Hotspot

trnT-UGU-trnL-UAA

LSC · 49424-50542 · 1119 bp

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Pi 0.0564
MarkerSeek score 91.30
Primer available yes
Label trnT-UGU-trnL-UAA

Feature Metadata

Pi Curve

Haplotype Network

Species Separation

Primer Ranking

Primer ID fwd_seq rev_seq fwd_gc rev_gc fwd_tm rev_tm amplicon_size cross_species_success_rate primer_score
trnT-UGU-trnL-UAA_p1 CGATGACCCTCGCATTACAA ACCAATTTCGCCATATCCCC 50.0 50.0 58.1 58.0 1150-1191 bp 1.0 91.4
trnT-UGU-trnL-UAA_p2 CGATGACCCTCGCATTACAA TAGCGTCTACCAATTTCGCC 50.0 50.0 58.1 58.1 1158-1199 bp 1.0 90.9
trnT-UGU-trnL-UAA_p3 GCGATGCTCTAACCTCTGAG ACCAATTTCGCCATATCCCC 55.0 50.0 57.9 58.0 1128-1169 bp 1.0 90.9
trnT-UGU-trnL-UAA_p4 GCGATGCTCTAACCTCTGAG TAGCGTCTACCAATTTCGCC 55.0 50.0 57.9 58.1 1136-1177 bp 1.0 90.4
trnT-UGU-trnL-UAA_p5 CGATGACCCTCGCATTACAA AGTCCGTAGCGTCTACCAAT 50.0 50.0 58.1 58.2 1164-1205 bp 1.0 89.6