primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnH-GUG-psbA_p1 trnH-GUG-psbA 1 GATCCACTTGGCTACATCCG TTCCCTCTAGACCTAGCTGC 20 20 55.0 55.0 58.1 57.9 0.0 0.0 0.203648 102 519 488-498 1.000000 83.3 trnH-GUG-psbA_p2 trnH-GUG-psbA 2 CAATCCACTGCCTTGATCCA TTCCCTCTAGACCTAGCTGC 20 20 50.0 55.0 57.9 57.9 0.0 0.0 0.208010 102 519 502-512 1.000000 83.1 trnH-GUG-psbA_p3 trnH-GUG-psbA 3 AATCCACTGCCTTGATCCAC TTCCCTCTAGACCTAGCTGC 20 20 50.0 55.0 57.9 57.9 0.0 0.0 0.209518 102 519 501-511 1.000000 83.1 trnH-GUG-psbA_p4 trnH-GUG-psbA 4 ACAATCCACTGCCTTGATCC TTCCCTCTAGACCTAGCTGC 20 20 50.0 55.0 57.9 57.9 0.0 0.0 0.209518 102 519 503-513 1.000000 83.1 trnH-GUG-psbA_p5 trnH-GUG-psbA 5 GATCCACTTGGCTACATCCG CCGTGCTAACCTTGGTATGG 20 20 55.0 55.0 58.1 58.3 0.0 0.0 0.465225 102 519 537-547 1.000000 80.7 trnK-UUU-rps16_p1 trnK-UUU-rps16 1 TCAGTCGTGGTCTTCCAAAC TTGAAAAAGGGGCTCAACCT 20 20 50.0 45.0 57.8 57.5 0.0 0.0 0.704356 4386 5075 816-916 1.000000 81.3 trnK-UUU-rps16_p2 trnK-UUU-rps16 2 AAAAGACACTAGCCGCACTT TTGAAAAAGGGGCTCAACCT 20 20 45.0 45.0 57.7 57.5 0.0 0.0 0.726174 4386 5075 752-852 1.000000 81.3 trnK-UUU-rps16_p3 trnK-UUU-rps16 3 CAGTCGTGGTCTTCCAAACT TTGAAAAAGGGGCTCAACCT 20 20 50.0 45.0 57.8 57.5 0.0 0.0 0.710550 4386 5075 815-915 1.000000 81.2 trnK-UUU-rps16_p4 trnK-UUU-rps16 4 TCAGTCGTGGTCTTCCAAAC AAAAGGGGCTCAACCTACAG 20 20 50.0 50.0 57.8 57.4 0.0 0.0 0.820948 4386 5075 812-912 1.000000 80.4 trnK-UUU-rps16_p5 trnK-UUU-rps16 5 CAGTCGTGGTCTTCCAAACT AAAAGGGGCTCAACCTACAG 20 20 50.0 50.0 57.8 57.4 0.0 0.0 0.827142 4386 5075 811-911 1.000000 80.3 rps16-trnQ-UUG_p1 rps16-trnQ-UUG 1 AACGGATCGTGTCCTTCAAG GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 57.9 58.1 7.8 16.9 0.156387 6165 7066 975-1007 1.000000 85.0 rps16-trnQ-UUG_p2 rps16-trnQ-UUG 2 AAGTCGCACGTTGCTTTCTA GAGGTTCGAATCCTTCCGTC 20 20 45.0 55.0 58.1 58.1 8.1 16.9 0.215425 6165 7066 958-990 1.000000 84.6 rps16-trnQ-UUG_p3 rps16-trnQ-UUG 3 CAACGGATCGTGTCCTTCAA GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 58.2 58.1 7.8 16.9 0.285346 6165 7066 976-1008 1.000000 84.0 rps16-trnQ-UUG_p4 rps16-trnQ-UUG 4 CGGATCGTGTCCTTCAAGTC GAGGTTCGAATCCTTCCGTC 20 20 55.0 55.0 58.4 58.1 7.8 16.9 0.445953 6165 7066 973-1005 1.000000 82.7 rps16-trnQ-UUG_p5 rps16-trnQ-UUG 5 GGATCGTGTCCTTCAAGTCG GAGGTTCGAATCCTTCCGTC 20 20 55.0 55.0 58.4 58.1 2.9 16.9 0.445953 6165 7066 972-1004 1.000000 82.7 atpH-atpI_p1 atpH-atpI 1 ATAACGGAAGCGGCAGAAAT TACCTGTCATGCTCCTTGGA 20 20 45.0 50.0 58.0 58.0 1.4 0.0 0.087178 13614 14836 1298-1389 1.000000 85.6 atpH-atpI_p2 atpH-atpI 2 TACCCTCTACAGCTTGACCC TACCTGTCATGCTCCTTGGA 20 20 55.0 50.0 58.1 58.0 0.0 0.0 0.186809 13614 14836 1381-1472 1.000000 84.7 atpH-atpI_p3 atpH-atpI 3 GCGATACCCTCTACAGCTTG TACCTGTCATGCTCCTTGGA 20 20 55.0 50.0 57.9 58.0 0.0 0.0 0.190326 13614 14836 1385-1476 1.000000 84.7 atpH-atpI_p4 atpH-atpI 4 AATAACGGAAGCGGCAGAAA TACCTGTCATGCTCCTTGGA 20 20 45.0 50.0 58.2 58.0 1.4 0.0 0.232716 13614 14836 1299-1390 1.000000 84.5 atpH-atpI_p5 atpH-atpI 5 GCCAATCCAGCAGCAATAAC TACCTGTCATGCTCCTTGGA 20 20 50.0 50.0 57.8 58.0 0.0 0.0 0.263178 13614 14836 1313-1404 1.000000 84.2 rpoC1-rpoB_p1 rpoC1-rpoB 1 TGGCCCAAGCACTTATTTGT TTGCTCGTTCGAGAACTACG 20 20 45.0 50.0 58.0 58.0 0.0 23.5 0.048496 23856 23881 187-192 1.000000 84.2 rpoC1-rpoB_p2 rpoC1-rpoB 2 TTTTAGTGGCCCAAGCACTT TTGCTCGTTCGAGAACTACG 20 20 45.0 50.0 57.9 58.0 0.0 23.5 0.120907 23856 23881 193-198 1.000000 83.5 rpoC1-rpoB_p3 rpoC1-rpoB 3 TGGCCCAAGCACTTATTTGT CCCGAAGATGCTCCAGAATC 20 20 45.0 55.0 58.0 58.1 0.0 0.0 0.131920 23856 23881 214-219 1.000000 83.0 rpoC1-rpoB_p4 rpoC1-rpoB 4 AGGATTTTAGTGGCCCAAGC TTGCTCGTTCGAGAACTACG 20 20 50.0 50.0 58.1 58.0 0.0 23.5 0.187620 23856 23881 197-202 1.000000 82.9 rpoC1-rpoB_p5 rpoC1-rpoB 5 TTTTAGTGGCCCAAGCACTT CCCGAAGATGCTCCAGAATC 20 20 45.0 55.0 57.9 58.1 0.0 0.0 0.204332 23856 23881 220-225 1.000000 82.3 rpoB-trnC-GCA_p1 rpoB-trnC-GCA 1 CTCATTTCCATCCCCGAGC CCGGATTTGAACTGGGGAAA 19 20 57.9 50.0 58.0 58.1 0.0 0.0 1.094688 27095 28399 1374-1405 1.000000 75.6 rpoB-trnC-GCA_p2 rpoB-trnC-GCA 2 ATTCCCTCATTTCCATCCCC CCGGATTTGAACTGGGGAAA 20 20 50.0 50.0 56.9 58.1 0.0 0.0 1.163184 27095 28399 1379-1410 1.000000 75.0 rpoB-trnC-GCA_p3 rpoB-trnC-GCA 3 TCATTTCCATCCCCGAGCAT CCGGATTTGAACTGGGGAAA 20 20 50.0 50.0 59.2 58.1 0.0 0.0 1.236113 27095 28399 1373-1404 1.000000 74.4 rpoB-trnC-GCA_p4 rpoB-trnC-GCA 4 CTCATTTCCATCCCCGAGC AGTCCTCTGCCTTACCACTC 19 20 57.9 55.0 58.0 58.4 0.0 0.0 1.449777 27095 28399 1343-1374 1.000000 72.8 rpoB-trnC-GCA_p5 rpoB-trnC-GCA 5 CATTTCCATCCCCGAGCAT CCGGATTTGAACTGGGGAAA 19 20 52.6 50.0 57.6 58.1 0.0 0.0 1.509031 27095 28399 1372-1403 1.000000 72.3 psbM-trnD-GUC_p1 psbM-trnD-GUC 1 AGTAGAAAAGCGGTAGGAACT CCCGTATTTCCCTGGGATTG 21 20 42.9 55.0 56.4 58.0 0.0 17.9 2.629866 30416 31490 1005-1249 1.000000 64.4 psbM-trnD-GUC_p2 psbM-trnD-GUC 2 AGTAGAAAAGCGGTAGGAACT TCCCGTATTTCCCTGGGATT 21 20 42.9 50.0 56.4 58.1 0.0 17.9 2.709475 30416 31490 1006-1250 1.000000 63.7 psbM-trnD-GUC_p3 psbM-trnD-GUC 3 AAGTAGAAAAGCGGTAGGAACT CCCGTATTTCCCTGGGATTG 22 20 40.9 55.0 57.1 58.0 0.0 17.9 2.905239 30416 31490 1006-1250 1.000000 62.2 psbM-trnD-GUC_p4 psbM-trnD-GUC 4 AGAAAAGCGGTAGGAACTAGA CCCGTATTTCCCTGGGATTG 21 20 42.9 55.0 56.1 58.0 0.0 17.9 2.908951 30416 31490 1002-1246 1.000000 62.1 psbM-trnD-GUC_p5 psbM-trnD-GUC 5 AAGTAGAAAAGCGGTAGGAACT TCCCGTATTTCCCTGGGATT 22 20 40.9 50.0 57.1 58.1 0.0 17.9 2.984848 30416 31490 1007-1251 1.000000 61.5 trnS-GGA-rps4_p1 trnS-GGA-rps4 1 AGGCTTTTGTTTACCGAGGG TTTGACCCTTCACCCATTCC 20 20 50.0 50.0 58.1 57.7 0.0 0.0 0.396950 46796 47132 485-507 1.000000 83.3 trnS-GGA-rps4_p2 trnS-GGA-rps4 2 AGGCTTTTGTTTACCGAGGG GACCCTTCACCCATTCCAAT 20 20 50.0 50.0 58.1 57.5 0.0 0.0 0.626612 46796 47132 482-504 1.000000 81.4 trnS-GGA-rps4_p3 trnS-GGA-rps4 3 GGCTTTTGTTTACCGAGGGT TTTGACCCTTCACCCATTCC 20 20 50.0 50.0 58.4 57.7 0.0 0.0 0.689911 46796 47132 484-506 1.000000 80.9 trnS-GGA-rps4_p4 trnS-GGA-rps4 4 ATGTAGGAGAGATGGCCGAG TTTGACCCTTCACCCATTCC 20 20 55.0 50.0 58.4 57.7 0.0 0.0 0.675901 46796 47132 537-559 1.000000 80.8 trnS-GGA-rps4_p5 trnS-GGA-rps4 5 CACTCGGTTTTGGGGTCATA TTTGACCCTTCACCCATTCC 20 20 50.0 50.0 57.5 57.7 0.0 0.0 0.785602 46796 47132 563-585 1.000000 79.8 ndhC-trnV-UAC_p1 ndhC-trnV-UAC 1 TTGCTAATCGGGGCTAACAC AGAAGGTCTACGGTTCGAGT 20 20 50.0 50.0 58.0 57.8 0.0 0.0 0.229964 52229 53360 1197-1297 1.000000 84.6 ndhC-trnV-UAC_p2 ndhC-trnV-UAC 2 CCCCGGAAATGAAAAATGCC AGAAGGTCTACGGTTCGAGT 20 20 50.0 50.0 58.0 57.8 0.7 0.0 0.220048 52229 53360 1178-1278 0.980769 83.8 ndhC-trnV-UAC_p3 ndhC-trnV-UAC 3 GCTAACACCCCGGAAATGAA AGAAGGTCTACGGTTCGAGT 20 20 50.0 50.0 58.2 57.8 0.7 0.0 0.368304 52229 53360 1185-1285 1.000000 83.5 ndhC-trnV-UAC_p4 ndhC-trnV-UAC 4 CCTTTGCTAATCGGGGCTAA AGAAGGTCTACGGTTCGAGT 20 20 50.0 50.0 57.7 57.8 0.0 0.0 0.539129 52229 53360 1200-1300 1.000000 82.1 ndhC-trnV-UAC_p5 ndhC-trnV-UAC 5 CCCCGGAAATGAAAAATGCC GAAGGTCTACGGTTCGAGTC 20 20 50.0 55.0 58.0 57.5 0.7 0.0 0.563820 52229 53360 1177-1277 0.980769 81.0 rbcL_p1 rbcL 1 GAGTTGTAGGGAGGGATTT TGGGCCGAGTTTAATTGCAA 19 20 47.4 45.0 53.4 58.4 0.0 0.0 6.018452 57206 58660 1547-1574 1.000000 41.6 rbcL_p2 rbcL 2 GAGTTGTAGGGAGGGATTT TTGGGCCGAGTTTAATTGCA 19 20 47.4 45.0 53.4 58.4 0.0 0.0 6.018452 57206 58660 1548-1575 1.000000 41.6 rbcL_p3 rbcL 3 GAGTTGTAGGGAGGGATTT ATTGGGCCGAGTTTAATTGC 19 20 47.4 45.0 53.4 57.0 0.0 0.0 6.599951 57206 58660 1549-1576 1.000000 41.6 rbcL_p4 rbcL 4 GAGTTGTAGGGAGGGATTT GGGCCGAGTTTAATTGCAAT 19 20 47.4 45.0 53.4 57.0 0.0 6.0 6.599951 57206 58660 1546-1573 1.000000 41.6 rbcL_p5 rbcL 5 GAGTTGTAGGGAGGGATTT AGTAAAAGATTGGGCCGAGT 19 20 47.4 45.0 53.4 56.8 0.0 0.0 6.814458 57206 58660 1557-1584 1.000000 41.6 rbcL-accD_p1 rbcL-accD 1 ACTACAGTTCGGTGGAGGAA ACTGGAACCCTCGTTTTCAC 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.042198 58661 59454 1594-1654 1.000000 84.1 rbcL-accD_p2 rbcL-accD 2 ACTACAGTTCGGTGGAGGAA CAATAGGACCAAGACTGCCC 20 20 50.0 55.0 58.0 58.0 0.0 0.0 0.049493 58661 59454 1136-1178 1.000000 83.8 rbcL-accD_p3 rbcL-accD 3 AGAATTGGGTGTTCCGATCG ACTGGAACCCTCGTTTTCAC 20 20 50.0 50.0 58.0 58.0 8.5 0.0 0.061004 58661 59454 2017-2077 1.000000 83.3 rbcL-accD_p4 rbcL-accD 4 AGAATTGGGTGTTCCGATCG CAATAGGACCAAGACTGCCC 20 20 50.0 55.0 58.0 58.0 8.5 0.0 0.068298 58661 59454 1559-1601 1.000000 82.9 rbcL-accD_p5 rbcL-accD 5 GCATGACTACTTAACGGGGG ACTGGAACCCTCGTTTTCAC 20 20 55.0 50.0 58.1 58.0 0.0 0.0 0.087363 58661 59454 1993-2053 0.980769 82.3 ycf4-cemA_p1 ycf4-cemA 1 CATTCCCTTGACCCGTACTG GGAATTCCTGAGCCCAAGAG 20 20 55.0 55.0 58.0 58.0 0.0 17.7 0.074064 62647 63373 1249-1257 1.000000 82.0 ycf4-cemA_p2 ycf4-cemA 2 CGGAATTGCGGGTCTCTTTA GAAAGAAATCCACCAGGGCA 20 20 50.0 50.0 58.0 58.1 12.0 0.0 0.095186 62647 63373 1146-1154 1.000000 81.8 ycf4-cemA_p3 ycf4-cemA 3 TCTTTCTACGGAATTGCGGG GAAAGAAATCCACCAGGGCA 20 20 50.0 50.0 58.0 58.1 23.5 0.0 0.095186 62647 63373 1154-1162 1.000000 81.8 ycf4-cemA_p4 ycf4-cemA 4 CGGAATTGCGGGTCTCTTTA GGAATTCCTGAGCCCAAGAG 20 20 50.0 55.0 58.0 58.0 12.0 17.7 0.068430 62647 63373 1495-1503 1.000000 81.7 ycf4-cemA_p5 ycf4-cemA 5 TCTTTCTACGGAATTGCGGG GGAATTCCTGAGCCCAAGAG 20 20 50.0 55.0 58.0 58.0 23.5 17.7 0.068430 62647 63373 1503-1511 1.000000 81.7 petA-psbJ_p1 petA-psbJ 1 GAGAAGGTTCAATTGGCCGA ATTCCGGATTGGGTTCATCC 20 20 50.0 50.0 58.2 57.6 5.4 4.1 0.543756 65257 66333 1117-1147 1.000000 81.7 petA-psbJ_p2 petA-psbJ 2 TCGAGAAGGTTCAATTGGCC ATTCCGGATTGGGTTCATCC 20 20 50.0 50.0 58.2 57.6 5.4 4.1 0.543756 65257 66333 1119-1149 1.000000 81.7 petA-psbJ_p3 petA-psbJ 3 AGAAGGTTCAATTGGCCGAA ATTCCGGATTGGGTTCATCC 20 20 45.0 50.0 57.7 57.6 5.4 4.1 0.651337 65257 66333 1116-1146 1.000000 80.8 petA-psbJ_p4 petA-psbJ 4 ACGTGTCCAAGGACTTTTGT ATTCCGGATTGGGTTCATCC 20 20 45.0 50.0 57.6 57.6 19.2 4.1 0.778282 65257 66333 1196-1226 1.000000 79.7 petA-psbJ_p5 petA-psbJ 5 TCCATTACGTGTCCAAGGAC ATTCCGGATTGGGTTCATCC 20 20 50.0 50.0 57.2 57.6 12.3 4.1 1.119919 65257 66333 1202-1232 1.000000 76.9 clpP1_p1 clpP1 1 GATTTGCGCGAAATCCATGT ACGTTTCCACCTCAAAGTGA 20 20 45.0 45.0 57.8 57.3 23.4 0.0 0.895898 72405 74439 2087-2123 1.000000 75.7 clpP1_p2 clpP1 2 CAAATCACAGATTTGCGCGA ACGTTTCCACCTCAAAGTGA 20 20 45.0 45.0 57.8 57.3 12.1 0.0 0.948387 72405 74439 2096-2132 1.000000 75.2 clpP1_p3 clpP1 3 TCAAATCACAGATTTGCGCG ACGTTTCCACCTCAAAGTGA 20 20 45.0 45.0 57.8 57.3 21.6 0.0 0.948387 72405 74439 2097-2133 1.000000 75.2 clpP1_p4 clpP1 4 GATTTGCGCGAAATCCATGT ACGTTTCCACCTCAAAGTGAA 20 21 45.0 42.9 57.8 58.0 23.4 0.0 1.199369 72405 74439 2087-2123 1.000000 73.3 clpP1_p5 clpP1 5 CAAATCACAGATTTGCGCGA ACGTTTCCACCTCAAAGTGAA 20 21 45.0 42.9 57.8 58.0 12.1 0.0 1.251858 72405 74439 2096-2132 1.000000 72.8 rpl36-rps8_p1 rpl36-rps8 1 ACTATAATTCGTCCCCGCCT GAGAGGCTCGACTAGAAGGA 20 20 50.0 55.0 58.3 57.7 0.0 9.2 0.622018 82086 82531 573-625 1.000000 79.8 rpl36-rps8_p2 rpl36-rps8 2 ACTATAATTCGTCCCCGCCT TCCGCGAATTTTAGGTGGAA 20 20 50.0 45.0 58.3 57.5 0.0 8.2 0.762829 82086 82531 638-690 1.000000 78.1 rpl36-rps8_p3 rpl36-rps8 3 ACTATAATTCGTCCCCGCCT TTCCGCGAATTTTAGGTGGA 20 20 50.0 45.0 58.3 57.5 0.0 8.2 0.762829 82086 82531 639-691 1.000000 78.1 rpl36-rps8_p4 rpl36-rps8 4 ACTATAATTCGTCCCCGCCT AGAGGCTCGACTAGAAGGAA 20 20 50.0 50.0 58.3 57.2 0.0 9.2 1.097572 82086 82531 572-624 1.000000 76.0 rpl36-rps8_p5 rpl36-rps8 5 ACTATAATTCGTCCCCGCCT TCCGCGAATTTTAGGTGGAAT 20 21 50.0 42.9 58.3 58.0 0.0 8.2 1.292765 82086 82531 638-690 1.000000 73.9 ndhF_p1 ndhF 1 ACAGGAACAAGAGGGATCCA TGACGCCTTTCAAAAGAGGT 20 20 50.0 45.0 58.0 57.7 15.2 4.1 0.386639 112091 114313 2497-2520 0.576923 62.3 ndhF_p2 ndhF 2 AGGGTGGAAAGTGAGGAAGA TGACGCCTTTCAAAAGAGGT 20 20 50.0 45.0 57.9 57.7 0.0 4.1 0.460250 112091 114313 2562-2585 0.576923 61.6 ndhF_p3 ndhF 3 CGGACAAAATCGACGAAACG TGACGCCTTTCAAAAGAGGT 20 20 50.0 45.0 58.2 57.7 0.0 4.1 0.493571 112091 114313 2423-2446 0.576923 61.5 ndhF_p4 ndhF 4 GATCCGGACAAAATCGACGA TGACGCCTTTCAAAAGAGGT 20 20 50.0 45.0 58.1 57.7 6.1 4.1 0.424574 112091 114313 2442-2442 0.057692 38.9 ndhF_p5 ndhF 5 TCCGGACAAAATCGACGAAA TGACGCCTTTCAAAAGAGGT 20 20 45.0 45.0 57.8 57.7 0.0 4.1 0.493727 112091 114313 2440-2440 0.057692 38.4 rpl32-trnL-UAG_p1 rpl32-trnL-UAG 1 AGCGAAATCTCTTTCTACCGG TCCTAAGAGCAGCGTGTCTA 21 20 47.6 50.0 57.8 57.9 0.0 0.0 1.290766 115276 116038 869-899 1.000000 73.8 rpl32-trnL-UAG_p2 rpl32-trnL-UAG 2 AGCGAAATCTCTTTCTACCGG TCGAACCGAGATGCATTAGC 21 20 47.6 50.0 57.8 58.1 0.0 0.0 1.313547 115276 116038 895-925 1.000000 73.5 rpl32-trnL-UAG_p3 rpl32-trnL-UAG 3 AGCGAAATCTCTTTCTACCGG AGCAGCGTGTCTACCAATTT 21 20 47.6 45.0 57.8 57.8 0.0 0.0 1.351493 115276 116038 862-892 1.000000 73.4 rpl32-trnL-UAG_p4 rpl32-trnL-UAG 4 AGCGAAATCTCTTTCTACCGG CCTAAGAGCAGCGTGTCTAC 21 20 47.6 55.0 57.8 57.8 0.0 0.0 1.362784 115276 116038 868-898 1.000000 73.3 rpl32-trnL-UAG_p5 rpl32-trnL-UAG 5 AGCGAAATCTCTTTCTACCGG CTAAGAGCAGCGTGTCTACC 21 20 47.6 55.0 57.8 57.8 0.0 0.0 1.362784 115276 116038 867-897 1.000000 73.3 ccsA_p1 ccsA 1 GGCATACCGTCTTCTAAAAAGG ATTTGGAATAACTTGTCTTGAAT 22 23 45.5 26.1 57.1 52.6 0.0 0.0 11.296283 116222 117163 1072-1073 1.000000 41.0 ccsA_p2 ccsA 2 GGCATACCGTCTTCTAAAAAGGA ATTTGGAATAACTTGTCTTGAAT 23 23 43.5 26.1 58.5 52.6 0.0 0.0 11.908389 116222 117163 1072-1073 1.000000 41.0 ccsA_p3 ccsA 3 TGAATTCAATTCCCGATTTCCA ATTTGGAATAACTTGTCTTGAAT 22 23 36.4 26.1 56.3 52.6 5.4 0.0 12.109067 116222 117163 1033-1034 1.000000 41.0 ccsA_p4 ccsA 4 GCATACCGTCTTCTAAAAAGGA ATTTGGAATAACTTGTCTTGAAT 22 23 40.9 26.1 56.2 52.6 0.0 0.0 12.236456 116222 117163 1071-1072 1.000000 41.0 ccsA_p5 ccsA 5 TGAATTCAATTCCCGATTTCCAT ATTTGGAATAACTTGTCTTGAAT 23 23 34.8 26.1 56.8 52.6 5.4 0.0 12.612870 116222 117163 1033-1034 1.000000 41.0 ndhG_p1 ndhG 1 TTCGAATCAACCCCCTTCTG CGAGGCCGAATACACTTTGA 20 20 50.0 50.0 57.5 58.0 0.0 0.0 0.494521 120046 120576 1936-1975 0.961538 77.6 ndhG_p2 ndhG 2 TTCGAATCAACCCCCTTCTG ATTGCGTTGAGTATTGCCCA 20 20 50.0 45.0 57.5 58.2 0.0 0.0 0.657055 120046 120576 1770-1809 0.961538 76.5 ndhG_p3 ndhG 3 TTCGAATCAACCCCCTTCTG AAATCGCTTTGGGTCGCTTA 20 20 50.0 45.0 57.5 58.2 0.0 0.0 0.673864 120046 120576 1680-1719 0.961538 76.5 ndhG_p4 ndhG 4 TTCGAATCAACCCCCTTCTG GCTTGTGAAGTATGTGTGCG 20 20 50.0 50.0 57.5 57.8 0.0 0.0 0.722177 120046 120576 1900-1939 0.961538 75.8 ndhG_p5 ndhG 5 TTCGAATCAACCCCCTTCTG TGTGAAGTATGTGTGCGTGT 20 20 50.0 45.0 57.5 57.8 0.0 0.0 0.722695 120046 120576 1897-1936 0.961538 75.8 ycf1_p1 ycf1 1 ACGGCCTGTTCAAATCGATT CGGACAAAATCGACGAAACG 20 20 45.0 50.0 58.2 58.2 4.4 0.0 0.330508 130320 130439 313-319 1.000000 84.1 ycf1_p2 ycf1 2 ACGGCCTGTTCAAATCGATT CCGGACAAAATCGACGAAAC 20 20 45.0 50.0 58.2 57.8 4.4 0.0 0.400583 130320 130439 314-320 1.000000 83.6 ycf1_p3 ycf1 3 ACGGCCTGTTCAAATCGATT GGACAAAATCGACGAAACGG 20 20 45.0 50.0 58.2 57.8 4.4 0.0 0.400583 130320 130439 312-318 1.000000 83.6 ycf1_p4 ycf1 4 ACGGCCTGTTCAAATCGATT GATCCGGACAAAATCGACGA 20 20 45.0 50.0 58.2 58.1 4.4 6.1 0.261511 130320 130439 323-323 0.057692 40.5 ycf1_p5 ycf1 5 ACGGCCTGTTCAAATCGATT TCCGGACAAAATCGACGAAA 20 20 45.0 45.0 58.2 57.8 4.4 0.0 0.330664 130320 130439 321-321 0.057692 39.9