primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score ycf1_p1 ycf1 1 ACACTCGGAATATTTCATTCGGA TGGGCGCGTTGGAATTATAA 23 20 39.1 45.0 58.0 58.0 0.0 8.4 3.058357 114910 115029 421-421 0.500000 35.5 ycf1_p2 ycf1 2 ACACTCGGAATATTTCATTCGGA TTGGGCGCGTTGGAATTATA 23 20 39.1 45.0 58.0 58.0 0.0 8.4 3.058357 114910 115029 422-422 0.500000 35.5 ycf1_p3 ycf1 3 ACACTCGGAATATTTCATTCGGA ATCGATCTTAACCCAGGCCT 23 20 39.1 50.0 58.0 58.2 0.0 0.0 3.210725 114910 115029 588-588 0.500000 34.3 ycf1_p4 ycf1 4 ACACTCGGAATATTTCATTCGGA GGATCACCGGGCATATCAAA 23 20 39.1 50.0 58.0 57.7 0.0 6.3 3.288891 114910 115029 452-452 0.500000 33.7 ycf1_p5 ycf1 5 ACACTCGGAATATTTCATTCGG TGGGCGCGTTGGAATTATAA 22 20 40.9 45.0 56.6 58.0 0.0 8.4 3.445129 114910 115029 421-421 0.500000 32.4 ycf1-rps15_p1 ycf1-rps15 1 TGAATTGGAATGGCGTCGAT AGTCGTTGACGTTTTCCCAA 20 20 45.0 45.0 58.0 58.0 0.0 3.2 0.063961 116777 117172 829-829 0.500000 59.5 ycf1-rps15_p2 ycf1-rps15 2 TGAATTGGAATGGCGTCGAT GCCTAATTGTTCGGGTCCAT 20 20 45.0 50.0 58.0 57.9 0.0 0.0 0.089740 116777 117172 1303-1303 0.500000 59.3 ycf1-rps15_p3 ycf1-rps15 3 TGAATTGGAATGGCGTCGAT ATGAGTCGAAGAACACCGTG 20 20 45.0 50.0 58.0 57.9 0.0 0.0 0.102950 116777 117172 1119-1119 0.500000 59.2 ycf1-rps15_p4 ycf1-rps15 4 TGAATTGGAATGGCGTCGAT CCAACGTGTTACATAGGGCA 20 20 45.0 50.0 58.0 57.9 0.0 0.0 0.139027 116777 117172 1243-1243 0.500000 58.9 ycf1-rps15_p5 ycf1-rps15 5 TGAATTGGAATGGCGTCGAT AGCTATCCGACTCAACTCCA 20 20 45.0 50.0 58.0 57.9 0.0 0.0 0.182354 116777 117172 1369-1369 0.500000 58.5 ndhH_p1 ndhH 1 TTGGGAAAACGTCAACGACT GAAGTCCAACAGGAGCAACA 20 20 45.0 50.0 58.0 58.0 9.9 0.0 0.059685 117556 118737 1843-1843 0.500000 59.5 ndhH_p2 ndhH 2 TTGGGAAAACGTCAACGACT CACCAATGCTAAGATCGGCT 20 20 45.0 50.0 58.0 58.0 9.9 9.1 0.067962 117556 118737 1798-1798 0.500000 59.5 ndhH_p3 ndhH 3 TTGGGAAAACGTCAACGACT ATTCAGGTCCGATACGTTGC 20 20 45.0 50.0 58.0 58.1 9.9 0.0 0.091071 117556 118737 1603-1603 0.500000 59.3 ndhH_p4 ndhH 4 TTGGGAAAACGTCAACGACT GGAGCAACACTTGAAATGGC 20 20 45.0 50.0 58.0 57.9 9.9 0.0 0.097265 117556 118737 1832-1832 0.500000 59.2 ndhH_p5 ndhH 5 TTGGGAAAACGTCAACGACT AAAGGGCCAGCATATTCAGG 20 20 45.0 50.0 58.0 57.9 9.9 6.2 0.104691 117556 118737 1616-1616 0.500000 59.2 ndhA_p1 ndhA 1 GTGAGAGTTGAAGCCCCAAA TCAAAGTGTATTCGGCCTCG 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.023326 118739 120953 2680-2680 0.500000 59.8 ndhA_p2 ndhA 2 GCAACGAGAAGGGGATTCAT TCAAAGTGTATTCGGCCTCG 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.048705 118739 120953 2909-2909 0.500000 59.6 ndhA_p3 ndhA 3 CAGGCTCTGGAAGGAATTCC TCAAAGTGTATTCGGCCTCG 20 20 55.0 50.0 58.0 58.0 17.3 0.0 0.054471 118739 120953 2833-2833 0.500000 59.6 ndhA_p4 ndhA 4 GTGAGAGTTGAAGCCCCAAA CGTGGGACAGGGTAATCATG 20 20 50.0 55.0 58.0 58.0 0.0 0.0 0.065185 118739 120953 2598-2598 0.500000 59.5 ndhA_p5 ndhA 5 GCAACGAGAAGGGGATTCAT CGTGGGACAGGGTAATCATG 20 20 50.0 55.0 58.0 58.0 0.0 0.0 0.090564 118739 120953 2827-2827 0.500000 59.3 ndhI_p1 ndhI 1 CGATGGGCACAGTGATGTTA TCCATCTCCTACGGTCCAAA 20 20 50.0 50.0 58.0 57.8 4.1 0.0 0.264045 121038 121541 1868-1868 0.500000 57.9 ndhI_p2 ndhI 2 CGATGGGCACAGTGATGTTA TTCCATCTCCTACGGTCCAA 20 20 50.0 50.0 58.0 57.8 4.1 0.0 0.264045 121038 121541 1869-1869 0.500000 57.9 ndhI_p3 ndhI 3 GATGGACTTTACCGAGGCTG TCCATCTCCTACGGTCCAAA 20 20 55.0 50.0 58.1 57.8 0.0 0.0 0.299956 121038 121541 1414-1414 0.500000 57.6 ndhI_p4 ndhI 4 GATGGACTTTACCGAGGCTG TTCCATCTCCTACGGTCCAA 20 20 55.0 50.0 58.1 57.8 0.0 0.0 0.299956 121038 121541 1415-1415 0.500000 57.6 ndhI_p5 ndhI 5 AGATGGACTTTACCGAGGCT TCCATCTCCTACGGTCCAAA 20 20 50.0 50.0 58.1 57.8 0.0 0.0 0.373918 121038 121541 1415-1415 0.500000 57.0 ndhI-ndhG_p1 ndhI-ndhG 1 CGAGGCCGAATACACTTTGA TCCATCTCCTACGGTCCAAA 20 20 50.0 50.0 58.0 57.8 0.0 0.0 0.245863 121542 121954 1052-1052 0.500000 58.0 ndhI-ndhG_p2 ndhI-ndhG 2 CGAGGCCGAATACACTTTGA TTCCATCTCCTACGGTCCAA 20 20 50.0 50.0 58.0 57.8 0.0 0.0 0.245863 121542 121954 1053-1053 0.500000 58.0 ndhI-ndhG_p3 ndhI-ndhG 3 CATGATTACCCTGTCCCACG TCCATCTCCTACGGTCCAAA 20 20 55.0 50.0 58.0 57.8 0.0 0.0 0.287722 121542 121954 1134-1134 0.500000 57.7 ndhI-ndhG_p4 ndhI-ndhG 4 CATGATTACCCTGTCCCACG TTCCATCTCCTACGGTCCAA 20 20 55.0 50.0 58.0 57.8 0.0 0.0 0.287722 121542 121954 1135-1135 0.500000 57.7 ndhI-ndhG_p5 ndhI-ndhG 5 GATGGACTTTACCGAGGCTG TCCATCTCCTACGGTCCAAA 20 20 55.0 50.0 58.1 57.8 0.0 0.0 0.299956 121542 121954 1414-1414 0.500000 57.6 ndhG-ndhE_p1 ndhG-ndhE 1 CTATTTTGTAGCTGCTGCGC CGTGGAGCAGAAGCAATTTG 20 20 50.0 50.0 57.9 58.0 13.4 0.0 0.123661 122486 122644 1214-1214 0.500000 59.0 ndhG-ndhE_p2 ndhG-ndhE 2 CTATTTTGTAGCTGCTGCGC TCGTGGAGCAGAAGCAATTT 20 20 50.0 45.0 57.9 58.1 13.4 0.0 0.200579 122486 122644 1215-1215 0.500000 58.4 ndhG-ndhE_p3 ndhG-ndhE 3 CTATTTTGTAGCTGCTGCGC TTCGTGGAGCAGAAGCAATT 20 20 50.0 45.0 57.9 58.1 13.4 0.0 0.200579 122486 122644 1216-1216 0.500000 58.4 ndhG-ndhE_p4 ndhG-ndhE 4 CTATTTTGTAGCTGCTGCGC AGAAATCAGTTGGACAGGCG 20 20 50.0 50.0 57.9 58.2 13.4 0.0 0.283286 122486 122644 1270-1270 0.500000 57.7 ndhG-ndhE_p5 ndhG-ndhE 5 GCCTTTTCCTTGGGATTGGT CGTGGAGCAGAAGCAATTTG 20 20 50.0 50.0 58.4 58.0 0.0 0.0 0.382353 122486 122644 1273-1273 0.500000 56.9 ndhE_p1 ndhE 1 CTATTTTGTAGCTGCTGCGC CGTGGAGCAGAAGCAATTTG 20 20 50.0 50.0 57.9 58.0 13.4 0.0 0.123661 122645 122950 1214-1214 0.500000 59.0 ndhE_p2 ndhE 2 CTATTTTGTAGCTGCTGCGC TCGTGGAGCAGAAGCAATTT 20 20 50.0 45.0 57.9 58.1 13.4 0.0 0.200579 122645 122950 1215-1215 0.500000 58.4 ndhE_p3 ndhE 3 CTATTTTGTAGCTGCTGCGC TTCGTGGAGCAGAAGCAATT 20 20 50.0 45.0 57.9 58.1 13.4 0.0 0.200579 122645 122950 1216-1216 0.500000 58.4 ndhE_p4 ndhE 4 CTATTTTGTAGCTGCTGCGC GAGCACAGGTTTGTCGGTAA 20 20 50.0 50.0 57.9 58.1 13.4 0.0 0.223101 122645 122950 1389-1389 0.500000 58.2 ndhE_p5 ndhE 5 CTATTTTGTAGCTGCTGCGC AGAAATCAGTTGGACAGGCG 20 20 50.0 50.0 57.9 58.2 13.4 0.0 0.283286 122645 122950 1270-1270 0.500000 57.7 ndhE-psaC_p1 ndhE-psaC 1 AGGTGCAATTGCTGTAGCTC CGTGGAGCAGAAGCAATTTG 20 20 50.0 50.0 58.5 58.0 29.4 0.0 0.569515 122951 123201 875-875 0.500000 55.4 ndhE-psaC_p2 ndhE-psaC 2 AGGTGCAATTGCTGTAGCTC AAGCCGCTAAAGTCGCTAAA 20 20 50.0 45.0 58.5 57.9 29.4 0.0 0.631603 122951 123201 1421-1421 0.500000 54.9 ndhE-psaC_p3 ndhE-psaC 3 AGGTGCAATTGCTGTAGCTC TCGTGGAGCAGAAGCAATTT 20 20 50.0 45.0 58.5 58.1 29.4 0.0 0.646434 122951 123201 876-876 0.500000 54.8 ndhE-psaC_p4 ndhE-psaC 4 AGGTGCAATTGCTGTAGCTC TTCGTGGAGCAGAAGCAATT 20 20 50.0 45.0 58.5 58.1 29.4 0.0 0.646434 122951 123201 877-877 0.500000 54.8 ndhE-psaC_p5 ndhE-psaC 5 AGGTGCAATTGCTGTAGCTC GAGCACAGGTTTGTCGGTAA 20 20 50.0 50.0 58.5 58.1 29.4 0.0 0.668956 122951 123201 1050-1050 0.500000 54.6 psaC_p1 psaC 1 AGGTGCAATTGCTGTAGCTC AAGAGAAAAACGGAACCCCC 20 20 50.0 50.0 58.5 58.0 29.4 0.0 0.551533 123202 123447 1644-1644 0.500000 55.6 psaC_p2 psaC 2 AGGTGCAATTGCTGTAGCTC AGTAAAAGGTCCCGGGATGA 20 20 50.0 50.0 58.5 58.0 29.4 29.7 0.581521 123202 123447 1515-1515 0.500000 55.3 psaC_p3 psaC 3 AGGTGCAATTGCTGTAGCTC AAGCCGCTAAAGTCGCTAAA 20 20 50.0 45.0 58.5 57.9 29.4 0.0 0.631603 123202 123447 1421-1421 0.500000 54.9 psaC_p4 psaC 4 AGGTGCAATTGCTGTAGCTC CCCCTGCCGTGTACAAAATA 20 20 50.0 50.0 58.5 57.9 29.4 0.0 0.659481 123202 123447 1628-1628 0.500000 54.7 psaC_p5 psaC 5 AGGTGCAATTGCTGTAGCTC GAGCACAGGTTTGTCGGTAA 20 20 50.0 50.0 58.5 58.1 29.4 0.0 0.668956 123202 123447 1050-1050 0.500000 54.6 ndhD_p1 ndhD 1 CAAATTGCTTCTGCTCCACG CATTGTATGAACCAGCGTGC 20 20 50.0 50.0 58.0 57.8 0.0 0.0 0.205336 123566 125068 1956-1956 0.500000 58.4 ndhD_p2 ndhD 2 CAAATTGCTTCTGCTCCACG GCATTGTATGAACCAGCGTG 20 20 50.0 50.0 58.0 57.8 0.0 0.0 0.205336 123566 125068 1957-1957 0.500000 58.4 ndhD_p3 ndhD 3 CAAATTGCTTCTGCTCCACG ATTCTGCAATTGTAGCGGCT 20 20 50.0 45.0 58.0 58.2 0.0 17.8 0.271682 123566 125068 2103-2103 0.500000 57.8 ndhD_p4 ndhD 4 AATTGCTTCTGCTCCACGAA CATTGTATGAACCAGCGTGC 20 20 45.0 50.0 58.1 57.8 0.0 0.0 0.282254 123566 125068 1954-1954 0.500000 57.7 ndhD_p5 ndhD 5 AATTGCTTCTGCTCCACGAA GCATTGTATGAACCAGCGTG 20 20 45.0 50.0 58.1 57.8 0.0 0.0 0.282254 123566 125068 1955-1955 0.500000 57.7 ndhD-ccsA_p1 ndhD-ccsA 1 TATCTTGACGAAATGGGCGG ACCCAAGGCTTTGCTACTTC 20 20 50.0 50.0 58.1 58.1 0.0 2.4 0.140838 125069 125299 1275-1275 0.500000 58.9 ndhD-ccsA_p2 ndhD-ccsA 2 TGACGAAATGGGCGGAATAG ACCCAAGGCTTTGCTACTTC 20 20 50.0 50.0 58.1 58.1 0.0 2.4 0.140838 125069 125299 1270-1270 0.500000 58.9 ndhD-ccsA_p3 ndhD-ccsA 3 TATCTTGACGAAATGGGCGG CCCAAGGCTTTGCTACTTCA 20 20 50.0 50.0 58.1 58.1 0.0 2.4 0.142196 125069 125299 1274-1274 0.500000 58.9 ndhD-ccsA_p4 ndhD-ccsA 4 TGACGAAATGGGCGGAATAG CCCAAGGCTTTGCTACTTCA 20 20 50.0 50.0 58.1 58.1 0.0 2.4 0.142196 125069 125299 1269-1269 0.500000 58.9 ndhD-ccsA_p5 ndhD-ccsA 5 TGACGAAATGGGCGGAATAG GCTCTTCAATCCGAGTGGTT 20 20 50.0 50.0 58.1 57.9 0.0 0.0 0.152500 125069 125299 1207-1207 0.500000 58.8 ccsA_p1 ccsA 1 TATCTTGACGAAATGGGCGG GTGAAATCGGTAGACACGCT 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.059726 125300 126241 1773-1773 0.500000 59.5 ccsA_p2 ccsA 2 TGACGAAATGGGCGGAATAG GTGAAATCGGTAGACACGCT 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.059726 125300 126241 1768-1768 0.500000 59.5 ccsA_p3 ccsA 3 TATCTTGACGAAATGGGCGG TGAAATCGGTAGACACGCTG 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.061097 125300 126241 1772-1772 0.500000 59.5 ccsA_p4 ccsA 4 TGACGAAATGGGCGGAATAG TGAAATCGGTAGACACGCTG 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.061097 125300 126241 1767-1767 0.500000 59.5 ccsA_p5 ccsA 5 TTTTTGATTCTGGACCGCGA GTGAAATCGGTAGACACGCT 20 20 45.0 50.0 58.1 58.0 8.2 0.0 0.122270 125300 126241 1490-1490 0.500000 59.0 trnL(UAG)-rpl32_p1 trnL(UAG)-rpl32 1 AGCGTGTCTACCGATTTCAC CTCCTTTGAAATAGGCCCGT 20 20 50.0 50.0 58.0 57.6 0.0 0.0 0.427889 126425 127304 1613-1613 0.500000 56.6 trnL(UAG)-rpl32_p2 trnL(UAG)-rpl32 2 CAGCGTGTCTACCGATTTCA CTCCTTTGAAATAGGCCCGT 20 20 50.0 50.0 58.0 57.6 0.0 0.0 0.429259 126425 127304 1614-1614 0.500000 56.6 trnL(UAG)-rpl32_p3 trnL(UAG)-rpl32 3 AGCGTGTCTACCGATTTCAC TGAGCAGTGAATCAAACGGG 20 20 50.0 50.0 58.0 58.5 0.0 0.0 0.485162 126425 127304 1579-1579 0.500000 56.1 trnL(UAG)-rpl32_p4 trnL(UAG)-rpl32 4 CAGCGTGTCTACCGATTTCA TGAGCAGTGAATCAAACGGG 20 20 50.0 50.0 58.0 58.5 0.0 0.0 0.486532 126425 127304 1580-1580 0.500000 56.1 trnL(UAG)-rpl32_p5 trnL(UAG)-rpl32 5 GAAGTAGCAAAGCCTTGGGT CTCCTTTGAAATAGGCCCGT 20 20 50.0 50.0 58.1 57.6 0.0 0.0 0.509001 126425 127304 2111-2111 0.500000 55.9 rpl32_p1 rpl32 1 ACTCCCCACCTTGGAATAGA CTCCTTTGAAATAGGCCCGT 20 20 50.0 50.0 57.3 57.6 0.0 0.0 1.081235 127305 127472 953-953 0.500000 51.4 rpl32_p2 rpl32 2 ACTCCCCACCTTGGAATAGA TGAGCAGTGAATCAAACGGG 20 20 50.0 50.0 57.3 58.5 0.0 0.0 1.138508 127305 127472 919-919 0.500000 50.9 rpl32_p3 rpl32 3 ACTCCCCACCTTGGAATAGA GCAGTGAATCAAACGGGGAT 20 20 50.0 50.0 57.3 58.5 0.0 0.0 1.197502 127305 127472 916-916 0.500000 50.4 rpl32_p4 rpl32 4 ACTCCCCACCTTGGAATAGA TCTCCTTTGAAATAGGCCCG 20 20 50.0 50.0 57.3 57.3 0.0 0.0 1.371272 127305 127472 954-954 0.500000 49.0 rpl32_p5 rpl32 5 ACTCCCCACCTTGGAATAGAA CTCCTTTGAAATAGGCCCGT 21 20 47.6 50.0 58.1 57.6 0.0 0.0 1.490758 127305 127472 953-953 0.500000 48.1 rpl32-ndhF_p1 rpl32-ndhF 1 ACTCCCCACCTTGGAATAGA AACGGGTCGTGTAAACCAAA 20 20 50.0 45.0 57.3 58.0 0.0 0.0 0.696706 127473 128238 1693-1693 0.500000 54.4 rpl32-ndhF_p2 rpl32-ndhF 2 ACTCCCCACCTTGGAATAGA ACGGGTCGTGTAAACCAAAA 20 20 50.0 45.0 57.3 58.0 0.0 0.0 0.696706 127473 128238 1692-1692 0.500000 54.4 rpl32-ndhF_p3 rpl32-ndhF 3 ACTCCCCACCTTGGAATAGA TGGGTCGATCAAGTATCCGA 20 20 50.0 50.0 57.3 57.9 0.0 0.0 0.722686 127473 128238 1456-1456 0.500000 54.2 rpl32-ndhF_p4 rpl32-ndhF 4 ACTCCCCACCTTGGAATAGA TCTGAAAAGCCCACATACGG 20 20 50.0 50.0 57.3 57.9 0.0 0.0 0.769126 127473 128238 1313-1313 0.500000 53.8 rpl32-ndhF_p5 rpl32-ndhF 5 ACTCCCCACCTTGGAATAGA GTGGGTCGATCAAGTATCCG 20 20 50.0 55.0 57.3 57.9 0.0 0.0 0.796840 127473 128238 1457-1457 0.500000 53.6 ndhF_p1 ndhF 1 ACGGGCCTATTTCAAAGGAG ATGGAATCGACCATTTCGCT 20 20 50.0 45.0 57.6 57.7 0.8 1.8 0.752122 128239 130461 2778-2778 0.500000 54.0 ndhF_p2 ndhF 2 CCCGTTTGATTCACTGCTCA ATGGAATCGACCATTTCGCT 20 20 50.0 45.0 58.5 57.7 0.0 1.8 0.809395 128239 130461 2812-2812 0.500000 53.5 ndhF_p3 ndhF 3 ATCCCCGTTTGATTCACTGC ATGGAATCGACCATTTCGCT 20 20 50.0 45.0 58.5 57.7 0.0 1.8 0.868389 128239 130461 2815-2815 0.500000 53.1 ndhF_p4 ndhF 4 ACGGGCCTATTTCAAAGGAG TGAACTGGACAATCAGTGGG 20 20 50.0 50.0 57.6 57.4 0.8 0.0 0.986892 128239 130461 2577-2577 0.500000 52.1 ndhF_p5 ndhF 5 ACGGGCCTATTTCAAAGGAG GAACTGGACAATCAGTGGGT 20 20 50.0 50.0 57.6 57.4 0.8 0.0 0.988681 128239 130461 2576-2576 0.500000 52.1