primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnH-GUG-psbA_p1 trnH-GUG-psbA 1 TCACAATCCACTGCCTTGAG CCTCTAGACCTAGCTGCTGT 20 20 50.0 55.0 57.8 57.9 0.0 13.4 0.255492 100 507 492-492 1.000000 80.9 trnH-GUG-psbA_p2 trnH-GUG-psbA 2 TCACAATCCACTGCCTTGAG GTTGACAGTCAAGGTCGTGT 20 20 50.0 50.0 57.8 58.1 0.0 16.7 0.253661 100 507 591-591 1.000000 80.4 trnH-GUG-psbA_p3 trnH-GUG-psbA 3 TCACAATCCACTGCCTTGAG TCAGTGCTATGCATGGTTCC 20 20 50.0 50.0 57.8 58.0 0.0 10.2 0.232280 100 507 878-878 1.000000 79.8 trnH-GUG-psbA_p4 trnH-GUG-psbA 4 TCACAATCCACTGCCTTGAG CAGTGCTATGCATGGTTCCT 20 20 50.0 50.0 57.8 58.0 0.0 10.2 0.238038 100 507 877-877 1.000000 79.7 trnH-GUG-psbA_p5 trnH-GUG-psbA 5 ACAAAGGAATGATGGGCGAA TCAGTGCTATGCATGGTTCC 20 20 45.0 50.0 57.8 58.0 0.0 10.2 0.257062 100 507 928-928 0.666667 64.6 rps16-trnQ-UUG_p1 rps16-trnQ-UUG 1 CAAGAATCCACAGCCGATCA GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 58.0 58.1 0.0 16.9 0.104521 6143 8063 2021-2023 1.000000 80.3 rps16-trnQ-UUG_p2 rps16-trnQ-UUG 2 CAGCCGATCATGTCCTTCAA GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 58.0 58.1 0.0 16.9 0.104521 6143 8063 2011-2013 1.000000 80.3 rps16-trnQ-UUG_p3 rps16-trnQ-UUG 3 GCCGATCATGTCCTTCAAGT GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 58.0 58.1 0.0 16.9 0.105939 6143 8063 2009-2011 1.000000 80.3 rps16-trnQ-UUG_p4 rps16-trnQ-UUG 4 AATCCACAGCCGATCATGTC GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 58.0 58.1 0.0 16.9 0.117059 6143 8063 2017-2019 1.000000 80.2 rps16-trnQ-UUG_p5 rps16-trnQ-UUG 5 GAATCCACAGCCGATCATGT GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 58.0 58.1 0.0 16.9 0.117059 6143 8063 2018-2020 1.000000 80.2 psbI-trnS-GCU_p1 psbI-trnS-GCU 1 AATCCTGGACGCGAGGAATA TGGACTAAAGCGACGGATTG 20 20 50.0 50.0 58.6 58.0 17.8 0.0 0.594578 9168 9309 232-236 1.000000 77.6 psbI-trnS-GCU_p2 psbI-trnS-GCU 2 ATCCTGGACGCGAGGAATAA TGGACTAAAGCGACGGATTG 20 20 50.0 50.0 58.6 58.0 17.8 0.0 0.594578 9168 9309 231-235 1.000000 77.6 psbI-trnS-GCU_p3 psbI-trnS-GCU 3 TAATCCTGGACGCGAGGAAT TGGACTAAAGCGACGGATTG 20 20 50.0 50.0 58.6 58.0 17.8 0.0 0.594578 9168 9309 233-237 1.000000 77.6 psbI-trnS-GCU_p4 psbI-trnS-GCU 4 AATCCTGGACGCGAGGAATA GTGGACTAAAGCGACGGATT 20 20 50.0 50.0 58.6 58.0 17.8 0.0 0.595966 9168 9309 233-237 1.000000 77.6 psbI-trnS-GCU_p5 psbI-trnS-GCU 5 ATCCTGGACGCGAGGAATAA GTGGACTAAAGCGACGGATT 20 20 50.0 50.0 58.6 58.0 17.8 0.0 0.595966 9168 9309 232-236 1.000000 77.6 atpF-atpH_p1 atpF-atpH 1 ATTAAACCCGAAACTCCCGG AATTTACGGACTGGTCGTGG 20 20 50.0 50.0 57.9 57.9 0.0 7.6 0.207263 14099 14590 587-616 1.000000 82.8 atpF-atpH_p2 atpF-atpH 2 ATTAAACCCGAAACTCCCGG TCGTGGCATTAGCGCTTTTA 20 20 50.0 45.0 57.9 58.3 0.0 18.7 0.390245 14099 14590 573-602 1.000000 81.5 atpF-atpH_p3 atpF-atpH 3 CCAGTAACCCAAGGAAACGA AATTTACGGACTGGTCGTGG 20 20 50.0 50.0 57.4 57.9 0.0 7.6 0.643320 14099 14590 560-589 1.000000 79.5 atpF-atpH_p4 atpF-atpH 4 CCAGTAACCCAAGGAAACGA TCGTGGCATTAGCGCTTTTA 20 20 50.0 45.0 57.4 58.3 0.0 18.7 0.826303 14099 14590 546-575 1.000000 78.1 atpF-atpH_p5 atpF-atpH 5 GGCCAGTAACCCAAGGAAAC AATTTACGGACTGGTCGTGG 20 20 55.0 50.0 58.7 57.9 0.0 7.6 0.834923 14099 14590 562-591 1.000000 78.0 atpH-atpI_p1 atpH-atpI 1 ATAACGGAAGCGGCAGAAAT TTTTTGCAACTTTAGCCGCG 20 20 45.0 45.0 58.0 58.5 1.4 0.0 0.556109 14837 15927 1179-1191 1.000000 76.3 atpH-atpI_p2 atpH-atpI 2 ATAACGGAAGCGGCAGAAAT CAAGCGGGATTCAAGCTCTT 20 20 45.0 50.0 58.0 58.5 1.4 5.7 0.581041 14837 15927 1200-1212 1.000000 76.1 atpH-atpI_p3 atpH-atpI 3 TACCTTGACCAACTCCAGGT TTTTTGCAACTTTAGCCGCG 20 20 50.0 45.0 57.9 58.5 0.0 0.0 0.630002 14837 15927 1235-1247 1.000000 75.7 atpH-atpI_p4 atpH-atpI 4 GATACCTTCTACGGCTTGGC TTTTTGCAACTTTAGCCGCG 20 20 55.0 45.0 58.1 58.5 0.0 0.0 0.650556 14837 15927 1264-1276 1.000000 75.5 atpH-atpI_p5 atpH-atpI 5 CGATACCTTCTACGGCTTGG TTTTTGCAACTTTAGCCGCG 20 20 55.0 45.0 57.9 58.5 0.0 0.0 0.653387 14837 15927 1265-1277 1.000000 75.5 trnfM-CAU-rps14_p1 trnfM-CAU-rps14 1 GCTACCAAACTGCTCTACCC CGTTGTTTTTCGACCGGAAG 20 20 55.0 50.0 58.0 58.0 0.0 9.5 0.038874 39402 39593 306-336 1.000000 83.9 trnfM-CAU-rps14_p2 trnfM-CAU-rps14 2 AAGGTTATGAGCCTTGCGAG CGTTGTTTTTCGACCGGAAG 20 20 50.0 50.0 58.0 58.0 0.0 9.5 0.043124 39402 39593 325-355 1.000000 83.9 trnfM-CAU-rps14_p3 trnfM-CAU-rps14 3 GATGTTGCGGAGACAGGATT CGTTGTTTTTCGACCGGAAG 20 20 50.0 50.0 58.0 58.0 0.0 9.5 0.043124 39402 39593 360-390 1.000000 83.9 trnfM-CAU-rps14_p4 trnfM-CAU-rps14 4 TTTGAACCCGTGACCTCAAG CGTTGTTTTTCGACCGGAAG 20 20 50.0 50.0 58.0 58.0 0.0 9.5 0.051492 39402 39593 342-372 1.000000 83.8 trnfM-CAU-rps14_p5 trnfM-CAU-rps14 5 ACAGGATTTGAACCCGTGAC CGTTGTTTTTCGACCGGAAG 20 20 50.0 50.0 58.1 58.0 0.0 9.5 0.121076 39402 39593 348-378 1.000000 83.3 rps14-psaB_p1 rps14-psaB 1 TGCCTTTTTCTCTCCCTCTG ACCAGTGGCTCTTTCCATTG 20 20 50.0 50.0 57.1 58.1 0.0 9.8 0.951968 39897 40038 301-303 1.000000 73.7 rps14-psaB_p2 rps14-psaB 2 TGCCTTTTTCTCTCCCTCTG CCAGTGGCTCTTTCCATTGT 20 20 50.0 50.0 57.1 58.1 0.0 0.0 0.951968 39897 40038 300-302 1.000000 73.7 rps14-psaB_p3 rps14-psaB 3 TGCCTTTTTCTCTCCCTCTG GCAGCTTTCTTGATTGCCTC 20 20 50.0 50.0 57.1 57.7 0.0 0.0 1.142029 39897 40038 225-227 1.000000 72.6 rps14-psaB_p4 rps14-psaB 4 TGCCTTTTTCTCTCCCTCTG GCTCTTTCCATTGTGCAAGC 20 20 50.0 50.0 57.1 58.3 0.0 0.0 1.160666 39897 40038 294-296 1.000000 72.1 rps14-psaB_p5 rps14-psaB 5 TGCCTTTTTCTCTCCCTCTG TGGCTCTTTCCATTGTGCAA 20 20 50.0 45.0 57.1 58.3 0.0 0.0 1.164927 39897 40038 296-298 1.000000 72.0 petA-psbJ_p1 petA-psbJ 1 ACGTGTCCAAGGTTTGTTGT CTGTGATCGGTTCAATGGGT 20 20 45.0 50.0 58.2 57.9 0.0 0.0 0.284881 66379 67552 1351-1351 1.000000 79.3 petA-psbJ_p2 petA-psbJ 2 ACGTGTCCAAGGTTTGTTGT TCCTGTGATCGGTTCAATGG 20 20 45.0 50.0 58.2 57.6 0.0 0.0 0.572604 66379 67552 1353-1353 1.000000 77.0 petA-psbJ_p3 petA-psbJ 3 ACGTGTCCAAGGTTTGTTGT CCTGTGATCGGTTCAATGGG 20 20 45.0 55.0 58.2 58.6 0.0 0.0 0.788499 66379 67552 1352-1352 1.000000 75.3 petA-psbJ_p4 petA-psbJ 4 TGGCATCTGTTATTCTGGCA CTGTGATCGGTTCAATGGGT 20 20 45.0 50.0 57.2 57.9 0.0 0.0 0.918847 66379 67552 1325-1325 1.000000 74.3 petA-psbJ_p5 petA-psbJ 5 CGTGTCCAAGGTTTGTTGTT CTGTGATCGGTTCAATGGGT 20 20 45.0 50.0 57.1 57.9 0.0 0.0 1.045372 66379 67552 1350-1350 1.000000 73.2 petL-petG_p1 petL-petG 1 TGAGCAAGATACGACTTATTTGA GATCACCGCGTCTGTATTGT 23 20 34.8 50.0 55.8 58.1 0.0 4.9 5.289338 69661 69837 300-300 1.000000 40.5 petL-petG_p2 petL-petG 2 TGAGCAAGATACGACTTATTTGA TGATCACCGCGTCTGTATTG 23 20 34.8 50.0 55.8 58.1 0.0 4.9 5.290665 69661 69837 301-301 1.000000 40.5 petL-petG_p3 petL-petG 3 TGAGCAAGATACGACTTATTTGA AAAGGTCCAACTGATCACCG 23 20 34.8 50.0 55.8 57.8 0.0 0.0 5.396913 69661 69837 312-312 1.000000 40.5 petL-petG_p4 petL-petG 4 TGAGCAAGATACGACTTATTTGA CTGATCACCGCGTCTGTATT 23 20 34.8 50.0 55.8 57.8 0.0 4.9 5.421747 69661 69837 302-302 1.000000 40.5 petL-petG_p5 petL-petG 5 TGAGCAAGATACGACTTATTTG GATCACCGCGTCTGTATTGT 22 20 36.4 50.0 54.3 58.1 0.0 4.9 5.741935 69661 69837 300-300 1.000000 40.5 petG-trnW-CCA_p1 petG-trnW-CCA 1 ACAATACAGACGCGGTGATC AGAACGTGGGTCTCCAAAAC 20 20 50.0 50.0 58.1 58.0 12.5 0.0 0.114258 69952 70065 201-202 1.000000 81.5 petG-trnW-CCA_p2 petG-trnW-CCA 2 CAATACAGACGCGGTGATCA AGAACGTGGGTCTCCAAAAC 20 20 50.0 50.0 58.1 58.0 12.5 0.0 0.115584 69952 70065 200-201 1.000000 81.5 petG-trnW-CCA_p3 petG-trnW-CCA 3 ACAATACAGACGCGGTGATC AGCGCTCTTAGTTCAGTTCG 20 20 50.0 50.0 58.1 58.0 12.5 2.6 0.093457 69952 70065 223-224 1.000000 81.4 petG-trnW-CCA_p4 petG-trnW-CCA 4 CAATACAGACGCGGTGATCA AGCGCTCTTAGTTCAGTTCG 20 20 50.0 50.0 58.1 58.0 12.5 2.6 0.094784 69952 70065 222-223 1.000000 81.4 petG-trnW-CCA_p5 petG-trnW-CCA 5 ACAATACAGACGCGGTGATC CAAAACCCGATGTCGTAGGT 20 20 50.0 50.0 58.1 57.9 12.5 1.4 0.166379 69952 70065 187-188 1.000000 81.2 trnI-CAU-ycf2_p1 trnI-CAU-ycf2 1 GTTGGGCGCTTTAACCATTC TGTGAGTGAAAGATCCCACTG 20 21 50.0 47.6 58.0 57.6 7.6 15.1 1.416624 89830 89897 212-212 1.000000 69.4 trnI-CAU-ycf2_p2 trnI-CAU-ycf2 2 GTTGGGCGCTTTAACCATTC TCCCACTGAATCGAATTTGGT 20 21 50.0 42.9 58.0 57.6 7.6 0.0 1.442506 89830 89897 199-199 1.000000 69.3 trnI-CAU-ycf2_p3 trnI-CAU-ycf2 3 GTTGGGCGCTTTAACCATTC GTGAGTGAAAGATCCCACTGA 20 21 50.0 47.6 58.0 57.3 7.6 15.1 1.694340 89830 89897 211-211 1.000000 67.2 trnI-CAU-ycf2_p4 trnI-CAU-ycf2 4 GTTGGGCGCTTTAACCATTC CCACTGAATCGAATTTGGTCC 20 21 50.0 47.6 58.0 57.2 7.6 0.0 1.774086 89830 89897 197-197 1.000000 66.6 trnI-CAU-ycf2_p5 trnI-CAU-ycf2 5 GTTGGGCGCTTTAACCATTC CCCACTGAATCGAATTTGGTC 20 21 50.0 47.6 58.0 57.2 7.6 0.0 1.774086 89830 89897 198-198 1.000000 66.6 ndhF_p1 ndhF 1 ACGAAGGGGACTAAACAGGA GAGAAGAGCTGGTGAATCGG 20 20 50.0 55.0 58.0 58.1 0.0 0.0 0.086561 114215 116437 2669-2672 1.000000 80.4 ndhF_p2 ndhF 2 ACGAAGGGGACTAAACAGGA AGAGCTGGTGAATCGGAAAC 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.120412 114215 116437 2665-2668 1.000000 80.1 ndhF_p3 ndhF 3 TTTAGGCAGAATACCGTCGC GAGAAGAGCTGGTGAATCGG 20 20 50.0 55.0 58.1 58.1 0.0 0.0 0.136186 114215 116437 2784-2787 1.000000 80.0 ndhF_p4 ndhF 4 TTTAGGCAGAATACCGTCGC AGAGCTGGTGAATCGGAAAC 20 20 50.0 50.0 58.1 57.9 0.0 0.0 0.170037 114215 116437 2780-2783 1.000000 79.7 ndhF_p5 ndhF 5 ACGAAGGGGACTAAACAGGA GAGCTGGTGAATCGGAAACA 20 20 50.0 50.0 58.0 58.2 0.0 0.0 0.211397 114215 116437 2664-2667 1.000000 79.4 ndhF-rpl32_p1 ndhF-rpl32 1 GGAACAAGCAGAAGTCCCAA TTTACCGCTGCCCAATATCC 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.043084 116438 117573 1314-1314 1.000000 80.4 ndhF-rpl32_p2 ndhF-rpl32 2 CAGTCGGAACAAGCAGAAGT TTTACCGCTGCCCAATATCC 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.153260 116438 117573 1319-1319 1.000000 79.6 ndhF-rpl32_p3 ndhF-rpl32 3 AGTCGGAACAAGCAGAAGTC TTTACCGCTGCCCAATATCC 20 20 50.0 50.0 57.8 58.0 0.0 0.0 0.180683 116438 117573 1318-1318 1.000000 79.3 ndhF-rpl32_p4 ndhF-rpl32 4 ACAAGCAGAAGTCCCAATCC TTTACCGCTGCCCAATATCC 20 20 50.0 50.0 57.8 58.0 0.0 0.0 0.230916 116438 117573 1311-1311 1.000000 78.9 ndhF-rpl32_p5 ndhF-rpl32 5 CTGGAAGTGGAACGAAAGGT TTTACCGCTGCCCAATATCC 20 20 50.0 50.0 57.7 58.0 0.0 0.0 0.280458 116438 117573 1277-1277 1.000000 78.6 ccsA_p1 ccsA 1 TGGCGGCATCCTCTAAAAAG GGTTCTCAAAAACTCGCACA 20 20 50.0 45.0 58.2 56.9 8.0 0.0 1.376557 119174 120139 1135-1135 1.000000 69.3 ccsA_p2 ccsA 2 TGGCGGCATCCTCTAAAAAG TGGTTCTCAAAAACTCGCAC 20 20 50.0 45.0 58.2 56.9 8.0 0.0 1.376557 119174 120139 1136-1136 1.000000 69.3 ccsA_p3 ccsA 3 TGGCGGCATCCTCTAAAAAG AAACTCGCACAAACTTTCGT 20 20 50.0 40.0 58.2 56.8 8.0 0.0 1.446181 119174 120139 1126-1126 1.000000 68.8 ccsA_p4 ccsA 4 TGGCGGCATCCTCTAAAAAG AACTCGCACAAACTTTCGTT 20 20 50.0 40.0 58.2 56.8 8.0 0.0 1.446181 119174 120139 1125-1125 1.000000 68.8 ccsA_p5 ccsA 5 TGGCGGCATCCTCTAAAAAG GGTTCTCAAAAACTCGCACAA 20 21 50.0 42.9 58.2 57.6 8.0 0.0 1.664356 119174 120139 1135-1135 1.000000 67.0 ccsA-ndhD_p1 ccsA-ndhD 1 TGTGGCTTCCATGGGATTTC TCCTGATTTCGTTCTCTCGC 20 20 50.0 50.0 58.1 57.7 13.0 0.0 0.428278 120140 120366 403-403 1.000000 78.2 ccsA-ndhD_p2 ccsA-ndhD 2 GTGGCTTCCATGGGATTTCT TCCTGATTTCGTTCTCTCGC 20 20 50.0 50.0 57.9 57.7 13.0 0.0 0.429555 120140 120366 402-402 1.000000 78.2 ccsA-ndhD_p3 ccsA-ndhD 3 TGTGGCTTCCATGGGATTTC CCTGATTTCGTTCTCTCGCT 20 20 50.0 50.0 58.1 57.7 13.0 0.0 0.434523 120140 120366 402-402 1.000000 78.1 ccsA-ndhD_p4 ccsA-ndhD 4 GTGGCTTCCATGGGATTTCT CCTGATTTCGTTCTCTCGCT 20 20 50.0 50.0 57.9 57.7 13.0 0.0 0.435800 120140 120366 401-401 1.000000 78.1 ccsA-ndhD_p5 ccsA-ndhD 5 TTGTGGCTTCCATGGGATTT TCCTGATTTCGTTCTCTCGC 20 20 45.0 50.0 57.7 57.7 13.0 0.0 0.603581 120140 120366 404-404 1.000000 76.8 ycf1_p1 ycf1 1 TGGAATCCTCTGTCCAAGTG AGGCACAACTTGAGCAATGA 20 20 50.0 45.0 56.8 58.0 0.0 12.5 1.173194 132742 132861 229-229 1.000000 72.7 ycf1_p2 ycf1 2 TGGAATCCTCTGTCCAAGTGA AGGCACAACTTGAGCAATGA 21 20 47.6 45.0 58.4 58.0 0.0 12.5 1.394596 132742 132861 229-229 1.000000 70.9 ycf1_p3 ycf1 3 GGAATCCTCTGTCCAAGTGA AGGCACAACTTGAGCAATGA 20 20 50.0 45.0 56.5 58.0 0.0 12.5 1.467381 132742 132861 228-228 1.000000 70.4 ycf1_p4 ycf1 4 TGGAATCCTCTGTCCAAGTG GGCACAACTTGAGCAATGAG 20 20 50.0 50.0 56.8 57.7 0.0 12.5 1.501577 132742 132861 228-228 1.000000 70.1 ycf1_p5 ycf1 5 ATGGAATCCTCTGTCCAAGTG AGGCACAACTTGAGCAATGA 21 20 47.6 45.0 57.4 58.0 0.0 12.5 1.655961 132742 132861 230-230 1.000000 68.8 ycf2-trnI-CAU_p1 ycf2-trnI-CAU 1 TGTGAGTGAAAGATCCCACTG GTTGGGCGCTTTAACCATTC 21 20 47.6 50.0 57.6 58.0 15.1 7.6 1.416624 157299 157366 212-212 1.000000 69.4 ycf2-trnI-CAU_p2 ycf2-trnI-CAU 2 TCCCACTGAATCGAATTTGGT GTTGGGCGCTTTAACCATTC 21 20 42.9 50.0 57.6 58.0 0.0 7.6 1.442506 157299 157366 199-199 1.000000 69.3 ycf2-trnI-CAU_p3 ycf2-trnI-CAU 3 GTGAGTGAAAGATCCCACTGA GTTGGGCGCTTTAACCATTC 21 20 47.6 50.0 57.3 58.0 15.1 7.6 1.694340 157299 157366 211-211 1.000000 67.2 ycf2-trnI-CAU_p4 ycf2-trnI-CAU 4 CCACTGAATCGAATTTGGTCC GTTGGGCGCTTTAACCATTC 21 20 47.6 50.0 57.2 58.0 0.0 7.6 1.774086 157299 157366 197-197 1.000000 66.6 ycf2-trnI-CAU_p5 ycf2-trnI-CAU 5 CCCACTGAATCGAATTTGGTC GTTGGGCGCTTTAACCATTC 21 20 47.6 50.0 57.2 58.0 0.0 7.6 1.774086 157299 157366 198-198 1.000000 66.6