primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnH-GUG-psbA_p1 trnH-GUG-psbA 1 CTGCCTTAATCCACTTGGCT TGGGCTGATATCATCAACCG 20 20 50.0 50.0 57.9 57.5 0.0 5.7 0.683853 158 738 707-724 1.000000 78.2 trnH-GUG-psbA_p2 trnH-GUG-psbA 2 CTGCCTTAATCCACTTGGCT GGGCTGATATCATCAACCGT 20 20 50.0 50.0 57.9 57.4 0.0 5.7 0.685619 158 738 706-723 1.000000 78.2 trnH-GUG-psbA_p3 trnH-GUG-psbA 3 ACTGCCTTAATCCACTTGGC TGGGCTGATATCATCAACCG 20 20 50.0 50.0 58.2 57.5 0.0 5.7 0.709640 158 738 708-725 1.000000 78.0 trnH-GUG-psbA_p4 trnH-GUG-psbA 4 ACTGCCTTAATCCACTTGGC GGGCTGATATCATCAACCGT 20 20 50.0 50.0 58.2 57.4 0.0 5.7 0.711407 158 738 707-724 1.000000 78.0 trnH-GUG-psbA_p5 trnH-GUG-psbA 5 AATCCACTTGGCTACATCCG TGGGCTGATATCATCAACCG 20 20 50.0 50.0 57.7 57.5 0.0 5.7 0.881127 158 738 700-717 1.000000 76.7 trnK-UUU-rps16_p1 trnK-UUU-rps16 1 TCTACCAACGGTATGGACGA TCCTTGAAAAAGGTGCCCAA 20 20 50.0 45.0 57.9 57.8 10.6 4.5 0.294178 4862 5806 1112-1157 1.000000 81.8 trnK-UUU-rps16_p2 trnK-UUU-rps16 2 TCTACCAACGGTATGGACGA TTCCTTGAAAAAGGTGCCCA 20 20 50.0 45.0 57.9 57.8 10.6 4.5 0.294178 4862 5806 1113-1158 1.000000 81.8 trnK-UUU-rps16_p3 trnK-UUU-rps16 3 AAAGCCGAGTACTCTACCGT TCCTTGAAAAAGGTGCCCAA 20 20 50.0 45.0 58.2 57.8 20.3 4.5 0.335327 4862 5806 1047-1092 1.000000 81.7 trnK-UUU-rps16_p4 trnK-UUU-rps16 4 AAGCCGAGTACTCTACCGTT TCCTTGAAAAAGGTGCCCAA 20 20 50.0 45.0 58.2 57.8 20.3 4.5 0.335327 4862 5806 1046-1091 1.000000 81.7 trnK-UUU-rps16_p5 trnK-UUU-rps16 5 AAGCCGAGTACTCTACCGTT TTCCTTGAAAAAGGTGCCCA 20 20 50.0 45.0 58.2 57.8 20.3 4.5 0.335327 4862 5806 1047-1092 1.000000 81.7 psbI-trnS-GCU_p1 psbI-trnS-GCU 1 AATCCTGGGCGTGAGGAATA TGGACTAAAGCGTCGGATTG 20 20 50.0 50.0 58.5 58.0 3.0 0.0 0.497443 9067 9211 239-239 1.000000 77.7 psbI-trnS-GCU_p2 psbI-trnS-GCU 2 ATCCTGGGCGTGAGGAATAA TGGACTAAAGCGTCGGATTG 20 20 50.0 50.0 58.5 58.0 3.0 0.0 0.497443 9067 9211 238-238 1.000000 77.7 psbI-trnS-GCU_p3 psbI-trnS-GCU 3 TAATCCTGGGCGTGAGGAAT TGGACTAAAGCGTCGGATTG 20 20 50.0 50.0 58.5 58.0 3.0 0.0 0.497443 9067 9211 240-240 1.000000 77.7 psbI-trnS-GCU_p4 psbI-trnS-GCU 4 AATCCTGGGCGTGAGGAATA GTGGACTAAAGCGTCGGATT 20 20 50.0 50.0 58.5 58.0 3.0 0.0 0.498831 9067 9211 240-240 1.000000 77.7 psbI-trnS-GCU_p5 psbI-trnS-GCU 5 ATCCTGGGCGTGAGGAATAA GTGGACTAAAGCGTCGGATT 20 20 50.0 50.0 58.5 58.0 3.0 0.0 0.498831 9067 9211 239-239 1.000000 77.7 trnS-GCU-trnG-UCC_p1 trnS-GCU-trnG-UCC 1 CAATCCGACGCTTTAGTCCA AATCAAACCGAAAGACCCCT 20 20 50.0 45.0 58.0 57.0 0.0 0.0 0.976483 9300 10322 1103-1135 1.000000 76.9 trnS-GCU-trnG-UCC_p2 trnS-GCU-trnG-UCC 2 CAATCCGACGCTTTAGTCCA ATCAAACCGAAAGACCCCTT 20 20 50.0 45.0 58.0 57.0 0.0 0.0 0.976483 9300 10322 1102-1134 1.000000 76.9 trnS-GCU-trnG-UCC_p3 trnS-GCU-trnG-UCC 3 AATCCGACGCTTTAGTCCAC AATCAAACCGAAAGACCCCT 20 20 50.0 45.0 58.0 57.0 0.0 0.0 0.977871 9300 10322 1102-1134 1.000000 76.9 trnS-GCU-trnG-UCC_p4 trnS-GCU-trnG-UCC 4 AATCCGACGCTTTAGTCCAC ATCAAACCGAAAGACCCCTT 20 20 50.0 45.0 58.0 57.0 0.0 0.0 0.977871 9300 10322 1101-1133 1.000000 76.9 trnS-GCU-trnG-UCC_p5 trnS-GCU-trnG-UCC 5 ACGGAAAGAGAGGGATTCGA ATCAAACCGAAAGACCCCTT 20 20 50.0 45.0 58.2 57.0 0.0 0.0 1.123249 9300 10322 1156-1188 1.000000 75.5 atpF-atpH_p1 atpF-atpH 1 CAGTGACCCAAGGAAACGAA TGGATTGGTCGTGGCATTAG 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.075164 14370 14619 338-340 1.000000 82.9 atpF-atpH_p2 atpF-atpH 2 ATTAAACCCGAAACTCCCGG TGGATTGGTCGTGGCATTAG 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.155271 14370 14619 366-368 1.000000 82.0 atpF-atpH_p3 atpF-atpH 3 CAGTGACCCAAGGAAACGAA TTTATGGATTGGTCGTGGCA 20 20 50.0 45.0 58.0 57.5 0.0 0.0 0.536851 14370 14619 342-344 1.000000 79.2 atpF-atpH_p4 atpF-atpH 4 CAGTGACCCAAGGAAACGAA CCAGAGGCAGAGGGAAAAAT 20 20 50.0 50.0 58.0 57.5 0.0 0.0 0.559753 14370 14619 409-411 1.000000 78.4 atpF-atpH_p5 atpF-atpH 5 ATTAAACCCGAAACTCCCGG TTTATGGATTGGTCGTGGCA 20 20 50.0 45.0 57.9 57.5 0.0 0.0 0.616957 14370 14619 370-372 1.000000 78.3 rpoB-trnC-GCA_p1 rpoB-trnC-GCA 1 GAACCCACGAAATCCCTCAA TGTTGTTGTTGATCAGGCGA 20 20 50.0 45.0 57.8 58.0 0.0 0.0 0.233785 28228 29531 1467-1490 1.000000 81.8 rpoB-trnC-GCA_p2 rpoB-trnC-GCA 2 GAACCCACGAAATCCCTCAA TTGTTGTTGATCAGGCGACA 20 20 50.0 45.0 57.8 58.0 0.0 14.7 0.233785 28228 29531 1465-1488 1.000000 81.8 rpoB-trnC-GCA_p3 rpoB-trnC-GCA 3 GAACCCACGAAATCCCTCAA CCGGATTTGAACTGGGGAAA 20 20 50.0 50.0 57.8 58.1 0.0 0.0 0.276329 28228 29531 1444-1467 1.000000 81.5 rpoB-trnC-GCA_p4 rpoB-trnC-GCA 4 TCAAGCCCCGATCAATGAAC TGTTGTTGTTGATCAGGCGA 20 20 50.0 45.0 58.2 58.0 0.0 0.0 0.289390 28228 29531 1483-1506 1.000000 81.3 rpoB-trnC-GCA_p5 rpoB-trnC-GCA 5 TCAAGCCCCGATCAATGAAC TTGTTGTTGATCAGGCGACA 20 20 50.0 45.0 58.2 58.0 0.0 14.7 0.289390 28228 29531 1481-1504 1.000000 81.3 trnT-UGU-trnL-UAA_p1 trnT-UGU-trnL-UAA 1 GCGATGCTCTAACCTCTGAG ACCAATTTCGCCATATCCCC 20 20 55.0 50.0 57.9 58.0 0.0 0.0 0.137364 50377 51419 1057-1093 1.000000 82.5 trnT-UGU-trnL-UAA_p2 trnT-UGU-trnL-UAA 2 GCGATGCTCTAACCTCTGAG TAGCGTCTACCAATTTCGCC 20 20 55.0 50.0 57.9 58.1 0.0 0.0 0.202173 50377 51419 1065-1101 1.000000 81.9 trnT-UGU-trnL-UAA_p3 trnT-UGU-trnL-UAA 3 GGAATCGAACCGATGACCAT ACCAATTTCGCCATATCCCC 20 20 50.0 50.0 57.8 58.0 15.5 0.0 0.245117 50377 51419 1089-1125 1.000000 81.5 trnT-UGU-trnL-UAA_p4 trnT-UGU-trnL-UAA 4 GGAATCGAACCGATGACCAT TAGCGTCTACCAATTTCGCC 20 20 50.0 50.0 57.8 58.1 15.5 0.0 0.309926 50377 51419 1097-1133 1.000000 81.0 trnT-UGU-trnL-UAA_p5 trnT-UGU-trnL-UAA 5 GCGATGCTCTAACCTCTGAG ATCCAATCAAGTCCGTAGCG 20 20 55.0 50.0 57.9 57.8 0.0 0.0 0.357808 50377 51419 1080-1116 1.000000 80.6 accD-psaI_p1 accD-psaI 1 AGTTATTTCAGCTGCATGGGT CCATTGCAATTGCCGGAAAT 21 20 42.9 45.0 57.9 58.0 9.5 26.9 1.118636 63059 63804 860-885 1.000000 73.1 accD-psaI_p2 accD-psaI 2 AGTTATTTCAGCTGCATGGGT AAGAAGCCATTGCAATTGCC 21 20 42.9 45.0 57.9 57.9 9.5 26.8 1.195170 63059 63804 866-891 1.000000 72.4 accD-psaI_p3 accD-psaI 3 TTTCAGCTGCATGGGTTTTT CCATTGCAATTGCCGGAAAT 20 20 40.0 45.0 56.7 58.0 9.5 26.9 1.324723 63059 63804 855-880 1.000000 71.4 accD-psaI_p4 accD-psaI 4 TTTCAGCTGCATGGGTTTTT AAGAAGCCATTGCAATTGCC 20 20 40.0 45.0 56.7 57.9 9.5 26.8 1.401257 63059 63804 861-886 1.000000 70.8 accD-psaI_p5 accD-psaI 5 AGTTATTTCAGCTGCATGGGT AGGCACCAAAATAGAGGGGA 21 20 42.9 50.0 57.9 58.3 9.5 0.0 1.410404 63059 63804 826-851 1.000000 70.8 ycf4-cemA_p1 ycf4-cemA 1 TGCGCGTACCAATTGAAGTA GAGATCCACCAGGGCAAAAA 20 20 45.0 50.0 57.9 58.1 8.4 0.0 0.158370 64898 65619 818-828 1.000000 81.7 ycf4-cemA_p2 ycf4-cemA 2 CTTGCGCGTACCAATTGAAG GAGATCCACCAGGGCAAAAA 20 20 50.0 50.0 58.1 58.1 8.4 0.0 0.194446 64898 65619 820-830 1.000000 81.5 ycf4-cemA_p3 ycf4-cemA 3 AAAAAGCTGCTGAATTGGCC GAGATCCACCAGGGCAAAAA 20 20 45.0 50.0 57.8 58.1 1.4 0.0 0.251008 64898 65619 845-855 1.000000 80.9 ycf4-cemA_p4 ycf4-cemA 4 AAAGCTGCTGAATTGGCCTA GAGATCCACCAGGGCAAAAA 20 20 45.0 50.0 57.8 58.1 1.4 0.0 0.297297 64898 65619 843-853 1.000000 80.5 ycf4-cemA_p5 ycf4-cemA 5 TGCGCGTACCAATTGAAGTA GAGAGAGAGATCCACCAGGG 20 20 45.0 60.0 57.9 58.3 8.4 0.0 0.378315 64898 65619 824-834 1.000000 80.0 rrn23_p1 rrn23 1 TCCTTCCATTTAGCAGCACC AAACTTCTGTCGCTCCATCC 20 20 50.0 50.0 57.9 57.9 0.0 0.0 0.229375 108747 111550 2943-2943 1.000000 79.2 rrn23_p2 rrn23 2 CCTTCCATTTAGCAGCACCT AAACTTCTGTCGCTCCATCC 20 20 50.0 50.0 57.9 57.9 0.0 0.0 0.235394 108747 111550 2942-2942 1.000000 79.1 rrn23_p3 rrn23 3 CGATTCGGCAGTTCGATCTA AAACTTCTGTCGCTCCATCC 20 20 50.0 50.0 57.6 57.9 0.0 0.0 0.501622 108747 111550 2992-2992 1.000000 77.0 rrn23_p4 rrn23 4 AGCCTTAAAGTTAACGGCGA AAACTTCTGTCGCTCCATCC 20 20 45.0 50.0 57.5 57.9 16.6 0.0 0.561362 108747 111550 2911-2911 1.000000 76.5 rrn23_p5 rrn23 5 GCACCTTAGGATGGCATAGC AAACTTCTGTCGCTCCATCC 20 20 55.0 50.0 58.5 57.9 4.8 0.0 0.572475 108747 111550 2928-2928 1.000000 76.4 trnN-GUU-ycf1_p1 trnN-GUU-ycf1 1 TCAAAGCGAGCCCTTTCATT TGATCAAGAAGGAGGGTGGT 20 20 45.0 50.0 58.1 58.0 0.0 0.0 0.135093 113134 113462 1093-1140 1.000000 83.1 trnN-GUU-ycf1_p2 trnN-GUU-ycf1 2 ATGGAACTTGGTTGTGGGTC TGATCAAGAAGGAGGGTGGT 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.049416 113134 113462 1598-1644 1.000000 82.6 trnN-GUU-ycf1_p3 trnN-GUU-ycf1 3 GGAACTTGGTTGTGGGTCTT TGATCAAGAAGGAGGGTGGT 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.112158 113134 113462 1596-1642 1.000000 82.1 trnN-GUU-ycf1_p4 trnN-GUU-ycf1 4 ATGGAACTTGGTTGTGGGTC AGAAACCTCCCTGTATCCCC 20 20 50.0 55.0 58.0 58.1 0.0 0.0 0.109924 113134 113462 1700-1746 1.000000 81.9 trnN-GUU-ycf1_p5 trnN-GUU-ycf1 5 TGTTTTACTCCCCGCAACTC TGATCAAGAAGGAGGGTGGT 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.157906 113134 113462 1470-1517 1.000000 81.9 ycf1-ndhF_p1 ycf1-ndhF 1 TCGTAGTAGCTCCGTTCCAT TGATCAAGAAGGAGGGTGGT 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.093237 113485 113578 877-924 1.000000 84.5 ycf1-ndhF_p2 ycf1-ndhF 2 GAGCTACTGAGGAACAACGG TGATCAAGAAGGAGGGTGGT 20 20 55.0 50.0 58.0 58.0 0.0 0.0 0.047124 113485 113578 984-1031 1.000000 84.3 ycf1-ndhF_p3 ycf1-ndhF 3 GCTTCCTTCGTAACTCTCGG TGATCAAGAAGGAGGGTGGT 20 20 55.0 50.0 58.1 58.0 0.0 0.0 0.134105 113485 113578 904-951 1.000000 84.0 ycf1-ndhF_p4 ycf1-ndhF 4 GAGCTACTGAGGAACAACGG AGAAACCTCCCTGTATCCCC 20 20 55.0 55.0 58.0 58.1 0.0 0.0 0.107632 113485 113578 1086-1133 1.000000 83.4 ycf1-ndhF_p5 ycf1-ndhF 5 TCAAAGCGAGCCCTTTCATT TGATCAAGAAGGAGGGTGGT 20 20 45.0 50.0 58.1 58.0 0.0 0.0 0.135093 113485 113578 1093-1140 1.000000 83.1 rpl32-trnL-UAG_p1 rpl32-trnL-UAG 1 CAAAGCGTTTTGGGCAGTAC TCCTAAGAGCAGCGTGTCTA 20 20 50.0 50.0 58.2 57.9 16.1 0.0 0.358208 117383 118257 1023-1049 1.000000 79.9 rpl32-trnL-UAG_p2 rpl32-trnL-UAG 2 CAAAGCGTTTTGGGCAGTAC AGCAGCGTGTCTACCAATTT 20 20 50.0 45.0 58.2 57.8 16.1 0.0 0.418935 117383 118257 1016-1042 1.000000 79.4 rpl32-trnL-UAG_p3 rpl32-trnL-UAG 3 CAAAGCGTTTTGGGCAGTAC CCTAAGAGCAGCGTGTCTAC 20 20 50.0 55.0 58.2 57.8 16.1 0.0 0.430226 117383 118257 1022-1048 1.000000 79.3 rpl32-trnL-UAG_p4 rpl32-trnL-UAG 4 CAAAGCGTTTTGGGCAGTAC CTAAGAGCAGCGTGTCTACC 20 20 50.0 55.0 58.2 57.8 16.1 0.0 0.430226 117383 118257 1021-1047 1.000000 79.3 rpl32-trnL-UAG_p5 rpl32-trnL-UAG 5 AAAGCGTTTTGGGCAGTACT TCCTAAGAGCAGCGTGTCTA 20 20 45.0 50.0 58.3 57.9 0.0 0.0 0.436714 117383 118257 1022-1048 1.000000 79.3 ccsA-ndhD_p1 ccsA-ndhD 1 TGCAATTTTGGCTTCTATGGG TCCGGATTTTGTTTTCTCCCT 21 21 42.9 42.9 57.1 57.5 0.0 0.0 3.410414 119396 119717 498-519 1.000000 54.1 ccsA-ndhD_p2 ccsA-ndhD 2 GCAATTTTGGCTTCTATGGGA TCCGGATTTTGTTTTCTCCCT 21 21 42.9 42.9 56.8 57.5 0.0 0.0 3.688917 119396 119717 497-518 1.000000 51.9 ccsA-ndhD_p3 ccsA-ndhD 3 CTGCAATTTTGGCTTCTATGGG TCCGGATTTTGTTTTCTCCCT 22 21 45.5 42.9 58.2 57.5 0.0 0.0 3.730055 119396 119717 499-520 1.000000 51.6 ccsA-ndhD_p4 ccsA-ndhD 4 TGCAATTTTGGCTTCTATGGG ATCCGGATTTTGTTTTCTCCCT 21 22 42.9 40.9 57.1 58.0 0.0 12.4 3.939049 119396 119717 499-520 1.000000 49.9 ccsA-ndhD_p5 ccsA-ndhD 5 TGCAATTTTGGCTTCTATGGG TCCGGATTTTGTTTTCTCCC 21 20 42.9 45.0 57.1 55.9 0.0 0.0 3.961854 119396 119717 498-519 1.000000 49.7 ndhA_p1 ndhA 1 ACCCAATTACCATAGGAACCA TGGGAGAAGTTGATCGGTGA 21 20 42.9 50.0 56.3 58.4 0.0 0.0 3.063579 124251 126548 2415-2424 1.000000 57.9 ndhA_p2 ndhA 2 AACCCAATTACCATAGGAACCA TGGGAGAAGTTGATCGGTGA 22 20 40.9 50.0 57.0 58.4 0.0 0.0 3.317884 124251 126548 2416-2425 1.000000 55.8 ndhA_p3 ndhA 3 ACCCAATTACCATAGGAACCA ATGGGAGAAGTTGATCGGTG 21 20 42.9 50.0 56.3 57.3 0.0 0.0 3.402156 124251 126548 2416-2425 1.000000 55.2 ndhA_p4 ndhA 4 ACCCAATTACCATAGGAACCA GGGAGAAGTTGATCGGTGAA 21 20 42.9 50.0 56.3 57.2 0.0 0.0 3.465837 124251 126548 2414-2423 1.000000 54.7 ndhA_p5 ndhA 5 GAACCCAATTACCATAGGAACCA TGGGAGAAGTTGATCGGTGA 23 20 43.5 50.0 58.1 58.4 0.0 0.0 3.497906 124251 126548 2417-2426 1.000000 54.4 ycf1-trnN-GUU_p1 ycf1-trnN-GUU 1 GTAGAACCCAACCACAACGA AGGATTCGAACCTACGACCA 20 20 50.0 50.0 57.8 58.2 0.0 15.0 0.400234 134143 134471 469-509 1.000000 78.4 ycf1-trnN-GUU_p2 ycf1-trnN-GUU 2 TAGAACCCAACCACAACGAC AGGATTCGAACCTACGACCA 20 20 50.0 50.0 57.8 58.2 0.0 15.0 0.400234 134143 134471 468-508 1.000000 78.4 ycf1-trnN-GUU_p3 ycf1-trnN-GUU 3 AGTAGAACCCAACCACAACG AGGATTCGAACCTACGACCA 20 20 50.0 50.0 57.8 58.2 0.0 15.0 0.406475 134143 134471 470-510 1.000000 78.4 ycf1-trnN-GUU_p4 ycf1-trnN-GUU 4 GTAGAACCCAACCACAACGA AAAGCGAGCCCTTTCATTCT 20 20 50.0 45.0 57.8 57.8 0.0 0.0 0.450178 134143 134471 527-567 1.000000 77.9 ycf1-trnN-GUU_p5 ycf1-trnN-GUU 5 TAGAACCCAACCACAACGAC AAAGCGAGCCCTTTCATTCT 20 20 50.0 45.0 57.8 57.8 0.0 0.0 0.450178 134143 134471 526-566 1.000000 77.9