feature_id feature_type parent_gene label_name start end strand length_bp region pi variable_sites indel_sites conserved_left_bp conserved_right_bp primer_available species_resolution unique_haplotype_count species_specific_haplotype_ratio interspecific_divergence alignment_reliability markerseek_score rrn5 rRNA rrn5 rrn5 163 278 -1 116 SSC 0.000000 0 116 19 300 no 0.000000 2 0.000000 NA 0.000000 7.700000 IGS_001 igs rrn5|rnl rrn5-rnl 279 304 0 26 SSC 0.000000 0 26 135 300 no 0.000000 2 0.000000 NA 0.000000 16.400000 rnl rRNA rnl rnl 305 3229 -1 2925 SSC 0.005470 16 2925 161 220 yes 0.500000 3 0.666667 NA 0.000000 34.100000 IGS_002 igs rnl|trnA rnl-trnA 3230 3285 0 56 IRb 0.000000 0 56 258 164 no 0.000000 2 0.000000 NA 0.000000 18.600000 trnA tRNA trnA trnA 3286 3358 -1 73 IRb 0.000000 0 73 300 91 no 0.000000 2 0.000000 NA 0.000000 13.100000 IGS_003 igs trnA|trnI trnA-trnI 3359 3361 0 3 IRb 0.000000 0 3 300 88 no 0.000000 2 0.000000 NA 0.000000 12.800000 trnI tRNA trnI trnI 3362 3435 -1 74 IRb 0.000000 0 74 300 14 no 0.000000 2 0.000000 NA 0.000000 7.300000 IGS_004 igs trnI|rns trnI-rns 3436 3560 0 125 IRb 0.032000 4 125 300 86 no 0.500000 3 0.666667 NA 0.000000 40.500000 rns rRNA rns rns 3561 5040 -1 1480 IRb 0.001351 2 1480 72 18 no 0.500000 3 0.666667 NA 0.000000 24.000000 IGS_005 igs rns|ycf37 rns-ycf37 5041 5241 0 201 IRb 0.024876 5 201 300 249 no 0.500000 3 0.666667 NA 0.000000 44.900000 ycf37 gene ycf37 ycf37 5242 5781 -1 540 LSC 0.002778 3 145 4 3 no 1.000000 4 1.000000 0.003442 0.740741 43.600000 IGS_006 igs ycf37|psaM ycf37-psaM 5782 5929 0 148 LSC 0.013514 4 0 118 98 no 0.500000 3 0.666667 0.013514 1.000000 44.900000 psaM gene psaM psaM 5930 6022 1 93 LSC 0.000000 0 0 11 5 no 0.000000 1 0.000000 0.000000 1.000000 19.100000 IGS_007 igs psaM|chlI psaM-chlI 6023 6136 0 114 LSC 0.032164 7 4 104 22 yes 1.000000 4 1.000000 0.029559 1.000000 65.400000 chlI gene chlI chlI 6137 7159 1 1023 LSC 0.012382 23 0 4 25 no 1.000000 4 1.000000 0.012382 1.000000 52.400000 IGS_008 igs chlI|trnF chlI-trnF 7160 7284 0 125 LSC 0.019608 4 15 3 98 no 1.000000 4 1.000000 0.020295 0.952000 54.500000 trnF tRNA trnF trnF 7285 7357 1 73 LSC 0.000000 0 0 12 25 no 0.000000 1 0.000000 0.000000 1.000000 19.700000 IGS_009 igs trnF|petB trnF-petB 7358 7410 0 53 LSC 0.025157 2 0 85 83 no 0.000000 2 0.000000 0.025157 1.000000 41.000000 petB gene petB petB 7411 8058 1 648 LSC 0.008230 10 0 12 20 no 1.000000 4 1.000000 0.008230 1.000000 50.300000 IGS_010 igs petB|petD petB-petD 8059 8146 0 88 LSC 0.017045 3 0 18 8 no 0.500000 3 0.666667 0.017045 1.000000 40.700000 petD gene petD petD 8147 8629 1 483 LSC 0.008972 8 0 16 66 no 0.500000 3 0.666667 0.008972 1.000000 39.200000 IGS_011 igs petD|atpA petD-atpA 8630 8732 0 103 LSC 0.021036 4 0 66 108 no 0.500000 3 0.666667 0.021036 1.000000 47.400000 atpA gene atpA atpA 8733 10238 -1 1506 LSC 0.005533 15 0 0 2 no 1.000000 4 1.000000 0.005533 1.000000 47.500000 IGS_012 igs atpA|atpD atpA-atpD 10239 10371 0 133 LSC 0.021303 5 4 95 54 no 1.000000 4 1.000000 0.021925 0.969925 58.700000 atpD gene atpD atpD 10372 10989 -1 618 LSC 0.005124 6 0 7 40 no 1.000000 4 1.000000 0.005124 1.000000 47.800000 IGS_013 igs atpD|atpF atpD-atpF 10990 10991 0 2 LSC 0.000000 0 0 98 38 no 0.000000 1 0.000000 NA 1.000000 21.600000 atpF gene atpF atpF 10992 11516 -1 525 LSC 0.004127 4 0 100 139 no 1.000000 4 1.000000 0.004127 1.000000 52.500000 IGS_014 igs atpF|atpG atpF-atpG 11517 11586 0 70 LSC 0.000000 0 0 114 69 no 0.000000 1 0.000000 0.000000 1.000000 23.900000 atpG gene atpG atpG 11587 12057 -1 471 LSC 0.006016 5 0 184 48 no 1.000000 4 1.000000 0.006016 1.000000 48.700000 IGS_015 igs atpG|atpH atpG-atpH 12058 12171 0 114 LSC 0.013158 3 0 38 300 no 1.000000 4 1.000000 0.013158 1.000000 49.600000 atpH gene atpH atpH 12172 12420 -1 249 LSC 0.000000 0 0 22 266 no 0.000000 1 0.000000 0.000000 1.000000 20.400000 IGS_016 igs atpH|atpI atpH-atpI 12421 12513 0 93 LSC 0.000000 0 0 271 173 no 0.000000 1 0.000000 0.000000 1.000000 31.700000 atpI gene atpI atpI 12514 13260 -1 747 LSC 0.004909 7 0 300 15 no 1.000000 4 1.000000 0.004909 1.000000 48.300000 IGS_017 igs atpI|tsf atpI-tsf 13261 13494 0 234 LSC 0.013950 6 7 293 102 no 1.000000 4 1.000000 0.013950 0.970085 57.300000 tsf gene tsf tsf 13495 14097 -1 603 LSC 0.002488 3 0 3 27 no 0.500000 3 0.666667 0.002488 1.000000 36.300000 IGS_018 igs tsf|rps2 tsf-rps2 14098 14150 0 53 LSC 0.009434 1 0 23 0 no 0.250000 2 0.500000 0.009434 1.000000 30.000000 rps2 gene rps2 rps2 14151 14846 -1 696 LSC 0.006226 8 0 25 124 no 1.000000 4 1.000000 0.006226 1.000000 49.900000 IGS_019 igs rps2|rpoC2 rps2-rpoC2 14847 15004 0 158 LSC 0.006329 2 0 125 26 no 0.250000 2 0.500000 0.006329 1.000000 29.800000 rpoC2 gene rpoC2 rpoC2 15005 18841 -1 3837 LSC 0.008383 61 0 21 28 no 1.000000 4 1.000000 0.008383 1.000000 46.700000 IGS_020 igs rpoC2|rpoC1 rpoC2-rpoC1 18842 18854 0 13 LSC 0.000000 0 0 179 15 no 0.000000 1 0.000000 NA 1.000000 19.900000 rpoC1 gene rpoC1 rpoC1 18855 20687 -1 1833 LSC 0.012730 42 0 192 36 no 1.000000 4 1.000000 0.012730 1.000000 54.300000 IGS_021 igs rpoC1|rpoB rpoC1-rpoB 20688 20735 0 48 LSC 0.013889 1 0 38 252 no 0.000000 2 0.000000 0.013889 1.000000 30.500000 rpoB gene rpoB rpoB 20736 24119 -1 3384 LSC 0.007043 46 0 11 1 no 1.000000 4 1.000000 0.007043 1.000000 45.000000 IGS_022 igs rpoB|rps20 rpoB-rps20 24120 24192 0 73 LSC 0.006944 1 1 149 15 no 0.250000 2 0.500000 0.006944 0.986301 30.600000 rps20 gene rps20 rps20 24193 24498 -1 306 LSC 0.011438 6 0 71 26 no 0.500000 3 0.666667 0.011438 1.000000 37.800000 IGS_023 igs rps20|trnS rps20-trnS 24499 24634 0 136 LSC 0.015931 4 0 59 88 no 0.500000 3 0.666667 0.015931 1.000000 43.400000 trnS tRNA trnS trnS 24635 24722 -1 88 LSC 0.000000 0 0 14 0 no 0.000000 1 0.000000 0.000000 1.000000 18.800000 IGS_024 igs trnS|psaD trnS-psaD 24723 24921 0 199 LSC 0.039216 13 18 102 30 yes 1.000000 4 1.000000 0.035646 0.909548 68.800000 psaD gene psaD psaD 24922 25320 -1 399 LSC 0.005430 4 0 7 163 no 1.000000 4 1.000000 0.005430 1.000000 43.800000 IGS_025 igs psaD|trnM psaD-trnM 25321 25372 0 52 LSC 0.000000 0 0 227 111 no 0.000000 1 0.000000 0.000000 1.000000 27.100000 trnM tRNA trnM trnM 25373 25446 -1 74 LSC 0.000000 0 0 279 37 no 0.000000 1 0.000000 0.000000 1.000000 21.500000 IGS_026 igs trnM|trnP trnM-trnP 25447 25493 0 47 LSC 0.021277 2 0 300 110 no 0.500000 3 0.666667 0.021277 1.000000 51.300000 trnP tRNA trnP trnP 25494 25567 -1 74 LSC 0.000000 0 0 3 36 no 0.000000 1 0.000000 0.000000 1.000000 19.000000 IGS_027 igs trnP|chlB trnP-chlB 25568 25641 0 74 LSC 0.006757 1 0 77 72 no 0.250000 2 0.500000 0.006757 1.000000 33.600000 chlB gene chlB chlB 25642 27174 -1 1533 LSC 0.006741 20 0 37 67 no 1.000000 4 1.000000 0.006741 1.000000 51.100000 IGS_028 igs chlB|trnY chlB-trnY 27175 27386 0 212 LSC 0.016509 7 0 23 99 no 1.000000 4 1.000000 0.016509 1.000000 50.800000 trnY tRNA trnY trnY 27387 27467 1 81 LSC 0.000000 0 0 20 18 no 0.000000 1 0.000000 0.000000 1.000000 20.100000 IGS_029 igs trnY|cp30 trnY-cp30 27468 27529 0 62 LSC 0.061828 7 0 101 111 yes 1.000000 4 1.000000 0.061828 1.000000 80.100000 cp30 gene cp30 cp30 27530 28225 -1 696 LSC 0.006944 9 0 9 82 no 1.000000 4 1.000000 0.006944 1.000000 49.200000 IGS_030 igs cp30|ccs1 cp30-ccs1 28226 28363 0 138 LSC 0.012077 3 0 3 36 no 1.000000 4 1.000000 0.012077 1.000000 45.900000 ccs1 gene ccs1 ccs1 28364 29650 -1 1287 LSC 0.008806 21 0 5 71 no 1.000000 4 1.000000 0.008806 1.000000 50.100000 IGS_031 igs ccs1|ycf46 ccs1-ycf46 29651 29700 0 50 LSC 0.000000 0 0 95 21 no 0.000000 1 0.000000 0.000000 1.000000 20.300000 ycf46 gene ycf46 ycf46 29701 31176 -1 1476 LSC 0.005194 14 0 145 147 no 1.000000 4 1.000000 0.005194 1.000000 58.100000 IGS_032 igs ycf46|rpl34 ycf46-rpl34 31177 31225 0 49 LSC 0.000000 0 0 203 98 no 0.000000 1 0.000000 0.000000 1.000000 26.100000 rpl34 gene rpl34 rpl34 31226 31363 -1 138 LSC 0.004831 1 0 252 75 no 0.000000 2 0.000000 0.004831 1.000000 27.500000 IGS_033 igs rpl34|secA rpl34-secA 31364 31462 0 99 LSC 0.021886 4 0 39 96 no 0.500000 3 0.666667 0.021886 1.000000 45.900000 secA gene secA secA 31463 34096 -1 2634 LSC 0.007024 34 0 0 13 no 1.000000 4 1.000000 0.007024 1.000000 46.200000 IGS_034 igs secA|ycf54 secA-ycf54 34097 34337 0 241 LSC 0.019364 9 9 155 23 no 1.000000 4 1.000000 0.019632 1.000000 57.000000 ycf54 gene ycf54 ycf54 34338 34718 -1 381 LSC 0.008749 6 0 13 67 no 1.000000 4 1.000000 0.008749 1.000000 46.100000 IGS_035 igs ycf54|thiG ycf54-thiG 34719 34934 0 216 LSC 0.021605 9 0 50 65 no 1.000000 4 1.000000 0.021605 1.000000 56.200000 thiG gene thiG thiG 34935 35753 -1 819 LSC 0.009361 15 0 8 26 no 1.000000 4 1.000000 0.009361 1.000000 50.900000 IGS_036 igs thiG|trnG thiG-trnG 35754 35886 0 133 LSC 0.039744 9 12 6 90 yes 1.000000 4 1.000000 0.041174 0.977444 69.200000 trnG tRNA trnG trnG 35887 35958 -1 72 LSC 0.000000 0 0 5 18 no 0.000000 1 0.000000 0.000000 1.000000 19.100000 IGS_037 igs trnG|psbI trnG-psbI 35959 36111 0 153 LSC 0.011983 3 0 77 128 no 0.500000 3 0.666667 0.011983 1.000000 41.700000 psbI gene psbI psbI 36112 36237 -1 126 LSC 0.000000 0 0 31 2 no 0.000000 1 0.000000 0.000000 1.000000 18.900000 IGS_038 igs psbI|dnaK psbI-dnaK 36238 36332 0 95 LSC 0.021053 4 0 157 87 no 0.500000 3 0.666667 0.021053 1.000000 49.400000 dnaK gene dnaK dnaK 36333 38225 -1 1893 LSC 0.004930 17 0 19 43 no 1.000000 4 1.000000 0.004930 1.000000 47.700000 IGS_039 igs dnaK|trnS dnaK-trnS 38226 38359 0 134 LSC 0.023632 6 0 153 90 no 1.000000 4 1.000000 0.023632 1.000000 60.500000 trnS tRNA trnS trnS 38360 38449 -1 90 LSC 0.000000 0 0 4 0 no 0.000000 1 0.000000 0.000000 1.000000 18.800000 IGS_040 igs trnS|trnM trnS-trnM 38450 38456 0 7 LSC 0.166667 2 0 94 99 yes 0.500000 3 0.666667 NA 1.000000 70.200000 trnM tRNA trnM trnM 38457 38529 -1 73 LSC 0.000000 0 0 5 26 no 0.000000 1 0.000000 0.000000 1.000000 19.100000 IGS_041 igs trnM|trnD trnM-trnD 38530 38686 0 157 LSC 0.022293 7 0 78 108 no 1.000000 4 1.000000 0.022293 1.000000 59.000000 trnD tRNA trnD trnD 38687 38761 1 75 LSC 0.000000 0 0 5 33 no 0.000000 1 0.000000 0.000000 1.000000 19.100000 IGS_042 igs trnD|groEL trnD-groEL 38762 38782 0 21 LSC 0.000000 0 0 80 12 no 0.000000 1 0.000000 0.000000 1.000000 19.700000 groEL gene groEL groEL 38783 40321 -1 1539 LSC 0.004873 15 0 101 87 no 1.000000 4 1.000000 0.004873 1.000000 53.600000 IGS_043 igs groEL|petJ groEL-petJ 40322 40506 0 185 LSC 0.011712 4 0 300 133 no 1.000000 4 1.000000 0.011712 1.000000 55.400000 petJ gene petJ petJ 40507 40839 -1 333 LSC 0.020020 13 0 36 282 no 0.500000 3 0.666667 0.020020 1.000000 45.400000 IGS_044 igs petJ|psbV petJ-psbV 40840 40944 0 105 LSC 0.000000 0 0 8 177 no 0.000000 1 0.000000 0.000000 1.000000 19.400000 psbV gene psbV psbV 40945 41430 -1 486 LSC 0.006516 6 0 113 60 no 1.000000 4 1.000000 0.006516 1.000000 50.400000 IGS_045 igs psbV|ycf66 psbV-ycf66 41431 41494 0 64 LSC 0.007812 1 0 53 108 no 0.250000 2 0.500000 0.007812 1.000000 32.900000 ycf66 gene ycf66 ycf66 41495 41818 -1 324 LSC 0.001543 1 0 3 61 no 0.250000 2 0.500000 0.001543 1.000000 25.200000 IGS_046 igs ycf66|psbX ycf66-psbX 41819 41949 0 131 LSC 0.007634 2 0 215 255 no 0.500000 3 0.666667 0.007634 1.000000 48.500000 psbX gene psbX psbX 41950 42081 -1 132 LSC 0.000000 0 0 51 123 no 0.000000 1 0.000000 0.000000 1.000000 22.600000 IGS_047 igs psbX|rpl27 psbX-rpl27 42082 42530 0 449 LSC 0.013827 12 3 183 36 no 1.000000 4 1.000000 0.013827 0.993318 53.500000 rpl27 gene rpl27 rpl27 42531 42785 -1 255 LSC 0.010458 5 0 26 86 no 1.000000 4 1.000000 0.010458 1.000000 46.600000 IGS_048 igs rpl27|rpl19 rpl27-rpl19 42786 43188 0 403 LSC 0.011993 9 0 56 134 no 1.000000 4 1.000000 0.011993 1.000000 52.000000 rpl19 gene rpl19 rpl19 43189 43575 1 387 LSC 0.007752 6 0 119 121 no 1.000000 4 1.000000 0.007752 1.000000 53.700000 IGS_049 igs rpl19|trnM rpl19-trnM 43576 43630 0 55 LSC 0.000000 0 0 15 66 no 0.000000 1 0.000000 0.000000 1.000000 19.900000 trnM tRNA trnM trnM 43631 43709 -1 79 LSC 0.006329 1 0 70 32 no 0.250000 2 0.500000 0.006329 1.000000 30.300000 IGS_050 igs trnM|ycf47 trnM-ycf47 43710 44175 0 466 LSC 0.012876 11 5 12 219 no 1.000000 4 1.000000 0.012941 1.000000 51.900000 ycf47 gene ycf47 ycf47 44176 44406 -1 231 LSC 0.002165 1 0 0 88 no 0.250000 2 0.500000 0.002165 1.000000 25.000000 IGS_051 igs ycf47|petM ycf47-petM 44407 44485 0 79 LSC 0.000000 0 0 11 9 no 0.000000 1 0.000000 0.000000 1.000000 19.400000 petM gene petM petM 44486 44584 -1 99 LSC 0.011785 2 0 90 62 no 0.500000 3 0.666667 0.011785 1.000000 40.600000 IGS_052 igs petM|petN petM-petN 44585 44620 0 36 LSC 0.000000 0 0 47 26 no 0.000000 1 0.000000 0.000000 1.000000 20.700000 petN gene petN petN 44621 44710 -1 90 LSC 0.005556 1 0 83 80 no 0.250000 2 0.500000 0.005556 1.000000 33.300000 IGS_053 igs petN|acsF petN-acsF 44711 45117 0 407 LSC 0.010000 8 8 63 194 no 1.000000 4 1.000000 0.010020 0.980344 53.200000 acsF gene acsF acsF 45118 46218 1 1101 LSC 0.009537 20 0 80 4 no 1.000000 4 1.000000 0.009537 1.000000 50.600000 IGS_054 igs acsF|ycf42 acsF-ycf42 46219 46350 0 132 LSC 0.008838 2 0 3 38 no 0.500000 3 0.666667 0.008838 1.000000 34.200000 ycf42 gene ycf42 ycf42 46351 46911 1 561 LSC 0.001783 2 0 121 11 no 0.500000 3 0.666667 0.001783 1.000000 35.600000 IGS_055 igs ycf42|rpl35 ycf42-rpl35 46912 47008 0 97 LSC 0.010309 2 0 300 61 no 0.500000 3 0.666667 0.010309 1.000000 39.900000 rpl35 gene rpl35 rpl35 47009 47203 1 195 LSC 0.007692 3 0 17 155 no 0.500000 3 0.666667 0.007692 1.000000 34.800000 IGS_056 igs rpl35|rpl20 rpl35-rpl20 47204 47224 0 21 LSC 0.000000 0 0 39 134 no 0.000000 1 0.000000 0.000000 1.000000 21.700000 rpl20 gene rpl20 rpl20 47225 47569 1 345 LSC 0.003382 2 0 60 49 no 0.500000 3 0.666667 0.003382 1.000000 35.000000 IGS_057 igs rpl20|ilvH rpl20-ilvH 47570 47656 0 87 LSC 0.011494 2 0 135 45 no 0.500000 3 0.666667 0.011494 1.000000 39.500000 ilvH gene ilvH ilvH 47657 48253 1 597 LSC 0.014796 17 0 16 0 yes 1.000000 4 1.000000 0.014796 1.000000 53.900000 IGS_058 igs ilvH|ycf34 ilvH-ycf34 48254 48500 0 247 LSC 0.025588 12 6 46 38 no 1.000000 4 1.000000 0.025588 0.975709 60.100000 ycf34 gene ycf34 ycf34 48501 48785 -1 285 LSC 0.011111 6 0 35 10 no 1.000000 4 1.000000 0.011111 1.000000 45.900000 IGS_059 igs ycf34|trnC ycf34-trnC 48786 49216 0 431 LSC 0.018948 16 2 56 11 no 1.000000 4 1.000000 0.019004 1.000000 54.800000 trnC tRNA trnC trnC 49217 49287 -1 71 LSC 0.007042 1 0 21 29 no 0.250000 2 0.500000 0.007042 1.000000 29.900000 IGS_060 igs trnC|rbcL trnC-rbcL 49288 49555 0 268 LSC 0.013060 7 0 59 300 no 1.000000 4 1.000000 0.013060 1.000000 51.100000 rbcL gene rbcL rbcL 49556 51022 1 1467 LSC 0.005453 15 0 98 32 no 1.000000 4 1.000000 0.005453 1.000000 49.900000 IGS_061 igs rbcL|rbcS rbcL-rbcS 51023 51258 0 236 LSC 0.012006 5 0 4 11 no 0.500000 3 0.666667 0.012006 1.000000 36.500000 rbcS gene rbcS rbcS 51259 51678 1 420 LSC 0.004762 4 0 122 65 no 1.000000 4 1.000000 0.004762 1.000000 48.200000 IGS_062 igs rbcS|trnR rbcS-trnR 51679 52042 0 364 LSC 0.005952 4 1 230 107 no 1.000000 4 1.000000 0.005959 1.000000 51.200000 trnR tRNA trnR trnR 52043 52115 1 73 LSC 0.000000 0 0 60 34 no 0.000000 1 0.000000 0.000000 1.000000 21.300000 IGS_063 igs trnR|trnE trnR-trnE 52116 52171 0 56 LSC 0.026786 3 0 133 85 no 0.250000 2 0.500000 0.026786 1.000000 48.600000 trnE tRNA trnE trnE 52172 52244 1 73 LSC 0.000000 0 0 19 12 no 0.000000 1 0.000000 0.000000 1.000000 19.700000 IGS_064 igs trnE|psaA trnE-psaA 52245 52483 0 239 LSC 0.016039 7 0 92 89 no 1.000000 4 1.000000 0.016039 1.000000 55.100000 psaA gene psaA psaA 52484 54733 1 2250 LSC 0.004667 19 0 124 185 no 1.000000 4 1.000000 0.004667 1.000000 54.600000 IGS_065 igs psaA|psaB psaA-psaB 54734 54754 0 21 LSC 0.000000 0 0 243 164 no 0.000000 1 0.000000 0.000000 1.000000 31.100000 psaB gene psaB psaB 54755 56959 1 2205 LSC 0.005593 23 0 264 16 no 1.000000 4 1.000000 0.005593 1.000000 47.300000 IGS_066 igs psaB|rps14 psaB-rps14 56960 57058 0 99 LSC 0.005051 1 0 60 25 no 0.250000 2 0.500000 0.005051 1.000000 28.800000 rps14 gene rps14 rps14 57059 57361 1 303 LSC 0.001650 1 0 82 14 no 0.250000 2 0.500000 0.001650 1.000000 25.700000 IGS_067 igs rps14|petG rps14-petG 57362 57408 0 47 LSC 0.014184 1 0 277 300 no 0.000000 2 0.000000 0.014184 1.000000 42.800000 petG gene petG petG 57409 57522 -1 114 LSC 0.000000 0 0 32 235 no 0.000000 1 0.000000 0.000000 1.000000 21.100000 IGS_068 igs petG|psbK petG-psbK 57523 57655 0 133 LSC 0.000000 0 0 146 102 no 0.000000 1 0.000000 0.000000 1.000000 26.400000 psbK gene psbK psbK 57656 57790 -1 135 LSC 0.003704 1 0 279 64 no 0.250000 2 0.500000 0.003704 1.000000 30.800000 IGS_069 igs psbK|ccsA psbK-ccsA 57791 58118 0 328 LSC 0.031504 20 0 32 300 yes 1.000000 4 1.000000 0.031504 1.000000 62.300000 ccsA gene ccsA ccsA 58119 59105 -1 987 LSC 0.003377 6 0 18 34 no 1.000000 4 1.000000 0.003377 1.000000 47.400000 IGS_070 igs ccsA|chlL ccsA-chlL 59106 59535 0 430 LSC 0.002326 2 3 8 179 no 0.500000 3 0.666667 0.002336 1.000000 33.900000 chlL gene chlL chlL 59536 60420 1 885 LSC 0.008475 14 0 222 79 no 1.000000 4 1.000000 0.008475 1.000000 55.500000 IGS_071 igs chlL|chlN chlL-chlN 60421 60470 0 50 LSC 0.000000 0 0 114 29 no 0.000000 1 0.000000 0.000000 1.000000 20.900000 chlN gene chlN chlN 60471 61829 1 1359 LSC 0.010302 26 0 164 16 no 1.000000 4 1.000000 0.010302 1.000000 52.000000 IGS_072 igs chlN|psaF chlN-psaF 61830 61939 0 110 LSC 0.013636 3 5 153 49 no 0.500000 3 0.666667 0.014141 1.000000 46.700000 psaF gene psaF psaF 61940 62548 1 609 LSC 0.008758 10 0 89 50 no 1.000000 4 1.000000 0.008758 1.000000 53.500000 IGS_073 igs psaF|psaJ psaF-psaJ 62549 62606 0 58 LSC 0.017241 2 0 69 14 no 0.250000 2 0.500000 0.017241 1.000000 36.600000 psaJ gene psaJ psaJ 62607 62735 1 129 LSC 0.032300 7 0 0 7 no 0.500000 3 0.666667 0.032300 1.000000 49.400000 IGS_074 igs psaJ|cp74 psaJ-cp74 62736 62893 0 158 LSC 0.046237 12 19 6 25 yes 1.000000 4 1.000000 0.040050 0.936709 72.100000 cp74 gene cp74 cp74 62894 64471 1 1578 LSC 0.011301 35 0 40 29 yes 1.000000 4 1.000000 0.011301 1.000000 53.600000 IGS_075 igs cp74|petA cp74-petA 64472 64585 0 114 LSC 0.017544 4 5 6 51 no 1.000000 4 1.000000 0.017812 1.000000 55.400000 petA gene petA petA 64586 65533 -1 948 LSC 0.007560 14 0 32 47 no 1.000000 4 1.000000 0.007560 1.000000 51.400000 IGS_076 igs petA|tatC petA-tatC 65534 65644 0 111 LSC 0.028529 5 0 66 16 no 0.500000 3 0.666667 0.028529 1.000000 47.800000 tatC gene tatC tatC 65645 66427 -1 783 LSC 0.010643 16 0 8 16 no 1.000000 4 1.000000 0.010643 1.000000 51.700000 IGS_077 igs tatC|atpE tatC-atpE 66428 66448 0 21 LSC 0.023810 1 0 4 176 no 0.250000 2 0.500000 0.023810 1.000000 40.400000 atpE gene atpE atpE 66449 66853 -1 405 LSC 0.006584 5 0 4 9 no 1.000000 4 1.000000 0.006584 1.000000 44.500000 IGS_078 igs atpE|atpB atpE-atpB 66854 66868 0 15 LSC 0.044444 1 0 47 78 no 0.000000 2 0.000000 NA 1.000000 50.600000 atpB gene atpB atpB 66869 68314 -1 1446 LSC 0.006916 19 0 5 300 no 1.000000 4 1.000000 0.006916 1.000000 48.900000 IGS_079 igs atpB|ycf3 atpB-ycf3 68315 68505 0 191 LSC 0.000000 0 0 37 270 no 0.000000 1 0.000000 0.000000 1.000000 21.500000 ycf3 gene ycf3 ycf3 68506 69015 -1 510 LSC 0.000980 1 0 228 52 no 0.250000 2 0.500000 0.000980 1.000000 32.400000 IGS_080 igs ycf3|rps18 ycf3-rps18 69016 69117 0 102 LSC 0.009804 2 0 239 105 no 0.500000 3 0.666667 0.009804 1.000000 42.900000 rps18 gene rps18 rps18 69118 69363 -1 246 LSC 0.002033 1 0 1 3 no 0.250000 2 0.500000 0.002033 1.000000 24.900000 IGS_081 igs rps18|rpl33 rps18-rpl33 69364 69373 0 10 LSC 0.050000 1 0 140 56 yes 0.250000 2 0.500000 NA 1.000000 62.600000 rpl33 gene rpl33 rpl33 69374 69613 -1 240 LSC 0.015278 6 0 6 11 no 1.000000 4 1.000000 0.015278 1.000000 47.900000 IGS_082 igs rpl33|clpC rpl33-clpC 69614 69923 0 310 LSC 0.012366 7 0 17 122 no 1.000000 4 1.000000 0.012366 1.000000 47.400000 clpC gene clpC clpC 69924 72602 1 2679 LSC 0.007465 37 3 20 32 no 1.000000 4 1.000000 0.007473 0.998880 48.000000 IGS_083 igs clpC|trnK clpC-trnK 72603 72736 0 134 LSC 0.018657 5 0 41 102 no 1.000000 4 1.000000 0.018657 1.000000 53.600000 trnK tRNA trnK trnK 72737 72808 -1 72 LSC 0.000000 0 0 13 30 no 0.000000 1 0.000000 0.000000 1.000000 19.700000 IGS_084 igs trnK|psaC trnK-psaC 72809 72878 0 70 LSC 0.028571 3 0 85 102 no 1.000000 4 1.000000 0.028571 1.000000 62.100000 psaC gene psaC psaC 72879 73124 -1 246 LSC 0.010163 5 0 31 75 no 1.000000 4 1.000000 0.010163 1.000000 46.900000 IGS_085 igs psaC|psbA psaC-psbA 73125 73531 0 407 LSC 0.019656 15 0 44 143 no 1.000000 4 1.000000 0.019656 1.000000 56.500000 psbA gene psbA psbA 73532 74617 1 1086 LSC 0.003376 7 0 70 60 no 1.000000 4 1.000000 0.003376 1.000000 50.600000 IGS_086 igs psbA|cbbx psbA-cbbx 74618 75251 0 634 LSC 0.020267 24 9 300 33 yes 1.000000 4 1.000000 0.020267 0.985804 61.300000 cbbx gene cbbx cbbx 75252 76154 -1 903 LSC 0.004245 7 0 24 17 no 1.000000 4 1.000000 0.004245 1.000000 47.900000 IGS_087 igs cbbx|ycf12 cbbx-ycf12 76155 76507 0 353 LSC 0.016997 12 0 7 116 no 1.000000 4 1.000000 0.016997 1.000000 51.000000 ycf12 gene ycf12 ycf12 76508 76603 1 96 LSC 0.000000 0 0 45 20 no 0.000000 1 0.000000 0.000000 1.000000 20.200000 ftrB gene ftrB ftrB 76598 76945 -1 348 LSC 0.002874 2 0 135 118 no 0.250000 2 0.500000 0.002874 1.000000 35.300000 IGS_089 igs ftrB|psaI ftrB-psaI 76946 77007 0 62 LSC 0.000000 0 0 36 56 no 0.000000 1 0.000000 0.000000 1.000000 21.400000 psaI gene psaI psaI 77008 77130 1 123 LSC 0.013550 3 0 98 19 no 0.500000 3 0.666667 0.013550 1.000000 38.700000 IGS_090 igs psaI|psbJ psaI-psbJ 77131 77240 0 110 LSC 0.028788 5 0 9 12 no 1.000000 4 1.000000 0.028788 1.000000 56.800000 psbJ gene psbJ psbJ 77241 77360 -1 120 LSC 0.011111 2 0 44 47 no 0.000000 2 0.000000 0.011111 1.000000 29.100000 IGS_091 igs psbJ|psbL psbJ-psbL 77361 77433 0 73 LSC 0.006849 1 0 35 194 no 0.250000 2 0.500000 0.006849 1.000000 30.900000 psbL gene psbL psbL 77434 77550 -1 117 LSC 0.000000 0 0 25 77 no 0.000000 1 0.000000 0.000000 1.000000 20.600000 IGS_092 igs psbL|psbF psbL-psbF 77551 77561 0 11 LSC 0.000000 0 0 142 66 no 0.000000 1 0.000000 NA 1.000000 23.700000 psbF gene psbF psbF 77562 77693 -1 132 LSC 0.008838 2 0 153 86 no 0.500000 3 0.666667 0.008838 1.000000 40.400000 IGS_093 igs psbF|psbE psbF-psbE 77694 77720 0 27 LSC 0.000000 0 0 47 59 no 0.000000 1 0.000000 0.000000 1.000000 22.300000 psbE gene psbE psbE 77721 77975 -1 255 LSC 0.004575 2 0 74 38 no 0.500000 3 0.666667 0.004575 1.000000 34.000000 IGS_094 igs psbE|trnG psbE-trnG 77976 78130 0 155 LSC 0.007527 2 0 131 74 no 0.500000 3 0.666667 0.007527 1.000000 38.700000 trnG tRNA trnG trnG 78131 78201 1 71 LSC 0.000000 0 0 8 3 no 0.000000 1 0.000000 0.000000 1.000000 19.000000 IGS_095 igs trnG|ycf4 trnG-ycf4 78202 78317 0 116 LSC 0.008621 2 0 79 133 no 0.500000 3 0.666667 0.008621 1.000000 40.100000 ycf4 gene ycf4 ycf4 78318 78878 -1 561 LSC 0.005645 6 0 28 4 no 1.000000 4 1.000000 0.005645 1.000000 47.100000 IGS_096 igs ycf4|psaL ycf4-psaL 78879 79252 0 374 LSC 0.005362 4 1 45 59 no 1.000000 4 1.000000 0.005362 0.997326 46.400000 psaL gene psaL psaL 79253 79690 1 438 LSC 0.013318 11 0 96 25 no 1.000000 4 1.000000 0.013318 1.000000 51.400000 IGS_097 igs psaL|rbcR psaL-rbcR 79691 79741 0 51 LSC 0.009804 1 0 0 0 no 0.250000 2 0.500000 0.009804 1.000000 30.300000 rbcR gene rbcR rbcR 79742 80698 -1 957 LSC 0.012713 22 0 25 63 no 1.000000 4 1.000000 0.012713 1.000000 54.200000 IGS_098 igs rbcR|psbY rbcR-psbY 80699 81113 0 415 LSC 0.021687 17 0 71 35 yes 1.000000 4 1.000000 0.021687 1.000000 57.400000 psbY gene psbY psbY 81114 81227 1 114 LSC 0.008772 2 0 85 2 no 0.500000 3 0.666667 0.008772 1.000000 34.400000 IGS_099 igs psbY|rpl32 psbY-rpl32 81228 81517 0 290 LSC 0.017878 9 1 21 107 no 1.000000 4 1.000000 0.017878 0.996552 51.300000 rpl32 gene rpl32 rpl32 81518 81790 1 273 LSC 0.011600 6 0 11 6 no 1.000000 4 1.000000 0.011600 1.000000 45.900000 IGS_100 igs rpl32|trnL rpl32-trnL 81791 81868 0 78 LSC 0.014957 2 0 13 82 no 0.500000 3 0.666667 0.014957 1.000000 39.000000 trnL tRNA trnL trnL 81869 81950 1 82 LSC 0.000000 0 0 68 0 no 0.000000 1 0.000000 0.000000 1.000000 18.800000 IGS_101 igs trnL|rns trnL-rns 81951 82300 0 350 IRa 0.014286 10 0 150 300 no 1.000000 4 1.000000 0.014286 1.000000 59.800000 rns rRNA rns rns 82301 83780 1 1480 IRa 0.001014 3 0 18 72 no 0.500000 3 0.666667 0.001014 1.000000 36.400000 IGS_102 igs rns|trnI rns-trnI 83781 83905 0 125 IRa 0.018667 4 0 86 300 no 0.500000 3 0.666667 0.018667 1.000000 47.000000 trnI tRNA trnI trnI 83906 83979 1 74 IRa 0.000000 0 0 14 300 no 0.000000 1 0.000000 0.000000 1.000000 19.800000 IGS_103 igs trnI|trnA trnI-trnA 83980 83982 0 3 IRa 0.000000 0 0 88 300 no 0.000000 1 0.000000 NA 1.000000 25.400000 trnA tRNA trnA trnA 83983 84055 1 73 IRa 0.000000 0 0 91 300 no 0.000000 1 0.000000 0.000000 1.000000 25.600000 IGS_104 igs trnA|rnl trnA-rnl 84056 84111 0 56 IRa 0.000000 0 0 164 258 no 0.000000 1 0.000000 0.000000 1.000000 31.100000 rnl rRNA rnl rnl 84112 87040 1 2929 SSC 0.003699 19 0 220 161 no 1.000000 4 1.000000 0.003699 1.000000 55.300000 IGS_105 igs rnl|rrn5 rnl-rrn5 87041 87066 0 26 SSC 0.000000 0 0 300 135 no 0.000000 1 0.000000 0.000000 1.000000 28.900000 rrn5 rRNA rrn5 rrn5 87067 87182 1 116 SSC 0.000000 0 0 300 19 no 0.000000 1 0.000000 0.000000 1.000000 20.200000 IGS_106 igs rrn5|rpl21 rrn5-rpl21 87183 87267 0 85 SSC 0.007843 1 0 300 173 no 0.000000 2 0.000000 0.007843 1.000000 36.700000 rpl21 gene rpl21 rpl21 87268 87579 1 312 SSC 0.004274 2 0 65 41 no 0.000000 2 0.000000 0.004274 1.000000 24.800000 IGS_107 igs rpl21|rpl3 rpl21-rpl3 87580 87708 0 129 SSC 0.011628 3 0 93 86 no 0.500000 3 0.666667 0.011628 1.000000 42.700000 rpl3 gene rpl3 rpl3 87709 88299 1 591 SSC 0.007332 8 0 50 118 no 1.000000 4 1.000000 0.007332 1.000000 52.300000 IGS_108 igs rpl3|rpl4 rpl3-rpl4 88300 88327 0 28 SSC 0.000000 0 0 42 90 no 0.000000 1 0.000000 0.000000 1.000000 21.900000 rpl4 gene rpl4 rpl4 88328 88975 1 648 SSC 0.006173 8 0 70 131 no 1.000000 4 1.000000 0.006173 1.000000 53.300000 rpl23 gene rpl23 rpl23 88968 89270 1 303 SSC 0.005501 3 0 156 20 no 0.500000 3 0.666667 0.005501 1.000000 33.400000 IGS_110 igs rpl23|rpl2 rpl23-rpl2 89271 89310 0 40 SSC 0.012500 1 0 7 11 no 0.250000 2 0.500000 0.012500 1.000000 32.700000 rpl2 gene rpl2 rpl2 89311 90138 1 828 SSC 0.008052 13 0 19 39 no 1.000000 4 1.000000 0.008052 1.000000 50.800000 IGS_111 igs rpl2|rps19 rpl2-rps19 90139 90188 0 50 SSC 0.013333 1 0 75 32 no 0.000000 2 0.000000 0.013333 1.000000 29.600000 rps19 gene rps19 rps19 90189 90473 1 285 SSC 0.005848 3 0 10 44 no 0.500000 3 0.666667 0.005848 1.000000 32.800000 IGS_112 igs rps19|rpl22 rps19-rpl22 90474 90488 0 15 SSC 0.000000 0 0 137 29 no 0.000000 1 0.000000 NA 1.000000 20.900000 rpl22 gene rpl22 rpl22 90489 90836 1 348 SSC 0.006226 4 0 152 2 no 1.000000 4 1.000000 0.006226 1.000000 42.900000 IGS_113 igs rpl22|rps3 rpl22-rps3 90837 90882 0 46 SSC 0.019048 1 11 201 26 no 0.500000 3 0.666667 0.019048 0.760870 39.000000 rps3 gene rps3 rps3 90883 91551 1 669 SSC 0.007474 8 0 43 8 no 1.000000 4 1.000000 0.007474 1.000000 49.200000 IGS_114 igs rps3|rpl16 rps3-rpl16 91552 91573 0 22 SSC 0.022727 1 0 222 62 no 0.250000 2 0.500000 0.022727 1.000000 44.000000 rpl16 gene rpl16 rpl16 91574 91978 1 405 SSC 0.004115 3 0 13 147 no 1.000000 4 1.000000 0.004115 1.000000 43.400000 IGS_115 igs rpl16|rpl29 rpl16-rpl29 91979 91997 0 19 SSC 0.000000 0 0 168 128 no 0.000000 1 0.000000 NA 1.000000 28.300000 rpl29 gene rpl29 rpl29 91998 92189 1 192 SSC 0.007812 3 0 187 43 no 0.500000 3 0.666667 0.007812 1.000000 36.800000 IGS_116 igs rpl29|rps17 rpl29-rps17 92190 92215 0 26 SSC 0.000000 0 0 26 17 no 0.000000 1 0.000000 0.000000 1.000000 20.000000 rps17 gene rps17 rps17 92216 92470 1 255 SSC 0.007843 4 0 52 153 no 1.000000 4 1.000000 0.007843 1.000000 46.900000 IGS_117 igs rps17|rpl14 rps17-rpl14 92471 92486 0 16 SSC 0.000000 0 0 9 137 no 0.000000 1 0.000000 NA 1.000000 19.400000 rpl14 gene rpl14 rpl14 92487 92852 1 366 SSC 0.004554 3 0 25 47 no 1.000000 4 1.000000 0.004554 1.000000 43.800000 rpl24 gene rpl24 rpl24 92853 93104 1 252 SSC 0.007275 3 0 153 104 no 0.500000 3 0.666667 0.007275 1.000000 40.700000 IGS_119 igs rpl24|rpl5 rpl24-rpl5 93105 93110 0 6 SSC 0.000000 0 0 101 98 no 0.000000 1 0.000000 NA 1.000000 26.100000 rpl5 gene rpl5 rpl5 93111 93674 1 564 SSC 0.006797 7 0 107 90 no 1.000000 4 1.000000 0.006797 1.000000 54.400000 IGS_120 igs rpl5|rps8 rpl5-rps8 93675 93693 0 19 SSC 0.000000 0 0 222 71 no 0.000000 1 0.000000 NA 1.000000 24.100000 rps8 gene rps8 rps8 93694 94092 1 399 SSC 0.003778 3 2 241 95 no 0.250000 2 0.500000 0.003778 0.994987 35.700000 IGS_121 igs rps8|rpl6 rps8-rpl6 94093 94116 0 24 SSC 0.000000 0 5 6 71 no 0.250000 2 0.500000 NA 0.791667 22.700000 rpl6 gene rpl6 rpl6 94117 94653 1 537 SSC 0.005587 6 0 30 168 no 1.000000 4 1.000000 0.005587 1.000000 48.600000 IGS_122 igs rpl6|rpl18 rpl6-rpl18 94654 94659 0 6 SSC 0.000000 0 0 132 162 no 0.000000 1 0.000000 NA 1.000000 28.600000 rpl18 gene rpl18 rpl18 94660 94989 1 330 SSC 0.004545 3 0 138 42 no 1.000000 4 1.000000 0.004545 1.000000 44.500000 IGS_123 igs rpl18|rps5 rpl18-rps5 94990 95036 0 47 SSC 0.010638 1 0 108 9 no 0.250000 2 0.500000 0.010638 1.000000 31.600000 rps5 gene rps5 rps5 95037 95540 1 504 SSC 0.004299 4 0 4 48 no 1.000000 4 1.000000 0.004299 1.000000 45.000000 IGS_124 igs rps5|secY rps5-secY 95541 95591 0 51 SSC 0.009804 1 0 6 23 no 0.250000 2 0.500000 0.009804 1.000000 30.800000 secY gene secY secY 95592 96887 1 1296 SSC 0.006944 16 0 2 0 no 1.000000 4 1.000000 0.006944 1.000000 48.400000 IGS_125 igs secY|rpl36 secY-rpl36 96888 96952 0 65 SSC 0.017949 2 0 15 202 no 0.500000 3 0.666667 0.017949 1.000000 41.200000 rpl36 gene rpl36 rpl36 96953 97066 1 114 SSC 0.000000 0 0 60 88 no 0.000000 1 0.000000 0.000000 1.000000 23.200000 IGS_126 igs rpl36|rps13 rpl36-rps13 97067 97092 0 26 SSC 0.000000 0 0 174 62 no 0.000000 1 0.000000 0.000000 1.000000 23.400000 rps13 gene rps13 rps13 97093 97473 1 381 SSC 0.006999 5 0 200 204 no 0.500000 3 0.666667 0.006999 1.000000 49.600000 IGS_127 igs rps13|rps11 rps13-rps11 97474 97516 0 43 SSC 0.000000 0 0 156 161 no 0.000000 1 0.000000 0.000000 1.000000 30.400000 rps11 gene rps11 rps11 97517 97888 1 372 SSC 0.002688 2 0 199 92 no 0.500000 3 0.666667 0.002688 1.000000 38.400000 IGS_128 igs rps11|rpoA rps11-rpoA 97889 98024 0 136 SSC 0.015931 4 0 69 47 no 0.500000 3 0.666667 0.015931 1.000000 42.500000 rpoA gene rpoA rpoA 98025 99176 1 1152 SSC 0.010272 23 6 30 144 no 1.000000 4 1.000000 0.010297 1.000000 53.700000 IGS_129 igs rpoA|rpl13 rpoA-rpl13 99177 99236 0 60 SSC 0.000000 0 0 15 84 no 0.000000 1 0.000000 0.000000 1.000000 19.900000 rpl13 gene rpl13 rpl13 99237 99668 1 432 SSC 0.004630 4 0 75 113 no 0.500000 3 0.666667 0.004630 1.000000 39.700000 IGS_130 igs rpl13|rps9 rpl13-rps9 99669 99680 0 12 SSC 0.000000 0 0 242 101 no 0.000000 1 0.000000 NA 1.000000 26.300000 rps9 gene rps9 rps9 99681 100109 1 429 SSC 0.007770 6 0 254 43 no 1.000000 4 1.000000 0.007770 1.000000 48.700000 IGS_131 igs rps9|rpl31 rps9-rpl31 100110 100154 0 45 SSC 0.011111 1 0 12 300 no 0.250000 2 0.500000 0.011111 1.000000 32.100000 rpl31 gene rpl31 rpl31 100155 100373 1 219 SSC 0.000000 0 0 1 196 no 0.000000 1 0.000000 0.000000 1.000000 18.800000 IGS_132 igs rpl31|rps12 rpl31-rps12 100374 100402 0 29 SSC 0.000000 0 0 220 167 no 0.000000 1 0.000000 0.000000 1.000000 31.300000 rps12 gene rps12 rps12 100403 100777 1 375 SSC 0.005333 4 0 249 2 no 1.000000 4 1.000000 0.005333 1.000000 42.900000 IGS_133 igs rps12|rps7 rps12-rps7 100778 100802 0 25 SSC 0.020833 1 1 171 11 no 0.500000 3 0.666667 0.020833 0.960000 46.900000 rps7 gene rps7 rps7 100803 101273 1 471 SSC 0.006723 6 0 22 6 no 1.000000 4 1.000000 0.006723 1.000000 46.100000 IGS_134 igs rps7|tufA rps7-tufA 101274 101349 0 76 SSC 0.013158 2 0 3 26 no 0.500000 3 0.666667 0.013158 1.000000 37.600000 tufA gene tufA tufA 101350 102582 1 1233 SSC 0.005407 13 0 56 73 no 1.000000 4 1.000000 0.005407 1.000000 51.700000 IGS_135 igs tufA|rps10 tufA-rps10 102583 102593 0 11 SSC 0.000000 0 0 3 62 no 0.000000 1 0.000000 NA 1.000000 19.000000 rps10 gene rps10 rps10 102594 102914 1 321 SSC 0.011423 7 0 14 15 no 1.000000 4 1.000000 0.011423 1.000000 46.900000 IGS_136 igs rps10|psaE rps10-psaE 102915 102968 0 54 SSC 0.009259 1 0 11 54 no 0.250000 2 0.500000 0.009259 1.000000 30.700000 psaE gene psaE psaE 102969 103154 -1 186 SSC 0.012545 4 0 38 62 no 0.500000 3 0.666667 0.012545 1.000000 39.300000 IGS_137 igs psaE|ftsH psaE-ftsH 103155 103311 0 157 SSC 0.013800 4 0 16 98 no 0.500000 3 0.666667 0.013800 1.000000 38.700000 ftsH gene ftsH ftsH 103312 105198 1 1887 SSC 0.006801 24 0 33 6 no 1.000000 4 1.000000 0.006801 1.000000 48.000000 IGS_138 igs ftsH|psbH ftsH-psbH 105199 105288 0 90 SSC 0.038889 7 0 18 251 yes 1.000000 4 1.000000 0.038889 1.000000 66.100000 psbH gene psbH psbH 105289 105492 -1 204 SSC 0.000000 0 0 8 47 no 0.000000 1 0.000000 0.000000 1.000000 19.400000 IGS_139 igs psbH|psbN psbH-psbN 105493 105571 0 79 SSC 0.006329 1 0 212 83 no 0.250000 2 0.500000 0.006329 1.000000 34.100000 psbN gene psbN psbN 105572 105703 1 132 SSC 0.003788 1 0 31 2 no 0.250000 2 0.500000 0.003788 1.000000 26.200000 IGS_140 igs psbN|psbT psbN-psbT 105704 105757 0 54 SSC 0.046296 5 0 48 6 yes 1.000000 4 1.000000 0.046296 1.000000 70.400000 psbT gene psbT psbT 105758 105883 -1 126 SSC 0.007937 2 0 8 215 no 0.250000 2 0.500000 0.007937 1.000000 29.600000 IGS_141 igs psbT|psbB psbT-psbB 105884 105915 0 32 SSC 0.000000 0 0 111 183 no 0.000000 1 0.000000 0.000000 1.000000 27.100000 psbB gene psbB psbB 105916 107448 -1 1533 SSC 0.001740 5 0 143 1 no 1.000000 4 1.000000 0.001740 1.000000 44.900000 IGS_142 igs psbB|petF psbB-petF 107449 107624 0 176 SSC 0.002841 1 0 215 43 no 0.250000 2 0.500000 0.002841 1.000000 28.700000 petF gene petF petF 107625 107918 1 294 SSC 0.015873 9 0 174 9 yes 1.000000 4 1.000000 0.015873 1.000000 49.100000 IGS_143 igs petF|rpl12 petF-rpl12 107919 108071 0 153 SSC 0.054466 16 0 10 80 yes 1.000000 4 1.000000 0.054466 1.000000 73.200000 rpl12 gene rpl12 rpl12 108072 108464 -1 393 SSC 0.005089 4 0 40 14 no 1.000000 4 1.000000 0.005089 1.000000 44.000000 IGS_144 igs rpl12|rpl1 rpl12-rpl1 108465 108519 0 55 SSC 0.027273 3 0 99 45 no 0.500000 3 0.666667 0.027273 1.000000 50.600000 rpl1 gene rpl1 rpl1 108520 109212 -1 693 SSC 0.003848 5 0 11 25 no 0.500000 3 0.666667 0.003848 1.000000 37.800000 IGS_145 igs rpl1|rpl11 rpl1-rpl11 109213 109255 0 43 SSC 0.011628 1 0 272 168 no 0.250000 2 0.500000 0.011628 1.000000 44.200000 rpl11 gene rpl11 rpl11 109256 109681 -1 426 SSC 0.001174 1 0 17 52 no 0.250000 2 0.500000 0.001174 1.000000 28.200000 IGS_146 igs rpl11|trnW rpl11-trnW 109682 109792 0 111 SSC 0.016517 3 0 257 74 no 0.500000 3 0.666667 0.016517 1.000000 44.500000 trnW tRNA trnW trnW 109793 109865 -1 73 SSC 0.000000 0 0 30 1 no 0.000000 1 0.000000 0.000000 1.000000 18.800000 IGS_147 igs trnW|dnaB trnW-dnaB 109866 110034 0 169 SSC 0.005917 2 0 103 3 no 0.500000 3 0.666667 0.005917 1.000000 32.500000 dnaB gene dnaB dnaB 110035 111486 -1 1452 SSC 0.007117 20 0 164 18 no 1.000000 4 1.000000 0.007117 1.000000 50.000000 IGS_148 igs dnaB|rpl9 dnaB-rpl9 111487 111792 0 306 SSC 0.003813 2 0 8 18 no 0.500000 3 0.666667 0.003813 1.000000 31.400000 rpl9 gene rpl9 rpl9 111793 112260 -1 468 SSC 0.006766 6 0 183 26 no 1.000000 4 1.000000 0.006766 1.000000 47.600000 IGS_149 igs rpl9|psbW rpl9-psbW 112261 112494 0 234 SSC 0.011396 5 0 21 122 no 1.000000 4 1.000000 0.011396 1.000000 46.900000 psbW gene psbW psbW 112495 112839 1 345 SSC 0.006280 4 0 40 18 no 1.000000 4 1.000000 0.006280 1.000000 44.100000 IGS_150 igs psbW|syfB psbW-syfB 112840 112937 0 98 SSC 0.010204 2 0 157 26 no 0.500000 3 0.666667 0.010204 1.000000 37.200000 syfB gene syfB syfB 112938 115241 1 2304 SSC 0.009042 39 0 36 30 no 1.000000 4 1.000000 0.009042 1.000000 50.500000 IGS_151 igs syfB|rps1 syfB-rps1 115242 115285 0 44 SSC 0.015152 1 0 57 3 no 0.000000 2 0.000000 0.015152 1.000000 28.600000 rps1 gene rps1 rps1 115286 116080 1 795 SSC 0.009015 14 0 13 3 no 1.000000 4 1.000000 0.009015 1.000000 50.200000 IGS_152 igs rps1|ycf40 rps1-ycf40 116081 116084 0 4 SSC 0.125000 1 0 54 9 no 0.250000 2 0.500000 NA 1.000000 59.100000 ycf40 gene ycf40 ycf40 116085 116312 -1 228 SSC 0.010234 4 0 0 24 no 0.500000 3 0.666667 0.010234 1.000000 34.900000 IGS_153 igs ycf40|trnH ycf40-trnH 116313 116362 0 50 SSC 0.010000 1 0 32 77 no 0.250000 2 0.500000 0.010000 1.000000 32.800000 trnH tRNA trnH trnH 116363 116435 1 73 SSC 0.000000 0 0 25 4 no 0.000000 1 0.000000 0.000000 1.000000 19.100000 IGS_154 igs trnH|trnT trnH-trnT 116436 116516 0 81 SSC 0.037037 6 0 98 102 yes 1.000000 4 1.000000 0.037037 1.000000 70.800000 trnT tRNA trnT trnT 116517 116589 1 73 SSC 0.000000 0 0 21 29 no 0.000000 1 0.000000 0.000000 1.000000 20.300000 IGS_155 igs trnT|trnV trnT-trnV 116590 116882 0 293 SSC 0.021615 12 0 94 75 yes 1.000000 4 1.000000 0.021615 1.000000 58.000000 trnV tRNA trnV trnV 116883 116954 1 72 SSC 0.000000 0 0 18 3 no 0.000000 1 0.000000 0.000000 1.000000 19.000000 IGS_156 igs trnV|ycf35 trnV-ycf35 116955 117181 0 227 SSC 0.022761 9 0 90 77 no 1.000000 4 1.000000 0.022761 1.000000 58.500000 ycf35 gene ycf35 ycf35 117182 117580 1 399 SSC 0.012531 10 0 65 53 no 1.000000 4 1.000000 0.012531 1.000000 52.300000 IGS_157 igs ycf35|ycf24 ycf35-ycf24 117581 117860 0 280 SSC 0.008929 5 9 18 161 no 1.000000 4 1.000000 0.009132 1.000000 48.900000 ycf24 gene ycf24 ycf24 117861 119306 1 1446 SSC 0.005187 14 0 86 53 no 1.000000 4 1.000000 0.005187 1.000000 51.300000 ycf16 gene ycf16 ycf16 119303 120079 1 777 SSC 0.004719 7 0 119 17 no 1.000000 4 1.000000 0.004719 1.000000 48.300000 IGS_159 igs ycf16|trnN ycf16-trnN 120080 120346 0 267 SSC 0.014981 8 0 45 201 no 1.000000 4 1.000000 0.014981 1.000000 51.400000 trnN tRNA trnN trnN 120347 120418 1 72 SSC 0.000000 0 0 12 129 no 0.000000 1 0.000000 0.000000 1.000000 19.700000 IGS_160 igs trnN|psbD trnN-psbD 120419 120677 0 259 SSC 0.006435 3 0 84 31 no 1.000000 4 1.000000 0.006435 1.000000 44.200000 psbD gene psbD psbD 120678 121733 1 1056 SSC 0.005208 11 0 48 300 no 1.000000 4 1.000000 0.005208 1.000000 51.000000 psbC gene psbC psbC 121681 123105 1 1425 SSC 0.003977 11 0 178 55 no 1.000000 4 1.000000 0.003977 1.000000 50.600000 IGS_162 igs psbC|ycf41 psbC-ycf41 123106 123223 0 118 SSC 0.009887 2 0 51 18 no 0.500000 3 0.666667 0.009887 1.000000 36.000000 ycf41 gene ycf41 ycf41 123224 123580 -1 357 SSC 0.015326 10 9 39 116 no 1.000000 4 1.000000 0.015326 0.974790 54.300000 ycf39 gene ycf39 ycf39 123540 124499 -1 960 SSC 0.006771 13 0 46 9 no 1.000000 4 1.000000 0.006771 1.000000 49.200000 IGS_164 igs ycf39|ycf33 ycf39-ycf33 124500 124865 0 366 SSC 0.011050 8 8 32 54 no 1.000000 4 1.000000 0.011142 0.978142 51.000000 ycf33 gene ycf33 ycf33 124866 125060 1 195 SSC 0.002564 1 0 104 18 no 0.250000 2 0.500000 0.002564 1.000000 26.600000 IGS_165 igs ycf33|ilvB ycf33-ilvB 125061 125109 0 49 SSC 0.023810 2 0 140 71 no 0.500000 3 0.666667 0.023810 1.000000 49.300000 ilvB gene ilvB ilvB 125110 127278 1 2169 SSC 0.011833 47 0 22 20 no 1.000000 4 1.000000 0.011833 1.000000 51.900000 IGS_166 igs ilvB|rps4 ilvB-rps4 127279 127348 0 70 SSC 0.007143 1 0 0 69 no 0.250000 2 0.500000 0.007143 1.000000 28.400000 rps4 gene rps4 rps4 127349 127981 -1 633 SSC 0.009742 12 0 49 61 no 1.000000 4 1.000000 0.009742 1.000000 54.200000 IGS_167 igs rps4|trnR rps4-trnR 127982 128097 0 116 SSC 0.021552 4 0 143 76 no 0.500000 3 0.666667 0.021552 1.000000 47.800000 trnR tRNA trnR trnR 128098 128171 1 74 SSC 0.000000 0 0 11 2 no 0.000000 1 0.000000 0.000000 1.000000 18.900000 IGS_168 igs trnR|trnQ trnR-trnQ 128172 128196 0 25 SSC 0.020000 1 0 85 121 no 0.250000 2 0.500000 0.020000 1.000000 43.800000 trnQ tRNA trnQ trnQ 128197 128268 1 72 SSC 0.000000 0 0 22 49 no 0.000000 1 0.000000 0.000000 1.000000 20.400000 IGS_169 igs trnQ|ycf65 trnQ-ycf65 128269 128692 0 424 SSC 0.016509 13 0 94 27 no 1.000000 4 1.000000 0.016509 1.000000 53.400000 ycf65 gene ycf65 ycf65 128693 129013 -1 321 SSC 0.009346 5 0 41 56 no 0.500000 3 0.666667 0.009346 1.000000 37.800000 IGS_170 igs ycf65|rps16 ycf65-rps16 129014 129036 0 23 SSC 0.000000 0 0 63 33 no 0.000000 1 0.000000 0.000000 1.000000 21.200000 rps16 gene rps16 rps16 129037 129270 -1 234 SSC 0.011396 5 0 86 2 no 1.000000 4 1.000000 0.011396 1.000000 45.400000 IGS_171 igs rps16|ycf19 rps16-ycf19 129271 129311 0 41 SSC 0.024390 2 0 24 123 no 0.500000 3 0.666667 0.024390 1.000000 47.000000 ycf19 gene ycf19 ycf19 129312 129671 -1 360 SSC 0.005556 4 0 4 53 no 1.000000 4 1.000000 0.005556 1.000000 42.900000 IGS_172 igs ycf19|ycf17 ycf19-ycf17 129672 129909 0 238 SSC 0.012605 6 3 6 90 no 1.000000 4 1.000000 0.012727 0.995798 48.200000 ycf17 gene ycf17 ycf17 129910 130080 1 171 SSC 0.005848 2 0 68 5 no 0.500000 3 0.666667 0.005848 1.000000 32.600000 IGS_173 igs ycf17|rrn5 ycf17-rrn5 130081 162 0 167 SSC 0.009980 2 162 13 300 no 1.000000 4 1.000000 NA 0.035928 32.400000