feature_id feature_type parent_gene label_name start end strand length_bp region pi variable_sites indel_sites conserved_left_bp conserved_right_bp primer_available species_resolution unique_haplotype_count species_specific_haplotype_ratio interspecific_divergence alignment_reliability markerseek_score psbA gene psbA psbA 83 1144 -1 1062 LSC 0.003766 4 0 37 59 no 1.000000 2 1.000000 NA 1.000000 48.700000 IGS_001 igs psbA|trnK(UUU) psbA-trnK(UUU) 1145 1380 0 236 LSC 0.021645 5 5 72 300 no 1.000000 2 1.000000 NA 0.978814 57.300000 trnK(UUU)_part2 tRNA trnK(UUU) trnK(UUU) 1381 1413 -1 33 LSC 0.000000 0 0 35 300 no 0.000000 1 0.000000 NA 1.000000 21.400000 matK gene matK matK 1716 3257 -1 1542 LSC 0.005188 8 0 300 87 no 1.000000 2 1.000000 NA 1.000000 53.200000 IGS_004 igs matK|trnK(UUU) matK-trnK(UUU) 3258 3957 0 700 LSC 0.011429 8 0 297 73 no 1.000000 2 1.000000 NA 1.000000 55.800000 trnK(UUU)_part1 tRNA trnK(UUU) trnK(UUU) 3958 3994 -1 37 LSC 0.000000 0 0 158 36 no 0.000000 1 0.000000 NA 1.000000 21.400000 IGS_005 igs trnK(UUU)|rps16 trnK(UUU)-rps16 3995 4595 0 601 LSC 0.011885 7 12 195 300 yes 1.000000 2 1.000000 NA 0.980033 67.100000 rps16 gene rps16 rps16 4596 5727 -1 1132 LSC 0.004541 5 31 25 78 no 1.000000 2 1.000000 NA 0.972615 50.900000 IGS_006 igs rps16|trnQ(UUG) rps16-trnQ(UUG) 5728 7278 0 1551 LSC 0.010638 11 517 224 300 yes 1.000000 2 1.000000 NA 0.666667 61.200000 trnQ(UUG) tRNA trnQ(UUG) trnQ(UUG) 7279 7349 -1 71 LSC 0.000000 0 0 166 300 no 0.000000 1 0.000000 NA 1.000000 31.200000 IGS_007 igs trnQ(UUG)|psbK trnQ(UUG)-psbK 7350 7704 0 355 LSC 0.002817 1 0 237 254 no 1.000000 2 1.000000 NA 1.000000 55.300000 psbK gene psbK psbK 7705 7899 1 195 LSC 0.000000 0 0 35 59 no 0.000000 1 0.000000 NA 1.000000 21.400000 IGS_008 igs psbK|psbI psbK-psbI 7900 8328 0 429 LSC 0.020979 9 0 230 183 yes 1.000000 2 1.000000 NA 1.000000 66.000000 psbI gene psbI psbI 8329 8439 1 111 LSC 0.000000 0 0 80 72 no 0.000000 1 0.000000 NA 1.000000 24.100000 IGS_009 igs psbI|trnS(GCU) psbI-trnS(GCU) 8440 8559 0 120 LSC 0.008333 1 0 191 110 no 1.000000 2 1.000000 NA 1.000000 50.500000 trnS(GCU) tRNA trnS(GCU) trnS(GCU) 8560 8647 -1 88 LSC 0.000000 0 0 47 22 no 0.000000 1 0.000000 NA 1.000000 20.400000 IGS_010 igs trnS(GCU)|psbD trnS(GCU)-psbD 8648 9639 0 992 LSC 0.010081 10 0 135 300 no 1.000000 2 1.000000 NA 1.000000 59.700000 psbD gene psbD psbD 9640 10701 1 1062 LSC 0.001883 2 0 108 231 no 1.000000 2 1.000000 NA 1.000000 52.900000 psbC gene psbC psbC 10649 12070 1 1422 LSC 0.001406 2 0 300 88 no 1.000000 2 1.000000 NA 1.000000 51.200000 IGS_012 igs psbC|trnS(UGA) psbC-trnS(UGA) 12071 12216 0 146 LSC 0.006849 1 0 201 153 no 1.000000 2 1.000000 NA 1.000000 52.900000 trnS(UGA) tRNA trnS(UGA) trnS(UGA) 12217 12304 -1 88 LSC 0.000000 0 0 57 65 no 0.000000 1 0.000000 NA 1.000000 23.000000 IGS_013 igs trnS(UGA)|psbZ trnS(UGA)-psbZ 12305 12653 0 349 LSC 0.005731 2 0 145 228 no 1.000000 2 1.000000 NA 1.000000 52.700000 psbZ gene psbZ psbZ 12654 12842 1 189 LSC 0.000000 0 0 189 39 no 0.000000 1 0.000000 NA 1.000000 21.700000 IGS_014 igs psbZ|trnG(UCC) psbZ-trnG(UCC) 12843 13151 0 309 LSC 0.025641 5 114 300 141 yes 1.000000 2 1.000000 NA 0.631068 57.700000 trnG(UCC) tRNA trnG(UCC) trnG(UCC) 13152 13223 -1 72 LSC 0.000000 0 0 37 69 no 0.000000 1 0.000000 NA 1.000000 21.500000 IGS_015 igs trnG(UCC)|trnT(GGU) trnG(UCC)-trnT(GGU) 13224 16300 0 3077 LSC 0.012443 38 23 109 247 yes 1.000000 2 1.000000 NA 0.992525 56.500000 trnT(GGU) tRNA trnT(GGU) trnT(GGU) 16301 16372 -1 72 LSC 0.000000 0 0 124 175 no 0.000000 1 0.000000 NA 1.000000 28.000000 IGS_016 igs trnT(GGU)|trnE(UUC) trnT(GGU)-trnE(UUC) 16373 16881 0 509 LSC 0.020000 10 9 196 300 yes 1.000000 2 1.000000 NA 0.982318 69.700000 trnE(UUC) tRNA trnE(UUC) trnE(UUC) 16882 16954 -1 73 LSC 0.000000 0 0 288 247 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_017 igs trnE(UUC)|trnY(GUA) trnE(UUC)-trnY(GUA) 16955 17015 0 61 LSC 0.000000 0 0 300 186 no 0.000000 1 0.000000 NA 1.000000 32.700000 trnY(GUA) tRNA trnY(GUA) trnY(GUA) 17016 17099 -1 84 LSC 0.000000 0 0 300 102 no 0.000000 1 0.000000 NA 1.000000 26.400000 IGS_018 igs trnY(GUA)|trnD(GUC) trnY(GUA)-trnD(GUC) 17100 17443 0 344 LSC 0.011628 4 0 300 197 no 1.000000 2 1.000000 NA 1.000000 59.900000 trnD(GUC) tRNA trnD(GUC) trnD(GUC) 17444 17517 -1 74 LSC 0.000000 0 0 104 123 no 0.000000 1 0.000000 NA 1.000000 26.600000 IGS_019 igs trnD(GUC)|psbM trnD(GUC)-psbM 17518 18438 0 921 LSC 0.007659 7 7 178 8 no 1.000000 2 1.000000 NA 0.992400 49.500000 psbM gene psbM psbM 18439 18543 1 105 LSC 0.009524 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 58.000000 IGS_020 igs psbM|petN psbM-petN 18544 19125 0 582 LSC 0.008666 5 5 96 264 no 1.000000 2 1.000000 NA 0.991409 56.400000 petN gene petN petN 19126 19215 -1 90 LSC 0.000000 0 0 53 174 no 0.000000 1 0.000000 NA 1.000000 22.700000 IGS_021 igs petN|trnC(GCA) petN-trnC(GCA) 19216 20103 0 888 LSC 0.009009 8 0 143 178 no 1.000000 2 1.000000 NA 1.000000 59.700000 trnC(GCA) tRNA trnC(GCA) trnC(GCA) 20104 20174 -1 71 LSC 0.000000 0 0 56 107 no 0.000000 1 0.000000 NA 1.000000 22.900000 IGS_022 igs trnC(GCA)|rpoB trnC(GCA)-rpoB 20175 21309 0 1135 LSC 0.003714 4 58 127 263 no 1.000000 2 1.000000 NA 0.948899 60.200000 rpoB gene rpoB rpoB 21310 24537 1 3228 LSC 0.001243 4 9 48 300 no 1.000000 2 1.000000 NA 0.997212 44.900000 IGS_023 igs rpoB|rpoC1 rpoB-rpoC1 24538 24568 0 31 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rpoC1 gene rpoC1 rpoC1 24569 26614 1 2046 LSC 0.003421 7 0 300 33 no 1.000000 2 1.000000 NA 1.000000 47.100000 IGS_024 igs rpoC1|rpoC2 rpoC1-rpoC2 26615 26809 0 195 LSC 0.005128 1 0 300 123 no 1.000000 2 1.000000 NA 1.000000 49.700000 rpoC2 gene rpoC2 rpoC2 26810 31291 1 4482 LSC 0.007642 34 33 161 13 yes 1.000000 2 1.000000 NA 0.992637 44.400000 IGS_025 igs rpoC2|rps2 rpoC2-rps2 31292 31572 0 281 LSC 0.007117 2 0 125 36 no 1.000000 2 1.000000 NA 1.000000 44.300000 rps2 gene rps2 rps2 31573 32283 1 711 LSC 0.009845 7 0 58 194 no 1.000000 2 1.000000 NA 1.000000 53.800000 IGS_026 igs rps2|atpI rps2-atpI 32284 32556 0 273 LSC 0.011029 3 1 210 47 no 1.000000 2 1.000000 NA 0.996337 47.700000 atpI gene atpI atpI 32557 33300 1 744 LSC 0.001344 1 0 52 300 no 1.000000 2 1.000000 NA 1.000000 48.400000 IGS_027 igs atpI|atpH atpI-atpH 33301 33667 0 367 LSC 0.002740 1 2 300 266 no 1.000000 2 1.000000 NA 0.994550 56.000000 atpH gene atpH atpH 33668 33913 1 246 LSC 0.000000 0 0 58 20 no 0.000000 1 0.000000 NA 1.000000 20.200000 IGS_028 igs atpH|atpF atpH-atpF 33914 34444 0 531 LSC 0.020952 11 6 300 300 yes 1.000000 2 1.000000 NA 0.988701 70.400000 atpF gene atpF atpF 34445 35850 1 1406 LSC 0.000000 0 22 173 185 no 1.000000 2 1.000000 NA 0.984353 58.200000 IGS_029 igs atpF|atpA atpF-atpA 35851 35940 0 90 LSC 0.000000 0 0 300 95 no 0.000000 1 0.000000 NA 1.000000 25.900000 atpA gene atpA atpA 35941 37464 1 1524 LSC 0.002625 4 0 300 261 no 1.000000 2 1.000000 NA 1.000000 60.200000 IGS_030 igs atpA|trnR(UCU) atpA-trnR(UCU) 37465 37597 0 133 LSC 0.000000 0 1 205 128 no 1.000000 2 1.000000 NA 0.992481 47.800000 trnR(UCU) tRNA trnR(UCU) trnR(UCU) 37598 37669 -1 72 LSC 0.000000 0 0 300 56 no 0.000000 1 0.000000 NA 1.000000 22.900000 IGS_031 igs trnR(UCU)|trnfM(CAU) trnR(UCU)-trnfM(CAU) 37670 37817 0 148 LSC 0.006757 1 0 300 202 no 1.000000 2 1.000000 NA 1.000000 56.400000 trnfM(CAU) tRNA trnfM(CAU) trnfM(CAU) 37818 37877 -1 60 LSC 0.000000 0 0 91 142 no 0.000000 1 0.000000 NA 1.000000 25.600000 IGS_032 igs trnfM(CAU)|rps14 trnfM(CAU)-rps14 37878 38039 0 162 LSC 0.006173 1 0 151 300 no 1.000000 2 1.000000 NA 1.000000 52.400000 rps14 gene rps14 rps14 38040 38342 -1 303 LSC 0.000000 0 0 19 300 no 0.000000 1 0.000000 NA 1.000000 20.200000 IGS_033 igs rps14|psaB rps14-psaB 38343 38487 0 145 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 psaB gene psaB psaB 38488 40692 -1 2205 LSC 0.003175 7 0 300 300 no 1.000000 2 1.000000 NA 1.000000 59.100000 IGS_034 igs psaB|psaA psaB-psaA 40693 40717 0 25 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 psaA gene psaA psaA 40718 42970 -1 2253 LSC 0.002663 6 0 300 267 no 1.000000 2 1.000000 NA 1.000000 58.700000 IGS_035 igs psaA|ycf3 psaA-ycf3 42971 43598 0 628 LSC 0.004777 3 0 300 25 no 1.000000 2 1.000000 NA 1.000000 48.400000 ycf3 gene ycf3 ycf3 43599 45609 -1 2011 LSC 0.002491 5 4 221 93 no 1.000000 2 1.000000 NA 0.998011 51.300000 IGS_036 igs ycf3|trnS(GAA) ycf3-trnS(GAA) 45610 46257 0 648 LSC 0.009509 6 17 300 162 yes 1.000000 2 1.000000 NA 0.973765 63.900000 trnS(GAA) tRNA trnS(GAA) trnS(GAA) 46258 46344 -1 87 LSC 0.000000 0 0 162 75 no 0.000000 1 0.000000 NA 1.000000 24.400000 IGS_037 igs trnS(GAA)|rps4 trnS(GAA)-rps4 46345 46630 0 286 LSC 0.013825 3 69 249 178 no 1.000000 2 1.000000 NA 0.758741 57.800000 rps4 gene rps4 rps4 46631 47236 -1 606 LSC 0.004950 3 0 114 218 no 1.000000 2 1.000000 NA 1.000000 55.100000 IGS_038 igs rps4|trnT(UGU) rps4-trnT(UGU) 47237 47538 0 302 LSC 0.003356 1 4 152 174 no 1.000000 2 1.000000 NA 0.986755 52.100000 trnT(UGU) tRNA trnT(UGU) trnT(UGU) 47539 47611 -1 73 LSC 0.000000 0 0 83 101 no 0.000000 1 0.000000 NA 1.000000 25.000000 IGS_039 igs trnT(UGU)|trnL(UAA) trnT(UGU)-trnL(UAA) 47612 48259 0 648 LSC 0.006173 4 0 156 250 no 1.000000 2 1.000000 NA 1.000000 59.000000 trnL(UAA)_part2 tRNA trnL(UAA) trnL(UAA) 48260 48294 -1 35 LSC 0.000000 0 0 68 215 no 0.000000 1 0.000000 NA 1.000000 23.800000 trnL(UAA)_part1 tRNA trnL(UAA) trnL(UAA) 48835 48884 -1 50 LSC 0.020000 1 0 205 262 yes 1.000000 2 1.000000 NA 1.000000 64.000000 IGS_042 igs trnL(UAA)|trnF(GAA) trnL(UAA)-trnF(GAA) 48885 49231 0 347 LSC 0.005764 2 0 32 204 no 1.000000 2 1.000000 NA 1.000000 44.200000 trnF(GAA) tRNA trnF(GAA) trnF(GAA) 49232 49304 -1 73 LSC 0.000000 0 0 77 131 no 0.000000 1 0.000000 NA 1.000000 24.500000 IGS_043 igs trnF(GAA)|ndhJ trnF(GAA)-ndhJ 49305 49868 0 564 LSC 0.005319 3 0 150 30 no 1.000000 2 1.000000 NA 1.000000 48.300000 ndhJ gene ndhJ ndhJ 49869 50348 -1 480 LSC 0.004167 2 0 150 249 no 1.000000 2 1.000000 NA 1.000000 54.900000 IGS_044 igs ndhJ|ndhK ndhJ-ndhK 50349 50447 0 99 LSC 0.000000 0 0 103 150 no 0.000000 1 0.000000 NA 1.000000 26.500000 ndhK gene ndhK ndhK 50448 51125 -1 678 LSC 0.002950 2 0 202 300 no 1.000000 2 1.000000 NA 1.000000 60.400000 IGS_045 igs ndhK|ndhC ndhK-ndhC 51126 51178 0 53 LSC 0.000000 0 0 269 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 ndhC gene ndhC ndhC 51179 51541 -1 363 LSC 0.000000 0 0 300 194 no 0.000000 1 0.000000 NA 1.000000 34.600000 IGS_046 igs ndhC|trnM(CAU) ndhC-trnM(CAU) 51542 53425 0 1884 LSC 0.004353 8 46 300 300 no 1.000000 2 1.000000 NA 0.975584 62.800000 trnM(CAU) tRNA trnM(CAU) trnM(CAU) 53426 53494 -1 69 LSC 0.000000 0 0 87 300 no 0.000000 1 0.000000 NA 1.000000 25.300000 IGS_047 igs trnM(CAU)|atpE trnM(CAU)-atpE 53495 53606 0 112 LSC 0.000000 0 0 156 300 no 0.000000 1 0.000000 NA 1.000000 30.400000 atpE gene atpE atpE 53607 54020 -1 414 LSC 0.000000 0 0 268 300 no 0.000000 1 0.000000 NA 1.000000 36.100000 atpB gene atpB atpB 54017 55513 -1 1497 LSC 0.004008 6 0 300 12 no 1.000000 2 1.000000 NA 1.000000 47.000000 IGS_049 igs atpB|rbcL atpB-rbcL 55514 56288 0 775 LSC 0.005161 4 0 153 281 no 1.000000 2 1.000000 NA 1.000000 58.200000 rbcL gene rbcL rbcL 56289 57728 1 1440 LSC 0.006250 9 0 300 19 no 1.000000 2 1.000000 NA 1.000000 48.800000 IGS_050 igs rbcL|psaI rbcL-psaI 57729 59583 0 1855 LSC 0.008126 15 9 221 300 no 1.000000 2 1.000000 NA 0.995148 63.100000 psaI gene psaI psaI 59584 59694 1 111 LSC 0.000000 0 0 114 300 no 0.000000 1 0.000000 NA 1.000000 27.300000 IGS_051 igs psaI|ycf4 psaI-ycf4 59695 60059 0 365 LSC 0.000000 0 0 225 74 no 0.000000 1 0.000000 NA 1.000000 25.700000 ycf4 gene ycf4 ycf4 60060 60617 1 558 LSC 0.007168 4 0 300 72 no 1.000000 2 1.000000 NA 1.000000 52.400000 IGS_052 igs ycf4|cemA ycf4-cemA 60618 61016 0 399 LSC 0.045918 18 7 81 251 yes 1.000000 2 1.000000 NA 0.982456 73.600000 cemA gene cemA cemA 61017 61706 1 690 LSC 0.005797 4 0 174 300 no 1.000000 2 1.000000 NA 1.000000 60.100000 IGS_053 igs cemA|petA cemA-petA 61707 61932 0 226 LSC 0.000000 0 0 174 300 no 0.000000 1 0.000000 NA 1.000000 31.800000 petA gene petA petA 61933 62895 1 963 LSC 0.003115 3 0 300 300 no 1.000000 2 1.000000 NA 1.000000 60.500000 IGS_054 igs petA|psbJ petA-psbJ 62896 63871 0 976 LSC 0.004098 4 0 138 300 no 1.000000 2 1.000000 NA 1.000000 56.500000 psbJ gene psbJ psbJ 63872 63994 -1 123 LSC 0.000000 0 0 134 188 no 0.000000 1 0.000000 NA 1.000000 28.800000 IGS_055 igs psbJ|rpl33 psbJ-rpl33 63995 67640 0 3646 LSC 0.004428 16 33 257 299 no 1.000000 2 1.000000 NA 0.990949 58.000000 rpl33 gene rpl33 rpl33 67641 67841 1 201 LSC 0.000000 0 0 58 98 no 0.000000 1 0.000000 NA 1.000000 23.100000 IGS_056 igs rpl33|rps18 rpl33-rps18 67842 68070 0 229 LSC 0.040724 9 8 259 231 yes 1.000000 2 1.000000 NA 0.965066 79.100000 rps18 gene rps18 rps18 68071 68558 1 488 LSC 0.002049 1 0 32 267 yes 1.000000 2 1.000000 NA 1.000000 45.000000 IGS_057 igs rps18|rpl20 rps18-rpl20 68559 68779 0 221 LSC 0.000000 0 2 256 46 no 1.000000 2 1.000000 NA 0.990950 41.800000 rpl20 gene rpl20 rpl20 68780 69139 -1 360 LSC 0.005556 2 0 300 177 no 1.000000 2 1.000000 NA 1.000000 55.200000 IGS_058 igs rpl20|rps12 rpl20-rps12 69140 69835 0 696 LSC 0.002878 2 1 32 300 no 1.000000 2 1.000000 NA 0.998563 47.900000 rps12_part1 gene rps12 rps12 69836 69949 -1 114 LSC 0.000000 0 0 240 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_059 igs rps12|clpP rps12-clpP 69950 70090 0 141 LSC 0.000000 0 1 300 300 no 1.000000 2 1.000000 NA 0.992908 53.200000 clpP gene clpP clpP 70091 70741 -1 651 LSC 0.000000 0 0 300 14 no 0.000000 1 0.000000 NA 1.000000 26.100000 IGS_060 igs clpP|psbB clpP-psbB 70742 71307 0 566 LSC 0.006098 3 74 300 300 yes 1.000000 2 1.000000 NA 0.869258 64.000000 psbB gene psbB psbB 71308 72834 1 1527 LSC 0.001965 3 0 255 300 no 1.000000 2 1.000000 NA 1.000000 59.800000 IGS_061 igs psbB|psbT psbB-psbT 72835 72977 0 143 LSC 0.000000 0 0 162 300 no 0.000000 1 0.000000 NA 1.000000 30.900000 psbT gene psbT psbT 72978 73085 1 108 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_062 igs psbT|psbN psbT-psbN 73086 73133 0 48 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 psbN gene psbN psbN 73134 73265 -1 132 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_063 igs psbN|psbH psbN-psbH 73266 73368 0 103 LSC 0.000000 0 0 300 233 no 0.000000 1 0.000000 NA 1.000000 33.800000 psbH gene psbH psbH 73369 73590 1 222 LSC 0.000000 0 0 300 11 no 0.000000 1 0.000000 NA 1.000000 19.600000 IGS_064 igs psbH|petB psbH-petB 73591 74493 0 903 LSC 0.006652 6 1 300 300 no 1.000000 2 1.000000 NA 0.998893 62.700000 petB gene petB petB 74494 75192 1 699 LSC 0.001431 1 0 154 30 no 1.000000 2 1.000000 NA 1.000000 46.800000 IGS_065 igs petB|rpoA petB-rpoA 75193 76858 0 1666 LSC 0.003012 5 6 120 206 no 1.000000 2 1.000000 NA 0.996399 54.500000 rpoA gene rpoA rpoA 76859 77878 -1 1020 LSC 0.000980 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 59.300000 IGS_066 igs rpoA|rps11 rpoA-rps11 77879 77968 0 90 LSC 0.000000 0 0 300 258 no 0.000000 1 0.000000 NA 1.000000 33.800000 rps11 gene rps11 rps11 77969 78400 -1 432 LSC 0.002315 1 0 300 126 no 1.000000 2 1.000000 NA 1.000000 51.000000 IGS_067 igs rps11|rpl36 rps11-rpl36 78401 78566 0 166 LSC 0.012048 2 0 173 213 no 1.000000 2 1.000000 NA 1.000000 57.400000 rpl36 gene rpl36 rpl36 78567 78680 -1 114 LSC 0.000000 0 0 31 99 no 0.000000 1 0.000000 NA 1.000000 21.100000 IGS_068 igs rpl36|infA rpl36-infA 78681 78796 0 116 LSC 0.008621 1 0 145 0 no 1.000000 2 1.000000 NA 1.000000 42.500000 infA gene infA infA 78797 79120 -1 324 LSC 0.009259 3 0 16 33 no 1.000000 2 1.000000 NA 1.000000 44.500000 IGS_069 igs infA|rps8 infA-rps8 79121 79232 0 112 LSC 0.036364 4 2 11 78 no 1.000000 2 1.000000 NA 0.982143 60.900000 rps8 gene rps8 rps8 79233 79643 -1 411 LSC 0.007299 3 0 65 229 no 1.000000 2 1.000000 NA 1.000000 48.900000 IGS_070 igs rps8|rpl14 rps8-rpl14 79644 79806 0 163 LSC 0.000000 0 0 20 66 no 0.000000 1 0.000000 NA 1.000000 20.200000 rpl14 gene rpl14 rpl14 79807 80178 -1 372 LSC 0.005376 2 0 183 19 no 1.000000 2 1.000000 NA 1.000000 43.500000 IGS_071 igs rpl14|rpl16 rpl14-rpl16 80179 80293 0 115 LSC 0.017391 2 0 194 54 no 1.000000 2 1.000000 NA 1.000000 51.500000 rpl16 gene rpl16 rpl16 80294 81768 -1 1475 LSC 0.006780 10 0 59 118 no 1.000000 2 1.000000 NA 1.000000 52.100000 IGS_072 igs rpl16|rps3 rpl16-rps3 81769 81916 0 148 LSC 0.006944 1 4 60 171 no 1.000000 2 1.000000 NA 0.972973 48.600000 rps3 gene rps3 rps3 81917 82636 -1 720 LSC 0.002778 2 0 29 300 no 1.000000 2 1.000000 NA 1.000000 47.500000 IGS_073 igs rps3|rpl22 rps3-rpl22 82637 82694 0 58 LSC 0.000000 0 1 89 300 no 1.000000 2 1.000000 NA 0.982759 45.800000 rpl22 gene rpl22 rpl22 82695 83144 -1 450 LSC 0.002222 1 0 147 300 no 1.000000 2 1.000000 NA 1.000000 52.900000 IGS_074 igs rpl22|rps19 rpl22-rps19 83145 83223 0 79 LSC 0.000000 0 0 68 300 no 0.000000 1 0.000000 NA 1.000000 23.800000 rps19 gene rps19 rps19 83224 83526 -1 303 IRb 0.000000 0 0 147 300 no 0.000000 1 0.000000 NA 1.000000 29.800000 orf82 gene orf82 orf82 83523 83771 -1 249 IRb 0.000000 0 0 300 280 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnH(GUG) tRNA trnH(GUG) trnH(GUG) 83658 83732 -1 75 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_077 igs trnH(GUG)|rpl2 trnH(GUG)-rpl2 83733 83787 0 55 IRb 0.000000 0 0 300 264 no 0.000000 1 0.000000 NA 1.000000 33.800000 rpl2 gene rpl2 rpl2 83788 85272 -1 1485 IRb 0.000673 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 59.100000 IGS_078 igs rpl2|rpl23 rpl2-rpl23 85273 85276 0 4 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rpl23 gene rpl23 rpl23 85277 85573 -1 297 IRb 0.000000 0 0 300 259 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_079 igs rpl23|ycf2 rpl23-ycf2 85574 86094 0 521 IRb 0.001919 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 58.200000 ycf2 gene ycf2 ycf2 86095 86743 1 649 IRb 0.001541 1 0 261 298 no 1.000000 2 1.000000 NA 1.000000 59.600000 orf28 gene orf28 orf28 86143 86240 1 98 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_081 igs orf28|orf249 orf28-orf249 86241 89251 0 3011 IRb 0.001661 5 0 300 300 no 1.000000 2 1.000000 NA 1.000000 56.600000 orf249 gene orf249 orf249 89252 89444 1 193 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnL(CAA) tRNA trnL(CAA) trnL(CAA) 89410 89490 -1 81 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_083 igs trnL(CAA)|ndhB trnL(CAA)-ndhB 89491 90053 0 563 IRb 0.001776 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 59.000000 ndhB gene ndhB ndhB 90054 92298 -1 2245 IRb 0.000000 0 0 56 99 no 0.000000 1 0.000000 NA 1.000000 27.600000 IGS_084 igs ndhB|rps7 ndhB-rps7 92299 92597 0 299 IRb 0.003344 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 54.400000 rps7 gene rps7 rps7 92598 93068 -1 471 IRb 0.000000 0 0 199 300 no 0.000000 1 0.000000 NA 1.000000 37.200000 IGS_085 igs rps7|rps12 rps7-rps12 93069 93126 0 58 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rps12_part2 gene rps12 rps12 93127 93927 -1 801 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 40.000000 IGS_086 igs rps12|ycf15 rps12-ycf15 93928 94829 0 902 IRb 0.000000 0 0 300 176 no 0.000000 1 0.000000 NA 1.000000 38.200000 ycf15 gene ycf15 ycf15 94830 95020 -1 191 IRb 0.005236 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 55.500000 IGS_087 igs ycf15|trnV(GAC) ycf15-trnV(GAC) 95021 95694 0 674 IRb 0.001484 1 0 14 300 no 1.000000 2 1.000000 NA 1.000000 45.700000 trnV(GAC) tRNA trnV(GAC) trnV(GAC) 95695 95766 -1 72 IRb 0.000000 0 0 173 300 no 0.000000 1 0.000000 NA 1.000000 31.700000 IGS_088 igs trnV(GAC)|rrn16 trnV(GAC)-rrn16 95767 95996 0 230 IRb 0.000000 0 0 245 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rrn16 rRNA rrn16 rrn16 95997 97488 1 1492 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 40.000000 IGS_089 igs rrn16|trnI(GAU) rrn16-trnI(GAU) 97489 97795 0 307 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.900000 trnI(GAU)_part2 tRNA trnI(GAU) trnI(GAU) 97796 97837 -1 42 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 ycf68 gene ycf68 ycf68 97937 98817 1 881 IRb 0.000000 0 75 300 300 no 1.000000 2 1.000000 NA 0.914869 62.600000 trnI(GAU)_part1 tRNA trnI(GAU) trnI(GAU) 98784 98818 -1 35 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_093 igs trnI(GAU)|trnA(UGC) trnI(GAU)-trnA(UGC) 98819 98882 0 64 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnA(UGC)_part2 tRNA trnA(UGC) trnA(UGC) 98883 98921 -1 39 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 orf109 gene orf109 orf109 99382 99710 1 329 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 34.400000 IGS_096 igs orf109|trnA(UGC) orf109-trnA(UGC) 99711 99730 0 20 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnA(UGC)_part1 tRNA trnA(UGC) trnA(UGC) 99731 99764 -1 34 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_097 igs trnA(UGC)|rrn23 trnA(UGC)-rrn23 99765 99910 0 146 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rrn23 rRNA rrn23 rrn23 99911 102797 1 2887 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 37.100000 IGS_098 igs rrn23|rrn4.5 rrn23-rrn4.5 102798 102883 0 86 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rrn4.5 rRNA rrn4.5 rrn4.5 102884 102987 1 104 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_099 igs rrn4.5|rrn5 rrn4.5-rrn5 102988 103214 0 227 IRb 0.000000 0 0 300 210 no 0.000000 1 0.000000 NA 1.000000 33.800000 rrn5 rRNA rrn5 rrn5 103215 103335 1 121 IRb 0.000000 0 0 300 89 no 0.000000 1 0.000000 NA 1.000000 25.400000 IGS_100 igs rrn5|trnR(ACG) rrn5-trnR(ACG) 103336 103593 0 258 IRb 0.003876 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 54.700000 trnR(ACG) tRNA trnR(ACG) trnR(ACG) 103594 103667 -1 74 IRb 0.000000 0 0 168 300 no 0.000000 1 0.000000 NA 1.000000 31.400000 IGS_101 igs trnR(ACG)|trnN(GUU) trnR(ACG)-trnN(GUU) 103668 103920 0 253 IRb 0.000000 0 0 242 105 no 0.000000 1 0.000000 NA 1.000000 26.600000 trnN(GUU) tRNA trnN(GUU) trnN(GUU) 103921 103992 -1 72 IRb 0.000000 0 0 300 33 no 0.000000 1 0.000000 NA 1.000000 21.200000 IGS_102 igs trnN(GUU)|rps15 trnN(GUU)-rps15 103993 105524 0 1532 IRb 0.002710 4 56 300 300 yes 1.000000 2 1.000000 NA 0.963446 63.800000 rps15 gene rps15 rps15 105525 105797 1 273 IRb 0.000000 0 0 23 59 no 0.000000 1 0.000000 NA 1.000000 20.500000 IGS_103 igs rps15|ndhF rps15-ndhF 105798 106177 0 380 IRb 0.010526 4 0 296 27 no 1.000000 2 1.000000 NA 1.000000 47.200000 ndhF gene ndhF ndhF 106178 108382 -1 2205 SSC 0.004082 9 0 8 14 no 1.000000 2 1.000000 NA 1.000000 45.200000 IGS_104 igs ndhF|rpl32 ndhF-rpl32 108383 109289 0 907 SSC 0.015046 13 43 69 223 yes 1.000000 2 1.000000 NA 0.952591 62.100000 rpl32 gene rpl32 rpl32 109290 109469 1 180 SSC 0.000000 0 0 142 43 no 0.000000 1 0.000000 NA 1.000000 22.000000 IGS_105 igs rpl32|trnL(UAG) rpl32-trnL(UAG) 109470 110169 0 700 SSC 0.010000 7 0 300 300 yes 1.000000 2 1.000000 NA 1.000000 64.500000 trnL(UAG) tRNA trnL(UAG) trnL(UAG) 110170 110249 -1 80 SSC 0.000000 0 0 193 300 no 0.000000 1 0.000000 NA 1.000000 33.200000 IGS_106 igs trnL(UAG)|ccsA trnL(UAG)-ccsA 110250 110325 0 76 SSC 0.000000 0 0 273 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 ccsA gene ccsA ccsA 110326 111300 1 975 SSC 0.002051 2 0 300 28 no 1.000000 2 1.000000 NA 1.000000 47.000000 IGS_107 igs ccsA|ndhD ccsA-ndhD 111301 111492 0 192 SSC 0.015625 3 0 300 33 no 1.000000 2 1.000000 NA 1.000000 49.000000 ndhD gene ndhD ndhD 111493 112995 -1 1503 SSC 0.005988 9 0 30 103 no 1.000000 2 1.000000 NA 1.000000 49.400000 IGS_108 igs ndhD|psaC ndhD-psaC 112996 113114 0 119 SSC 0.008403 1 0 56 78 no 1.000000 2 1.000000 NA 1.000000 46.500000 psaC gene psaC psaC 113115 113360 -1 246 SSC 0.008130 2 0 15 273 no 1.000000 2 1.000000 NA 1.000000 43.300000 IGS_109 igs psaC|ndhE psaC-ndhE 113361 113850 0 490 SSC 0.006369 3 19 23 300 no 1.000000 2 1.000000 NA 0.961224 50.600000 ndhE gene ndhE ndhE 113851 114156 -1 306 SSC 0.000000 0 0 84 99 no 0.000000 1 0.000000 NA 1.000000 25.200000 IGS_110 igs ndhE|ndhG ndhE-ndhG 114157 114346 0 190 SSC 0.021053 4 0 300 99 no 1.000000 2 1.000000 NA 1.000000 57.000000 ndhG gene ndhG ndhG 114347 114877 -1 531 SSC 0.005650 3 0 16 195 no 1.000000 2 1.000000 NA 1.000000 46.800000 IGS_111 igs ndhG|ndhI ndhG-ndhI 114878 115124 0 247 SSC 0.012195 3 1 51 300 no 1.000000 2 1.000000 NA 0.995951 48.700000 ndhI gene ndhI ndhI 115125 115667 -1 543 SSC 0.000000 0 0 37 11 no 0.000000 1 0.000000 NA 1.000000 24.600000 IGS_112 igs ndhI|ndhA ndhI-ndhA 115668 115765 0 98 SSC 0.010204 1 0 300 189 no 1.000000 2 1.000000 NA 1.000000 57.500000 ndhA gene ndhA ndhA 115766 117882 -1 2117 SSC 0.005198 11 1 86 97 no 1.000000 2 1.000000 NA 0.999528 51.900000 IGS_113 igs ndhA|ndhH ndhA-ndhH 117883 117883 0 1 SSC 0.000000 0 0 24 96 no 0.000000 1 0.000000 NA 1.000000 20.600000 ndhH gene ndhH ndhH 117884 119065 -1 1182 SSC 0.007614 9 0 25 76 no 1.000000 2 1.000000 NA 1.000000 50.000000 IGS_114 igs ndhH|rps15 ndhH-rps15 119066 119201 0 136 IRa 0.007353 1 0 233 296 no 1.000000 2 1.000000 NA 1.000000 56.700000 rps15 gene rps15 rps15 119202 119474 -1 273 IRa 0.000000 0 0 59 23 no 0.000000 1 0.000000 NA 1.000000 20.500000 IGS_115 igs rps15|trnN(GUU) rps15-trnN(GUU) 119475 121006 0 1532 IRa 0.002710 4 56 300 300 yes 1.000000 2 1.000000 NA 0.963446 63.800000 trnN(GUU) tRNA trnN(GUU) trnN(GUU) 121007 121078 -1 72 IRa 0.000000 0 0 33 300 no 0.000000 1 0.000000 NA 1.000000 21.200000 IGS_116 igs trnN(GUU)|trnR(ACG) trnN(GUU)-trnR(ACG) 121079 121331 0 253 IRa 0.000000 0 0 105 242 no 0.000000 1 0.000000 NA 1.000000 26.600000 trnR(ACG) tRNA trnR(ACG) trnR(ACG) 121332 121405 -1 74 IRa 0.000000 0 0 300 168 no 0.000000 1 0.000000 NA 1.000000 31.400000 IGS_117 igs trnR(ACG)|rrn5 trnR(ACG)-rrn5 121406 121663 0 258 IRa 0.003876 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 54.700000 rrn5 rRNA rrn5 rrn5 121664 121784 -1 121 IRa 0.000000 0 0 89 300 no 0.000000 1 0.000000 NA 1.000000 25.400000 IGS_118 igs rrn5|rrn4.5 rrn5-rrn4.5 121785 122011 0 227 IRa 0.000000 0 0 210 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rrn4.5 rRNA rrn4.5 rrn4.5 122012 122115 -1 104 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_119 igs rrn4.5|rrn23 rrn4.5-rrn23 122116 122201 0 86 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rrn23 rRNA rrn23 rrn23 122202 125088 -1 2887 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 37.100000 IGS_120 igs rrn23|trnA(UGC) rrn23-trnA(UGC) 125089 125234 0 146 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnA(UGC)_part2 tRNA trnA(UGC) trnA(UGC) 125235 125268 -1 34 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 orf109 gene orf109 orf109 125289 125617 1 329 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 34.400000 IGS_123 igs orf109|trnA(UGC) orf109-trnA(UGC) 125618 126077 0 460 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 37.100000 trnA(UGC)_part1 tRNA trnA(UGC) trnA(UGC) 126078 126116 -1 39 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_124 igs trnA(UGC)|trnI(GAU) trnA(UGC)-trnI(GAU) 126117 126180 0 64 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnI(GAU)_part2 tRNA trnI(GAU) trnI(GAU) 126181 126215 -1 35 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 ycf68 gene ycf68 ycf68 126182 127062 -1 881 IRa 0.000000 0 75 300 300 no 1.000000 2 1.000000 NA 0.914869 62.600000 IGS_127 igs ycf68|trnI(GAU) ycf68-trnI(GAU) 127063 127161 0 99 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnI(GAU)_part1 tRNA trnI(GAU) trnI(GAU) 127162 127203 -1 42 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_128 igs trnI(GAU)|rrn16 trnI(GAU)-rrn16 127204 127510 0 307 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.900000 rrn16 rRNA rrn16 rrn16 127511 129002 -1 1492 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 40.000000 IGS_129 igs rrn16|trnV(GAC) rrn16-trnV(GAC) 129003 129232 0 230 IRa 0.000000 0 0 300 245 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnV(GAC) tRNA trnV(GAC) trnV(GAC) 129233 129304 -1 72 IRa 0.000000 0 0 300 173 no 0.000000 1 0.000000 NA 1.000000 31.700000 IGS_130 igs trnV(GAC)|ycf15 trnV(GAC)-ycf15 129305 129978 0 674 IRa 0.001484 1 0 300 14 no 1.000000 2 1.000000 NA 1.000000 45.700000 ycf15 gene ycf15 ycf15 129979 130169 1 191 IRa 0.005236 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 55.500000 IGS_131 igs ycf15|rps12 ycf15-rps12 130170 131071 0 902 IRa 0.000000 0 0 176 300 no 0.000000 1 0.000000 NA 1.000000 38.200000 rps12_part2 gene rps12 rps12 131072 131872 1 801 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 40.000000 IGS_132 igs rps12|rps7 rps12-rps7 131873 131930 0 58 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rps7 gene rps7 rps7 131931 132401 1 471 IRa 0.000000 0 0 300 199 no 0.000000 1 0.000000 NA 1.000000 37.200000 IGS_133 igs rps7|ndhB rps7-ndhB 132402 132700 0 299 IRa 0.003344 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 54.400000 ndhB gene ndhB ndhB 132701 134945 1 2245 IRa 0.000000 0 0 99 56 no 0.000000 1 0.000000 NA 1.000000 27.600000 IGS_134 igs ndhB|trnL(CAA) ndhB-trnL(CAA) 134946 135508 0 563 IRa 0.001776 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 59.000000 trnL(CAA) tRNA trnL(CAA) trnL(CAA) 135509 135589 -1 81 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 orf249 gene orf249 orf249 135555 135747 1 193 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_136 igs orf249|ycf2 orf249-ycf2 135748 138255 0 2508 IRa 0.001595 4 0 300 11 no 1.000000 2 1.000000 NA 1.000000 43.400000 ycf2 gene ycf2 ycf2 138256 138904 1 649 IRa 0.001541 1 0 298 261 no 1.000000 2 1.000000 NA 1.000000 59.600000 orf28 gene orf28 orf28 138759 138856 1 98 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_138 igs orf28|rpl23 orf28-rpl23 138857 139425 0 569 IRa 0.001757 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 59.100000 rpl23 gene rpl23 rpl23 139426 139722 1 297 IRa 0.000000 0 0 259 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_139 igs rpl23|rpl2 rpl23-rpl2 139723 139726 0 4 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rpl2 gene rpl2 rpl2 139727 141211 1 1485 IRa 0.000673 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 59.100000 IGS_140 igs rpl2|orf82 rpl2-orf82 141212 141227 0 16 IRa 0.000000 0 0 264 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 orf82 gene orf82 orf82 141228 141476 1 249 IRa 0.000000 0 0 280 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnH(GUG) tRNA trnH(GUG) trnH(GUG) 141267 141341 -1 75 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_142 igs trnH(GUG)|rps19 trnH(GUG)-rps19 141342 141472 0 131 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rps19 gene rps19 rps19 141473 141775 1 303 IRa 0.000000 0 0 300 59 no 0.000000 1 0.000000 NA 1.000000 23.200000 IGS_143 igs rps19|psbA rps19-psbA 141776 82 0 117 LSC 0.042735 5 0 300 18 no 1.000000 2 1.000000 NA 1.000000 63.400000