primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score matK-trnK-UUU_p1 matK-trnK-UUU 1 TCCTTGATACCTAACATAATGCA AACGGTAGAGTACTCGGCTT 23 20 34.8 50.0 55.2 58.2 0.0 17.1 5.982162 2706 4223 1544-1577 0.970149 50.8 matK-trnK-UUU_p2 matK-trnK-UUU 2 TCCTTGATACCTAACATAATGCA ACGGTAGAGTACTCGGCTTT 23 20 34.8 50.0 55.2 58.2 0.0 17.1 5.982162 2706 4223 1543-1576 0.970149 50.8 matK-trnK-UUU_p3 matK-trnK-UUU 3 TTCCTTGATACCTAACATAATGCA AACGGTAGAGTACTCGGCTT 24 20 33.3 50.0 55.9 58.2 0.0 17.1 6.260046 2706 4223 1545-1578 0.970149 50.8 matK-trnK-UUU_p4 matK-trnK-UUU 4 TTCCTTGATACCTAACATAATGCA ACGGTAGAGTACTCGGCTTT 24 20 33.3 50.0 55.9 58.2 0.0 17.1 6.260046 2706 4223 1544-1577 0.970149 50.8 matK-trnK-UUU_p5 matK-trnK-UUU 5 TCCTTGATACCTAACATAATGCA GGGTTGCTAACTCAACGGTA 23 20 34.8 50.0 55.2 57.5 0.0 0.0 6.274500 2706 4223 1557-1590 0.925373 49.0 trnK-UUU-rps16_p1 trnK-UUU-rps16 1 CGTTCCGCAACTGGTACTAA AAAAGGGTATGTTGCTGCCA 20 20 50.0 45.0 57.9 58.0 0.0 0.0 0.077079 4261 4926 1614-1724 0.925373 88.4 trnK-UUU-rps16_p2 trnK-UUU-rps16 2 TCAGGATCAGTCGTGGTCTT AAAAGGGTATGTTGCTGCCA 20 20 50.0 45.0 58.1 58.0 0.0 0.0 0.083511 4261 4926 1343-1455 0.925373 88.3 trnK-UUU-rps16_p3 trnK-UUU-rps16 3 CCTTTCAGGATCAGTCGTGG AAAAGGGTATGTTGCTGCCA 20 20 55.0 45.0 58.0 58.0 0.0 0.0 0.023978 4261 4926 1347-1459 0.850746 85.8 trnK-UUU-rps16_p4 trnK-UUU-rps16 4 CGAATCCTCGCTTCATCCAA AAAAGGGTATGTTGCTGCCA 20 20 50.0 45.0 58.1 58.0 0.0 0.0 0.068268 4261 4926 1300-1412 0.820896 84.3 trnK-UUU-rps16_p5 trnK-UUU-rps16 5 CCTTTCAGGATCAGTCGTGG TAACTGCCCCAGAATGAGGA 20 20 55.0 50.0 58.0 58.0 0.0 0.0 0.050322 4261 4926 1225-1339 0.701493 79.7 atpH-atpI_p1 atpH-atpI 1 CAGCAGCAATAACAGAAGCG TTTTGCAACTTTAGCTGCGG 20 20 50.0 45.0 57.8 57.9 0.0 0.0 0.302403 12536 13695 969-1270 1.000000 89.6 atpH-atpI_p2 atpH-atpI 2 GCCAATCCAGCAGCAATAAC TTTTGCAACTTTAGCTGCGG 20 20 50.0 45.0 57.8 57.9 0.0 0.0 0.347127 12536 13695 976-1277 1.000000 89.2 atpH-atpI_p3 atpH-atpI 3 AAGCGGCAGAAATAAGTGGA TTTTGCAACTTTAGCTGCGG 20 20 45.0 45.0 57.5 57.9 1.4 0.0 0.622679 12536 13695 954-1255 1.000000 87.0 atpH-atpI_p4 atpH-atpI 4 CGCGATACCTTCTACAGCTT TTTTGCAACTTTAGCTGCGG 20 20 50.0 45.0 57.5 57.9 0.0 0.0 0.626453 12536 13695 1049-1350 1.000000 87.0 atpH-atpI_p5 atpH-atpI 5 CCAGCAGCAATAACAGAAGC TTTTGCAACTTTAGCTGCGG 20 20 50.0 45.0 57.4 57.9 0.0 0.0 0.689275 12536 13695 970-1271 1.000000 86.5 rpoB-trnC-GCA_p1 rpoB-trnC-GCA 1 TTTGTTCTTGCATGTCCCGA GCAGTGACATCGCACAAAAA 20 20 45.0 45.0 58.0 57.9 0.0 0.0 0.143963 26012 27099 1533-2146 0.880597 86.1 rpoB-trnC-GCA_p2 rpoB-trnC-GCA 2 CGAGCCCATATCCTTGCTTT GCAGTGACATCGCACAAAAA 20 20 50.0 45.0 58.0 57.9 0.0 0.0 0.145356 26012 27099 1753-2366 0.880597 86.1 rpoB-trnC-GCA_p3 rpoB-trnC-GCA 3 TTTGTTCTTGCATGTCCCGA CTTTTGGAAACACGCAGACC 20 20 45.0 50.0 58.0 57.9 0.0 0.0 0.145406 26012 27099 1404-1656 0.880597 86.1 rpoB-trnC-GCA_p4 rpoB-trnC-GCA 4 GAAAATACCGGATCCCCACC CTTTTGGAAACACGCAGACC 20 20 55.0 50.0 58.0 57.9 9.5 0.0 0.142615 26012 27099 1831-2083 0.835821 84.3 rpoB-trnC-GCA_p5 rpoB-trnC-GCA 5 GAAAATACCGGATCCCCACC GCAGTGACATCGCACAAAAA 20 20 55.0 45.0 58.0 57.9 9.5 0.0 0.141172 26012 27099 2218-2573 0.820896 83.7 trnC-GCA-petN_p1 trnC-GCA-petN 1 GGGTGTCGCCTGATTAACAA AGAGTCCACTTCTTCCCCAT 20 20 50.0 50.0 58.2 57.6 1.7 0.0 0.534788 27181 27983 682-947 0.955224 85.9 trnC-GCA-petN_p2 trnC-GCA-petN 2 AGTTCAAATCTGGGTGTCGC AGAGTCCACTTCTTCCCCAT 20 20 50.0 50.0 58.5 57.6 0.0 0.0 0.827105 27181 27983 534-958 1.000000 85.4 trnC-GCA-petN_p3 trnC-GCA-petN 3 GGGTGTCGCCTGATTAACAA TACCATTAAAGCAGCCCAGG 20 20 50.0 50.0 58.2 57.6 1.7 0.0 0.619298 27181 27983 633-898 0.955224 85.3 trnC-GCA-petN_p4 trnC-GCA-petN 4 GGGGGACTGCAAATCCTTTT AGAGTCCACTTCTTCCCCAT 20 20 50.0 50.0 58.4 57.6 14.7 0.0 0.706353 27181 27983 559-983 0.970149 85.2 trnC-GCA-petN_p5 trnC-GCA-petN 5 GGGGGACTGCAAATCCTTTT TACCATTAAAGCAGCCCAGG 20 20 50.0 50.0 58.4 57.6 14.7 0.0 0.790863 27181 27983 510-934 0.970149 84.5 petN-psbM_p1 petN-psbM 1 CCCTTTTGACTCTGCGCTAT GCGCACTGAGCTCTTGATAT 20 20 50.0 50.0 58.0 58.1 9.7 16.2 0.166571 28074 28888 1684-1763 0.656716 76.9 petN-psbM_p2 petN-psbM 2 TTTTTGTGCGATGTCACTGC GCGCACTGAGCTCTTGATAT 20 20 45.0 50.0 57.9 58.1 0.0 16.2 0.254961 28074 28888 1782-1887 0.567164 72.6 petN-psbM_p3 petN-psbM 3 CCCTTTTGACTCTGCGCTAT AATAGCGCACTGAGCTCTTG 20 20 50.0 50.0 58.0 58.4 9.7 16.2 0.380175 28074 28888 1744-1762 0.104478 43.0 petN-psbM_p4 petN-psbM 4 CCCTTTTGACTCTGCGCTAT CAAATAGCGCACTGAGCTCT 20 20 50.0 50.0 58.0 58.4 9.7 16.2 0.380175 28074 28888 1746-1764 0.104478 43.0 petN-psbM_p5 petN-psbM 5 CCCTTTTGACTCTGCGCTAT TCAAATAGCGCACTGAGCTC 20 20 50.0 50.0 58.0 58.4 9.7 11.5 0.384804 28074 28888 1747-1765 0.104478 43.0 trnT-UGU-trnL-UAA_p1 trnT-UGU-trnL-UAA 1 GCGATGCTCTAACCTCTGAG CCGTAGCGTCTACCGATTTC 20 20 55.0 55.0 57.9 58.2 0.0 10.2 0.381189 46093 47032 661-1007 1.000000 89.0 trnT-UGU-trnL-UAA_p2 trnT-UGU-trnL-UAA 2 GGATTCGAACCGATGACCAT CCGTAGCGTCTACCGATTTC 20 20 50.0 55.0 57.8 58.2 0.0 10.2 0.488942 46093 47032 693-1039 1.000000 88.1 trnT-UGU-trnL-UAA_p3 trnT-UGU-trnL-UAA 3 GCGATGCTCTAACCTCTGAG CGTCTACCGATTTCGCCATA 20 20 55.0 50.0 57.9 57.6 0.0 0.0 0.543526 46093 47032 655-1001 1.000000 87.7 trnT-UGU-trnL-UAA_p4 trnT-UGU-trnL-UAA 4 GCGATGCTCTAACCTCTGAG GGTTTCCATACCAAGGCTCA 20 20 55.0 50.0 57.9 57.5 0.0 0.0 0.640147 46093 47032 693-1039 1.000000 86.9 trnT-UGU-trnL-UAA_p5 trnT-UGU-trnL-UAA 5 GGATTCGAACCGATGACCAT CGTCTACCGATTTCGCCATA 20 20 50.0 50.0 57.8 57.6 0.0 0.0 0.651279 46093 47032 687-1033 1.000000 86.8 ndhC-trnV-UAC_p1 ndhC-trnV-UAC 1 TGGTTCAGGCATTTGCTCAT TGGTAGTGCTCCTGGATCAA 20 20 45.0 50.0 58.1 58.0 2.1 1.1 0.121303 50402 50844 1167-1490 0.955224 89.2 ndhC-trnV-UAC_p2 ndhC-trnV-UAC 2 TGGTTCAGGCATTTGCTCAT TTGGTAGTGCTCCTGGATCA 20 20 45.0 50.0 58.1 58.0 2.1 0.0 0.121303 50402 50844 1168-1491 0.955224 89.2 ndhC-trnV-UAC_p3 ndhC-trnV-UAC 3 TGGTTCAGGCATTTGCTCAT CCGAGAAAGTCTACGGTTCG 20 20 45.0 55.0 58.1 58.1 2.1 0.0 0.180045 50402 50844 967-1283 0.940299 88.2 ndhC-trnV-UAC_p4 ndhC-trnV-UAC 4 TGGTTCAGGCATTTGCTCAT CCGATTCAGGTGCCCATTTA 20 20 45.0 50.0 58.1 57.9 2.1 0.0 0.123847 50402 50844 1438-1760 0.910448 87.4 ndhC-trnV-UAC_p5 ndhC-trnV-UAC 5 GGGGCTAAAACTCCGGAAAT TGGTAGTGCTCCTGGATCAA 20 20 50.0 50.0 57.9 58.0 5.2 1.1 0.188114 50402 50844 560-881 0.835821 83.9 ycf4-cemA_p1 ycf4-cemA 1 GGGATCGCGGGTCTTTTTAT GAAAGAAATCCACCAGGGCA 20 20 50.0 50.0 58.0 58.1 6.1 0.0 0.113472 59820 60523 659-1316 0.522388 72.0 ycf4-cemA_p2 ycf4-cemA 2 GTATTTATGCCCGTCGGGTT GAAAGAAATCCACCAGGGCA 20 20 50.0 50.0 58.0 58.1 30.6 0.0 0.118976 59820 60523 463-1120 0.522388 71.9 ycf4-cemA_p3 ycf4-cemA 3 GTCGCATCTTCCTCCGATTT GAAAGAAATCCACCAGGGCA 20 20 50.0 50.0 58.1 58.1 0.0 0.0 0.135319 59820 60523 526-1183 0.522388 71.8 ycf4-cemA_p4 ycf4-cemA 4 TGTGTTTCTATGGGATCGCG GAAAGAAATCCACCAGGGCA 20 20 50.0 50.0 58.1 58.1 0.0 0.0 0.142056 59820 60523 670-1327 0.507463 71.2 ycf4-cemA_p5 ycf4-cemA 5 AAATCGTCGCATCTTCCTCC GAAAGAAATCCACCAGGGCA 20 20 50.0 50.0 58.1 58.1 0.0 0.0 0.135319 59820 60523 531-1179 0.462687 69.4 rpl16-rps3_p1 rpl16-rps3 1 GTTCAAGTGCCTGAAGACCA AAATTGCACGCATTGAGTGG 20 20 50.0 45.0 58.0 57.9 0.0 20.0 0.101518 80862 82090 1339-1496 0.925373 88.2 rpl16-rps3_p2 rpl16-rps3 2 ACACATCAATTCTCGAGCCC AAATTGCACGCATTGAGTGG 20 20 50.0 45.0 58.0 57.9 7.8 20.0 0.098675 80862 82090 1821-1963 0.895522 87.0 rpl16-rps3_p3 rpl16-rps3 3 GTTCAAGTGCCTGAAGACCA CACGCATTGAGTGGATCAGA 20 20 50.0 50.0 58.0 58.0 0.0 12.2 0.047017 80862 82090 1333-1490 0.880597 86.8 rpl16-rps3_p4 rpl16-rps3 4 ACACATCAATTCTCGAGCCC CACGCATTGAGTGGATCAGA 20 20 50.0 50.0 58.0 58.0 7.8 12.2 0.044174 80862 82090 1815-1957 0.850746 85.7 rpl16-rps3_p5 rpl16-rps3 5 AGATTTTGGACGCCGCTATT CACGCATTGAGTGGATCAGA 20 20 45.0 50.0 58.0 58.0 0.0 12.2 0.052722 80862 82090 1679-1751 0.835821 85.0 ndhF_p1 ndhF 1 ACGAGGGGGATTAAACAGGA AGGGCTAGAATACCCCTTTCT 20 21 50.0 47.6 58.0 57.6 0.0 0.0 1.478684 109061 111280 2707-2914 0.089552 33.6 ndhF_p2 ndhF 2 ACAGGAACAAGAGGGATCCA AGGGCTAGAATACCCCTTTCT 20 21 50.0 47.6 58.0 57.6 15.2 0.0 1.484610 109061 111280 2693-2900 0.089552 33.6 ndhF_p3 ndhF 3 AAGAGGGATCCACCGAAGAA AGGGCTAGAATACCCCTTTCT 20 21 50.0 47.6 58.0 57.6 15.2 0.0 1.487196 109061 111280 2685-2892 0.089552 33.5 ndhF_p4 ndhF 4 ACAACTTACGAAACGAGGGG AGGGCTAGAATACCCCTTTCT 20 21 50.0 47.6 57.8 57.6 0.0 0.0 1.599144 109061 111280 2719-2926 0.089552 32.6 ndhF_p5 ndhF 5 GGTATTGGTCTGGATACGGC AGGGCTAGAATACCCCTTTCT 20 21 55.0 47.6 57.8 57.6 0.0 0.0 1.605136 109061 111280 2933-2995 0.059701 30.8 ndhF-rpl32_p1 ndhF-rpl32 1 CAGGCCGTGTAAACCAAAAC AGGCTTTTAACGCTGTCCAA 20 20 50.0 45.0 57.9 58.0 0.0 0.0 0.152708 111281 112093 952-1418 0.925373 87.8 ndhF-rpl32_p2 ndhF-rpl32 2 CAGGCCGTGTAAACCAAAAC TTCACCATAGCGGCTTTCTC 20 20 50.0 50.0 57.9 58.0 0.0 8.3 0.152543 111281 112093 1964-2040 0.208955 59.1 ndhF-rpl32_p3 ndhF-rpl32 3 GGCAAATAATGGAACGGCAC AGGCTTTTAACGCTGTCCAA 20 20 50.0 45.0 58.1 58.0 0.0 0.0 0.103097 111281 112093 1597-1612 0.074627 44.4 ndhF-rpl32_p4 ndhF-rpl32 4 GGCAAATAATGGAACGGCAC AAGGCTTTTAACGCTGTCCA 20 20 50.0 45.0 58.1 58.0 0.0 0.0 0.103097 111281 112093 1598-1613 0.074627 44.3 ndhF-rpl32_p5 ndhF-rpl32 5 GGCAAATAATGGAACGGCAC TTCACCATAGCGGCTTTCTC 20 20 50.0 50.0 58.1 58.0 0.0 8.3 0.102932 111281 112093 2219-2234 0.059701 43.4 rpl32-trnL-UAG_p1 rpl32-trnL-UAG 1 AGGAAAATCCCTTTCAACTGGA TCCTAAGAGCAGCGTGTCTA 22 20 40.9 50.0 57.5 57.9 0.2 0.0 2.593746 112244 112785 597-663 0.985075 70.7 rpl32-trnL-UAG_p2 rpl32-trnL-UAG 2 AGGAAAATCCCTTTCAACTGGA AGCAGCGTGTCTACCAATTT 22 20 40.9 45.0 57.5 57.8 0.2 0.0 2.654473 112244 112785 590-656 0.985075 70.2 rpl32-trnL-UAG_p3 rpl32-trnL-UAG 3 AGGAAAATCCCTTTCAACTGGA CCTAAGAGCAGCGTGTCTAC 22 20 40.9 55.0 57.5 57.8 0.2 0.0 2.665764 112244 112785 596-662 0.985075 70.1 rpl32-trnL-UAG_p4 rpl32-trnL-UAG 4 AGGAAAATCCCTTTCAACTGGA CTAAGAGCAGCGTGTCTACC 22 20 40.9 55.0 57.5 57.8 0.2 0.0 2.665764 112244 112785 595-661 0.985075 70.1 rpl32-trnL-UAG_p5 rpl32-trnL-UAG 5 AGGAAAATCCCTTTCAACTGGA GAGCAGCGTGTCTACCAATT 22 20 40.9 50.0 57.5 58.3 0.2 0.0 2.742615 112244 112785 591-657 0.985075 69.5 ycf1_p1 ycf1 1 GCAAGTGGAATGCTATCCCA GCGCCCAAAGGAAGAAAATC 20 20 50.0 50.0 57.9 58.0 6.0 0.0 0.060846 125646 125765 277-304 0.253731 61.7 ycf1_p2 ycf1 2 AGTTCAGTCTCCATTCCCCA GCGCCCAAAGGAAGAAAATC 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.048501 125646 125765 646-673 0.208955 60.0 ycf1_p3 ycf1 3 AGTTCAGTCTCCATTCCCCA GAAGAAGTGCAAGTGGGACA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.077474 125646 125765 836-863 0.119403 54.0 ycf1_p4 ycf1 4 TCTGCTATTTCTATCCGCGC GCGCCCAAAGGAAGAAAATC 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.069701 125646 125765 280-280 0.089552 44.2 ycf1_p5 ycf1 5 CTGCTATTTCTATCCGCGCT GCGCCCAAAGGAAGAAAATC 20 20 50.0 50.0 57.9 58.0 5.6 0.0 0.075397 125646 125765 279-279 0.089552 44.1