primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnK-UUU_p1 trnK-UUU 1 TAAAGACGGTTTTCGGTGCT GGTCGTGCAATCCAATCTCT 20 20 45.0 50.0 57.8 58.0 0.0 0.0 0.273440 1831 4396 2971-2986 1.000000 78.9 trnK-UUU_p2 trnK-UUU 2 GGACTCCCAAGCACACAAAT GGTCGTGCAATCCAATCTCT 20 20 50.0 50.0 58.4 58.0 0.0 0.0 0.409016 1831 4396 2856-2871 1.000000 77.8 trnK-UUU_p3 trnK-UUU 3 ATATGCCCGTGTCAACCAAT GGTCGTGCAATCCAATCTCT 20 20 45.0 50.0 57.6 58.0 0.0 0.0 0.465211 1831 4396 2778-2793 1.000000 77.4 trnK-UUU_p4 trnK-UUU 4 ATGCCCGTGTCAACCAATAT GGTCGTGCAATCCAATCTCT 20 20 45.0 50.0 57.6 58.0 0.0 0.0 0.465211 1831 4396 2776-2791 1.000000 77.4 trnK-UUU_p5 trnK-UUU 5 ATGCCCGTGTCAACCAATAT ACAAGAGGCCCCCTATGAAT 20 20 45.0 50.0 57.6 58.1 0.0 0.0 0.522510 1831 4396 2954-2971 1.000000 77.1 rps16-trnQ-UUG_p1 rps16-trnQ-UUG 1 CAGCCGATCATGTCCTTCAA GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 58.0 58.1 0.0 16.9 0.104521 6330 8247 2002-2009 1.000000 80.4 rps16-trnQ-UUG_p2 rps16-trnQ-UUG 2 GCCGATCATGTCCTTCAAGT GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 58.0 58.1 0.0 16.9 0.105939 6330 8247 2000-2007 1.000000 80.4 rps16-trnQ-UUG_p3 rps16-trnQ-UUG 3 AATCCACAGCCGATCATGTC GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 58.0 58.1 0.0 16.9 0.117059 6330 8247 2008-2015 1.000000 80.3 rps16-trnQ-UUG_p4 rps16-trnQ-UUG 4 GAATCCACAGCCGATCATGT GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 58.0 58.1 0.0 16.9 0.117059 6330 8247 2009-2016 1.000000 80.3 rps16-trnQ-UUG_p5 rps16-trnQ-UUG 5 GTCGAGCTAAGAGCACCTTC GAGGTTCGAATCCTTCCGTC 20 20 55.0 55.0 58.1 58.1 0.6 16.9 0.160149 6330 8247 2055-2062 1.000000 80.0 trnS-GCU-trnG-UCC_p1 trnS-GCU-trnG-UCC 1 ATTAGCAATCCGCCGCTTTA AACCGAAAGACCCCTTAACT 20 20 45.0 45.0 58.0 56.4 0.0 0.0 1.674622 9633 10579 1041-1059 1.000000 69.9 trnS-GCU-trnG-UCC_p2 trnS-GCU-trnG-UCC 2 AGGAAACGGAAAGAGAGGGA AACCGAAAGACCCCTTAACT 20 20 50.0 45.0 58.0 56.4 0.0 0.0 1.662051 9633 10579 1095-1113 1.000000 69.8 trnS-GCU-trnG-UCC_p3 trnS-GCU-trnG-UCC 3 ACGGAAAGAGAGGGATTCGA AACCGAAAGACCCCTTAACT 20 20 50.0 45.0 58.2 56.4 0.0 0.0 1.787764 9633 10579 1090-1108 1.000000 68.8 trnS-GCU-trnG-UCC_p4 trnS-GCU-trnG-UCC 4 GAGGAAACGGAAAGAGAGGG AACCGAAAGACCCCTTAACT 20 20 55.0 45.0 57.6 56.4 0.0 0.0 2.024726 9633 10579 1096-1114 1.000000 66.9 trnS-GCU-trnG-UCC_p5 trnS-GCU-trnG-UCC 5 GCTTTAGTCCACTCAGCCAT AACCGAAAGACCCCTTAACT 20 20 50.0 45.0 57.6 56.4 0.9 0.0 2.046364 9633 10579 1027-1045 1.000000 66.9 trnG-UCC-trnR-UCU_p1 trnG-UCC-trnR-UCU 1 AGCCTTCCAAGCTAACGATG AGAAGACCTCTGTCCTATCCA 20 21 50.0 47.6 58.0 56.9 0.0 0.0 2.081443 11338 11477 208-220 1.000000 68.5 trnG-UCC-trnR-UCU_p2 trnG-UCC-trnR-UCU 2 CCTAGCCTTCCAAGCTAACG AGAAGACCTCTGTCCTATCCA 20 21 55.0 47.6 58.1 56.9 0.0 0.0 2.110280 11338 11477 211-223 1.000000 68.2 trnG-UCC-trnR-UCU_p3 trnG-UCC-trnR-UCU 3 AGCCTTCCAAGCTAACGATG AGGTTTAGAAGACCTCTGTCCT 20 22 50.0 45.5 58.0 57.9 0.0 0.0 2.164771 11338 11477 214-226 1.000000 67.8 trnG-UCC-trnR-UCU_p4 trnG-UCC-trnR-UCU 4 CCTAGCCTTCCAAGCTAACG AGGTTTAGAAGACCTCTGTCCT 20 22 55.0 45.5 58.1 57.9 0.0 0.0 2.193608 11338 11477 217-229 1.000000 67.5 trnG-UCC-trnR-UCU_p5 trnG-UCC-trnR-UCU 5 CCCTAGCCTTCCAAGCTAAC AGAAGACCTCTGTCCTATCCA 20 21 55.0 47.6 57.7 56.9 0.0 0.0 2.385293 11338 11477 212-224 1.000000 66.0 petN-psbM_p1 petN-psbM 1 TCTTGCTTGGGCTGCTTTAA TGCTACTGCACTGTTCATTCT 20 21 45.0 42.9 58.0 57.6 0.0 0.0 1.413468 30701 31884 1243-1339 1.000000 73.4 petN-psbM_p2 petN-psbM 2 AGTAAGTCTTGCTTGGGCTG TGCTACTGCACTGTTCATTCT 20 21 50.0 42.9 57.8 57.6 0.0 0.0 1.598551 30701 31884 1249-1345 1.000000 71.9 petN-psbM_p3 petN-psbM 3 ATGGGGAAGAAGTGGACTCT TGCTACTGCACTGTTCATTCT 20 21 50.0 42.9 57.6 57.6 0.0 0.0 1.758286 30701 31884 1189-1285 1.000000 70.6 petN-psbM_p4 petN-psbM 4 TCTTGCTTGGGCTGCTTTAA TGCTACTGCACTGTTCATTC 20 20 45.0 45.0 58.0 56.1 0.0 0.0 1.936016 30701 31884 1243-1339 1.000000 69.2 petN-psbM_p5 petN-psbM 5 AGTAAGTCTTGCTTGGGCTG TGCTACTGCACTGTTCATTC 20 20 50.0 45.0 57.8 56.1 0.0 0.0 2.121100 30701 31884 1249-1345 1.000000 67.7 trnD-GUC-trnY-GUA_p1 trnD-GUC-trnY-GUA 1 TTCATCGGATCCTAGGTCGG ATGGATTCTTCCTGGGTCGA 20 20 55.0 50.0 58.4 58.1 10.8 0.0 0.503103 33237 33631 567-583 1.000000 79.3 trnD-GUC-trnY-GUA_p2 trnD-GUC-trnY-GUA 2 TTCATCGGATCCTAGGTCGG TGGATTCTTCCTGGGTCGAT 20 20 55.0 50.0 58.4 58.1 10.8 0.0 0.503103 33237 33631 566-582 1.000000 79.3 trnD-GUC-trnY-GUA_p3 trnD-GUC-trnY-GUA 3 CGGTGCTCTGACCAATTGAA ATGGATTCTTCCTGGGTCGA 20 20 50.0 50.0 58.5 58.1 7.1 0.0 0.597757 33237 33631 506-522 1.000000 79.0 trnD-GUC-trnY-GUA_p4 trnD-GUC-trnY-GUA 4 CGGTGCTCTGACCAATTGAA TGGATTCTTCCTGGGTCGAT 20 20 50.0 50.0 58.5 58.1 7.1 0.0 0.597757 33237 33631 505-521 1.000000 79.0 trnD-GUC-trnY-GUA_p5 trnD-GUC-trnY-GUA 5 TTCATCGGATCCTAGGTCGG TGGCAATATGTCTACGCTGG 20 20 55.0 50.0 58.4 57.8 10.8 0.0 0.621620 33237 33631 510-526 1.000000 78.7 trnE-UUC-trnT-GGU_p1 trnE-UUC-trnT-GGU 1 GCTGCCTCCTTGAAAGAGAG GAACCGATGACTTACGCCTT 20 20 55.0 50.0 58.3 58.0 0.0 0.0 0.269359 33848 34394 611-650 1.000000 83.4 trnE-UUC-trnT-GGU_p2 trnE-UUC-trnT-GGU 2 TGTCCTGAACCACTAGACGA GAACCGATGACTTACGCCTT 20 20 50.0 50.0 57.7 58.0 0.0 0.0 0.287509 33848 34394 590-629 1.000000 83.3 trnE-UUC-trnT-GGU_p3 trnE-UUC-trnT-GGU 3 GCTGCCTCCTTGAAAGAGAG TACCGCTGAGTTAAAAGGGC 20 20 55.0 50.0 58.3 57.9 0.0 0.0 0.366926 33848 34394 576-615 1.000000 82.7 trnE-UUC-trnT-GGU_p4 trnE-UUC-trnT-GGU 4 TGTCCTGAACCACTAGACGA TACCGCTGAGTTAAAAGGGC 20 20 50.0 50.0 57.7 57.9 0.0 0.0 0.385076 33848 34394 555-594 1.000000 82.6 trnE-UUC-trnT-GGU_p5 trnE-UUC-trnT-GGU 5 GCTGCCTCCTTGAAAGAGAG TGGAAAAAGCCCCTTATCGG 20 20 55.0 50.0 58.3 57.9 0.0 0.0 0.401198 33848 34394 635-674 1.000000 82.3 trnT-GGU-psbD_p1 trnT-GGU-psbD 1 AATTGAATCAAACGGGCCCT ACAAAAACGAAACGGTCCCT 20 20 45.0 45.0 58.1 58.2 22.4 0.0 0.308879 34467 36070 1778-1783 1.000000 78.9 trnT-GGU-psbD_p2 trnT-GGU-psbD 2 ATTGAATCAAACGGGCCCTT ACAAAAACGAAACGGTCCCT 20 20 45.0 45.0 58.1 58.2 22.4 0.0 0.308879 34467 36070 1777-1782 1.000000 78.9 trnT-GGU-psbD_p3 trnT-GGU-psbD 3 AATTGAATCAAACGGGCCCT GACCGGACCAACCTACAAAA 20 20 45.0 50.0 58.1 57.7 22.4 9.5 0.322075 34467 36070 1792-1797 1.000000 78.8 trnT-GGU-psbD_p4 trnT-GGU-psbD 4 ATTGAATCAAACGGGCCCTT GACCGGACCAACCTACAAAA 20 20 45.0 50.0 58.1 57.7 22.4 9.5 0.322075 34467 36070 1791-1796 1.000000 78.8 trnT-GGU-psbD_p5 trnT-GGU-psbD 5 AACGGGCCCTTTTAACTCAG ACAAAAACGAAACGGTCCCT 20 20 50.0 45.0 58.1 58.2 22.4 0.0 0.340432 34467 36070 1768-1773 1.000000 78.7 psaA-ycf3_p1 psaA-ycf3 1 GCCCATTCCTCGAAAGAAGT TTGGTTGAAGATCACGAGGC 20 20 50.0 50.0 57.9 58.2 4.1 0.0 0.306932 45109 45757 760-762 1.000000 78.4 psaA-ycf3_p2 psaA-ycf3 2 GAGAAATGACCTGGTCTGGC TTGGTTGAAGATCACGAGGC 20 20 55.0 50.0 58.3 58.2 26.0 0.0 0.447593 45109 45757 778-780 1.000000 77.2 psaA-ycf3_p3 psaA-ycf3 3 GCCCATTCCTCGAAAGAAGT GCTATAGCGCTTACTCCAGG 20 20 50.0 55.0 57.9 57.6 4.1 18.7 0.471060 45109 45757 801-803 1.000000 77.0 psaA-ycf3_p4 psaA-ycf3 4 GCCCATTCCTCGAAAGAAGT TCACGAGGCGGTTTGAATAA 20 20 50.0 45.0 57.9 57.5 4.1 0.0 0.574403 45109 45757 749-751 1.000000 76.3 psaA-ycf3_p5 psaA-ycf3 5 GAGAAATGACCTGGTCTGGC GCTATAGCGCTTACTCCAGG 20 20 55.0 55.0 58.3 57.6 26.0 18.7 0.611721 45109 45757 819-821 1.000000 75.9 trnT-UGU-trnL-UAA_p1 trnT-UGU-trnL-UAA 1 GCGATGCTCTAACCTCTGAG ACCAATTTCGCCATATCCCC 20 20 55.0 50.0 57.9 58.0 0.0 0.0 0.137364 50013 50722 750-760 1.000000 81.1 trnT-UGU-trnL-UAA_p2 trnT-UGU-trnL-UAA 2 GCGATGCTCTAACCTCTGAG TAGCGTCTACCAATTTCGCC 20 20 55.0 50.0 57.9 58.1 0.0 0.0 0.202173 50013 50722 758-768 1.000000 80.6 trnT-UGU-trnL-UAA_p3 trnT-UGU-trnL-UAA 3 GGAATCGAACCGATGACCAT ACCAATTTCGCCATATCCCC 20 20 50.0 50.0 57.8 58.0 15.5 0.0 0.245117 50013 50722 782-792 1.000000 80.2 trnT-UGU-trnL-UAA_p4 trnT-UGU-trnL-UAA 4 GGAATCGAACCGATGACCAT TAGCGTCTACCAATTTCGCC 20 20 50.0 50.0 57.8 58.1 15.5 0.0 0.309926 50013 50722 790-800 1.000000 79.6 trnT-UGU-trnL-UAA_p5 trnT-UGU-trnL-UAA 5 GCGATGCTCTAACCTCTGAG ATCCAATCAAGTCCGTAGCG 20 20 55.0 50.0 57.9 57.8 0.0 0.0 0.357808 50013 50722 773-783 1.000000 79.3 trnF-GAA-ndhJ_p1 trnF-GAA-ndhJ 1 GGGATAGCTCAGCTGGTAGA GTTGGATAGGATGGCCCTTG 20 20 55.0 55.0 58.0 58.0 10.3 0.0 0.015623 51770 52476 844-848 1.000000 81.1 trnF-GAA-ndhJ_p2 trnF-GAA-ndhJ 2 CCTCGTGTCACCAGTTCAAA GTTGGATAGGATGGCCCTTG 20 20 50.0 55.0 58.1 58.0 0.0 0.0 0.065013 51770 52476 808-812 1.000000 80.8 trnF-GAA-ndhJ_p3 trnF-GAA-ndhJ 3 GGGATAGCTCAGCTGGTAGA AGTTGGATAGGATGGCCCTT 20 20 55.0 50.0 58.0 58.1 10.3 0.0 0.089643 51770 52476 845-849 1.000000 80.5 trnF-GAA-ndhJ_p4 trnF-GAA-ndhJ 4 CCTCGTGTCACCAGTTCAAA AGTTGGATAGGATGGCCCTT 20 20 50.0 50.0 58.1 58.1 0.0 0.0 0.139034 51770 52476 809-813 1.000000 80.2 trnF-GAA-ndhJ_p5 trnF-GAA-ndhJ 5 CTGGTAGAGCAGAGGACTGA GTTGGATAGGATGGCCCTTG 20 20 55.0 55.0 57.9 58.0 2.5 0.0 0.149416 51770 52476 832-836 1.000000 80.1 petA-psbJ_p1 petA-psbJ 1 GGACGCCAAGTGGTTGATAT AACTGGCCGTTTTGATCCTT 20 20 50.0 45.0 58.0 58.0 0.0 0.0 0.043011 67863 68983 1957-1959 1.000000 80.8 petA-psbJ_p2 petA-psbJ 2 GGACGCCAAGTGGTTGATAT ACTGGCCGTTTTGATCCTTT 20 20 50.0 45.0 58.0 58.0 0.0 0.0 0.043011 67863 68983 1956-1958 1.000000 80.8 petA-psbJ_p3 petA-psbJ 3 GGACGCCAAGTGGTTGATAT ACACAATCAAACCCGAACGA 20 20 50.0 45.0 58.0 58.0 0.0 0.0 0.082090 67863 68983 1743-1745 1.000000 80.6 petA-psbJ_p4 petA-psbJ 4 GGACGCCAAGTGGTTGATAT GGACTAGCTGTACCTACCGT 20 20 50.0 55.0 58.0 58.0 0.0 0.0 0.088275 67863 68983 1839-1841 1.000000 80.5 petA-psbJ_p5 petA-psbJ 5 GGACGCCAAGTGGTTGATAT GAGCCGACAAGGAATTCCAT 20 20 50.0 50.0 58.0 58.0 0.0 26.2 0.082510 67863 68983 1981-1983 1.000000 80.4 ndhF_p1 ndhF 1 TCCACCTAGTTTGTCAGCTT TGACCAATTGTAACTTCTTGA 20 21 45.0 33.3 56.4 53.0 0.0 4.4 7.630980 116189 118567 2476-2567 1.000000 40.7 ndhF_p2 ndhF 2 TCCACCTAGTTTGTCAGCTT TTGACCAATTGTAACTTCTTGA 20 22 45.0 31.8 56.4 53.9 0.0 4.4 7.751563 116189 118567 2477-2568 1.000000 40.7 ndhF_p3 ndhF 3 TCCACCTAGTTTGTCAGCTT TGATTTGATCATTTGACCAATTGT 20 24 45.0 29.2 56.4 55.8 0.0 4.4 7.797833 116189 118567 2489-2580 1.000000 40.7 ndhF_p4 ndhF 4 TCCACCTAGTTTGTCAGCTT TCATTTGACCAATTGTAACTTCTTGA 20 26 45.0 30.8 56.4 57.8 0.0 4.4 7.850532 116189 118567 2481-2572 1.000000 40.7 ndhF_p5 ndhF 5 TCCACCTAGTTTGTCAGCTT TGACCAATTGTAACTTCTTGATTTGA 20 26 45.0 30.8 56.4 57.8 0.0 4.4 7.850532 116189 118567 2476-2567 1.000000 40.7 ccsA-ndhD_p1 ccsA-ndhD 1 AGGGCTACATAGTTATGGTTCA TCCGGATTTCGTTCTCTCAC 22 20 40.9 50.0 56.3 57.4 4.3 0.0 4.324545 121858 122118 374-384 1.000000 50.0 ccsA-ndhD_p2 ccsA-ndhD 2 AGGGCTACATAGTTATGGTTCA CCGGATTTCGTTCTCTCACT 22 20 40.9 50.0 56.3 57.3 4.3 0.0 4.331774 121858 122118 373-383 1.000000 50.0 ccsA-ndhD_p3 ccsA-ndhD 3 AGGGCTACATAGTTATGGTTCAT TCCGGATTTCGTTCTCTCAC 23 20 39.1 50.0 56.8 57.4 4.3 0.0 4.822522 121858 122118 374-384 1.000000 46.1 ccsA-ndhD_p4 ccsA-ndhD 4 AGGGCTACATAGTTATGGTTCAT CCGGATTTCGTTCTCTCACT 23 20 39.1 50.0 56.8 57.3 4.3 0.0 4.829751 121858 122118 373-383 1.000000 46.0 ccsA-ndhD_p5 ccsA-ndhD 5 AGGGCTACATAGTTATGGTTCA ATCCGGATTTCGTTCTCTCAC 22 21 40.9 47.6 56.3 57.8 4.3 12.4 4.841703 121858 122118 375-385 1.000000 45.9 ycf1_p1 ycf1 1 ACCGCAGTTCCTTATGTTGT TGTCGAGAAAGAGGAAATGCT 20 21 45.0 42.9 57.4 57.3 0.0 0.0 2.246617 130800 130919 240-240 1.000000 63.7 ycf1_p2 ycf1 2 ACCGCAGTTCCTTATGTTGT TCGAGAAAGAGGAAATGCTGA 20 21 45.0 42.9 57.4 57.0 0.0 0.0 2.522958 130800 130919 238-238 1.000000 61.5 ycf1_p3 ycf1 3 TGACCGCAGTTCCTTATGTT TGTCGAGAAAGAGGAAATGCT 20 21 45.0 42.9 57.1 57.3 0.0 0.0 2.536402 130800 130919 242-242 1.000000 61.4 ycf1_p4 ycf1 4 TTGACCGCAGTTCCTTATGT TGTCGAGAAAGAGGAAATGCT 20 21 45.0 42.9 57.1 57.3 0.0 0.0 2.536402 130800 130919 243-243 1.000000 61.4 ycf1_p5 ycf1 5 ACCGCAGTTCCTTATGTTGT GTCGAGAAAGAGGAAATGCTG 20 21 45.0 47.6 57.4 57.0 0.0 0.0 2.568367 130800 130919 239-239 1.000000 61.1 rps19-rpl22_p1 rps19-rpl22 1 TGGGTAGAGCCGGATCTAAG CGCTTTCTCCATTAGCCCAT 20 20 55.0 50.0 58.0 58.0 29.9 0.0 0.030330 161743 161801 1104-1104 0.500000 59.8 rps19-rpl22_p2 rps19-rpl22 2 CCACAATGATCGGCCATACA CGCTTTCTCCATTAGCCCAT 20 20 50.0 50.0 58.0 58.0 2.2 0.0 0.061193 161743 161801 698-698 0.500000 59.5 rps19-rpl22_p3 rps19-rpl22 3 TGGGTAGAGCCGGATCTAAG CGTTGACTTCGGCTTGACTA 20 20 55.0 50.0 58.0 57.9 29.9 0.0 0.063527 161743 161801 873-873 0.500000 59.5 rps19-rpl22_p4 rps19-rpl22 4 TGGGTAGAGCCGGATCTAAG ATTCCCTCGACACCTGAAGA 20 20 55.0 50.0 58.0 58.1 29.9 0.0 0.064617 161743 161801 1314-1314 0.500000 59.5 rps19-rpl22_p5 rps19-rpl22 5 TGGGTAGAGCCGGATCTAAG TTCCCTCGACACCTGAAGAT 20 20 55.0 50.0 58.0 58.1 29.9 0.0 0.064617 161743 161801 1313-1313 0.500000 59.5 rpl22_p1 rpl22 1 TGGGTAGAGCCGGATCTAAG TTCCTCGTGGTTTACCCTCT 20 20 55.0 50.0 58.0 58.0 29.9 3.0 0.023009 161802 162332 1409-1409 0.500000 59.8 rpl22_p2 rpl22 2 CCACAATGATCGGCCATACA TTCCTCGTGGTTTACCCTCT 20 20 50.0 50.0 58.0 58.0 2.2 3.0 0.053873 161802 162332 1003-1003 0.500000 59.6 rpl22_p3 rpl22 3 TGGGTAGAGCCGGATCTAAG CCATTATTCCTCGTCCGCAA 20 20 55.0 50.0 58.0 58.1 29.9 0.0 0.055097 161802 162332 1795-1795 0.500000 59.6 rpl22_p4 rpl22 4 TGGGTAGAGCCGGATCTAAG CCTCGTCCGCAAATATCCAA 20 20 55.0 50.0 58.0 58.1 29.9 0.0 0.055097 161802 162332 1787-1787 0.500000 59.6 rpl22_p5 rpl22 5 TCCCGGGCATCTACCATTAT TTCCTCGTGGTTTACCCTCT 20 20 50.0 50.0 58.0 58.0 18.5 3.0 0.058670 161802 162332 1025-1025 0.500000 59.5