primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnK-UUU-rps16_p1 trnK-UUU-rps16 1 AAAGCCGAGTACTCTACCGT GGAGCTCAACCTACAGGAAC 20 20 50.0 55.0 58.2 57.6 20.3 17.2 0.556730 4878 5680 911-936 1.000000 79.5 trnK-UUU-rps16_p2 trnK-UUU-rps16 2 AAGCCGAGTACTCTACCGTT GGAGCTCAACCTACAGGAAC 20 20 50.0 55.0 58.2 57.6 20.3 17.2 0.556730 4878 5680 910-935 1.000000 79.5 trnK-UUU-rps16_p3 trnK-UUU-rps16 3 CCGCACTTAAAAGCCGAGTA GGAGCTCAACCTACAGGAAC 20 20 50.0 55.0 58.3 57.6 5.3 17.2 0.671116 4878 5680 920-945 1.000000 78.5 trnK-UUU-rps16_p4 trnK-UUU-rps16 4 AAAGCCGAGTACTCTACCGT ATTTCAAAGAAGGCGGAGGT 20 20 50.0 45.0 58.2 57.4 20.3 0.0 0.755068 4878 5680 881-906 1.000000 78.0 trnK-UUU-rps16_p5 trnK-UUU-rps16 5 AAGCCGAGTACTCTACCGTT ATTTCAAAGAAGGCGGAGGT 20 20 50.0 45.0 58.2 57.4 20.3 0.0 0.755068 4878 5680 880-905 1.000000 78.0 rps16-trnQ-UUG_p1 rps16-trnQ-UUG 1 ATCATGTCGTTCAAGTCGCA GAGGTTCGAATCCTTCCGTC 20 20 45.0 55.0 57.9 58.1 0.0 16.9 0.154950 6779 8352 1653-1765 1.000000 84.6 rps16-trnQ-UUG_p2 rps16-trnQ-UUG 2 AAGTCGCACGTTGCTTTCTA GAGGTTCGAATCCTTCCGTC 20 20 45.0 55.0 58.1 58.1 8.1 16.9 0.215425 6779 8352 1641-1753 1.000000 84.2 rps16-trnQ-UUG_p3 rps16-trnQ-UUG 3 ATCATGTCGTTCAAGTCGCA CTCGGAGGTTCGAATCCTTC 20 20 45.0 55.0 57.9 57.8 0.0 16.9 0.290201 6779 8352 1657-1769 1.000000 83.5 rps16-trnQ-UUG_p4 rps16-trnQ-UUG 4 AAGTCGCACGTTGCTTTCTA CTCGGAGGTTCGAATCCTTC 20 20 45.0 55.0 58.1 57.8 8.1 16.9 0.350677 6779 8352 1645-1757 1.000000 83.1 rps16-trnQ-UUG_p5 rps16-trnQ-UUG 5 ATCATGTCGTTCAAGTCGCA CGGTAAGGCAACAGGTTTTG 20 20 45.0 50.0 57.9 57.6 0.0 0.0 0.494546 6779 8352 1686-1798 1.000000 81.9 trnQ-UUG-psbK_p1 trnQ-UUG-psbK 1 GAATTAGCCTGGGACGGAAG GGGCAATTTGGCGAAGAAAA 20 20 55.0 45.0 58.0 57.8 0.0 15.8 0.207392 8425 8764 491-511 1.000000 84.7 trnQ-UUG-psbK_p2 trnQ-UUG-psbK 2 GAAGGATTCGAACCTCCGAG GGGCAATTTGGCGAAGAAAA 20 20 55.0 45.0 57.8 57.8 16.4 15.8 0.373672 8425 8764 475-495 1.000000 83.6 trnQ-UUG-psbK_p3 trnQ-UUG-psbK 3 CAAAACCTGTTGCCTTACCG GGGCAATTTGGCGAAGAAAA 20 20 50.0 45.0 57.6 57.8 0.0 15.8 0.578017 8425 8764 446-466 1.000000 82.4 trnQ-UUG-psbK_p4 trnQ-UUG-psbK 4 AGGATTCGAACCTCCGAGTA GGGCAATTTGGCGAAGAAAA 20 20 50.0 45.0 57.6 57.8 11.3 15.8 0.594273 8425 8764 473-493 1.000000 81.9 trnQ-UUG-psbK_p5 trnQ-UUG-psbK 5 AGAATTAGCCTGGGACGGAA GGGCAATTTGGCGAAGAAAA 20 20 50.0 45.0 58.4 57.8 0.0 15.8 0.582260 8425 8764 492-512 1.000000 81.7 trnS-GCU-trnG-UCC_p1 trnS-GCU-trnG-UCC 1 GCTTTAGTCCACTCAGCCAT TGAATCAAACCGAAAGATCCCT 20 22 50.0 40.9 57.6 57.7 0.9 0.0 2.711020 9690 10581 968-1085 1.000000 65.0 trnS-GCU-trnG-UCC_p2 trnS-GCU-trnG-UCC 2 AGTCCACTCAGCCATCTCTC TGAATCAAACCGAAAGATCCCT 20 22 55.0 40.9 58.5 57.7 0.0 0.0 2.817034 9690 10581 963-1080 1.000000 64.1 trnS-GCU-trnG-UCC_p3 trnS-GCU-trnG-UCC 3 TAGTCCACTCAGCCATCTCT TGAATCAAACCGAAAGATCCCT 20 22 50.0 40.9 57.2 57.7 0.0 0.0 3.137708 9690 10581 964-1081 1.000000 61.6 trnS-GCU-trnG-UCC_p4 trnS-GCU-trnG-UCC 4 GCTTTAGTCCACTCAGCCAT TGAATCAAACCGAAAGATCCC 20 21 50.0 42.9 57.6 56.2 0.9 0.0 3.179768 9690 10581 968-1085 1.000000 61.2 trnS-GCU-trnG-UCC_p5 trnS-GCU-trnG-UCC 5 AGTCCACTCAGCCATCTCTC TGAATCAAACCGAAAGATCCC 20 21 55.0 42.9 58.5 56.2 0.0 0.0 3.285782 9690 10581 963-1080 1.000000 60.4 petN-psbM_p1 petN-psbM 1 CTTGGGCGGCTTTAATGGTA TGCTACTGCACTGTTCATTCT 20 21 50.0 42.9 58.2 57.6 9.6 0.0 1.649741 30871 31883 1147-1163 1.000000 68.7 petN-psbM_p2 petN-psbM 2 TTGGGCGGCTTTAATGGTAG TGCTACTGCACTGTTCATTCT 20 21 50.0 42.9 58.2 57.6 9.6 0.0 1.649741 30871 31883 1146-1162 1.000000 68.7 petN-psbM_p3 petN-psbM 3 GGCGGCTTTAATGGTAGTCT TGCTACTGCACTGTTCATTCT 20 21 50.0 42.9 57.7 57.6 0.0 0.0 1.734623 30871 31883 1143-1159 1.000000 68.1 petN-psbM_p4 petN-psbM 4 ATGGGGAAGAAGTGGACTCT TGCTACTGCACTGTTCATTCT 20 21 50.0 42.9 57.6 57.6 0.0 0.0 1.758286 30871 31883 1098-1114 1.000000 68.0 petN-psbM_p5 petN-psbM 5 TAGTAAGTCTTGCTTGGGCG TGCTACTGCACTGTTCATTCT 20 21 50.0 42.9 57.6 57.6 8.6 0.0 1.787507 30871 31883 1159-1175 1.000000 67.6 ycf3-trnS-GGA_p1 ycf3-trnS-GGA 1 TGCCTCCTTTTCTCCTGAAG CCCTCGGTAAACAAAAGCCT 20 20 50.0 50.0 57.1 58.1 0.0 0.0 0.961472 47337 48104 906-940 1.000000 77.0 ycf3-trnS-GGA_p2 ycf3-trnS-GGA 2 GCCTCCTTTTCTCCTGAAGT CCCTCGGTAAACAAAAGCCT 20 20 50.0 50.0 57.1 58.1 0.0 0.0 0.963464 47337 48104 905-939 1.000000 77.0 ycf3-trnS-GGA_p3 ycf3-trnS-GGA 3 TGCCTCCTTTTCTCCTGAAG ACGGAAAGAGAGGGATTCGA 20 20 50.0 50.0 57.1 58.2 0.0 0.0 1.018457 47337 48104 927-961 1.000000 76.5 ycf3-trnS-GGA_p4 ycf3-trnS-GGA 4 GCCTCCTTTTCTCCTGAAGT ACGGAAAGAGAGGGATTCGA 20 20 50.0 50.0 57.1 58.2 0.0 0.0 1.020450 47337 48104 926-960 1.000000 76.5 ycf3-trnS-GGA_p5 ycf3-trnS-GGA 5 TGCCTCCTTTTCTCCTGAAG TTCCAATGCTACGCCTTGAA 20 20 50.0 45.0 57.1 57.8 0.0 5.6 1.059773 47337 48104 877-911 1.000000 76.2 trnF-GAA-ndhJ_p1 trnF-GAA-ndhJ 1 GGGATAGCTCAGCTGGTAGA ATCCACGCCTGAAACGTATC 20 20 55.0 50.0 58.0 58.1 10.3 0.0 0.066573 51019 51669 578-830 1.000000 84.6 trnF-GAA-ndhJ_p2 trnF-GAA-ndhJ 2 CCTCGTGTCACCAGTTCAAA ATCCACGCCTGAAACGTATC 20 20 50.0 50.0 58.1 58.1 0.0 0.0 0.115963 51019 51669 542-794 1.000000 84.3 trnF-GAA-ndhJ_p3 trnF-GAA-ndhJ 3 CTGGTAGAGCAGAGGACTGA ATCCACGCCTGAAACGTATC 20 20 55.0 50.0 57.9 58.1 2.5 0.0 0.200366 51019 51669 566-818 1.000000 83.6 trnF-GAA-ndhJ_p4 trnF-GAA-ndhJ 4 GTGAATGGTCGGGATAGCTC ATCCACGCCTGAAACGTATC 20 20 55.0 50.0 57.8 58.1 0.0 0.0 0.220411 51019 51669 588-840 1.000000 83.4 trnF-GAA-ndhJ_p5 trnF-GAA-ndhJ 5 GGGATAGCTCAGCTGGTAGA ATGCCTGAAAGTTGGATCGG 20 20 55.0 50.0 58.0 58.2 10.3 0.0 0.247326 51019 51669 555-807 1.000000 83.2 atpB-rbcL_p1 atpB-rbcL 1 TACCGGGCCAATGATTTGAG GCCTTGAATCCAACACTTGC 20 20 50.0 50.0 57.9 57.9 6.3 0.0 0.121596 57319 58072 864-895 1.000000 82.1 atpB-rbcL_p2 atpB-rbcL 2 GGGGGAAAAGCTACATCCAG GCCTTGAATCCAACACTTGC 20 20 55.0 50.0 57.9 57.9 12.8 0.0 0.128854 57319 58072 884-915 1.000000 82.0 atpB-rbcL_p3 atpB-rbcL 3 TACCGGGCCAATGATTTGAG CCAGCCTTGAATCCAACACT 20 20 50.0 50.0 57.9 58.1 6.3 0.0 0.136193 57319 58072 867-898 1.000000 82.0 atpB-rbcL_p4 atpB-rbcL 4 GGGGGAAAAGCTACATCCAG CCAGCCTTGAATCCAACACT 20 20 55.0 50.0 57.9 58.1 12.8 0.0 0.143452 57319 58072 887-918 1.000000 81.9 atpB-rbcL_p5 atpB-rbcL 5 ATACGCCCCAGGTTTCTTTC GCCTTGAATCCAACACTTGC 20 20 50.0 50.0 57.9 57.9 0.0 0.0 0.194539 57319 58072 842-873 1.000000 81.6 petA-psbJ_p1 petA-psbJ 1 ATTACGTGTCCAAGGGCTTC GGCTCATATTCTGGGTTGGG 20 20 50.0 55.0 57.9 58.0 0.0 0.0 0.122542 66050 67180 1252-1307 1.000000 85.5 petA-psbJ_p2 petA-psbJ 2 GAGAAGGTTCAATTGGCCGA GGCTCATATTCTGGGTTGGG 20 20 50.0 55.0 58.2 58.0 5.4 0.0 0.191901 66050 67180 1170-1225 1.000000 85.1 petA-psbJ_p3 petA-psbJ 3 CATTACGTGTCCAAGGGCTT GGCTCATATTCTGGGTTGGG 20 20 50.0 55.0 58.2 58.0 0.0 0.0 0.191901 66050 67180 1253-1308 1.000000 84.9 petA-psbJ_p4 petA-psbJ 4 ATTACGTGTCCAAGGGCTTC TGATCGGTTCAATGGGCATT 20 20 50.0 45.0 57.9 57.9 0.0 0.0 0.251781 66050 67180 1281-1336 1.000000 84.5 petA-psbJ_p5 petA-psbJ 5 GTCCAAGGGCTTCTGTTCTT GGCTCATATTCTGGGTTGGG 20 20 50.0 55.0 57.7 58.0 0.0 0.0 0.291450 66050 67180 1245-1300 1.000000 84.2 psbF-psbE_p1 psbF-psbE 1 AACAGCCAACCATCTCACTG ATAACTGGCCGTTTCGATCC 20 20 50.0 50.0 58.1 58.1 0.0 16.2 0.148944 67699 67707 117-117 1.000000 79.5 psbF-psbE_p2 psbF-psbE 2 GTGAACAGCCAACCATCTCA ATAACTGGCCGTTTCGATCC 20 20 50.0 50.0 58.1 58.1 0.0 16.2 0.154315 67699 67707 120-120 1.000000 79.4 psbF-psbE_p3 psbF-psbE 3 TGAACAGCCAACCATCTCAC ATAACTGGCCGTTTCGATCC 20 20 50.0 50.0 58.1 58.1 0.0 16.2 0.154315 67699 67707 119-119 1.000000 79.4 psbF-psbE_p4 psbF-psbE 4 AACAGCCAACCATCTCACTG ACCGACAGGGGATTCCATTA 20 20 50.0 50.0 58.1 58.1 0.0 4.8 0.210612 67699 67707 137-137 1.000000 78.9 psbF-psbE_p5 psbF-psbE 5 TGAACAGCCAACCATCTCAC ACCGACAGGGGATTCCATTA 20 20 50.0 50.0 58.1 58.1 0.0 4.8 0.215983 67699 67707 139-139 1.000000 78.8 ycf2_p1 ycf2 1 ACGGAGGAACAATATCACCA AGAACCAGAAGCGATGTGAA 20 20 45.0 45.0 56.2 57.2 0.0 0.0 2.600074 92521 92640 240-243 1.000000 66.8 ycf2_p2 ycf2 2 AACGGAGGAACAATATCACCA AGAACCAGAAGCGATGTGAA 21 20 42.9 45.0 57.0 57.2 0.0 0.0 2.832429 92521 92640 241-244 1.000000 64.9 ycf2_p3 ycf2 3 TCAACGGAGGAACAATATCACC AGAACCAGAAGCGATGTGAA 22 20 45.5 45.0 58.1 57.2 0.0 0.0 2.970421 92521 92640 243-246 1.000000 63.7 ycf2_p4 ycf2 4 ACGGAGGAACAATATCACCAT AGAACCAGAAGCGATGTGAA 21 20 42.9 45.0 56.8 57.2 0.0 0.0 3.053608 92521 92640 240-243 1.000000 63.2 ycf2_p5 ycf2 5 ACGGAGGAACAATATCACCA AGAACCAGAAGCGATGTGAAT 20 21 45.0 42.9 56.2 57.7 0.0 0.0 3.101403 92521 92640 240-243 1.000000 62.8 trnL-CAA-trnV-GAC_p1 trnL-CAA-trnV-GAC 1 GTCTCGCGTGTCTACCATTT CGGGGGAGCAAGTCAAAATA 20 20 50.0 50.0 58.0 57.9 5.8 0.0 0.130614 96642 98199 1675-1819 1.000000 83.9 trnL-CAA-trnV-GAC_p2 trnL-CAA-trnV-GAC 2 CTCGCGTGTCTACCATTTCA CGGGGGAGCAAGTCAAAATA 20 20 50.0 50.0 58.0 57.9 5.8 0.0 0.131984 96642 98199 1673-1817 1.000000 83.9 trnL-CAA-trnV-GAC_p3 trnL-CAA-trnV-GAC 3 GTCTCGCGTGTCTACCATTT GATGACTTCCACCACGTCAA 20 20 50.0 50.0 58.0 57.8 5.8 0.0 0.171648 96642 98199 1614-1758 1.000000 83.6 trnL-CAA-trnV-GAC_p4 trnL-CAA-trnV-GAC 4 CTCGCGTGTCTACCATTTCA GATGACTTCCACCACGTCAA 20 20 50.0 50.0 58.0 57.8 5.8 0.0 0.173019 96642 98199 1612-1756 1.000000 83.6 trnL-CAA-trnV-GAC_p5 trnL-CAA-trnV-GAC 5 GTCTCGCGTGTCTACCATTT ATGACTTCCACCACGTCAAG 20 20 50.0 50.0 58.0 57.8 5.8 0.0 0.177663 96642 98199 1613-1757 1.000000 83.5 ndhF-rpl32_p1 ndhF-rpl32 1 AACAAGCAGGAGTCCCAATC GTACGTTTCTTTGGAACCGC 20 20 50.0 50.0 57.8 57.7 5.2 0.0 0.511828 109757 111039 986-1398 1.000000 82.3 ndhF-rpl32_p2 ndhF-rpl32 2 GAACAAGCAGGAGTCCCAAT GTACGTTTCTTTGGAACCGC 20 20 50.0 50.0 57.8 57.7 5.2 0.0 0.511828 109757 111039 987-1399 1.000000 82.3 ndhF-rpl32_p3 ndhF-rpl32 3 AAGCAGGAGTCCCAATCCTA GTACGTTTCTTTGGAACCGC 20 20 50.0 50.0 57.7 57.7 5.2 0.0 0.575686 109757 111039 983-1395 1.000000 81.8 ndhF-rpl32_p4 ndhF-rpl32 4 AGCAGGAGTCCCAATCCTAT GTACGTTTCTTTGGAACCGC 20 20 50.0 50.0 57.5 57.7 5.2 0.0 0.809121 109757 111039 982-1394 1.000000 79.9 ndhF-rpl32_p5 ndhF-rpl32 5 CTTTTTGTTGCCGTCGGAAC GTACGTTTCTTTGGAACCGC 20 20 50.0 50.0 58.5 57.7 17.5 0.0 0.832262 109757 111039 1003-1415 1.000000 79.7 rpl32-trnL-UAG_p1 rpl32-trnL-UAG 1 TGGACCGCAGTAAAAGCTTT TCCTAAGAGCAGCGTGTCTA 20 20 45.0 50.0 58.0 57.9 5.7 0.0 0.148618 111199 112751 1594-1738 1.000000 85.1 rpl32-trnL-UAG_p2 rpl32-trnL-UAG 2 TTGGACCGCAGTAAAAGCTT TCCTAAGAGCAGCGTGTCTA 20 20 45.0 50.0 58.0 57.9 0.0 0.0 0.148618 111199 112751 1595-1739 1.000000 85.1 rpl32-trnL-UAG_p3 rpl32-trnL-UAG 3 TGGACCGCAGTAAAAGCTTT AGCAGCGTGTCTACCAATTT 20 20 45.0 45.0 58.0 57.8 5.7 0.0 0.209344 111199 112751 1587-1731 1.000000 84.6 rpl32-trnL-UAG_p4 rpl32-trnL-UAG 4 TTGGACCGCAGTAAAAGCTT AGCAGCGTGTCTACCAATTT 20 20 45.0 45.0 58.0 57.8 0.0 0.0 0.209344 111199 112751 1588-1732 1.000000 84.6 rpl32-trnL-UAG_p5 rpl32-trnL-UAG 5 TGGACCGCAGTAAAAGCTTT CTAAGAGCAGCGTGTCTACC 20 20 45.0 55.0 58.0 57.8 5.7 0.0 0.220635 111199 112751 1592-1736 1.000000 84.5 psaC-ndhE_p1 psaC-ndhE 1 CAGGCTCGTACACATTGAGT TCAACTCGTATCAATCAATCT 20 21 50.0 33.3 57.6 52.4 0.0 0.0 6.958284 116055 116339 381-386 1.000000 48.1 psaC-ndhE_p2 psaC-ndhE 2 CAATACATCTGTGGGGCAGG TCAACTCGTATCAATCAATCT 20 21 55.0 33.3 58.3 52.4 0.0 0.0 6.904060 116055 116339 397-402 1.000000 47.8 psaC-ndhE_p3 psaC-ndhE 3 CCAATACATCTGTGGGGCAG TCAACTCGTATCAATCAATCT 20 21 55.0 33.3 58.3 52.4 0.0 0.0 6.904060 116055 116339 398-403 1.000000 47.8 psaC-ndhE_p4 psaC-ndhE 4 ACATCCGTCCCAAGGTATCA TCAACTCGTATCAATCAATCT 20 21 50.0 33.3 58.1 52.4 0.0 0.0 6.713873 116055 116339 421-426 1.000000 47.4 psaC-ndhE_p5 psaC-ndhE 5 AGCTTTACATCCGTCCCAAG TCAACTCGTATCAATCAATCT 20 21 50.0 33.3 57.6 52.4 0.0 0.0 6.991255 116055 116339 427-432 1.000000 47.3 ndhA_p1 ndhA 1 GCATAGGGAACATATCGTGGA GCAAATTCTTCCTCAGCTGG 21 20 47.6 50.0 57.3 57.1 0.0 15.1 2.613537 118433 120598 2336-2394 1.000000 61.2 ndhA_p2 ndhA 2 AGCATAGGGAACATATCGTGG GCAAATTCTTCCTCAGCTGG 21 20 47.6 50.0 57.3 57.1 0.0 15.1 2.620620 118433 120598 2337-2395 1.000000 61.1 ndhA_p3 ndhA 3 TCCATTCAGCATAGGGAACA GCAAATTCTTCCTCAGCTGG 20 20 45.0 50.0 56.2 57.1 0.0 15.1 2.730023 118433 120598 2344-2402 1.000000 60.2 ndhA_p4 ndhA 4 TCTCTTGCTTCAGAGAGGTT GCAAATTCTTCCTCAGCTGG 20 20 45.0 50.0 55.8 57.1 6.7 15.1 3.139558 118433 120598 2289-2347 1.000000 57.0 ndhA_p5 ndhA 5 GCATAGGGAACATATCGTGGAT GCAAATTCTTCCTCAGCTGG 22 20 45.5 50.0 57.8 57.1 0.0 15.1 3.143372 118433 120598 2336-2394 1.000000 56.9 trnV-GAC-rps12_p1 trnV-GAC-rps12 1 CGGGGGAGCAAGTCAAAATA TGGCAACTTTACGTAAGGCA 20 20 50.0 45.0 57.9 57.7 0.0 16.5 0.380474 137032 138804 1879-2059 0.733333 71.0 trnV-GAC-rps12_p2 trnV-GAC-rps12 2 GATGACTTCCACCACGTCAA TGGCAACTTTACGTAAGGCA 20 20 50.0 45.0 57.8 57.7 0.0 16.5 0.421509 137032 138804 1818-1998 0.733333 70.8 trnV-GAC-rps12_p3 trnV-GAC-rps12 3 AACTGATGACTTCCACCACG TGGCAACTTTACGTAAGGCA 20 20 50.0 45.0 57.8 57.7 0.0 16.5 0.427523 137032 138804 1822-2002 0.733333 70.7 trnV-GAC-rps12_p4 trnV-GAC-rps12 4 ATGACTTCCACCACGTCAAG TGGCAACTTTACGTAAGGCA 20 20 50.0 45.0 57.8 57.7 0.0 16.5 0.427523 137032 138804 1817-1997 0.733333 70.7 trnV-GAC-rps12_p5 trnV-GAC-rps12 5 CTGATGACTTCCACCACGTC TGGCAACTTTACGTAAGGCA 20 20 55.0 45.0 58.3 57.7 0.0 16.5 0.542896 137032 138804 1820-2000 0.733333 69.8