCCCGTTTTGAATACTTTGC CTTGAACGGACCCTATCGTG 21 20 42.9 55.0 57.7 58.1 0.0 0.0 1.375260 135408 137651 2636-2636 0.500000 49.0 ndhF_p4 ndhF 4 AGCCCGTTTTGAATACTTTGC TCTTGAACGGACCCTATCGT 21 20 42.9 50.0 57.7 58.2 0.0 0.0 1.454462 135408 137651 2637-2637 0.500000 48.4 ndhF_p5 ndhF 5 GCCCGTTTTGAATACTTTGCA ATCCTTTCTTGAACGGACCC 21 20 42.9 50.0 58.0 57.5 0.0 10.2 1.511608 135408 137651 2642-2642 0.500000 47.9