feature_id feature_type parent_gene label_name start end strand length_bp region pi variable_sites indel_sites conserved_left_bp conserved_right_bp primer_available species_resolution unique_haplotype_count species_specific_haplotype_ratio interspecific_divergence alignment_reliability markerseek_score trnH-GUG tRNA trnH-GUG trnH-GUG 1 73 -1 73 LSC 0.013699 1 0 251 3 no 1.000000 2 1.000000 NA 1.000000 45.600000 IGS_001 igs trnH-GUG|psbA trnH-GUG-psbA 74 446 0 373 LSC 0.045576 17 0 46 24 no 1.000000 2 1.000000 NA 1.000000 67.000000 psbA gene psbA psbA 447 1508 -1 1062 LSC 0.009416 10 0 20 300 no 1.000000 2 1.000000 NA 1.000000 50.700000 IGS_002 igs psbA|trnK-UUU psbA-trnK-UUU 1509 1731 0 223 LSC 0.000000 0 12 80 159 no 1.000000 2 1.000000 NA 0.946188 48.200000 trnK-UUU_part2 tRNA trnK-UUU trnK-UUU 1732 1767 -1 36 LSC 0.000000 0 0 300 123 no 0.000000 1 0.000000 NA 1.000000 28.000000 matK gene matK matK 2045 3571 -1 1527 LSC 0.009168 14 0 30 56 no 1.000000 2 1.000000 NA 1.000000 51.200000 IGS_005 igs matK|trnK-UUU matK-trnK-UUU 3572 4278 0 707 LSC 0.009972 7 5 111 11 no 1.000000 2 1.000000 NA 0.992928 51.000000 trnK-UUU_part1 tRNA trnK-UUU trnK-UUU 4279 4315 -1 37 LSC 0.027027 1 0 207 30 no 1.000000 2 1.000000 NA 1.000000 55.300000 IGS_006 igs trnK-UUU|trnQ-UUG trnK-UUU-trnQ-UUG 4316 5824 0 1509 LSC 0.026694 39 48 25 87 no 1.000000 2 1.000000 NA 0.968191 63.900000 trnQ-UUG tRNA trnQ-UUG trnQ-UUG 5825 5896 -1 72 LSC 0.000000 0 0 41 15 no 0.000000 1 0.000000 NA 1.000000 19.900000 IGS_007 igs trnQ-UUG|psbI trnQ-UUG-psbI 5897 6843 0 947 LSC 0.023707 22 19 113 84 no 1.000000 2 1.000000 NA 0.979937 65.600000 psbI gene psbI psbI 6844 6954 1 111 LSC 0.009009 1 0 92 287 no 1.000000 2 1.000000 NA 1.000000 49.600000 IGS_008 igs psbI|trnS-GCU psbI-trnS-GCU 6955 7051 0 97 LSC 0.000000 0 0 26 190 no 0.000000 1 0.000000 NA 1.000000 20.700000 trnS-GCU tRNA trnS-GCU trnS-GCU 7052 7139 -1 88 LSC 0.000000 0 0 123 102 no 0.000000 1 0.000000 NA 1.000000 26.400000 IGS_009 igs trnS-GCU|trnG-UCC trnS-GCU-trnG-UCC 7140 7694 0 555 LSC 0.025743 13 50 211 125 no 1.000000 2 1.000000 NA 0.909910 70.400000 trnG-UCC_part1 tRNA trnG-UCC trnG-UCC 7695 7717 1 23 LSC 0.000000 0 0 137 102 no 0.000000 1 0.000000 NA 1.000000 26.400000 trnG-UCC_part2 tRNA trnG-UCC trnG-UCC 8406 8453 1 48 LSC 0.000000 0 0 93 17 no 0.000000 1 0.000000 NA 1.000000 20.000000 IGS_012 igs trnG-UCC|trnR-UCU trnG-UCC-trnR-UCU 8454 8628 0 175 LSC 0.023392 4 4 141 177 no 1.000000 2 1.000000 NA 0.977143 63.700000 trnR-UCU tRNA trnR-UCU trnR-UCU 8629 8700 1 72 LSC 0.000000 0 0 2 105 no 0.000000 1 0.000000 NA 1.000000 18.900000 IGS_013 igs trnR-UCU|atpA trnR-UCU-atpA 8701 8847 0 147 LSC 0.013699 2 1 74 46 no 1.000000 2 1.000000 NA 0.993197 49.500000 atpA gene atpA atpA 8848 10371 -1 1524 LSC 0.007218 11 0 40 9 no 1.000000 2 1.000000 NA 1.000000 48.500000 IGS_014 igs atpA|atpF atpA-atpF 10372 10423 0 52 LSC 0.038462 2 0 110 5 no 1.000000 2 1.000000 NA 1.000000 60.000000 atpF gene atpF atpF 10424 11686 -1 1263 LSC 0.010342 13 6 33 26 no 1.000000 2 1.000000 NA 0.995249 52.100000 IGS_015 igs atpF|atpH atpF-atpH 11687 12065 0 379 LSC 0.027548 10 16 47 300 no 1.000000 2 1.000000 NA 0.957784 62.500000 atpH gene atpH atpH 12066 12311 -1 246 LSC 0.000000 0 0 114 175 no 0.000000 1 0.000000 NA 1.000000 27.300000 IGS_016 igs atpH|atpI atpH-atpI 12312 13197 0 886 LSC 0.011507 10 17 300 300 no 1.000000 2 1.000000 NA 0.980813 67.200000 atpI gene atpI atpI 13198 13938 -1 741 LSC 0.002699 2 0 97 136 no 1.000000 2 1.000000 NA 1.000000 52.600000 IGS_017 igs atpI|rps2 atpI-rps2 13939 14159 0 221 LSC 0.009050 2 0 25 116 no 1.000000 2 1.000000 NA 1.000000 44.600000 rps2 gene rps2 rps2 14160 14870 -1 711 LSC 0.008439 6 0 74 1 no 1.000000 2 1.000000 NA 1.000000 48.700000 IGS_018 igs rps2|rpoC2 rps2-rpoC2 14871 15143 0 273 LSC 0.025641 7 0 113 58 no 1.000000 2 1.000000 NA 1.000000 56.600000 rpoC2 gene rpoC2 rpoC2 15144 19199 -1 4056 LSC 0.008383 34 0 34 55 no 1.000000 2 1.000000 NA 1.000000 46.300000 IGS_019 igs rpoC2|rpoC1 rpoC2-rpoC1 19200 19354 0 155 LSC 0.025806 4 0 53 3 no 1.000000 2 1.000000 NA 1.000000 52.600000 rpoC1 gene rpoC1 rpoC1 19355 22147 -1 2793 LSC 0.007521 21 1 20 60 no 1.000000 2 1.000000 NA 0.999642 46.900000 IGS_020 igs rpoC1|rpoB rpoC1-rpoB 22148 22173 0 26 LSC 0.000000 0 0 282 34 no 0.000000 1 0.000000 NA 1.000000 21.300000 rpoB gene rpoB rpoB 22174 25386 -1 3213 LSC 0.007158 23 0 300 12 no 1.000000 2 1.000000 NA 1.000000 45.300000 IGS_021 igs rpoB|trnC-GCA rpoB-trnC-GCA 25387 26732 0 1346 LSC 0.016509 21 74 131 74 no 1.000000 2 1.000000 NA 0.945022 63.400000 trnC-GCA tRNA trnC-GCA trnC-GCA 26733 26803 1 71 LSC 0.000000 0 0 29 3 no 0.000000 1 0.000000 NA 1.000000 19.000000 IGS_022 igs trnC-GCA|petN trnC-GCA-petN 26804 27475 0 672 LSC 0.019374 13 1 100 75 no 1.000000 2 1.000000 NA 0.998512 60.700000 petN gene petN petN 27476 27565 1 90 LSC 0.011364 1 2 199 61 no 1.000000 2 1.000000 NA 0.977778 50.700000 IGS_023 igs petN|psbM petN-psbM 27566 28613 0 1048 LSC 0.021053 22 3 14 45 no 1.000000 2 1.000000 NA 0.997137 57.200000 psbM gene psbM psbM 28614 28718 -1 105 LSC 0.009524 1 0 59 54 no 1.000000 2 1.000000 NA 1.000000 47.000000 IGS_024 igs psbM|trnD-GUC psbM-trnD-GUC 28719 29536 0 818 LSC 0.030788 25 6 59 86 no 1.000000 2 1.000000 NA 0.992665 66.600000 trnD-GUC tRNA trnD-GUC trnD-GUC 29537 29610 -1 74 LSC 0.000000 0 0 46 12 no 0.000000 1 0.000000 NA 1.000000 19.700000 IGS_025 igs trnD-GUC|trnY-GUA trnD-GUC-trnY-GUA 29611 29720 0 110 LSC 0.018182 2 0 120 57 no 1.000000 2 1.000000 NA 1.000000 52.200000 trnY-GUA tRNA trnY-GUA trnY-GUA 29721 29804 -1 84 LSC 0.011905 1 0 87 59 no 1.000000 2 1.000000 NA 1.000000 48.800000 IGS_026 igs trnY-GUA|trnE-UUC trnY-GUA-trnE-UUC 29805 29868 0 64 LSC 0.015625 1 0 26 81 no 1.000000 2 1.000000 NA 1.000000 48.400000 trnE-UUC tRNA trnE-UUC trnE-UUC 29869 29941 -1 73 LSC 0.000000 0 0 4 8 no 0.000000 1 0.000000 NA 1.000000 19.100000 IGS_027 igs trnE-UUC|trnT-GGU trnE-UUC-trnT-GGU 29942 30701 0 760 LSC 0.028926 14 276 77 96 no 1.000000 2 1.000000 NA 0.636842 60.900000 trnT-GGU tRNA trnT-GGU trnT-GGU 30702 30773 1 72 LSC 0.000000 0 0 7 24 no 0.000000 1 0.000000 NA 1.000000 19.300000 IGS_028 igs trnT-GGU|psbD trnT-GGU-psbD 30774 32089 0 1316 LSC 0.021672 28 24 79 206 no 1.000000 2 1.000000 NA 0.981763 63.900000 psbD gene psbD psbD 32090 33151 1 1062 LSC 0.005650 6 0 56 93 no 1.000000 2 1.000000 NA 1.000000 51.200000 psbC gene psbC psbC 33099 34520 1 1422 LSC 0.005626 8 0 300 1 no 1.000000 2 1.000000 NA 1.000000 47.100000 IGS_030 igs psbC|trnS-UGA psbC-trnS-UGA 34521 34756 0 236 LSC 0.021459 5 3 195 139 no 1.000000 2 1.000000 NA 0.987288 61.500000 trnS-UGA tRNA trnS-UGA trnS-UGA 34757 34849 -1 93 LSC 0.000000 0 0 26 46 no 0.000000 1 0.000000 NA 1.000000 20.700000 IGS_031 igs trnS-UGA|psbZ trnS-UGA-psbZ 34850 35160 0 311 LSC 0.016077 5 0 119 300 no 1.000000 2 1.000000 NA 1.000000 55.900000 psbZ gene psbZ psbZ 35161 35349 1 189 LSC 0.000000 0 0 28 111 no 0.000000 1 0.000000 NA 1.000000 20.900000 IGS_032 igs psbZ|trnG-GCC psbZ-trnG-GCC 35350 35599 0 250 LSC 0.016000 4 0 217 154 no 1.000000 2 1.000000 NA 1.000000 58.200000 trnG-GCC tRNA trnG-GCC trnG-GCC 35600 35670 1 71 LSC 0.000000 0 0 80 83 no 0.000000 1 0.000000 NA 1.000000 24.800000 IGS_033 igs trnG-GCC|trnM-CAU trnG-GCC-trnM-CAU 35671 35820 0 150 LSC 0.013986 2 7 151 78 no 1.000000 2 1.000000 NA 0.953333 55.800000 trnM-CAU tRNA trnM-CAU trnM-CAU 35821 35894 -1 74 LSC 0.000000 0 0 23 4 no 0.000000 1 0.000000 NA 1.000000 19.100000 IGS_034 igs trnM-CAU|rps14 trnM-CAU-rps14 35895 36035 0 141 LSC 0.014184 2 0 97 58 no 1.000000 2 1.000000 NA 1.000000 50.000000 rps14 gene rps14 rps14 36036 36338 -1 303 LSC 0.009901 3 0 130 26 no 1.000000 2 1.000000 NA 1.000000 45.200000 IGS_035 igs rps14|psaB rps14-psaB 36339 36472 0 134 LSC 0.022388 3 0 116 189 no 1.000000 2 1.000000 NA 1.000000 59.100000 psaB gene psaB psaB 36473 38677 -1 2205 LSC 0.007256 16 0 11 300 no 1.000000 2 1.000000 NA 1.000000 47.300000 IGS_036 igs psaB|psaA psaB-psaA 38678 38702 0 25 LSC 0.000000 0 0 248 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 psaA gene psaA psaA 38703 40955 -1 2253 LSC 0.004439 10 0 273 60 no 1.000000 2 1.000000 NA 1.000000 49.200000 IGS_037 igs psaA|ycf3 psaA-ycf3 40956 41786 0 831 LSC 0.012180 10 10 29 6 no 1.000000 2 1.000000 NA 0.987966 52.400000 ycf3 gene ycf3 ycf3 41787 43839 -1 2053 LSC 0.008333 17 13 10 71 no 1.000000 2 1.000000 NA 0.993668 48.700000 IGS_038 igs ycf3|trnS-GGA ycf3-trnS-GGA 43840 44354 0 515 LSC 0.015842 8 10 196 157 no 1.000000 2 1.000000 NA 0.980583 64.700000 trnS-GGA tRNA trnS-GGA trnS-GGA 44355 44441 1 87 LSC 0.000000 0 0 39 70 no 0.000000 1 0.000000 NA 1.000000 21.700000 IGS_039 igs trnS-GGA|rps4 trnS-GGA-rps4 44442 44758 0 317 LSC 0.019048 6 2 126 210 no 1.000000 2 1.000000 NA 0.993691 58.900000 rps4 gene rps4 rps4 44759 45364 -1 606 LSC 0.001650 1 0 43 188 no 1.000000 2 1.000000 NA 1.000000 47.900000 IGS_040 igs rps4|trnT-UGU rps4-trnT-UGU 45365 45596 0 232 LSC 0.008621 2 0 300 153 no 1.000000 2 1.000000 NA 1.000000 53.900000 trnT-UGU tRNA trnT-UGU trnT-UGU 45597 45669 -1 73 LSC 0.000000 0 0 23 80 no 0.000000 1 0.000000 NA 1.000000 20.500000 IGS_041 igs trnT-UGU|trnL-UAA trnT-UGU-trnL-UAA 45670 46352 0 683 LSC 0.021053 14 18 96 218 no 1.000000 2 1.000000 NA 0.973646 65.500000 trnL-UAA_part1 tRNA trnL-UAA trnL-UAA 46353 46387 1 35 LSC 0.000000 0 0 10 183 no 0.000000 1 0.000000 NA 1.000000 19.500000 trnL-UAA_part2 tRNA trnL-UAA trnL-UAA 46763 46812 1 50 LSC 0.000000 0 0 2 37 no 0.000000 1 0.000000 NA 1.000000 18.900000 IGS_044 igs trnL-UAA|trnF-GAA trnL-UAA-trnF-GAA 46813 47172 0 360 LSC 0.014620 5 18 52 108 no 1.000000 2 1.000000 NA 0.950000 55.800000 trnF-GAA tRNA trnF-GAA trnF-GAA 47173 47245 1 73 LSC 0.000000 0 0 78 35 no 0.000000 1 0.000000 NA 1.000000 21.400000 IGS_045 igs trnF-GAA|ndhJ trnF-GAA-ndhJ 47246 47872 0 627 LSC 0.016393 10 17 151 288 no 1.000000 2 1.000000 NA 0.972887 67.100000 ndhJ gene ndhJ ndhJ 47873 48349 -1 477 LSC 0.002096 1 0 17 127 no 1.000000 2 1.000000 NA 1.000000 43.700000 IGS_046 igs ndhJ|ndhK ndhJ-ndhK 48350 48484 0 135 LSC 0.007407 1 0 188 203 no 1.000000 2 1.000000 NA 1.000000 55.900000 ndhK gene ndhK ndhK 48485 49159 -1 675 LSC 0.001481 1 0 7 4 no 1.000000 2 1.000000 NA 1.000000 44.900000 IGS_047 igs ndhK|ndhC ndhK-ndhC 49160 49207 0 48 LSC 0.020833 1 0 300 279 no 1.000000 2 1.000000 NA 1.000000 64.500000 ndhC gene ndhC ndhC 49208 49570 -1 363 LSC 0.002755 1 0 43 204 no 1.000000 2 1.000000 NA 1.000000 43.600000 IGS_048 igs ndhC|trnV-UAC ndhC-trnV-UAC 49571 50173 0 603 LSC 0.030303 18 9 83 170 no 1.000000 2 1.000000 NA 0.985075 68.800000 trnV-UAC_part2 tRNA trnV-UAC trnV-UAC 50174 50233 -1 60 LSC 0.000000 0 0 24 110 no 0.000000 1 0.000000 NA 1.000000 20.600000 trnV-UAC_part1 tRNA trnV-UAC trnV-UAC 50833 50862 -1 30 LSC 0.000000 0 0 57 1 no 0.000000 1 0.000000 NA 1.000000 18.800000 IGS_051 igs trnV-UAC|trnM-CAU trnV-UAC-trnM-CAU 50863 51054 0 192 LSC 0.021739 4 8 87 288 no 1.000000 2 1.000000 NA 0.958333 60.400000 trnM-CAU tRNA trnM-CAU trnM-CAU 51055 51127 1 73 LSC 0.000000 0 0 37 215 no 0.000000 1 0.000000 NA 1.000000 21.500000 IGS_052 igs trnM-CAU|atpE trnM-CAU-atpE 51128 51377 0 250 LSC 0.004202 1 12 110 221 no 1.000000 2 1.000000 NA 0.952000 52.800000 atpE gene atpE atpE 51378 51776 -1 399 LSC 0.002506 1 0 34 52 no 1.000000 2 1.000000 NA 1.000000 43.600000 atpB gene atpB atpB 51773 53275 -1 1503 LSC 0.001996 3 0 173 19 no 1.000000 2 1.000000 NA 1.000000 46.300000 IGS_054 igs atpB|accD atpB-accD 53276 56140 0 2865 LSC 0.013786 39 36 300 20 no 1.000000 2 1.000000 NA 0.987435 51.500000 accD gene accD accD 56141 57625 1 1485 LSC 0.009498 14 11 8 94 no 1.000000 2 1.000000 NA 0.992593 50.500000 IGS_055 igs accD|psaI accD-psaI 57626 58163 0 538 LSC 0.016598 8 56 34 48 no 1.000000 2 1.000000 NA 0.895911 57.700000 psaI gene psaI psaI 58164 58274 1 111 LSC 0.018018 2 0 167 12 no 1.000000 2 1.000000 NA 1.000000 48.800000 IGS_056 igs psaI|ycf4 psaI-ycf4 58275 58704 0 430 LSC 0.013953 6 0 37 67 no 1.000000 2 1.000000 NA 1.000000 51.000000 ycf4 gene ycf4 ycf4 58705 59259 1 555 LSC 0.014414 8 0 4 8 no 1.000000 2 1.000000 NA 1.000000 51.400000 IGS_057 igs ycf4|cemA ycf4-cemA 59260 59753 0 494 LSC 0.010684 5 26 54 300 no 1.000000 2 1.000000 NA 0.947368 56.400000 cemA gene cemA cemA 59754 60443 1 690 LSC 0.007246 5 0 12 34 no 1.000000 2 1.000000 NA 1.000000 48.800000 IGS_058 igs cemA|petA cemA-petA 60444 60699 0 256 LSC 0.019608 5 1 36 35 no 1.000000 2 1.000000 NA 0.996094 51.800000 petA gene petA petA 60700 61659 1 960 LSC 0.005208 5 0 25 13 no 1.000000 2 1.000000 NA 1.000000 47.700000 IGS_059 igs petA|psbJ petA-psbJ 61660 62522 0 863 LSC 0.045667 39 9 231 119 yes 1.000000 2 1.000000 NA 0.989571 79.900000 psbJ gene psbJ psbJ 62523 62645 -1 123 LSC 0.008130 1 0 49 300 no 1.000000 2 1.000000 NA 1.000000 45.800000 IGS_060 igs psbJ|psbL psbJ-psbL 62646 62782 0 137 LSC 0.000000 0 0 3 227 no 0.000000 1 0.000000 NA 1.000000 19.000000 psbL gene psbL psbL 62783 62899 -1 117 LSC 0.000000 0 0 140 110 no 0.000000 1 0.000000 NA 1.000000 27.000000 IGS_061 igs psbL|psbF psbL-psbF 62900 62922 0 23 LSC 0.000000 0 0 257 87 no 0.000000 1 0.000000 NA 1.000000 25.300000 psbF gene psbF psbF 62923 63042 -1 120 LSC 0.008333 1 0 280 45 no 1.000000 2 1.000000 NA 1.000000 45.700000 IGS_062 igs psbF|psbE psbF-psbE 63043 63051 0 9 LSC 0.000000 0 0 32 36 no 0.000000 1 0.000000 NA 1.000000 21.100000 psbE gene psbE psbE 63052 63303 -1 252 LSC 0.007937 2 0 41 212 no 1.000000 2 1.000000 NA 1.000000 45.100000 IGS_063 igs psbE|petG psbE-petG 63304 64599 0 1296 LSC 0.012355 16 1 175 202 no 1.000000 2 1.000000 NA 0.999228 64.100000 petG gene petG petG 64600 64713 1 114 LSC 0.000000 0 0 29 88 no 0.000000 1 0.000000 NA 1.000000 20.900000 IGS_064 igs petG|trnW-CCA petG-trnW-CCA 64714 64852 0 139 LSC 0.007299 1 2 143 80 no 1.000000 2 1.000000 NA 0.985612 49.100000 trnW-CCA tRNA trnW-CCA trnW-CCA 64853 64926 -1 74 LSC 0.000000 0 0 50 6 no 0.000000 1 0.000000 NA 1.000000 19.200000 IGS_065 igs trnW-CCA|trnP-UGG trnW-CCA-trnP-UGG 64927 65068 0 142 LSC 0.021127 3 0 124 152 no 1.000000 2 1.000000 NA 1.000000 58.900000 trnP-UGG tRNA trnP-UGG trnP-UGG 65069 65142 -1 74 LSC 0.000000 0 0 41 78 no 0.000000 1 0.000000 NA 1.000000 21.800000 IGS_066 igs trnP-UGG|psaJ trnP-UGG-psaJ 65143 65534 0 392 LSC 0.012788 5 1 115 48 no 1.000000 2 1.000000 NA 0.997449 50.600000 psaJ gene psaJ psaJ 65535 65669 1 135 LSC 0.014815 2 0 138 17 no 1.000000 2 1.000000 NA 1.000000 47.300000 IGS_067 igs psaJ|rps18 psaJ-rps18 65670 66340 0 671 LSC 0.022693 15 10 66 49 no 1.000000 2 1.000000 NA 0.985097 61.900000 rps18 gene rps18 rps18 66341 66658 1 318 LSC 0.009434 3 0 18 126 no 1.000000 2 1.000000 NA 1.000000 44.600000 IGS_068 igs rps18|rpl20 rps18-rpl20 66659 66877 0 219 LSC 0.009434 2 7 4 285 no 1.000000 2 1.000000 NA 0.968037 46.300000 rpl20 gene rpl20 rpl20 66878 67240 -1 363 LSC 0.002755 1 0 55 74 no 1.000000 2 1.000000 NA 1.000000 44.500000 IGS_069 igs rpl20|rps12 rpl20-rps12 67241 68044 0 804 LSC 0.006250 5 4 77 173 no 1.000000 2 1.000000 NA 0.995025 53.600000 rps12_part1 gene rps12 rps12 68045 68158 -1 114 LSC 0.000000 0 0 30 59 no 0.000000 1 0.000000 NA 1.000000 21.000000 IGS_070 igs rps12|clpP rps12-clpP 68159 68324 0 166 LSC 0.018072 3 0 144 24 no 1.000000 2 1.000000 NA 1.000000 49.700000 clpP gene clpP clpP 68325 70339 -1 2015 LSC 0.010000 20 15 60 65 no 1.000000 2 1.000000 NA 0.992556 53.600000 IGS_071 igs clpP|psbB clpP-psbB 70340 70837 0 498 LSC 0.014056 7 0 139 300 no 1.000000 2 1.000000 NA 1.000000 60.100000 psbB gene psbB psbB 70838 72364 1 1527 LSC 0.001965 3 0 68 5 no 1.000000 2 1.000000 NA 1.000000 45.200000 IGS_072 igs psbB|psbT psbB-psbT 72365 72555 0 191 LSC 0.020942 4 0 300 23 no 1.000000 2 1.000000 NA 1.000000 51.300000 psbT gene psbT psbT 72556 72663 1 108 LSC 0.009259 1 0 52 209 no 1.000000 2 1.000000 NA 1.000000 46.700000 IGS_073 igs psbT|psbN psbT-psbN 72664 72723 0 60 LSC 0.000000 0 0 84 149 no 0.000000 1 0.000000 NA 1.000000 25.100000 psbN gene psbN psbN 72724 72855 -1 132 LSC 0.000000 0 0 144 17 no 0.000000 1 0.000000 NA 1.000000 20.000000 IGS_074 igs psbN|psbH psbN-psbH 72856 72977 0 122 LSC 0.024590 3 0 276 238 no 1.000000 2 1.000000 NA 1.000000 66.600000 psbH gene psbH psbH 72978 73190 1 213 LSC 0.000000 0 0 75 25 no 0.000000 1 0.000000 NA 1.000000 20.600000 IGS_075 igs psbH|petB psbH-petB 73191 73309 0 119 LSC 0.025210 3 0 288 220 no 1.000000 2 1.000000 NA 1.000000 67.000000 petB gene petB petB 73310 74672 1 1363 LSC 0.004425 6 7 70 68 no 1.000000 2 1.000000 NA 0.994864 51.900000 IGS_076 igs petB|petD petB-petD 74673 75534 0 862 LSC 0.010526 9 7 18 11 no 1.000000 2 1.000000 NA 0.991879 51.400000 petD gene petD petD 75535 76059 1 525 LSC 0.009524 5 0 89 163 no 1.000000 2 1.000000 NA 1.000000 54.300000 IGS_077 igs petD|rpoA petD-rpoA 76060 76247 0 188 LSC 0.005435 1 4 68 58 no 1.000000 2 1.000000 NA 0.978723 47.000000 rpoA gene rpoA rpoA 76248 77243 -1 996 LSC 0.010040 10 0 24 29 no 1.000000 2 1.000000 NA 1.000000 51.300000 IGS_078 igs rpoA|rps11 rpoA-rps11 77244 77312 0 69 LSC 0.028986 2 0 300 165 no 1.000000 2 1.000000 NA 1.000000 66.500000 rps11 gene rps11 rps11 77313 77729 -1 417 LSC 0.002398 1 0 2 30 no 1.000000 2 1.000000 NA 1.000000 41.500000 IGS_079 igs rps11|infA rps11-infA 77730 78119 0 390 LSC 0.012887 5 2 251 41 no 1.000000 2 1.000000 NA 0.994872 50.300000 infA gene infA infA 78120 78293 -1 174 LSC 0.017544 3 3 46 300 no 1.000000 2 1.000000 NA 0.982759 52.700000 IGS_080 igs infA|rps8 infA-rps8 78294 78417 0 124 LSC 0.000000 0 0 18 270 no 0.000000 1 0.000000 NA 1.000000 20.100000 rps8 gene rps8 rps8 78418 78822 -1 405 LSC 0.004938 2 0 142 22 no 1.000000 2 1.000000 NA 1.000000 44.200000 IGS_081 igs rps8|rpl14 rps8-rpl14 78823 78967 0 145 LSC 0.027972 4 2 78 21 no 1.000000 2 1.000000 NA 0.986207 56.400000 rpl14 gene rpl14 rpl14 78968 79336 -1 369 LSC 0.010840 4 0 12 70 no 1.000000 2 1.000000 NA 1.000000 46.100000 IGS_082 igs rpl14|rpl16 rpl14-rpl16 79337 79475 0 139 LSC 0.052239 7 5 134 9 no 1.000000 2 1.000000 NA 0.964029 70.500000 rpl16 gene rpl16 rpl16 79476 79637 -1 162 LSC 0.006173 1 0 49 72 no 1.000000 2 1.000000 NA 1.000000 44.700000 IGS_083 igs rpl16|rps3 rpl16-rps3 79638 80723 0 1086 LSC 0.015668 17 1 152 90 no 1.000000 2 1.000000 NA 0.999079 59.600000 rps3 gene rps3 rps3 80724 81383 -1 660 LSC 0.016667 11 0 22 30 no 1.000000 2 1.000000 NA 1.000000 55.000000 rpl22 gene rpl22 rpl22 81368 81799 -1 432 LSC 0.011990 5 15 16 50 no 1.000000 2 1.000000 NA 0.965278 51.700000 IGS_085 igs rpl22|rpl2 rpl22-rpl2 81800 82262 0 463 IRb 0.007979 3 87 145 300 no 1.000000 2 1.000000 NA 0.812095 57.100000 rpl2 gene rpl2 rpl2 82263 83747 -1 1485 IRb 0.002020 3 0 10 288 no 1.000000 2 1.000000 NA 1.000000 45.700000 IGS_086 igs rpl2|rpl23 rpl2-rpl23 83748 83765 0 18 IRb 0.000000 0 0 53 270 no 0.000000 1 0.000000 NA 1.000000 22.700000 rpl23 gene rpl23 rpl23 83766 84047 -1 282 IRb 0.003546 1 0 71 160 no 1.000000 2 1.000000 NA 1.000000 44.900000 IGS_087 igs rpl23|trnI-CAU rpl23-trnI-CAU 84048 84212 0 165 IRb 0.006061 1 0 11 300 no 1.000000 2 1.000000 NA 1.000000 41.800000 trnI-CAU tRNA trnI-CAU trnI-CAU 84213 84286 -1 74 IRb 0.000000 0 0 4 300 no 0.000000 1 0.000000 NA 1.000000 19.100000 IGS_088 igs trnI-CAU|ycf2 trnI-CAU-ycf2 84287 84374 0 88 IRb 0.000000 0 0 78 300 no 0.000000 1 0.000000 NA 1.000000 24.600000 ycf2 gene ycf2 ycf2 84375 91205 1 6831 IRb 0.003223 22 6 166 300 no 1.000000 2 1.000000 NA 0.999122 51.900000 IGS_089 igs ycf2|ycf15 ycf2-ycf15 91206 91335 0 130 IRb 0.000000 0 0 124 300 no 0.000000 1 0.000000 NA 1.000000 28.000000 ycf15 gene ycf15 ycf15 91336 91488 1 153 IRb 0.000000 0 0 254 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_090 igs ycf15|trnL-CAA ycf15-trnL-CAA 91489 91894 0 406 IRb 0.005000 2 6 300 300 no 1.000000 2 1.000000 NA 0.985222 59.000000 trnL-CAA tRNA trnL-CAA trnL-CAA 91895 91975 -1 81 IRb 0.000000 0 0 13 300 no 0.000000 1 0.000000 NA 1.000000 19.700000 IGS_091 igs trnL-CAA|ndhB trnL-CAA-ndhB 91976 92537 0 562 IRb 0.001779 1 0 94 156 no 1.000000 2 1.000000 NA 1.000000 51.000000 ndhB gene ndhB ndhB 92538 94745 -1 2208 IRb 0.001359 3 0 21 203 no 1.000000 2 1.000000 NA 1.000000 44.600000 IGS_092 igs ndhB|rps7 ndhB-rps7 94746 95022 0 277 IRb 0.003623 1 1 300 300 no 1.000000 2 1.000000 NA 0.996390 54.900000 rps7 gene rps7 rps7 95023 95490 -1 468 IRb 0.000000 0 0 73 37 no 0.000000 1 0.000000 NA 1.000000 25.000000 IGS_093 igs rps7|rps12 rps7-rps12 95491 95543 0 53 IRb 0.037736 2 0 300 163 no 1.000000 2 1.000000 NA 1.000000 71.400000 rps12_part2 gene rps12 rps12 95544 96338 -1 795 IRb 0.001258 1 0 2 300 no 1.000000 2 1.000000 NA 1.000000 44.600000 IGS_094 igs rps12|trnV-GAC rps12-trnV-GAC 96339 97825 0 1487 IRb 0.001362 2 19 300 83 no 1.000000 2 1.000000 NA 0.987223 52.000000 trnV-GAC tRNA trnV-GAC trnV-GAC 97826 97897 1 72 IRb 0.000000 0 0 300 11 no 0.000000 1 0.000000 NA 1.000000 19.600000 IGS_095 igs trnV-GAC|rrn16S trnV-GAC-rrn16S 97898 98136 0 239 IRb 0.012552 3 0 300 300 no 1.000000 2 1.000000 NA 1.000000 59.700000 rrn16S rRNA rrn16S rrn16S 98137 99628 1 1492 IRb 0.000000 0 0 33 284 no 0.000000 1 0.000000 NA 1.000000 27.500000 IGS_096 igs rrn16S|trnI-GAU rrn16S-trnI-GAU 99629 99927 0 299 IRb 0.003344 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 54.400000 trnI-GAU_part1 tRNA trnI-GAU trnI-GAU 99928 99959 1 32 IRb 0.000000 0 0 14 300 no 0.000000 1 0.000000 NA 1.000000 19.800000 trnI-GAU_part2 tRNA trnI-GAU trnI-GAU 100907 100946 1 40 IRb 0.000000 0 0 30 274 no 0.000000 1 0.000000 NA 1.000000 21.000000 IGS_099 igs trnI-GAU|trnA-UGC trnI-GAU-trnA-UGC 100947 101009 0 63 IRb 0.000000 0 0 70 211 no 0.000000 1 0.000000 NA 1.000000 24.000000 trnA-UGC_part1 tRNA trnA-UGC trnA-UGC 101010 101046 1 37 IRb 0.000000 0 0 133 174 no 0.000000 1 0.000000 NA 1.000000 28.700000 trnA-UGC_part2 tRNA trnA-UGC trnA-UGC 101873 101908 1 36 IRb 0.000000 0 0 216 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_102 igs trnA-UGC|rrn23S trnA-UGC-rrn23S 101909 102076 0 168 IRb 0.000000 0 0 252 223 no 0.000000 1 0.000000 NA 1.000000 33.800000 rrn23S rRNA rrn23S rrn23S 102077 104894 1 2818 IRb 0.000710 2 0 300 300 no 1.000000 2 1.000000 NA 1.000000 56.400000 IGS_103 igs rrn23S|rrn4.5S rrn23S-rrn4.5S 104895 104992 0 98 IRb 0.000000 0 0 300 277 no 0.000000 1 0.000000 NA 1.000000 33.800000 rrn4.5S rRNA rrn4.5S rrn4.5S 104993 105095 1 103 IRb 0.000000 0 0 300 174 no 0.000000 1 0.000000 NA 1.000000 31.800000 IGS_104 igs rrn4.5S|rrn5S rrn4.5S-rrn5S 105096 105314 0 219 IRb 0.004566 1 0 300 134 no 1.000000 2 1.000000 NA 1.000000 50.200000 rrn5S rRNA rrn5S rrn5S 105315 105435 1 121 IRb 0.000000 0 0 44 13 no 0.000000 1 0.000000 NA 1.000000 19.700000 IGS_105 igs rrn5S|trnR-ACG rrn5S-trnR-ACG 105436 105700 0 265 IRb 0.003774 1 0 165 243 no 1.000000 2 1.000000 NA 1.000000 52.000000 trnR-ACG tRNA trnR-ACG trnR-ACG 105701 105774 1 74 IRb 0.000000 0 0 251 169 no 0.000000 1 0.000000 NA 1.000000 31.400000 IGS_106 igs trnR-ACG|trnN-GUU trnR-ACG-trnN-GUU 105775 106340 0 566 IRb 0.003571 2 6 300 300 no 1.000000 2 1.000000 NA 0.989399 61.100000 trnN-GUU tRNA trnN-GUU trnN-GUU 106341 106412 -1 72 IRb 0.000000 0 0 170 292 no 0.000000 1 0.000000 NA 1.000000 31.500000 IGS_107 igs trnN-GUU|ycf1 trnN-GUU-ycf1 106413 106764 0 352 IRb 0.002907 1 8 242 300 no 1.000000 2 1.000000 NA 0.977273 57.400000 ycf1 gene ycf1 ycf1 106765 112242 1 5478 SSC 0.358365 1718 684 59 0 yes 1.000000 2 1.000000 NA 0.875137 75.200000 IGS_108 igs ycf1|rps15 ycf1-rps15 112243 112618 0 376 SSC 0.440741 119 106 0 0 no 1.000000 2 1.000000 NA 0.718085 72.400000 rps15 gene rps15 rps15 112619 112882 1 264 SSC 0.440415 85 71 4 8 no 1.000000 2 1.000000 NA 0.731061 71.500000 IGS_109 igs rps15|ndhH rps15-ndhH 112883 113012 0 130 SSC 0.398374 49 7 3 0 yes 1.000000 2 1.000000 NA 0.946154 77.200000 ndhH gene ndhH ndhH 113013 114194 1 1182 SSC 0.478217 472 195 2 0 yes 1.000000 2 1.000000 NA 0.835025 80.400000 IGS_110 igs ndhH|ndhA ndhH-ndhA 114195 114195 0 1 SSC 1.000000 1 0 0 0 no 1.000000 2 1.000000 NA 1.000000 72.500000 ndhA gene ndhA ndhA 114196 116460 1 2265 SSC 0.462687 744 657 0 12 no 1.000000 2 1.000000 NA 0.709934 75.200000 IGS_111 igs ndhA|ndhI ndhA-ndhI 116461 116536 0 76 SSC 0.485294 33 8 37 0 yes 1.000000 2 1.000000 NA 0.894737 75.800000 ndhI gene ndhI ndhI 116537 117040 1 504 SSC 0.443069 179 100 0 2 yes 1.000000 2 1.000000 NA 0.801587 77.400000 IGS_112 igs ndhI|ndhG ndhI-ndhG 117041 117435 0 395 SSC 0.397661 136 53 2 1 yes 1.000000 2 1.000000 NA 0.865823 77.000000 ndhG gene ndhG ndhG 117436 117966 1 531 SSC 0.492170 220 84 0 4 yes 1.000000 2 1.000000 NA 0.841808 79.100000 IGS_113 igs ndhG|ndhE ndhG-ndhE 117967 118087 0 121 SSC 0.457944 49 14 0 4 yes 1.000000 2 1.000000 NA 0.884298 75.500000 ndhE gene ndhE ndhE 118088 118390 1 303 SSC 0.470370 127 33 0 5 yes 1.000000 2 1.000000 NA 0.891089 75.700000 IGS_114 igs ndhE|psaC ndhE-psaC 118391 118715 0 325 SSC 0.400641 125 13 0 0 yes 1.000000 2 1.000000 NA 0.960000 76.900000 psaC gene psaC psaC 118716 118961 1 246 SSC 0.495833 119 6 1 7 no 1.000000 2 1.000000 NA 0.975610 74.900000 IGS_115 igs psaC|ndhD psaC-ndhD 118962 119431 0 470 SSC 0.493857 201 63 2 1 yes 1.000000 2 1.000000 NA 0.865957 78.600000 ndhD gene ndhD ndhD 119432 120595 1 1164 SSC 0.476331 483 150 0 0 yes 1.000000 2 1.000000 NA 0.871134 81.400000 IGS_116 igs ndhD|ccsA ndhD-ccsA 120596 120811 0 216 SSC 0.424779 48 103 1 4 no 1.000000 2 1.000000 NA 0.523148 66.600000 ccsA gene ccsA ccsA 120812 121804 -1 993 SSC 0.468427 408 122 3 7 yes 1.000000 2 1.000000 NA 0.877140 81.800000 IGS_117 igs ccsA|trnL-UAG ccsA-trnL-UAG 121805 121890 0 86 SSC 0.530303 35 20 1 1 no 1.000000 2 1.000000 NA 0.767442 72.300000 trnL-UAG tRNA trnL-UAG trnL-UAG 121891 121970 -1 80 SSC 0.512500 41 0 1 2 no 1.000000 2 1.000000 NA 1.000000 72.600000 IGS_118 igs trnL-UAG|ndhF trnL-UAG-ndhF 121971 123855 0 1885 SSC 0.460081 680 407 0 1 yes 1.000000 2 1.000000 NA 0.784085 78.100000 ndhF gene ndhF ndhF 123856 126093 1 2238 SSC 0.467669 933 243 1 20 yes 1.000000 2 1.000000 NA 0.891421 80.500000 IGS_119 igs ndhF|trnN-GUU ndhF-trnN-GUU 126094 127384 0 1291 IRa 0.002338 3 8 54 242 no 1.000000 2 1.000000 NA 0.993803 49.700000 trnN-GUU tRNA trnN-GUU trnN-GUU 127385 127456 1 72 IRa 0.000000 0 0 292 170 no 0.000000 1 0.000000 NA 1.000000 31.500000 IGS_120 igs trnN-GUU|trnR-ACG trnN-GUU-trnR-ACG 127457 128022 0 566 IRa 0.003571 2 6 300 300 no 1.000000 2 1.000000 NA 0.989399 61.100000 trnR-ACG tRNA trnR-ACG trnR-ACG 128023 128096 -1 74 IRa 0.000000 0 0 169 251 no 0.000000 1 0.000000 NA 1.000000 31.400000 IGS_121 igs trnR-ACG|rrn5S trnR-ACG-rrn5S 128097 128361 0 265 IRa 0.003774 1 0 243 165 no 1.000000 2 1.000000 NA 1.000000 52.000000 rrn5S rRNA rrn5S rrn5S 128362 128482 -1 121 IRa 0.000000 0 0 13 44 no 0.000000 1 0.000000 NA 1.000000 19.700000 IGS_122 igs rrn5S|rrn4.5S rrn5S-rrn4.5S 128483 128701 0 219 IRa 0.004566 1 0 134 300 no 1.000000 2 1.000000 NA 1.000000 50.200000 rrn4.5S rRNA rrn4.5S rrn4.5S 128702 128804 -1 103 IRa 0.000000 0 0 174 300 no 0.000000 1 0.000000 NA 1.000000 31.800000 IGS_123 igs rrn4.5S|rrn23S rrn4.5S-rrn23S 128805 128902 0 98 IRa 0.000000 0 0 277 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rrn23S rRNA rrn23S rrn23S 128903 131720 -1 2818 IRa 0.000710 2 0 300 300 no 1.000000 2 1.000000 NA 1.000000 56.400000 IGS_124 igs rrn23S|trnA-UGC rrn23S-trnA-UGC 131721 131888 0 168 IRa 0.000000 0 0 223 252 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnA-UGC_part2 tRNA trnA-UGC trnA-UGC 131889 131924 -1 36 IRa 0.000000 0 0 300 216 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnA-UGC_part1 tRNA trnA-UGC trnA-UGC 132751 132787 -1 37 IRa 0.000000 0 0 174 133 no 0.000000 1 0.000000 NA 1.000000 28.700000 IGS_127 igs trnA-UGC|trnI-GAU trnA-UGC-trnI-GAU 132788 132850 0 63 IRa 0.000000 0 0 211 70 no 0.000000 1 0.000000 NA 1.000000 24.000000 trnI-GAU_part2 tRNA trnI-GAU trnI-GAU 132851 132890 -1 40 IRa 0.000000 0 0 274 30 no 0.000000 1 0.000000 NA 1.000000 21.000000 trnI-GAU_part1 tRNA trnI-GAU trnI-GAU 133838 133869 -1 32 IRa 0.000000 0 0 300 14 no 0.000000 1 0.000000 NA 1.000000 19.800000 IGS_130 igs trnI-GAU|rrn16S trnI-GAU-rrn16S 133870 134168 0 299 IRa 0.003344 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 54.400000 rrn16S rRNA rrn16S rrn16S 134169 135660 -1 1492 IRa 0.000000 0 0 284 33 no 0.000000 1 0.000000 NA 1.000000 27.500000 IGS_131 igs rrn16S|trnV-GAC rrn16S-trnV-GAC 135661 135899 0 239 IRa 0.012552 3 0 300 300 no 1.000000 2 1.000000 NA 1.000000 59.700000 trnV-GAC tRNA trnV-GAC trnV-GAC 135900 135971 -1 72 IRa 0.000000 0 0 11 300 no 0.000000 1 0.000000 NA 1.000000 19.600000 IGS_132 igs trnV-GAC|rps12 trnV-GAC-rps12 135972 137458 0 1487 IRa 0.001362 2 19 83 300 no 1.000000 2 1.000000 NA 0.987223 52.000000 rps12_part2 gene rps12 rps12 137459 138253 1 795 IRa 0.001258 1 0 300 2 no 1.000000 2 1.000000 NA 1.000000 44.600000 IGS_133 igs rps12|rps7 rps12-rps7 138254 138306 0 53 IRa 0.037736 2 0 163 300 no 1.000000 2 1.000000 NA 1.000000 71.400000 rps7 gene rps7 rps7 138307 138774 1 468 IRa 0.000000 0 0 37 73 no 0.000000 1 0.000000 NA 1.000000 25.000000 IGS_134 igs rps7|ndhB rps7-ndhB 138775 139051 0 277 IRa 0.003623 1 1 300 300 no 1.000000 2 1.000000 NA 0.996390 54.900000 ndhB gene ndhB ndhB 139052 141259 1 2208 IRa 0.001359 3 0 203 21 no 1.000000 2 1.000000 NA 1.000000 44.600000 IGS_135 igs ndhB|trnL-CAA ndhB-trnL-CAA 141260 141821 0 562 IRa 0.001779 1 0 156 94 no 1.000000 2 1.000000 NA 1.000000 51.000000 trnL-CAA tRNA trnL-CAA trnL-CAA 141822 141902 1 81 IRa 0.000000 0 0 300 13 no 0.000000 1 0.000000 NA 1.000000 19.700000 IGS_136 igs trnL-CAA|ycf15 trnL-CAA-ycf15 141903 142308 0 406 IRa 0.005000 2 6 300 300 no 1.000000 2 1.000000 NA 0.985222 59.000000 ycf15 gene ycf15 ycf15 142309 142461 -1 153 IRa 0.000000 0 0 300 254 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_137 igs ycf15|ycf2 ycf15-ycf2 142462 142591 0 130 IRa 0.000000 0 0 300 124 no 0.000000 1 0.000000 NA 1.000000 28.000000 ycf2 gene ycf2 ycf2 142592 149422 -1 6831 IRa 0.003223 22 6 300 166 no 1.000000 2 1.000000 NA 0.999122 51.900000 IGS_138 igs ycf2|trnI-CAU ycf2-trnI-CAU 149423 149510 0 88 IRa 0.000000 0 0 300 78 no 0.000000 1 0.000000 NA 1.000000 24.600000 trnI-CAU tRNA trnI-CAU trnI-CAU 149511 149584 1 74 IRa 0.000000 0 0 300 4 no 0.000000 1 0.000000 NA 1.000000 19.100000 IGS_139 igs trnI-CAU|rpl23 trnI-CAU-rpl23 149585 149749 0 165 IRa 0.006061 1 0 300 11 no 1.000000 2 1.000000 NA 1.000000 41.800000 rpl23 gene rpl23 rpl23 149750 150031 1 282 IRa 0.003546 1 0 160 71 no 1.000000 2 1.000000 NA 1.000000 44.900000 IGS_140 igs rpl23|rpl2 rpl23-rpl2 150032 150049 0 18 IRa 0.000000 0 0 270 53 no 0.000000 1 0.000000 NA 1.000000 22.700000 rpl2 gene rpl2 rpl2 150050 151534 1 1485 IRa 0.002020 3 0 288 10 no 1.000000 2 1.000000 NA 1.000000 45.700000 IGS_141 igs rpl2|trnH-GUG rpl2-trnH-GUG 151535 151796 0 262 IRa 0.003831 8053 4247 300 26 no 1.000000 2 1.000000 NA 0.972070 59.100000