feature_id feature_type parent_gene label_name start end strand length_bp region pi variable_sites indel_sites conserved_left_bp conserved_right_bp primer_available species_resolution unique_haplotype_count species_specific_haplotype_ratio interspecific_divergence alignment_reliability markerseek_score rbcL gene rbcL rbcL 1 1428 1 1428 Genome 0.002023 7 0 44 112 no 0.222222 5 0.400000 0.002023 1.000000 34.000000 IGS_001 igs rbcL|accD rbcL-accD 1429 1770 0 342 Genome 0.011139 10 37 300 42 no 0.333333 6 0.500000 0.011551 0.941520 41.600000 accD gene accD accD 1771 4539 1 2769 Genome 0.018855 139 158 25 13 yes 0.777778 8 0.875000 0.018996 0.983388 58.100000 IGS_002 igs accD|rpl23 accD-rpl23 4540 5416 0 877 Genome 0.020554 50 87 2 71 yes 0.777778 8 0.875000 0.019471 1.000000 61.600000 rpl23 gene rpl23 rpl23 5417 5707 1 291 Genome 0.007064 5 0 30 79 no 0.000000 4 0.000000 0.007064 1.000000 26.300000 IGS_003 igs rpl23|rpl2 rpl23-rpl2 5708 5728 0 21 Genome 0.000000 0 0 61 58 no 0.000000 1 0.000000 0.000000 1.000000 23.100000 rpl2 gene rpl2 rpl2 5729 7205 1 1477 Genome 0.003863 16 20 82 19 no 0.666667 7 0.857143 0.003824 1.000000 43.600000 IGS_004 igs rpl2|rps19 rpl2-rps19 7206 7264 0 59 Genome 0.003766 1 0 300 56 no 0.111111 2 0.500000 0.003766 1.000000 28.800000 rps19 gene rps19 rps19 7265 7558 1 294 Genome 0.008503 7 0 39 17 no 0.444444 6 0.666667 0.008503 1.000000 35.200000 IGS_005 igs rps19|rpl22 rps19-rpl22 7559 7674 0 116 Genome 0.003352 1 9 3 24 no 0.444444 6 0.666667 0.003440 1.000000 35.600000 rpl22 gene rpl22 rpl22 7675 8100 1 426 Genome 0.002869 4 0 98 66 no 0.333333 5 0.600000 0.002869 1.000000 35.000000 IGS_006 igs rpl22|rps3 rpl22-rps3 8101 8196 0 96 Genome 0.004051 1 0 21 207 no 0.000000 2 0.000000 0.004051 1.000000 23.400000 rps3 gene rps3 rps3 8197 8871 1 675 Genome 0.008807 16 0 29 18 no 0.777778 8 0.875000 0.008807 1.000000 47.900000 IGS_007 igs rps3|rpl16 rps3-rpl16 8872 8962 0 91 Genome 0.004274 1 0 39 35 no 0.000000 2 0.000000 0.004274 1.000000 24.700000 rpl16 gene rpl16 rpl16 8963 10201 1 1239 Genome 0.002242 8 0 72 259 no 0.444444 6 0.666667 0.002242 1.000000 40.500000 IGS_008 igs rpl16|rpl14 rpl16-rpl14 10202 10292 0 91 Genome 0.000000 0 0 84 168 no 0.000000 1 0.000000 0.000000 1.000000 25.100000 rpl14 gene rpl14 rpl14 10293 10661 1 369 Genome 0.001656 2 0 175 50 no 0.111111 3 0.333333 0.001656 1.000000 27.400000 IGS_009 igs rpl14|rps8 rpl14-rps8 10662 10763 0 102 Genome 0.011438 3 0 42 80 no 0.222222 4 0.500000 0.011438 1.000000 34.900000 rps8 gene rps8 rps8 10764 11162 1 399 Genome 0.001532 2 0 5 25 no 0.222222 3 0.666667 0.001532 1.000000 26.700000 IGS_010 igs rps8|infA rps8-infA 11163 11492 0 330 Genome 0.007071 9 7 187 8 no 0.666667 7 0.857143 0.007157 0.996970 41.500000 infA gene infA infA 11493 11750 1 258 Genome 0.003015 2 0 30 10 no 0.111111 3 0.333333 0.003015 1.000000 23.900000 IGS_011 igs infA|rpl36 infA-rpl36 11751 11785 0 35 Genome 0.017460 2 0 213 115 no 0.111111 3 0.333333 0.017460 1.000000 44.500000 rpl36 gene rpl36 rpl36 11786 11899 1 114 Genome 0.000000 0 0 19 1 no 0.000000 1 0.000000 0.000000 1.000000 18.800000 IGS_012 igs rpl36|rps11 rpl36-rps11 11900 12356 0 457 Genome 0.005410 6 26 133 49 no 0.777778 8 0.875000 0.005357 1.000000 50.400000 rps11 gene rps11 rps11 12357 12494 1 138 Genome 0.009259 3 0 248 9 no 0.222222 4 0.500000 0.009259 1.000000 30.500000 IGS_013 igs rps11|rpoA rps11-rpoA 12495 12550 0 56 Genome 0.006944 1 0 80 51 no 0.000000 2 0.000000 0.006944 1.000000 27.900000 rpoA gene rpoA rpoA 12551 13555 1 1005 Genome 0.003261 10 0 46 45 no 0.444444 6 0.666667 0.003261 1.000000 39.400000 IGS_014 igs rpoA|petD rpoA-petD 13556 13792 0 237 Genome 0.019305 12 17 6 9 no 0.666667 7 0.857143 0.018847 0.995781 52.600000 petD gene petD petD 13793 14947 -1 1155 Genome 0.002982 9 0 97 40 no 0.444444 6 0.666667 0.002982 1.000000 38.600000 IGS_015 igs petD|petB petD-petB 14948 15108 0 161 Genome 0.003796 2 1 248 300 no 0.111111 4 0.250000 0.003815 1.000000 39.800000 petB gene petB petB 15109 16505 -1 1397 Genome 0.002466 11 5 70 60 no 0.555556 7 0.714286 0.002471 1.000000 42.400000 IGS_016 igs petB|psbH petB-psbH 16506 16650 0 145 Genome 0.010728 4 1 18 198 no 0.222222 5 0.400000 0.010752 1.000000 33.400000 psbH gene psbH psbH 16651 16878 -1 228 Genome 0.000975 1 0 7 25 no 0.111111 2 0.500000 0.000975 1.000000 22.300000 IGS_017 igs psbH|psbN psbH-psbN 16879 16955 0 77 Genome 0.011544 2 0 29 169 no 0.111111 3 0.333333 0.011544 1.000000 31.400000 psbN gene psbN psbN 16956 17087 1 132 Genome 0.000000 0 0 2 37 no 0.000000 1 0.000000 0.000000 1.000000 18.900000 IGS_018 igs psbN|psbT psbN-psbT 17088 17181 0 94 Genome 0.010638 3 0 134 125 no 0.111111 3 0.333333 0.010638 1.000000 39.000000 psbT gene psbT psbT 17182 17289 -1 108 Genome 0.000000 0 0 38 17 no 0.000000 1 0.000000 0.000000 1.000000 20.000000 IGS_019 igs psbT|psbB psbT-psbB 17290 17422 0 133 Genome 0.009190 4 0 146 8 no 0.333333 5 0.600000 0.009190 1.000000 33.500000 psbB gene psbB psbB 17423 18949 -1 1527 Genome 0.001201 6 0 12 110 no 0.555556 6 0.833333 0.001201 1.000000 37.300000 IGS_020 igs psbB|psaI psbB-psaI 18950 19309 0 360 Genome 0.005644 4 5 300 5 no 0.000000 4 0.000000 0.005117 1.000000 25.900000 psaI gene psaI psaI 19310 19420 1 111 Genome 0.002002 1 0 9 43 no 0.111111 2 0.500000 0.002002 1.000000 23.500000 IGS_021 igs psaI|ycf4 psaI-ycf4 19421 19728 0 308 Genome 0.003968 4 0 105 34 no 0.222222 4 0.500000 0.003968 1.000000 29.000000 ycf4 gene ycf4 ycf4 19729 20283 1 555 Genome 0.002302 5 0 20 43 no 0.444444 5 0.800000 0.002302 1.000000 36.100000 IGS_022 igs ycf4|cemA ycf4-cemA 20284 20759 0 476 Genome 0.004435 6 7 143 125 no 0.555556 7 0.714286 0.004497 0.987395 47.100000 cemA gene cemA cemA 20760 21545 1 786 Genome 0.002757 6 0 18 31 no 0.333333 5 0.600000 0.002757 1.000000 34.800000 IGS_023 igs cemA|petA cemA-petA 21546 21685 0 140 Genome 0.001587 1 0 201 129 no 0.111111 2 0.500000 0.001587 1.000000 32.100000 petA gene petA petA 21686 22651 1 966 Genome 0.001208 3 0 108 43 no 0.000000 2 0.000000 0.001208 1.000000 29.200000 IGS_024 igs petA|psbJ petA-psbJ 22652 23181 0 530 Genome 0.005608 9 15 300 17 no 0.777778 8 0.875000 0.005577 0.998113 47.400000 psbJ gene psbJ psbJ 23182 23295 -1 114 Genome 0.003411 1 0 120 4 no 0.000000 2 0.000000 0.003411 1.000000 21.700000 IGS_025 igs psbJ|psbL psbJ-psbL 23296 23412 0 117 Genome 0.015670 5 0 96 9 no 0.222222 4 0.500000 0.015670 1.000000 36.000000 psbL gene psbL psbL 23413 23529 -1 117 Genome 0.003799 2 0 7 300 no 0.222222 3 0.666667 0.003799 1.000000 27.300000 IGS_026 igs psbL|psbF psbL-psbF 23530 23561 0 32 Genome 0.000000 0 0 47 300 no 0.000000 1 0.000000 0.000000 1.000000 22.300000 psbF gene psbF psbF 23562 23681 -1 120 Genome 0.000000 0 0 79 300 no 0.000000 1 0.000000 0.000000 1.000000 24.700000 IGS_027 igs psbF|psbE psbF-psbE 23682 23690 0 9 Genome 0.000000 0 0 199 300 no 0.000000 1 0.000000 NA 1.000000 33.700000 psbE gene psbE psbE 23691 23948 -1 258 Genome 0.000000 0 0 208 216 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_028 igs psbE|petL psbE-petL 23949 24412 0 464 Genome 0.005747 7 14 300 7 no 0.444444 6 0.666667 0.005835 1.000000 39.100000 petL gene petL petL 24413 24508 1 96 Genome 0.008102 2 0 9 40 no 0.111111 3 0.333333 0.008102 1.000000 27.800000 IGS_029 igs petL|petG petL-petG 24509 24616 0 108 Genome 0.005144 1 0 81 35 no 0.000000 2 0.000000 0.005144 1.000000 24.800000 petG gene petG petG 24617 24730 1 114 Genome 0.001949 1 0 67 20 no 0.111111 2 0.500000 0.001949 1.000000 24.300000 IGS_030 igs petG|trnW-CCA petG-trnW-CCA 24731 24845 0 115 Genome 0.007246 3 11 78 102 no 0.222222 4 0.500000 0.007706 1.000000 40.900000 trnW-CCA tRNA trnW-CCA trnW-CCA 24846 24919 -1 74 Genome 0.000000 0 0 3 28 no 0.000000 1 0.000000 0.000000 1.000000 19.000000 IGS_031 igs trnW-CCA|trnP-UGG trnW-CCA-trnP-UGG 24920 25029 0 110 Genome 0.006061 3 1 77 58 no 0.222222 4 0.500000 0.006075 1.000000 34.500000 trnP-UGG tRNA trnP-UGG trnP-UGG 25030 25104 -1 75 Genome 0.005185 1 0 34 46 no 0.000000 2 0.000000 0.005185 1.000000 25.300000 IGS_032 igs trnP-UGG|psaJ trnP-UGG-psaJ 25105 25406 0 302 Genome 0.006820 5 5 16 89 no 0.555556 7 0.714286 0.006219 0.996689 37.400000 psaJ gene psaJ psaJ 25407 25535 1 129 Genome 0.003015 1 0 116 12 no 0.000000 2 0.000000 0.003015 1.000000 22.000000 IGS_033 igs psaJ|rpl33 psaJ-rpl33 25536 25835 0 300 Genome 0.014180 16 14 39 66 no 0.777778 8 0.875000 0.013343 0.993333 54.600000 rpl33 gene rpl33 rpl33 25836 26036 1 201 Genome 0.006357 5 0 29 51 no 0.333333 5 0.600000 0.006357 1.000000 33.100000 IGS_034 igs rpl33|rps18 rpl33-rps18 26037 26199 0 163 Genome 0.007157 3 0 9 84 no 0.333333 4 0.750000 0.007157 1.000000 31.200000 rps18 gene rps18 rps18 26200 26619 1 420 Genome 0.003042 5 0 93 65 no 0.333333 5 0.600000 0.003042 1.000000 35.200000 IGS_035 igs rps18|rpl20 rps18-rpl20 26620 26781 0 162 Genome 0.024912 10 1 186 117 no 0.666667 7 0.857143 0.024208 1.000000 59.700000 rpl20 gene rpl20 rpl20 26782 27132 -1 351 Genome 0.003640 3 0 29 3 no 0.111111 3 0.333333 0.003640 1.000000 24.800000 IGS_036 igs rpl20|rps12 rpl20-rps12 27133 27847 0 715 Genome 0.004274 10 13 140 86 no 0.666667 7 0.857143 0.004311 1.000000 49.800000 rps12_part1 gene rps12 rps12 27848 27967 -1 120 Genome 0.011806 4 0 72 70 no 0.333333 6 0.500000 0.011806 1.000000 39.700000 IGS_037 igs rps12|clpP rps12-clpP 27968 28740 0 773 Genome 0.050320 110 99 2 12 yes 0.777778 8 0.875000 0.049095 0.976714 79.300000 clpP gene clpP clpP 28741 29685 1 945 Genome 0.006966 21 47 20 16 no 0.777778 8 0.875000 0.006603 1.000000 52.600000 IGS_038 igs clpP|trnL-UAG clpP-trnL-UAG 29686 29818 0 133 Genome 0.035147 12 15 89 129 yes 0.666667 7 0.857143 0.034218 1.000000 70.600000 trnL-UAG tRNA trnL-UAG trnL-UAG 29819 29898 1 80 Genome 0.000000 0 0 12 49 no 0.000000 1 0.000000 0.000000 1.000000 19.700000 IGS_039 igs trnL-UAG|ccsA trnL-UAG-ccsA 29899 30092 0 194 Genome 0.005441 4 0 92 107 no 0.333333 4 0.750000 0.005441 1.000000 36.900000 ccsA gene ccsA ccsA 30093 31031 1 939 Genome 0.001538 5 0 19 3 no 0.333333 5 0.600000 0.001538 1.000000 32.800000 IGS_040 igs ccsA|ycf1 ccsA-ycf1 31032 31066 0 35 Genome 0.014286 1 0 300 4 no 0.000000 2 0.000000 0.014286 1.000000 29.000000 ycf1 gene ycf1 ycf1 31067 38326 -1 7260 Genome 0.017844 372 213 31 1 yes 0.777778 8 0.875000 0.017824 1.000000 51.300000 IGS_041 igs ycf1|trnL-CAA ycf1-trnL-CAA 38327 39436 0 1110 Genome 0.032666 108 701 38 29 yes 0.777778 8 0.875000 0.055692 0.661261 64.400000 trnL-CAA tRNA trnL-CAA trnL-CAA 39437 39517 1 81 Genome 0.010288 3 1 3 27 no 0.444444 5 0.800000 0.010305 1.000000 38.100000 IGS_042 igs trnL-CAA|ycf2 trnL-CAA-ycf2 39518 39799 0 282 Genome 0.119140 84 64 16 224 yes 0.777778 8 0.875000 0.117624 0.996454 74.500000 ycf2 gene ycf2 ycf2 39800 47110 -1 7311 Genome 0.007931 168 51 52 2 no 0.777778 8 0.875000 0.007903 1.000000 40.800000 IGS_043 igs ycf2|trnI-CAU ycf2-trnI-CAU 47111 47319 0 209 Genome 0.010766 8 7 46 166 no 0.777778 8 0.875000 0.008050 0.976077 49.800000 trnI-CAU tRNA trnI-CAU trnI-CAU 47320 47392 1 73 Genome 0.000000 0 0 25 93 no 0.000000 1 0.000000 0.000000 1.000000 20.600000 trnI-CAU tRNA trnI-CAU trnI-CAU 47322 47392 1 71 Genome 0.000000 0 0 27 93 no 0.000000 1 0.000000 0.000000 1.000000 20.800000 IGS_045 igs trnI-CAU|ndhB trnI-CAU-ndhB 47393 47767 0 375 Genome 0.011481 14 2 98 87 no 0.666667 7 0.857143 0.011348 1.000000 49.800000 ndhB gene ndhB ndhB 47768 49979 -1 2212 Genome 0.003052 22 9 13 5 no 0.777778 8 0.875000 0.002873 0.997740 41.500000 IGS_046 igs ndhB|rps7 ndhB-rps7 49980 50238 0 259 Genome 0.008580 7 0 17 300 no 0.222222 4 0.500000 0.008580 1.000000 31.400000 rps7 gene rps7 rps7 50239 50706 -1 468 Genome 0.000475 1 0 0 78 no 0.111111 2 0.500000 0.000475 1.000000 24.800000 IGS_047 igs rps7|rps12 rps7-rps12 50707 50754 0 48 Genome 0.000000 0 0 132 30 no 0.000000 1 0.000000 0.000000 1.000000 21.000000 rps12_part2 gene rps12 rps12 50755 51532 -1 778 Genome 0.002714 5 0 180 20 no 0.111111 4 0.250000 0.002714 1.000000 30.600000 IGS_048 igs rps12|trnV-GAC rps12-trnV-GAC 51533 52515 0 983 Genome 0.015265 41 156 300 104 yes 1.000000 9 1.000000 0.010041 0.998983 68.600000 trnV-GAC tRNA trnV-GAC trnV-GAC 52516 52587 1 72 Genome 0.000000 0 0 3 32 no 0.000000 1 0.000000 0.000000 1.000000 19.000000 IGS_049 igs trnV-GAC|rrn16 trnV-GAC-rrn16 52588 53143 0 556 Genome 0.014802 24 21 75 300 yes 0.777778 8 0.875000 0.014046 0.991007 60.600000 rrn16 rRNA rrn16 rrn16 53144 54627 1 1484 Genome 0.000000 0 0 63 130 no 0.000000 1 0.000000 0.000000 1.000000 29.700000 IGS_050 igs rrn16|trnI-GAU rrn16-trnI-GAU 54628 55682 0 1055 Genome 0.024533 61 407 300 55 yes 0.777778 8 0.875000 0.023267 0.829384 61.300000 trnI-GAU_part1 tRNA trnI-GAU trnI-GAU 55683 55724 1 42 Genome 0.000000 0 0 37 13 no 0.000000 1 0.000000 0.000000 1.000000 19.700000 trnI-GAU_part2 tRNA trnI-GAU trnI-GAU 56604 56638 1 35 Genome 0.000000 0 0 63 116 no 0.000000 1 0.000000 0.000000 1.000000 23.500000 IGS_053 igs trnI-GAU|trnA-UGC trnI-GAU-trnA-UGC 56639 56689 0 51 Genome 0.000000 0 0 98 65 no 0.000000 1 0.000000 0.000000 1.000000 23.600000 trnA-UGC_part1 tRNA trnA-UGC trnA-UGC 56690 56727 1 38 Genome 0.000000 0 0 149 27 no 0.000000 1 0.000000 0.000000 1.000000 20.800000 trnA-UGC_part2 tRNA trnA-UGC trnA-UGC 57499 57534 1 36 Genome 0.000000 0 0 130 18 no 0.000000 1 0.000000 0.000000 1.000000 20.100000 IGS_056 igs trnA-UGC|rrn23 trnA-UGC-rrn23 57535 57672 0 138 Genome 0.011962 4 4 166 259 no 0.444444 6 0.666667 0.005315 0.985507 51.600000 rrn23 rRNA rrn23 rrn23 57673 60641 1 2969 Genome 0.001652 14 1 79 121 no 0.777778 8 0.875000 0.001609 1.000000 43.800000 IGS_057 igs rrn23|rrn4.5 rrn23-rrn4.5 60642 60643 0 2 Genome 0.000000 0 0 22 119 no 0.000000 1 0.000000 NA 1.000000 20.400000 rrn4.5 rRNA rrn4.5 rrn4.5 60644 60739 1 96 Genome 0.000000 0 0 24 23 no 0.000000 1 0.000000 0.000000 1.000000 20.500000 IGS_058 igs rrn4.5|rrn5 rrn4.5-rrn5 60740 61049 0 310 Genome 0.005018 4 4 120 160 no 0.333333 5 0.600000 0.005044 1.000000 39.600000 rrn5 rRNA rrn5 rrn5 61050 61170 1 121 Genome 0.000000 0 0 21 39 no 0.000000 1 0.000000 0.000000 1.000000 20.300000 IGS_059 igs rrn5|trnR-ACG rrn5-trnR-ACG 61171 61284 0 114 Genome 0.017544 7 9 142 134 yes 0.666667 7 0.857143 0.018003 1.000000 62.800000 trnR-ACG tRNA trnR-ACG trnR-ACG 61285 61358 1 74 Genome 0.000000 0 0 16 60 no 0.000000 1 0.000000 0.000000 1.000000 20.000000 IGS_060 igs trnR-ACG|trnN-GUU trnR-ACG-trnN-GUU 61359 61710 0 352 Genome 0.003157 3 20 90 85 no 0.333333 5 0.600000 0.003202 1.000000 40.900000 trnN-GUU tRNA trnN-GUU trnN-GUU 61711 61783 1 73 Genome 0.000000 0 0 111 12 no 0.000000 1 0.000000 0.000000 1.000000 19.700000 IGS_061 igs trnN-GUU|ndhF trnN-GUU-ndhF 61784 62435 0 652 Genome 0.007881 16 28 184 13 no 0.777778 8 0.875000 0.007200 0.998466 52.200000 ndhF gene ndhF ndhF 62436 64652 -1 2217 Genome 0.001754 13 0 1 9 no 0.555556 7 0.714286 0.001754 1.000000 35.500000 IGS_062 igs ndhF|rpl32 ndhF-rpl32 64653 65408 0 756 Genome 0.005732 13 120 251 102 no 0.777778 8 0.875000 0.005940 0.998677 57.200000 rpl32 gene rpl32 rpl32 65409 65675 1 267 Genome 0.000832 1 0 26 64 no 0.111111 2 0.500000 0.000832 1.000000 23.600000 IGS_063 igs rpl32|rps15 rpl32-rps15 65676 66095 0 420 Genome 0.005952 6 7 164 259 no 0.222222 5 0.400000 0.006004 1.000000 44.100000 rps15 gene rps15 rps15 66096 66362 1 267 Genome 0.002081 1 0 10 98 no 0.000000 2 0.000000 0.002081 1.000000 20.900000 IGS_064 igs rps15|ndhH rps15-ndhH 66363 66469 0 107 Genome 0.002077 1 2 7 254 no 0.333333 4 0.750000 0.002084 1.000000 29.900000 ndhH gene ndhH ndhH 66470 67651 1 1182 Genome 0.001645 5 0 8 22 no 0.111111 4 0.250000 0.001645 1.000000 29.000000 IGS_065 igs ndhH|ndhA ndhH-ndhA 67652 67652 0 1 Genome 0.000000 0 0 88 21 no 0.000000 1 0.000000 NA 1.000000 20.300000 ndhA gene ndhA ndhA 67653 69526 1 1874 Genome 0.005019 26 13 89 2 no 0.777778 8 0.875000 0.004932 0.999466 43.800000 IGS_066 igs ndhA|ndhI ndhA-ndhI 69527 69642 0 116 Genome 0.005268 2 0 183 209 no 0.111111 3 0.333333 0.005268 1.000000 39.100000 ndhI gene ndhI ndhI 69643 70125 1 483 Genome 0.001265 2 0 15 93 no 0.111111 3 0.333333 0.001265 1.000000 26.900000 IGS_067 igs ndhI|ndhG ndhI-ndhG 70126 70453 0 328 Genome 0.004404 5 5 66 173 no 0.777778 8 0.875000 0.004448 0.993902 44.400000 ndhG gene ndhG ndhG 70454 70999 1 546 Genome 0.000814 2 0 5 241 no 0.222222 3 0.666667 0.000814 1.000000 29.200000 IGS_068 igs ndhG|ndhE ndhG-ndhE 71000 71121 0 122 Genome 0.000000 0 0 75 119 no 0.000000 1 0.000000 0.000000 1.000000 24.400000 ndhE gene ndhE ndhE 71122 71424 1 303 Genome 0.003300 3 0 197 10 no 0.111111 3 0.333333 0.003300 1.000000 24.400000 IGS_069 igs ndhE|psaC ndhE-psaC 71425 71784 0 360 Genome 0.017593 15 1 110 300 no 0.333333 5 0.600000 0.017616 1.000000 48.000000 psaC gene psaC psaC 71785 72030 1 246 Genome 0.000000 0 0 1 141 no 0.000000 1 0.000000 0.000000 1.000000 18.800000 IGS_070 igs psaC|ndhD psaC-ndhD 72031 72165 0 135 Genome 0.000000 0 0 247 6 no 0.000000 1 0.000000 0.000000 1.000000 19.200000 ndhD gene ndhD ndhD 72166 73686 1 1521 Genome 0.002593 12 0 300 3 no 0.666667 7 0.857143 0.002593 1.000000 39.800000 IGS_071 igs ndhD|trnF-GAA ndhD-trnF-GAA 73687 73972 0 286 Genome 0.013209 10 1 5 80 no 0.777778 8 0.875000 0.013252 0.996503 44.400000 trnF-GAA tRNA trnF-GAA trnF-GAA 73973 74045 -1 73 Genome 0.000000 0 0 2 7 no 0.000000 1 0.000000 0.000000 1.000000 18.900000 IGS_072 igs trnF-GAA|trnL-UAA trnF-GAA-trnL-UAA 74046 74244 0 199 Genome 0.007259 5 7 75 300 no 0.555556 7 0.714286 0.007478 0.974874 44.600000 trnL-UAA_part2 tRNA trnL-UAA trnL-UAA 74245 74294 -1 50 Genome 0.000000 0 0 61 287 no 0.000000 1 0.000000 0.000000 1.000000 23.300000 trnL-UAA_part1 tRNA trnL-UAA trnL-UAA 74580 74617 -1 38 Genome 0.005848 1 0 300 274 no 0.111111 2 0.500000 0.005848 1.000000 41.800000 IGS_075 igs trnL-UAA|trnQ-UUG trnL-UAA-trnQ-UUG 74618 74823 0 206 Genome 0.000000 0 0 35 68 no 0.000000 1 0.000000 0.000000 1.000000 21.400000 trnQ-UUG tRNA trnQ-UUG trnQ-UUG 74824 74895 -1 72 Genome 0.003086 1 0 241 51 no 0.111111 2 0.500000 0.003086 1.000000 27.800000 trnQ-UUG tRNA trnQ-UUG trnQ-UUG 74825 74896 -1 72 Genome 0.003086 1 0 242 50 no 0.111111 2 0.500000 0.003086 1.000000 27.700000 IGS_077 igs trnQ-UUG|trnT-UGU trnQ-UUG-trnT-UGU 74897 75048 0 152 Genome 0.006213 3 1 4 83 no 0.444444 6 0.666667 0.006257 1.000000 33.400000 trnT-UGU tRNA trnT-UGU trnT-UGU 75049 75121 1 73 Genome 0.000000 0 0 77 10 no 0.000000 1 0.000000 0.000000 1.000000 19.500000 IGS_078 igs trnT-UGU|rps4 trnT-UGU-rps4 75122 75423 0 302 Genome 0.003311 3 0 150 80 no 0.111111 3 0.333333 0.003311 1.000000 29.600000 rps4 gene rps4 rps4 75424 76047 1 624 Genome 0.005075 9 0 27 109 no 0.555556 6 0.833333 0.005075 1.000000 41.500000 IGS_079 igs rps4|trnS-GGA rps4-trnS-GGA 76048 76259 0 212 Genome 0.004193 2 6 27 23 no 0.111111 4 0.250000 0.004281 1.000000 28.900000 trnS-GGA tRNA trnS-GGA trnS-GGA 76260 76346 1 87 Genome 0.002554 1 0 33 9 no 0.111111 2 0.500000 0.002554 1.000000 24.100000 IGS_080 igs trnS-GGA|ycf3 trnS-GGA-ycf3 76347 77042 0 696 Genome 0.008541 16 0 63 160 no 0.777778 8 0.875000 0.008541 1.000000 51.000000 ycf3 gene ycf3 ycf3 77043 78998 1 1956 Genome 0.003920 19 43 11 27 no 0.666667 7 0.857143 0.003788 0.989264 42.600000 IGS_081 igs ycf3|psaA ycf3-psaA 78999 79538 0 540 Genome 0.007716 13 5 234 300 yes 0.777778 8 0.875000 0.007747 1.000000 60.900000 psaA gene psaA psaA 79539 81788 1 2250 Genome 0.000543 4 0 49 188 no 0.222222 4 0.500000 0.000543 1.000000 31.700000 IGS_082 igs psaA|psaB psaA-psaB 81789 81809 0 21 Genome 0.000000 0 0 240 167 no 0.000000 1 0.000000 0.000000 1.000000 31.300000 psaB gene psaB psaB 81810 84014 1 2205 Genome 0.001159 7 0 261 300 no 0.333333 5 0.600000 0.001159 1.000000 45.700000 IGS_083 igs psaB|rps14 psaB-rps14 84015 84141 0 127 Genome 0.000000 0 0 300 176 no 0.000000 1 0.000000 0.000000 1.000000 31.900000 rps14 gene rps14 rps14 84142 84444 1 303 Genome 0.002017 2 0 300 16 no 0.222222 3 0.666667 0.002017 1.000000 25.900000 IGS_084 igs rps14|trnfM-CAU rps14-trnfM-CAU 84445 84588 0 144 Genome 0.004244 2 1 95 88 no 0.111111 4 0.250000 0.004274 0.993056 31.700000 trnfM-CAU tRNA trnfM-CAU trnfM-CAU 84589 84663 1 75 Genome 0.000000 0 0 79 13 no 0.000000 1 0.000000 0.000000 1.000000 19.700000 IGS_085 igs trnfM-CAU|trnG-GCC trnfM-CAU-trnG-GCC 84664 84759 0 96 Genome 0.010417 3 5 154 50 no 0.222222 4 0.500000 0.010989 1.000000 40.800000 trnG-GCC tRNA trnG-GCC trnG-GCC 84760 84830 -1 71 Genome 0.007825 1 0 22 9 no 0.000000 2 0.000000 0.007825 1.000000 24.700000 IGS_086 igs trnG-GCC|psbZ trnG-GCC-psbZ 84831 85037 0 207 Genome 0.005099 4 10 20 178 no 0.222222 4 0.500000 0.005229 1.000000 34.900000 psbZ gene psbZ psbZ 85038 85226 -1 189 Genome 0.001176 1 0 44 19 no 0.111111 2 0.500000 0.001176 1.000000 23.400000 IGS_087 igs psbZ|trnS-UGA psbZ-trnS-UGA 85227 85471 0 245 Genome 0.013379 8 0 10 118 no 0.555556 7 0.714286 0.013379 1.000000 40.000000 trnS-UGA tRNA trnS-UGA trnS-UGA 85472 85557 1 86 Genome 0.000000 0 0 6 32 no 0.000000 1 0.000000 0.000000 1.000000 19.200000 IGS_088 igs trnS-UGA|psbC trnS-UGA-psbC 85558 85755 0 198 Genome 0.010943 6 0 92 213 no 0.333333 5 0.600000 0.010943 1.000000 40.600000 psbC gene psbC psbC 85756 87177 -1 1422 Genome 0.001172 6 0 16 300 no 0.222222 4 0.500000 0.001172 1.000000 31.400000 psbD gene psbD psbD 87125 88186 -1 1062 Genome 0.000418 2 0 72 160 no 0.222222 3 0.666667 0.000418 1.000000 35.000000 IGS_090 igs psbD|trnT-GGU psbD-trnT-GGU 88187 88984 0 798 Genome 0.006494 15 8 300 63 no 0.444444 6 0.666667 0.006225 1.000000 44.500000 trnT-GGU tRNA trnT-GGU trnT-GGU 88985 89056 -1 72 Genome 0.005401 1 0 4 58 no 0.000000 2 0.000000 0.005401 1.000000 23.200000 IGS_091 igs trnT-GGU|trnE-UUC trnT-GGU-trnE-UUC 89057 89257 0 201 Genome 0.007186 5 0 8 194 no 0.555556 6 0.833333 0.007186 1.000000 36.100000 trnE-UUC tRNA trnE-UUC trnE-UUC 89258 89330 1 73 Genome 0.000000 0 0 39 121 no 0.000000 1 0.000000 0.000000 1.000000 21.700000 IGS_092 igs trnE-UUC|trnY-GUA trnE-UUC-trnY-GUA 89331 89397 0 67 Genome 0.000000 0 1 112 54 no 0.111111 2 0.500000 0.000000 1.000000 26.700000 trnY-GUA tRNA trnY-GUA trnY-GUA 89398 89481 1 84 Genome 0.002646 1 0 179 119 no 0.111111 2 0.500000 0.002646 1.000000 32.400000 IGS_093 igs trnY-GUA|trnD-GUC trnY-GUA-trnD-GUC 89482 89707 0 226 Genome 0.006883 5 1 29 127 no 0.333333 5 0.600000 0.006893 1.000000 33.600000 trnD-GUC tRNA trnD-GUC trnD-GUC 89708 89781 1 74 Genome 0.000000 0 0 15 53 no 0.000000 1 0.000000 0.000000 1.000000 19.900000 IGS_094 igs trnD-GUC|psbM trnD-GUC-psbM 89782 90242 0 461 Genome 0.012382 14 221 89 142 no 0.555556 7 0.714286 0.012126 0.963124 50.200000 psbM gene psbM psbM 90243 90353 1 111 Genome 0.000000 0 0 66 31 no 0.000000 1 0.000000 0.000000 1.000000 21.100000 IGS_095 igs psbM|petN psbM-petN 90354 91045 0 692 Genome 0.022703 33 92 177 116 yes 0.777778 8 0.875000 0.023897 0.945087 68.100000 petN gene petN petN 91046 91135 -1 90 Genome 0.000000 0 0 31 26 no 0.000000 1 0.000000 0.000000 1.000000 20.700000 IGS_096 igs petN|trnC-GCA petN-trnC-GCA 91136 91453 0 318 Genome 0.011792 10 47 121 147 no 0.777778 8 0.875000 0.011019 1.000000 57.300000 trnC-GCA tRNA trnC-GCA trnC-GCA 91454 91524 -1 71 Genome 0.000000 0 0 51 76 no 0.000000 1 0.000000 0.000000 1.000000 22.600000 IGS_097 igs trnC-GCA|rpoB trnC-GCA-rpoB 91525 92034 0 510 Genome 0.009757 16 10 122 29 no 0.666667 7 0.857143 0.009442 1.000000 48.500000 rpoB gene rpoB rpoB 92035 95325 1 3291 Genome 0.003072 29 3 12 239 no 0.777778 8 0.875000 0.003073 1.000000 39.500000 IGS_098 igs rpoB|rpoC1 rpoB-rpoC1 95326 95351 0 26 Genome 0.000000 0 0 42 213 no 0.000000 1 0.000000 0.000000 1.000000 21.900000 rpoC1 gene rpoC1 rpoC1 95352 98200 1 2849 Genome 0.004009 36 5 68 130 no 0.777778 8 0.875000 0.003943 1.000000 45.500000 IGS_099 igs rpoC1|rpoC2 rpoC1-rpoC2 98201 98374 0 174 Genome 0.003831 3 6 28 21 no 0.333333 4 0.750000 0.003849 1.000000 34.600000 rpoC2 gene rpoC2 rpoC2 98375 101875 1 3501 Genome 0.005570 54 0 4 7 no 0.777778 8 0.875000 0.005570 1.000000 40.400000 IGS_100 igs rpoC2|rps2 rpoC2-rps2 101876 102013 0 138 Genome 0.019726 7 0 3 66 no 0.222222 4 0.500000 0.019726 1.000000 38.400000 rps2 gene rps2 rps2 102014 102709 1 696 Genome 0.002714 7 0 3 3 no 0.666667 7 0.857143 0.002714 1.000000 40.200000 IGS_101 igs rps2|atpI rps2-atpI 102710 102952 0 243 Genome 0.007316 5 2 38 300 no 0.555556 6 0.833333 0.007342 1.000000 38.900000 atpI gene atpI atpI 102953 103699 1 747 Genome 0.001116 3 0 60 48 no 0.333333 4 0.750000 0.001116 1.000000 35.900000 IGS_102 igs atpI|atpH atpI-atpH 103700 104260 0 561 Genome 0.010200 15 6 2 300 no 0.444444 6 0.666667 0.010263 1.000000 41.800000 atpH gene atpH atpH 104261 104506 1 246 Genome 0.000000 0 0 122 123 no 0.000000 1 0.000000 0.000000 1.000000 27.900000 IGS_103 igs atpH|atpF atpH-atpF 104507 104813 0 307 Genome 0.004524 4 2 300 234 no 0.444444 6 0.666667 0.004539 1.000000 46.700000 atpF gene atpF atpF 104814 106018 1 1205 Genome 0.001752 6 1 102 9 no 0.444444 6 0.666667 0.001753 1.000000 35.500000 IGS_104 igs atpF|atpA atpF-atpA 106019 106182 0 164 Genome 0.050426 22 25 92 147 yes 0.777778 8 0.875000 0.047386 0.981707 80.100000 atpA gene atpA atpA 106183 107706 1 1524 Genome 0.003463 15 0 17 10 no 0.666667 7 0.857143 0.003463 1.000000 41.000000 IGS_105 igs atpA|trnR-UCU atpA-trnR-UCU 107707 107763 0 57 Genome 0.019493 2 0 3 80 no 0.000000 2 0.000000 0.019493 1.000000 32.100000 trnR-UCU tRNA trnR-UCU trnR-UCU 107764 107835 -1 72 Genome 0.000000 0 0 15 8 no 0.000000 1 0.000000 0.000000 1.000000 19.400000 IGS_106 igs trnR-UCU|trnG-UCC trnR-UCU-trnG-UCC 107836 107986 0 151 Genome 0.007358 5 0 87 63 no 0.222222 3 0.666667 0.007358 1.000000 35.100000 trnG-UCC_part2 tRNA trnG-UCC trnG-UCC 107987 108034 -1 48 Genome 0.000000 0 0 29 15 no 0.000000 1 0.000000 0.000000 1.000000 19.900000 trnG-UCC_part1 tRNA trnG-UCC trnG-UCC 108791 108813 -1 23 Genome 0.000000 0 0 71 27 no 0.000000 1 0.000000 0.000000 1.000000 20.800000 IGS_109 igs trnG-UCC|psaM trnG-UCC-psaM 108814 109285 0 472 Genome 0.008592 12 0 94 39 no 0.444444 6 0.666667 0.008592 1.000000 40.600000 psaM gene psaM psaM 109286 109387 1 102 Genome 0.003813 1 0 5 2 no 0.000000 2 0.000000 0.003813 1.000000 21.800000 IGS_110 igs psaM|trnS-GCU psaM-trnS-GCU 109388 109552 0 165 Genome 0.004714 2 5 62 112 no 0.222222 4 0.500000 0.004745 1.000000 34.900000 trnS-GCU tRNA trnS-GCU trnS-GCU 109553 109640 1 88 Genome 0.000000 0 0 115 24 no 0.000000 1 0.000000 0.000000 1.000000 20.600000 IGS_111 igs trnS-GCU|psbI trnS-GCU-psbI 109641 109709 0 69 Genome 0.009777 2 27 203 187 no 0.222222 4 0.500000 0.009087 1.000000 48.500000 psbI gene psbI psbI 109710 109820 -1 111 Genome 0.000000 0 0 19 76 no 0.000000 1 0.000000 0.000000 1.000000 20.200000 IGS_112 igs psbI|psbK psbI-psbK 109821 110424 0 604 Genome 0.009382 16 2 130 245 no 0.666667 7 0.857143 0.009397 1.000000 55.200000 psbK gene psbK psbK 110425 110610 -1 186 Genome 0.000000 0 0 20 59 no 0.000000 1 0.000000 0.000000 1.000000 20.200000 IGS_113 igs psbK|trnQ-UUG psbK-trnQ-UUG 110611 110934 0 324 Genome 0.005658 6 0 206 251 no 0.444444 6 0.666667 0.005658 1.000000 47.400000 trnQ-UUG tRNA trnQ-UUG trnQ-UUG 110935 111006 1 72 Genome 0.000000 0 0 123 179 no 0.000000 1 0.000000 0.000000 1.000000 28.000000 trnQ-UUG tRNA trnQ-UUG trnQ-UUG 110936 111007 1 72 Genome 0.000000 0 0 124 178 no 0.000000 1 0.000000 0.000000 1.000000 28.000000 IGS_115 igs trnQ-UUG|chlB trnQ-UUG-chlB 111008 111156 0 149 Genome 0.000000 0 0 196 29 no 0.000000 1 0.000000 0.000000 1.000000 20.900000 chlB gene chlB chlB 111157 112680 1 1524 Genome 0.003609 17 0 300 50 no 0.777778 8 0.875000 0.003609 1.000000 46.300000 IGS_116 igs chlB|trnK-UUU chlB-trnK-UUU 112681 113832 0 1152 Genome 0.006352 20 57 160 62 no 0.666667 7 0.857143 0.006287 1.000000 53.100000 trnK-UUU_part1 tRNA trnK-UUU trnK-UUU 113833 113869 1 37 Genome 0.000000 0 0 182 25 no 0.000000 1 0.000000 0.000000 1.000000 20.600000 matK gene matK matK 114586 116091 1 1506 Genome 0.015949 65 62 18 15 no 0.666667 7 0.857143 0.015837 1.000000 56.000000 IGS_119 igs matK|trnK-UUU matK-trnK-UUU 116092 116303 0 212 Genome 0.007375 4 54 1 141 no 0.222222 4 0.500000 0.006041 1.000000 33.200000 trnK-UUU_part2 tRNA trnK-UUU trnK-UUU 116304 116328 1 25 Genome 0.000000 0 0 1 116 no 0.000000 1 0.000000 0.000000 1.000000 18.800000 IGS_120 igs trnK-UUU|psbA trnK-UUU-psbA 116329 116802 0 474 Genome 0.004805 6 31 26 300 no 0.555556 7 0.714286 0.004907 1.000000 44.500000 psbA gene psbA psbA 116803 117864 1 1062 Genome 0.000942 3 0 199 51 no 0.111111 4 0.250000 0.000942 1.000000 31.700000 IGS_121 igs psbA|trnI-CAU psbA-trnI-CAU 117865 117991 0 127 Genome 0.008311 4 0 249 154 no 0.444444 5 0.800000 0.008311 1.000000 46.300000 trnI-CAU tRNA trnI-CAU trnI-CAU 117992 118062 -1 71 Genome 0.000000 0 0 37 83 no 0.000000 1 0.000000 0.000000 1.000000 21.500000 trnI-CAU tRNA trnI-CAU trnI-CAU 117992 118064 -1 73 Genome 0.000000 0 0 37 81 no 0.000000 1 0.000000 0.000000 1.000000 21.500000 IGS_123 igs trnI-CAU|trnH-GUG trnI-CAU-trnH-GUG 118065 118318 0 254 Genome 0.016342 10 38 110 125 no 0.666667 7 0.857143 0.016668 0.980315 56.800000 trnH-GUG tRNA trnH-GUG trnH-GUG 118319 118393 1 75 Genome 0.000000 0 0 61 50 no 0.000000 1 0.000000 0.000000 1.000000 22.500000 IGS_124 igs trnH-GUG|chlL trnH-GUG-chlL 118394 119045 0 652 Genome 0.011588 18 33 136 44 no 0.666667 7 0.857143 0.011744 1.000000 55.500000 chlL gene chlL chlL 119046 119918 1 873 Genome 0.002036 5 0 20 18 no 0.444444 5 0.800000 0.002036 1.000000 36.300000 IGS_125 igs chlL|chlN chlL-chlN 119919 119939 0 21 Genome 0.010582 1 0 114 150 no 0.111111 2 0.500000 0.010582 1.000000 40.100000 chlN gene chlN chlN 119940 121313 1 1374 Genome 0.003356 12 0 2 68 no 0.444444 6 0.666667 0.003356 1.000000 36.100000 IGS_126 igs chlN|ndhJ chlN-ndhJ 121314 121749 0 436 Genome 0.032656 30 2 59 81 no 0.555556 7 0.714286 0.032212 0.997706 60.200000 ndhJ gene ndhJ ndhJ 121750 122226 -1 477 Genome 0.001281 2 0 32 16 no 0.111111 3 0.333333 0.001281 1.000000 26.800000 IGS_127 igs ndhJ|ndhK ndhJ-ndhK 122227 122327 0 101 Genome 0.002200 1 0 300 53 no 0.111111 2 0.500000 0.002200 1.000000 27.000000 ndhK gene ndhK ndhK 122328 123128 -1 801 Genome 0.001110 2 0 84 26 no 0.000000 3 0.000000 0.001110 1.000000 27.800000 ndhC gene ndhC ndhC 123098 123460 -1 363 Genome 0.000612 1 0 124 15 no 0.111111 2 0.500000 0.000612 1.000000 23.900000 IGS_129 igs ndhC|trnV-UAC ndhC-trnV-UAC 123461 124158 0 698 Genome 0.005969 13 4 300 46 no 0.777778 8 0.875000 0.005977 1.000000 48.700000 trnV-UAC_part2 tRNA trnV-UAC trnV-UAC 124159 124195 -1 37 Genome 0.000000 0 0 6 9 no 0.000000 1 0.000000 0.000000 1.000000 19.200000 trnV-UAC_part1 tRNA trnV-UAC trnV-UAC 124728 124766 -1 39 Genome 0.000000 0 0 64 22 no 0.000000 1 0.000000 0.000000 1.000000 20.400000 IGS_132 igs trnV-UAC|trnM-CAU trnV-UAC-trnM-CAU 124767 124902 0 136 Genome 0.009804 4 1 103 30 no 0.333333 5 0.600000 0.009852 1.000000 36.200000 trnM-CAU tRNA trnM-CAU trnM-CAU 124903 124976 1 74 Genome 0.005255 1 1 1 104 no 0.000000 3 0.000000 0.005327 0.986486 24.100000 IGS_133 igs trnM-CAU|atpB trnM-CAU-atpB 124977 125267 0 291 Genome 0.001336 1 14 43 27 no 0.111111 4 0.250000 0.001355 1.000000 29.600000 atpB gene atpB atpB 125268 126743 1 1476 Genome 0.001468 6 2 186 4 no 0.666667 7 0.857143 0.001468 1.000000 39.100000 IGS_134 igs atpB|atpE atpB-atpE 126744 126753 0 10 Genome 0.047619 1 2 300 233 yes 0.222222 4 0.500000 NA 1.000000 77.100000 atpE gene atpE atpE 126754 127161 1 408 Genome 0.001906 2 0 5 1 no 0.111111 3 0.333333 0.001906 1.000000 24.600000 IGS_135 igs atpE|rbcL atpE-rbcL 127162 127588 0 427 Genome 0.018475 2495 3361 106 59 no 1.000000 9 1.000000 0.006689 0.993977 71.300000