primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnK-UUU-rps16_p1 trnK-UUU-rps16 1 CCGATGGTATGGACGAATCC TTCCTTGAAAAAGGCGCTCA 20 20 55.0 45.0 57.9 58.3 0.0 7.6 0.393931 4372 5154 978-984 1.000000 77.7 trnK-UUU-rps16_p2 trnK-UUU-rps16 2 CGATGGTATGGACGAATCCC TTCCTTGAAAAAGGCGCTCA 20 20 55.0 45.0 57.9 58.3 0.0 7.6 0.393931 4372 5154 977-983 1.000000 77.7 trnK-UUU-rps16_p3 trnK-UUU-rps16 3 AAAGCCGAGTACTCTACCGT TTCCTTGAAAAAGGCGCTCA 20 20 50.0 45.0 58.2 58.3 20.3 7.6 0.482065 4372 5154 917-923 1.000000 77.1 trnK-UUU-rps16_p4 trnK-UUU-rps16 4 AAGCCGAGTACTCTACCGTT TTCCTTGAAAAAGGCGCTCA 20 20 50.0 45.0 58.2 58.3 20.3 7.6 0.482065 4372 5154 916-922 1.000000 77.1 trnK-UUU-rps16_p5 trnK-UUU-rps16 5 TCAGTCGTGGTCTTCCAAAC TTCCTTGAAAAAGGCGCTCA 20 20 50.0 45.0 57.8 58.3 0.0 7.6 0.547945 4372 5154 1002-1008 1.000000 76.5 atpI-atpH_p1 atpI-atpH 1 TCCCTGTCATGTTCCTTGGA ATAACGGAAGCGGCAGAAAT 20 20 50.0 45.0 58.3 58.0 0.0 1.4 0.297359 24573 25680 1240-1252 0.962963 77.6 atpI-atpH_p2 atpI-atpH 2 TCCCTGTCATGTTCCTTGGA TACCTTGACCAACTCCAGGT 20 20 50.0 50.0 58.3 57.9 0.0 0.0 0.371251 24573 25680 1296-1308 0.962963 76.9 atpI-atpH_p3 atpI-atpH 3 TCCCTGTCATGTTCCTTGGA AGCCAATCCAGCAGCAATAA 20 20 50.0 45.0 58.3 57.9 0.0 0.0 0.407418 24573 25680 1256-1268 0.962963 76.7 atpI-atpH_p4 atpI-atpH 4 TCCCTGTCATGTTCCTTGGA AATAACGGAAGCGGCAGAAA 20 20 50.0 45.0 58.3 58.2 0.0 1.4 0.442898 24573 25680 1241-1253 0.962963 76.4 atpI-atpH_p5 atpI-atpH 5 TCCCTGTCATGTTCCTTGGA GCAGTACCTTGACCAACTCC 20 20 50.0 55.0 58.3 58.2 0.0 0.0 0.449288 24573 25680 1300-1312 0.962963 76.3 trnG-UCC-psbD_p1 trnG-UCC-psbD 1 AATCAAACCGAAAGACCCCT GAAACGGTCCCTACGTAACC 20 20 45.0 55.0 57.0 58.0 0.0 5.0 0.975609 30360 31992 1769-1796 1.000000 74.4 trnG-UCC-psbD_p2 trnG-UCC-psbD 2 ATCAAACCGAAAGACCCCTT GAAACGGTCCCTACGTAACC 20 20 45.0 55.0 57.0 58.0 0.0 5.0 0.975609 30360 31992 1768-1795 1.000000 74.4 trnG-UCC-psbD_p3 trnG-UCC-psbD 3 GAATCAAACCGAAAGACCCCT GAAACGGTCCCTACGTAACC 21 20 47.6 55.0 58.2 58.0 0.0 5.0 1.212053 30360 31992 1770-1797 1.000000 72.5 trnG-UCC-psbD_p4 trnG-UCC-psbD 4 AATCAAACCGAAAGACCCCT ACAAAAACGAAACGGTCCCT 20 20 45.0 45.0 57.0 58.2 0.0 0.0 1.217970 30360 31992 1777-1804 1.000000 72.5 trnG-UCC-psbD_p5 trnG-UCC-psbD 5 ATCAAACCGAAAGACCCCTT ACAAAAACGAAACGGTCCCT 20 20 45.0 45.0 57.0 58.2 0.0 0.0 1.217970 30360 31992 1776-1803 1.000000 72.5 trnS-UGA-psbZ_p1 trnS-UGA-psbZ 1 CAACCACTCAGCCATCTCTC CCAACCATCAGGAGAAGCAA 20 20 55.0 50.0 58.0 57.8 0.0 0.0 0.226377 34742 35078 455-459 1.000000 79.4 trnS-UGA-psbZ_p2 trnS-UGA-psbZ 2 CAACCACTCAGCCATCTCTC GACCAACCATCAGGAGAAGC 20 20 55.0 55.0 58.0 58.3 0.0 0.0 0.277359 34742 35078 457-461 1.000000 79.0 trnS-UGA-psbZ_p3 trnS-UGA-psbZ 3 TCAACCACTCAGCCATCTCT CCAACCATCAGGAGAAGCAA 20 20 50.0 50.0 58.4 57.8 0.0 0.0 0.555701 34742 35078 456-460 1.000000 76.8 trnS-UGA-psbZ_p4 trnS-UGA-psbZ 4 TCAACCACTCAGCCATCTCT GACCAACCATCAGGAGAAGC 20 20 50.0 55.0 58.4 58.3 0.0 0.0 0.606683 34742 35078 458-462 1.000000 76.4 trnS-UGA-psbZ_p5 trnS-UGA-psbZ 5 TTCAACCACTCAGCCATCTC CCAACCATCAGGAGAAGCAA 20 20 50.0 50.0 57.5 57.8 0.0 0.0 0.684588 34742 35078 457-461 1.000000 75.7 psaA-ycf3_p1 psaA-ycf3 1 AGAAATGACCCGGTTTAGCC AGCCGCTGAGTATTGGAAAC 20 20 50.0 50.0 57.9 58.3 0.0 0.0 0.385211 41037 41800 953-957 1.000000 78.0 psaA-ycf3_p2 psaA-ycf3 2 AGAAATGACCCGGTTTAGCC CAAGCCGCTGAGTATTGGAA 20 20 50.0 50.0 57.9 58.3 0.0 0.0 0.386439 41037 41800 955-959 1.000000 78.0 psaA-ycf3_p3 psaA-ycf3 3 CCCATGCCTCGAATGAAGTT AGCCGCTGAGTATTGGAAAC 20 20 50.0 50.0 58.2 58.3 0.0 0.0 0.505754 41037 41800 935-939 1.000000 77.1 psaA-ycf3_p4 psaA-ycf3 4 CCCATGCCTCGAATGAAGTT CAAGCCGCTGAGTATTGGAA 20 20 50.0 50.0 58.2 58.3 0.0 0.0 0.506982 41037 41800 937-941 1.000000 77.1 psaA-ycf3_p5 psaA-ycf3 5 GTTTAGCCCATGCCTCGAAT AGCCGCTGAGTATTGGAAAC 20 20 50.0 50.0 58.3 58.3 0.0 0.0 0.580596 41037 41800 941-945 1.000000 76.5 ycf3_p1 ycf3 1 TGATGGGGCCAACAAACAAT TCCCGCGAGAAGTAATGAGA 20 20 45.0 50.0 58.3 58.2 4.4 8.2 0.514002 41801 43740 2098-2106 1.000000 76.5 ycf3_p2 ycf3 2 TGATGGGGCCAACAAACAAT GGATCATTTTCCCGCGAGAA 20 20 45.0 50.0 58.3 58.3 4.4 8.2 0.609243 41801 43740 2107-2115 1.000000 75.8 ycf3_p3 ycf3 3 TGATGGGGCCAACAAACAAT ATCATTTTCCCGCGAGAAGT 20 20 45.0 45.0 58.3 57.6 4.4 8.2 0.676190 41801 43740 2105-2113 1.000000 75.2 ycf3_p4 ycf3 4 TGATGGGGCCAACAAACAAT CCCGCGAGAAGTAATGAGAA 20 20 45.0 50.0 58.3 57.4 4.4 8.2 0.852144 41801 43740 2097-2105 1.000000 73.8 ycf3_p5 ycf3 5 TGATGGGGCCAACAAACAAT TTCCCGCGAGAAGTAATGAG 20 20 45.0 50.0 58.3 57.4 4.4 8.2 0.852144 41801 43740 2099-2107 1.000000 73.8 trnT-UGU-trnL-UAA_p1 trnT-UGU-trnL-UAA 1 GCGATGCTCTAACCTCTGAG CCGTAGCGTCTACCGATTTC 20 20 55.0 55.0 57.9 58.2 0.0 10.2 0.381189 46073 46620 607-615 1.000000 78.4 trnT-UGU-trnL-UAA_p2 trnT-UGU-trnL-UAA 2 GGAATCGAACCGATGACCAT CCGTAGCGTCTACCGATTTC 20 20 50.0 55.0 57.8 58.2 15.5 10.2 0.488942 46073 46620 639-647 1.000000 77.5 trnT-UGU-trnL-UAA_p3 trnT-UGU-trnL-UAA 3 GCGATGCTCTAACCTCTGAG CGTCTACCGATTTCGCCATA 20 20 55.0 50.0 57.9 57.6 0.0 0.0 0.543526 46073 46620 601-609 1.000000 77.1 trnT-UGU-trnL-UAA_p4 trnT-UGU-trnL-UAA 4 GGAATCGAACCGATGACCAT CGTCTACCGATTTCGCCATA 20 20 50.0 50.0 57.8 57.6 15.5 0.0 0.651279 46073 46620 633-641 1.000000 76.2 trnT-UGU-trnL-UAA_p5 trnT-UGU-trnL-UAA 5 GCGATGCTCTAACCTCTGAG CGTAGCGTCTACCGATTTCG 20 20 55.0 55.0 57.9 58.6 0.0 10.2 0.749620 46073 46620 606-614 1.000000 75.4 ndhC-trnV-UAC_p1 ndhC-trnV-UAC 1 TCCTTTGCTACTCGGAGCTA GAGAAGGTCTACGGTTCGAG 20 20 50.0 55.0 57.9 57.2 4.6 0.0 0.968198 49666 50854 1334-1343 1.000000 73.0 ndhC-trnV-UAC_p2 ndhC-trnV-UAC 2 TCCTTTGCTACTCGGAGCTA CGAGAAGGTCTACGGTTCGA 20 20 50.0 55.0 57.9 58.9 4.6 0.0 1.057432 49666 50854 1335-1344 1.000000 72.3 ndhC-trnV-UAC_p3 ndhC-trnV-UAC 3 ACTCGGAGCTAAAAATCCCG GAGAAGGTCTACGGTTCGAG 20 20 50.0 55.0 57.7 57.2 4.6 0.0 1.139998 49666 50854 1325-1334 1.000000 71.7 ndhC-trnV-UAC_p4 ndhC-trnV-UAC 4 TTCTCCGGTCCTTTGCTACT GAGAAGGTCTACGGTTCGAG 20 20 50.0 55.0 58.4 57.2 0.0 0.0 1.187958 49666 50854 1342-1351 1.000000 71.3 ndhC-trnV-UAC_p5 ndhC-trnV-UAC 5 ACTCGGAGCTAAAAATCCCG CGAGAAGGTCTACGGTTCGA 20 20 50.0 55.0 57.7 58.9 4.6 0.0 1.229233 49666 50854 1326-1335 1.000000 70.9 rbcL_p1 rbcL 1 TCATGAGTTGTAGGGAGGGA TGGGCCGAGTTTCATTGAAA 20 20 50.0 45.0 57.1 58.0 0.0 7.7 0.952221 54584 56041 1518-1521 1.000000 73.2 rbcL_p2 rbcL 2 TCATGAGTTGTAGGGAGGGA TTGGGCCGAGTTTCATTGAA 20 20 50.0 45.0 57.1 58.0 0.0 0.0 0.952221 54584 56041 1519-1522 1.000000 73.2 rbcL_p3 rbcL 3 ACGCCTAATTCATGTCGAGT TGGGCCGAGTTTCATTGAAA 20 20 45.0 45.0 57.0 58.0 0.0 7.7 0.973233 54584 56041 1566-1569 1.000000 73.0 rbcL_p4 rbcL 4 ACGCCTAATTCATGTCGAGT TTGGGCCGAGTTTCATTGAA 20 20 45.0 45.0 57.0 58.0 0.0 0.0 0.973233 54584 56041 1567-1570 1.000000 73.0 rbcL_p5 rbcL 5 TCATGAGTTGTAGGGAGGGA ATTGGGCCGAGTTTCATTGA 20 20 50.0 45.0 57.1 57.8 0.0 0.0 1.154890 54584 56041 1520-1523 1.000000 71.5 accD-psaI_p1 accD-psaI 1 TCCAGAAGGGCTTATTCGATC TTGCGATTGCCGGAAATACT 21 20 47.6 45.0 57.2 58.3 0.0 8.0 2.008062 58047 58895 1011-1027 1.000000 66.2 accD-psaI_p2 accD-psaI 2 CCAGAAGGGCTTATTCGATCT TTGCGATTGCCGGAAATACT 21 20 47.6 45.0 57.2 58.3 0.0 8.0 2.015348 58047 58895 1010-1026 1.000000 66.2 accD-psaI_p3 accD-psaI 3 TTCCAGAAGGGCTTATTCGA TTGCGATTGCCGGAAATACT 20 20 45.0 45.0 56.2 58.3 0.0 8.0 2.015357 58047 58895 1012-1028 1.000000 66.2 accD-psaI_p4 accD-psaI 4 TCCAGAAGGGCTTATTCGATC AGGCCTACTAAAGGGACCAA 21 20 47.6 50.0 57.2 57.6 0.0 1.3 2.107555 58047 58895 991-1007 1.000000 65.5 accD-psaI_p5 accD-psaI 5 CCAGAAGGGCTTATTCGATCT AGGCCTACTAAAGGGACCAA 21 20 47.6 50.0 57.2 57.6 0.0 1.3 2.114841 58047 58895 990-1006 1.000000 65.4 ycf4-cemA_p1 ycf4-cemA 1 GAGCCATTCCATTGACTCGT GAGAAATCCACCAGGGCAAA 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.106483 59973 60453 639-661 1.000000 82.1 ycf4-cemA_p2 ycf4-cemA 2 TTGGCCTATTTCTTGCGTGT GAGAAATCCACCAGGGCAAA 20 20 45.0 50.0 58.1 58.1 3.3 0.0 0.172357 59973 60453 571-593 1.000000 81.9 ycf4-cemA_p3 ycf4-cemA 3 CTCCACGGGAAATGGAACAA GAGAAATCCACCAGGGCAAA 20 20 50.0 50.0 58.1 58.1 0.0 0.0 0.172357 59973 60453 603-625 1.000000 81.7 ycf4-cemA_p4 ycf4-cemA 4 AAAAAGCTGCTGAATTGGCC GAGAAATCCACCAGGGCAAA 20 20 45.0 50.0 57.8 58.1 1.4 0.0 0.251008 59973 60453 585-607 1.000000 81.2 ycf4-cemA_p5 ycf4-cemA 5 AAAGCTGCTGAATTGGCCTA GAGAAATCCACCAGGGCAAA 20 20 45.0 50.0 57.8 58.1 1.4 0.0 0.297297 59973 60453 583-605 1.000000 80.8 petA-psbJ_p1 petA-psbJ 1 ACGTGTACAAGGCCTTTTGT ATTCCGGATTGGGTTCATCC 20 20 45.0 50.0 58.0 57.6 17.6 4.1 0.411974 62327 63090 901-908 1.000000 77.7 petA-psbJ_p2 petA-psbJ 2 GGCCTTTTGTTCTTCTTCGC ATTCCGGATTGGGTTCATCC 20 20 50.0 50.0 57.9 57.6 0.0 4.1 0.416851 62327 63090 891-898 1.000000 77.7 petA-psbJ_p3 petA-psbJ 3 ACGTGTACAAGGCCTTTTGT TGTGATCGGTTTAGTAGGCG 20 20 45.0 50.0 58.0 57.4 17.6 0.0 0.619192 62327 63090 939-946 1.000000 76.0 petA-psbJ_p4 petA-psbJ 4 ACGTGTACAAGGCCTTTTGT GTGATCGGTTTAGTAGGCGT 20 20 45.0 50.0 58.0 57.4 17.6 0.0 0.620943 62327 63090 938-945 1.000000 76.0 petA-psbJ_p5 petA-psbJ 5 GGCCTTTTGTTCTTCTTCGC TGTGATCGGTTTAGTAGGCG 20 20 50.0 50.0 57.9 57.4 0.0 0.0 0.624069 62327 63090 929-936 1.000000 76.0 rpl16_p1 rpl16 1 CGCACCAAAAACTCGAGTTC GTCGAGGGAATTGCACGTAT 20 20 50.0 50.0 58.0 58.1 29.8 13.2 0.082785 80462 81843 2433-2444 1.000000 79.8 rpl16_p2 rpl16 2 TCGACGATTGCTAGCTCCTA GTCGAGGGAATTGCACGTAT 20 20 50.0 50.0 58.0 58.1 17.2 13.2 0.100895 80462 81843 2223-2234 1.000000 79.7 rpl16_p3 rpl16 3 GCGTCTTTGATCACAGCAAC GTCGAGGGAATTGCACGTAT 20 20 50.0 50.0 58.0 58.1 3.9 13.2 0.108306 80462 81843 2267-2278 1.000000 79.7 rpl16_p4 rpl16 4 CGCACCAAAAACTCGAGTTC GCAAATTGCAGGACGTATCG 20 20 50.0 50.0 58.0 57.9 29.8 13.7 0.109869 80462 81843 2116-2127 1.000000 79.6 rpl16_p5 rpl16 5 ACACATCAATTCTCGAGCCC GTCGAGGGAATTGCACGTAT 20 20 50.0 50.0 58.0 58.1 7.8 13.2 0.093906 80462 81843 2193-2204 0.962963 78.2 ycf1_p1 ycf1 1 AATCGCCTCATGTCGAATCC TTGTTTTGAATTTGATGGACT 20 21 50.0 28.6 58.1 52.1 10.3 0.0 7.041266 111804 111923 210-210 1.000000 41.1 ycf1_p2 ycf1 2 AATCGCCTCATGTCGAATCC ATTGTTTTGAATTTGATGGACT 20 22 50.0 27.3 58.1 52.8 10.3 0.0 7.346232 111804 111923 211-211 1.000000 41.1 ycf1_p3 ycf1 3 AATCGCCTCATGTCGAATCC TGTTTTGAATTTGATGGACTAA 20 22 50.0 27.3 58.1 52.2 10.3 0.0 7.929949 111804 111923 209-209 1.000000 41.1 ycf1_p4 ycf1 4 AATCGCCTCATGTCGAATCC TTGTTTTGAATTTGATGGACTA 20 22 50.0 27.3 58.1 52.2 10.3 0.0 7.929949 111804 111923 210-210 1.000000 41.1 ycf1_p5 ycf1 5 AATCGCCTCATGTCGAATCC TGTTTTGAATTTGATGGACTAAA 20 23 50.0 26.1 58.1 53.1 10.3 0.0 8.053133 111804 111923 209-209 1.000000 41.1 ndhD_p1 ndhD 1 TTATGGCATGAAACAACGCG TTTCATTAGTCAACCACTCTT 20 21 45.0 33.3 57.7 52.7 11.0 0.0 6.571097 119327 120895 1715-1717 0.962963 38.8 ndhD_p2 ndhD 2 TTATGGCATGAAACAACGCG TTTTCATTAGTCAACCACTCT 20 21 45.0 33.3 57.7 52.7 11.0 0.0 6.571097 119327 120895 1716-1718 0.962963 38.8 ndhD_p3 ndhD 3 TTATGGCATGAAACAACGCG AGTCAACCACTCTTAAAAATGA 20 22 45.0 31.8 57.7 53.6 11.0 0.0 6.674841 119327 120895 1708-1710 0.962963 38.8 ndhD_p4 ndhD 4 TTATGGCATGAAACAACGCG TTTTCATTAGTCAACCACTCTT 20 22 45.0 31.8 57.7 53.6 11.0 0.0 6.674841 119327 120895 1716-1718 0.962963 38.8 ndhD_p5 ndhD 5 TTATGGCATGAAACAACGCG TTTTTCATTAGTCAACCACTCT 20 22 45.0 31.8 57.7 53.6 11.0 0.0 6.674841 119327 120895 1717-1719 0.962963 38.8 trnL-UAG-rpl32_p1 trnL-UAG-rpl32 1 AGCGTGTCTACCGATTTCAC GGCAGCGTTAAAAGCTTTGT 20 20 50.0 45.0 58.0 57.9 0.0 13.5 0.142032 122296 122842 663-682 1.000000 81.4 trnL-UAG-rpl32_p2 trnL-UAG-rpl32 2 CAGCGTGTCTACCGATTTCA GGCAGCGTTAAAAGCTTTGT 20 20 50.0 45.0 58.0 57.9 0.0 13.5 0.143402 122296 122842 664-683 1.000000 81.4 trnL-UAG-rpl32_p3 trnL-UAG-rpl32 3 AGCGTGTCTACCGATTTCAC AAAGGATATTGGGCAGCGTT 20 20 50.0 45.0 58.0 57.9 0.0 0.0 0.151706 122296 122842 674-693 1.000000 81.3 trnL-UAG-rpl32_p4 trnL-UAG-rpl32 4 CAGCGTGTCTACCGATTTCA AAAGGATATTGGGCAGCGTT 20 20 50.0 45.0 58.0 57.9 0.0 0.0 0.153076 122296 122842 675-694 1.000000 81.3 trnL-UAG-rpl32_p5 trnL-UAG-rpl32 5 TCCTAAGAGCAGCGTGTCTA GGCAGCGTTAAAAGCTTTGT 20 20 50.0 45.0 57.9 57.9 0.0 13.5 0.258478 122296 122842 673-692 1.000000 80.4 rpl32-ndhF_p1 rpl32-ndhF 1 ACAAAGCTTTTAACGCTGCC GTTGCCGTCGGAAAAAGAAG 20 20 45.0 50.0 57.9 58.0 9.5 17.5 0.166615 123008 124024 921-1212 1.000000 83.7 rpl32-ndhF_p2 rpl32-ndhF 2 AACGCTGCCCAATATCCTTT GTTGCCGTCGGAAAAAGAAG 20 20 45.0 50.0 57.9 58.0 0.0 17.5 0.176290 123008 124024 910-1201 1.000000 83.7 rpl32-ndhF_p3 rpl32-ndhF 3 ACAAAGCTTTTAACGCTGCC TGCCGTCGGAAAAAGAAGAA 20 20 45.0 45.0 57.9 58.0 9.5 17.5 0.177905 123008 124024 919-1210 1.000000 83.6 rpl32-ndhF_p4 rpl32-ndhF 4 ACAAAGCTTTTAACGCTGCC TTGCCGTCGGAAAAAGAAGA 20 20 45.0 45.0 57.9 58.0 9.5 17.5 0.177905 123008 124024 920-1211 1.000000 83.6 rpl32-ndhF_p5 rpl32-ndhF 5 AACGCTGCCCAATATCCTTT TGCCGTCGGAAAAAGAAGAA 20 20 45.0 45.0 57.9 58.0 0.0 17.5 0.187579 123008 124024 908-1199 1.000000 83.6