primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnH-GUG-psbA_p1 trnH-GUG-psbA 1 GATCCACTTGGCTACATCCG CGAGGCTCCATCTATAAATGG 20 21 55.0 47.6 58.1 55.7 0.0 9.3 3.420017 122 361 287-297 1.000000 58.5 trnH-GUG-psbA_p2 trnH-GUG-psbA 2 AATCCACTGCCTTGATCCAC CGAGGCTCCATCTATAAATGG 20 21 50.0 47.6 57.9 55.7 0.0 9.3 3.425886 122 361 300-310 1.000000 58.2 trnH-GUG-psbA_p3 trnH-GUG-psbA 3 CAATCCACTGCCTTGATCCA CGAGGCTCCATCTATAAATGG 20 21 50.0 47.6 57.9 55.7 0.0 9.3 3.424378 122 361 301-311 1.000000 58.1 trnH-GUG-psbA_p4 trnH-GUG-psbA 4 ACAATCCACTGCCTTGATCC CGAGGCTCCATCTATAAATGG 20 21 50.0 47.6 57.9 55.7 0.0 9.3 3.425886 122 361 302-312 1.000000 58.1 trnH-GUG-psbA_p5 trnH-GUG-psbA 5 CGCATGGTGGATTCACAATC CGAGGCTCCATCTATAAATGG 20 21 50.0 47.6 57.5 55.7 6.4 9.3 3.771321 122 361 316-326 1.000000 55.1 trnF-GAA-trnL-UAA_p1 trnF-GAA-trnL-UAA 1 CATTTCTACTCTTCCCGCCC TTTCGCGTTGGGTTAGGAAA 20 20 55.0 45.0 58.0 58.0 0.0 5.8 0.080521 13261 13682 1098-1109 1.000000 84.8 trnF-GAA-trnL-UAA_p2 trnF-GAA-trnL-UAA 2 TTTGAACTGGTGACACGAGG TTTCGCGTTGGGTTAGGAAA 20 20 50.0 45.0 58.1 58.0 20.1 5.8 0.087343 13261 13682 792-804 1.000000 84.6 trnF-GAA-trnL-UAA_p3 trnF-GAA-trnL-UAA 3 CATTTCTACTCTTCCCGCCC GGGGATATGGCGAAATTGGT 20 20 55.0 50.0 58.0 58.0 0.0 0.0 0.049697 13261 13682 1334-1345 1.000000 84.3 trnF-GAA-trnL-UAA_p4 trnF-GAA-trnL-UAA 4 TTTGAACTGGTGACACGAGG GGGGATATGGCGAAATTGGT 20 20 50.0 50.0 58.1 58.0 20.1 0.0 0.056519 13261 13682 1028-1040 1.000000 83.9 trnF-GAA-trnL-UAA_p5 trnF-GAA-trnL-UAA 5 TTGGATAGGATGGCCTTTGC GGGGATATGGCGAAATTGGT 20 20 50.0 50.0 57.9 58.0 3.3 0.0 0.076401 13261 13682 1702-1714 1.000000 83.6 trnT-UGU-rps4_p1 trnT-UGU-rps4 1 CTCAGAGGTTAGAGCATCGC CTGCGGGCCTTTTACTAGTT 20 20 55.0 50.0 57.9 57.9 0.0 0.8 0.242165 14940 15225 413-430 1.000000 84.9 trnT-UGU-rps4_p2 trnT-UGU-rps4 2 CTCAGAGGTTAGAGCATCGC AGCGCGATTGGTTTCTAAGT 20 20 55.0 45.0 57.9 57.9 0.0 12.1 0.227502 14940 15225 449-466 1.000000 84.5 trnT-UGU-rps4_p3 trnT-UGU-rps4 3 ATGGTCATCGGTTCGATTCC CTGCGGGCCTTTTACTAGTT 20 20 50.0 50.0 57.8 57.9 0.0 0.8 0.349918 14940 15225 381-398 1.000000 84.3 trnT-UGU-rps4_p4 trnT-UGU-rps4 4 CTCAGAGGTTAGAGCATCGC TTTGTTTGAAACGAGGCCCT 20 20 55.0 45.0 57.9 58.2 0.0 0.0 0.362446 14940 15225 365-382 1.000000 84.3 trnT-UGU-rps4_p5 trnT-UGU-rps4 5 ATGGTCATCGGTTCGATTCC AGCGCGATTGGTTTCTAAGT 20 20 50.0 45.0 57.8 57.9 0.0 12.1 0.335256 14940 15225 417-434 1.000000 84.1 trnR-UCU-atpA_p1 trnR-UCU-atpA 1 GGTTCAAATCCTATTGGACGC TGAAGGAGGCTCTTCAGGAA 21 20 47.6 50.0 57.3 58.0 0.0 15.2 1.722818 18036 18428 436-488 1.000000 73.2 trnR-UCU-atpA_p2 trnR-UCU-atpA 2 GGTTCAAATCCTATTGGACGC GGCTCTTCAGGAACAGATCG 21 20 47.6 55.0 57.3 58.1 0.0 0.0 1.759544 18036 18428 429-481 1.000000 72.9 trnR-UCU-atpA_p3 trnR-UCU-atpA 3 GGTTCAAATCCTATTGGACGC GGAGAAGCAGAAGCCCTTTT 21 20 47.6 50.0 57.3 58.1 0.0 0.0 1.776285 18036 18428 455-507 1.000000 72.6 trnR-UCU-atpA_p4 trnR-UCU-atpA 4 GGTTCAAATCCTATTGGACGC TTCACTGGAGAAGCAGAAGC 21 20 47.6 50.0 57.3 57.8 0.0 0.0 1.868668 18036 18428 461-513 1.000000 71.9 trnR-UCU-atpA_p5 trnR-UCU-atpA 5 GGTTCAAATCCTATTGGACGC AAGGAGGCTCTTCAGGAACA 21 20 47.6 50.0 57.3 58.3 0.0 15.2 1.958136 18036 18428 434-486 1.000000 71.3 rpoC2_p1 rpoC2 1 TGCCAATTCAAATGGAATGGA GGCCCTTTAGGAATAACCGT 21 20 38.1 50.0 56.4 57.3 0.0 0.0 3.358276 25770 25889 215-215 1.000000 63.2 rpoC2_p2 rpoC2 2 TCGGGCTTATAAATTCTCTCGT GGCCCTTTAGGAATAACCGT 22 20 40.9 50.0 57.1 57.3 0.0 0.0 3.654983 25770 25889 170-170 1.000000 62.8 rpoC2_p3 rpoC2 3 TGCCAATTCAAATGGAATGGA GGCCCTTTAGGAATAACCGTT 21 21 38.1 47.6 56.4 58.0 0.0 0.0 3.643789 25770 25889 215-215 1.000000 60.9 rpoC2_p4 rpoC2 4 TGCCAATTCAAATGGAATGGA AGGCCCTTTAGGAATAACCG 21 20 38.1 50.0 56.4 57.0 0.0 0.0 3.658278 25770 25889 216-216 1.000000 60.7 rpoC2_p5 rpoC2 5 TGCCAATTCAAATGGAATGGAT GGCCCTTTAGGAATAACCGT 22 20 36.4 50.0 56.9 57.3 0.0 0.0 3.839869 25770 25889 215-215 1.000000 59.3 psaA-ycf3_p1 psaA-ycf3 1 TGCCCATTCCTCGAAAGAAG AGCCCTTACCCCTGGTAATT 20 20 50.0 50.0 57.9 58.0 4.1 6.2 0.117992 49309 50080 718-922 1.000000 85.2 psaA-ycf3_p2 psaA-ycf3 2 GCCCATTCCTCGAAAGAAGT AGCCCTTACCCCTGGTAATT 20 20 50.0 50.0 57.9 58.0 4.1 6.2 0.119474 49309 50080 717-921 1.000000 85.2 psaA-ycf3_p3 psaA-ycf3 3 TGCCCATTCCTCGAAAGAAG AGCTATAGCCCTTACCCCTG 20 20 50.0 55.0 57.9 58.0 4.1 21.2 0.145355 49309 50080 724-928 1.000000 84.9 psaA-ycf3_p4 psaA-ycf3 4 GCCCATTCCTCGAAAGAAGT AGCTATAGCCCTTACCCCTG 20 20 50.0 55.0 57.9 58.0 4.1 21.2 0.146838 49309 50080 723-927 1.000000 84.9 psaA-ycf3_p5 psaA-ycf3 5 TGCCCATTCCTCGAAAGAAG ATCAGGCCGCTGAATATTGG 20 20 50.0 50.0 57.9 58.1 4.1 0.0 0.212269 49309 50080 749-953 1.000000 84.3 ycf4-cemA_p1 ycf4-cemA 1 CATAGGACAGGGTGCCATTC CGTGTTTCCGGGTATTCCTT 20 20 55.0 50.0 58.0 57.9 0.0 0.0 0.130665 58386 58697 665-682 1.000000 83.2 ycf4-cemA_p2 ycf4-cemA 2 CATAGGACAGGGTGCCATTC TCGTTGTGCGTCTTGATCAA 20 20 55.0 45.0 58.0 58.1 0.0 8.1 0.167745 58386 58697 728-745 1.000000 82.9 ycf4-cemA_p3 ycf4-cemA 3 GGGGGTCTCGAAAAACAAGT CGTGTTTCCGGGTATTCCTT 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.126481 58386 58697 1062-1079 1.000000 82.1 ycf4-cemA_p4 ycf4-cemA 4 GGGGGTCTCGAAAAACAAGT TCGTTGTGCGTCTTGATCAA 20 20 50.0 45.0 58.0 58.1 0.0 8.1 0.163561 58386 58697 1125-1142 1.000000 81.8 ycf4-cemA_p5 ycf4-cemA 5 GGGGGTCTCGAAAAACAAGT TTCGTTGTGCGTCTTGATCA 20 20 50.0 45.0 58.0 58.1 0.0 0.0 0.163561 58386 58697 1126-1143 1.000000 81.8 petA-psbJ_p1 petA-psbJ 1 CTTGTGATAGGCCCTGTTCC TCCCTATTCATTGCGGGTTG 20 20 55.0 50.0 58.0 57.9 0.0 0.0 0.095457 60523 61691 2373-2388 1.000000 82.0 petA-psbJ_p2 petA-psbJ 2 CTTGTGATAGGCCCTGTTCC ATGTATTTGGAAGTCCCCGC 20 20 55.0 50.0 58.0 57.9 0.0 0.0 0.096905 60523 61691 2324-2339 1.000000 82.0 petA-psbJ_p3 petA-psbJ 3 CTTGTGATAGGCCCTGTTCC ATTCATTGCGGGTTGGCTAT 20 20 55.0 45.0 58.0 57.9 0.0 0.0 0.115900 60523 61691 2368-2383 1.000000 81.8 petA-psbJ_p4 petA-psbJ 4 CTTGTGATAGGCCCTGTTCC CATTGCGGGTTGGCTATTTG 20 20 55.0 50.0 58.0 58.1 0.0 0.0 0.118893 60523 61691 2365-2380 1.000000 81.8 petA-psbJ_p5 petA-psbJ 5 CTTGTGATAGGCCCTGTTCC TCAGCACGGGTTTAGCTTAC 20 20 55.0 50.0 58.0 57.9 0.0 0.0 0.133072 60523 61691 2345-2360 1.000000 81.7 petL-petG_p1 petL-petG 1 TTCGGTTTTCTACTAGCGGC CTAACTGATCACCACGTCGG 20 20 50.0 55.0 58.0 58.1 0.0 0.0 0.091054 63968 64130 344-344 1.000000 81.1 petL-petG_p2 petL-petG 2 CGGTTTTCTACTAGCGGCTT CTAACTGATCACCACGTCGG 20 20 50.0 55.0 58.0 58.1 8.3 0.0 0.096595 63968 64130 342-342 1.000000 81.1 petL-petG_p3 petL-petG 3 TCGGTTTTCTACTAGCGGCT CTAACTGATCACCACGTCGG 20 20 50.0 55.0 58.8 58.1 8.0 0.0 0.910596 63968 64130 343-343 1.000000 74.6 petL-petG_p4 petL-petG 4 TTCGGTTTTCTACTAGCGGC TCTAACTGATCACCACGTCG 20 20 50.0 50.0 58.0 57.1 0.0 0.0 0.914206 63968 64130 345-345 1.000000 74.5 petL-petG_p5 petL-petG 5 CGGTTTTCTACTAGCGGCTT TCTAACTGATCACCACGTCG 20 20 50.0 50.0 58.0 57.1 8.3 0.0 0.919748 63968 64130 343-343 1.000000 74.5 trnP-UGG-psaJ_p1 trnP-UGG-psaJ 1 ACCCGTGACATTTTGTACCC GCTAAAGCCCCGAACCATAA 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.146756 64647 65087 544-567 1.000000 85.8 trnP-UGG-psaJ_p2 trnP-UGG-psaJ 2 CCCGTGACATTTTGTACCCA GCTAAAGCCCCGAACCATAA 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.148100 64647 65087 543-566 1.000000 85.8 trnP-UGG-psaJ_p3 trnP-UGG-psaJ 3 ACAGGATTTGAACCCGTGAC GCTAAAGCCCCGAACCATAA 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.154792 64647 65087 555-578 1.000000 85.6 trnP-UGG-psaJ_p4 trnP-UGG-psaJ 4 CAGGATTTGAACCCGTGACA GCTAAAGCCCCGAACCATAA 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.156126 64647 65087 554-577 1.000000 85.6 trnP-UGG-psaJ_p5 trnP-UGG-psaJ 5 TGACAGGATTTGAACCCGTG GCTAAAGCCCCGAACCATAA 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.156126 64647 65087 557-580 1.000000 85.6 clpP_p1 clpP 1 GTTGGCATGGTGAGTCGTAT CATAGAGAGCCATCGAACCG 20 20 50.0 55.0 58.0 57.9 0.0 0.0 0.081679 68130 70117 2727-2795 1.000000 83.9 clpP_p2 clpP 2 GTTGGCATGGTGAGTCGTAT ACGAACATACCCTGTCTCCA 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.091154 68130 70117 2791-2859 1.000000 83.8 clpP_p3 clpP 3 ACCTCGCCGATACTGGAATA CATAGAGAGCCATCGAACCG 20 20 50.0 55.0 58.0 57.9 0.0 0.0 0.066382 68130 70117 2902-2970 1.000000 83.7 clpP_p4 clpP 4 CTGAACGAGTCGCACATACA CATAGAGAGCCATCGAACCG 20 20 50.0 55.0 58.0 57.9 13.6 0.0 0.080315 68130 70117 2848-2916 1.000000 83.7 clpP_p5 clpP 5 CTGAACGAGTCGCACATACA ACGAACATACCCTGTCTCCA 20 20 50.0 50.0 58.0 58.1 13.6 0.0 0.089790 68130 70117 2912-2980 1.000000 83.6 petD-rpoA_p1 petD-rpoA 1 GGTTGGGTATTGGAGCAACA CGAGAAATCGCGGATATCGT 20 20 50.0 50.0 58.1 58.0 0.0 6.1 0.117045 75992 76209 814-820 1.000000 82.3 petD-rpoA_p2 petD-rpoA 2 TGGTTGGGTATTGGAGCAAC CGAGAAATCGCGGATATCGT 20 20 50.0 50.0 58.1 58.0 0.0 6.1 0.117045 75992 76209 815-821 1.000000 82.3 petD-rpoA_p3 petD-rpoA 3 GTTTGATTCGTGCTTGAGCC GAAGCCTCCCGGAATTTGAT 20 20 50.0 50.0 58.0 57.9 0.0 0.7 0.089489 75992 76209 1124-1130 1.000000 82.0 petD-rpoA_p4 petD-rpoA 4 GTTTGATTCGTGCTTGAGCC CGAGAAATCGCGGATATCGT 20 20 50.0 50.0 58.0 58.0 0.0 6.1 0.065813 75992 76209 1318-1324 1.000000 81.8 petD-rpoA_p5 petD-rpoA 5 GTGCTTGAGCCGTATGATGA CGAGAAATCGCGGATATCGT 20 20 50.0 50.0 58.1 58.0 0.0 6.1 0.094942 75992 76209 1309-1315 1.000000 81.6 trnR-ACG-trnN-GUU_p1 trnR-ACG-trnN-GUU 1 CAGAGGATTAGAGCACGTGG CCGTTGTTCCTCAGTAGCTC 20 20 55.0 55.0 57.8 58.0 18.9 0.0 0.218238 106953 107527 715-716 1.000000 80.5 trnR-ACG-trnN-GUU_p2 trnR-ACG-trnN-GUU 2 GAACAGATCCAGTGGAGACG CCGTTGTTCCTCAGTAGCTC 20 20 55.0 55.0 57.7 58.0 18.7 0.0 0.288158 106953 107527 752-753 1.000000 79.8 trnR-ACG-trnN-GUU_p3 trnR-ACG-trnN-GUU 3 CAGAGGATTAGAGCACGTGG TGGGTTGAGAACGGGAATTG 20 20 55.0 50.0 57.8 58.1 18.9 0.0 0.311620 106953 107527 756-757 1.000000 79.6 trnR-ACG-trnN-GUU_p4 trnR-ACG-trnN-GUU 4 CAGAGGATTAGAGCACGTGG AGCTCGAATTTCCCGTTGTT 20 20 55.0 45.0 57.8 58.1 18.9 0.0 0.323698 106953 107527 727-728 1.000000 79.6 trnR-ACG-trnN-GUU_p5 trnR-ACG-trnN-GUU 5 TTTTAGGGTACTCCGGGGAA CCGTTGTTCCTCAGTAGCTC 20 20 50.0 55.0 57.7 58.0 9.3 0.0 0.343052 106953 107527 769-770 1.000000 79.3 ycf1_p1 ycf1 1 ATCTATACGCGCTCAAAGGC CGGGGATAACCAGAAAAGGG 20 20 50.0 55.0 58.2 57.9 5.7 0.0 0.268257 110089 110208 699-702 1.000000 83.2 ycf1_p2 ycf1 2 ACAACAAACGGATTTTCGGC CGGGGATAACCAGAAAAGGG 20 20 45.0 55.0 57.9 57.9 0.0 0.0 0.181150 110089 110208 735-738 0.800000 74.0 ycf1_p3 ycf1 3 ACAACAAACGGATTTTCGGC ATCTGTGCCAAGGTTTCAGG 20 20 45.0 50.0 57.9 58.1 0.0 0.0 0.213227 110089 110208 617-617 0.800000 73.1 ycf1_p4 ycf1 4 ACAACAAACGGATTTTCGGC AAGGCGATTTCGGGGATAAC 20 20 45.0 50.0 57.9 58.0 0.0 1.7 0.165195 110089 110208 745-748 0.600000 65.5 ycf1_p5 ycf1 5 ATCTATACGCGCTCAAAGGC AAGGCGATTTCGGGGATAAC 20 20 50.0 50.0 58.2 58.0 5.7 1.7 0.252303 110089 110208 709-712 0.600000 64.9 ycf1-rps15_p1 ycf1-rps15 1 ATTGAGCTGGAGAGGTTCCT TCCTTTCGGTGCAATTCCAA 20 20 50.0 45.0 58.0 58.0 0.0 0.0 0.047721 113336 113787 1328-1340 0.800000 77.0 ycf1-rps15_p2 ycf1-rps15 2 ATTGAGCTGGAGAGGTTCCT CGGATTTGTGACTCCCGAAT 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.060190 113336 113787 1460-1472 0.800000 76.6 ycf1-rps15_p3 ycf1-rps15 3 ATTGAGCTGGAGAGGTTCCT TAATCGTTGCCGTTTTCCCA 20 20 50.0 45.0 58.0 58.1 0.0 0.0 0.142470 113336 113787 1380-1392 0.800000 76.2 ycf1-rps15_p4 ycf1-rps15 4 ATTGAGCTGGAGAGGTTCCT AACACCATGCATTGATGGGT 20 20 50.0 45.0 58.0 58.1 0.0 8.9 0.094638 113336 113787 1653-1665 0.800000 76.0 ycf1-rps15_p5 ycf1-rps15 5 ATTGAGCTGGAGAGGTTCCT CCAACGTGTTACATAGGGCA 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.138085 113336 113787 1788-1800 0.800000 75.3 rpl32-ndhF_p1 rpl32-ndhF 1 TCCTAAGAGCAGCGTGTCTA GGAAAAAGTAGGAGCCCCAC 20 20 50.0 55.0 57.9 58.2 0.0 0.0 0.288783 123700 124181 1040-1075 1.000000 84.2 rpl32-ndhF_p2 rpl32-ndhF 2 TCCTAAGAGCAGCGTGTCTA GTGGGAAAAAGTAGGAGCCC 20 20 50.0 55.0 57.9 58.2 0.0 0.0 0.288783 123700 124181 1043-1078 1.000000 84.1 rpl32-ndhF_p3 rpl32-ndhF 3 CGAAGATCAAATGCCATGCC GGAAAAAGTAGGAGCCCCAC 20 20 50.0 55.0 57.9 58.2 0.0 0.0 0.294329 123700 124181 1097-1132 1.000000 83.9 rpl32-ndhF_p4 rpl32-ndhF 4 GAAGATCAAATGCCATGCCG GGAAAAAGTAGGAGCCCCAC 20 20 50.0 55.0 57.9 58.2 0.0 0.0 0.294329 123700 124181 1096-1131 1.000000 83.9 rpl32-ndhF_p5 rpl32-ndhF 5 GAAGATCAAATGCCATGCCG GTGGGAAAAAGTAGGAGCCC 20 20 50.0 55.0 57.9 58.2 0.0 0.0 0.294329 123700 124181 1099-1134 1.000000 83.9 trnN-GUU-trnR-ACG_p1 trnN-GUU-trnR-ACG 1 CCGTTGTTCCTCAGTAGCTC CAGAGGATTAGAGCACGTGG 20 20 55.0 55.0 58.0 57.8 0.0 18.9 0.218238 127420 127994 715-716 1.000000 80.5 trnN-GUU-trnR-ACG_p2 trnN-GUU-trnR-ACG 2 CCGTTGTTCCTCAGTAGCTC GAACAGATCCAGTGGAGACG 20 20 55.0 55.0 58.0 57.7 0.0 18.7 0.288158 127420 127994 752-753 1.000000 79.8 trnN-GUU-trnR-ACG_p3 trnN-GUU-trnR-ACG 3 TGGGTTGAGAACGGGAATTG CAGAGGATTAGAGCACGTGG 20 20 50.0 55.0 58.1 57.8 0.0 18.9 0.311620 127420 127994 756-757 1.000000 79.6 trnN-GUU-trnR-ACG_p4 trnN-GUU-trnR-ACG 4 AGCTCGAATTTCCCGTTGTT CAGAGGATTAGAGCACGTGG 20 20 45.0 55.0 58.1 57.8 0.0 18.9 0.323698 127420 127994 727-728 1.000000 79.6 trnN-GUU-trnR-ACG_p5 trnN-GUU-trnR-ACG 5 CCGTTGTTCCTCAGTAGCTC TTTTAGGGTACTCCGGGGAA 20 20 55.0 50.0 58.0 57.7 0.0 9.3 0.343052 127420 127994 769-770 1.000000 79.3