Hotspot

trnT-UGU-trnL-UAA

LSC · 47452-48344 · 893 bp

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Pi 0.0126
MarkerSeek score 63.50
Primer available yes
Label trnT-UGU-trnL-UAA

Feature Metadata

Pi Curve

Haplotype Network

Species Separation

Primer Ranking

Primer ID fwd_seq rev_seq fwd_gc rev_gc fwd_tm rev_tm amplicon_size cross_species_success_rate primer_score
trnT-UGU-trnL-UAA_p1 GCGATGCTCTAACCTCTGAG ACCAATTTCGCCATATCCCC 55.0 50.0 57.9 58.0 921-943 bp 1.0 84.4
trnT-UGU-trnL-UAA_p2 GCGATGCTCTAACCTCTGAG AGCCAATTAAGTCCGTAGCG 55.0 50.0 57.9 58.1 944-966 bp 1.0 83.8
trnT-UGU-trnL-UAA_p3 GCGATGCTCTAACCTCTGAG TAGCGTCTACCAATTTCGCC 55.0 50.0 57.9 58.1 929-951 bp 1.0 83.8
trnT-UGU-trnL-UAA_p4 GGAATCGAACCGATGACCAT ACCAATTTCGCCATATCCCC 50.0 50.0 57.8 58.0 953-975 bp 1.0 83.3
trnT-UGU-trnL-UAA_p5 GGAATCGAACCGATGACCAT AGCCAATTAAGTCCGTAGCG 50.0 50.0 57.8 58.1 976-998 bp 1.0 82.7