primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score psbA_p1 psbA 1 TTGCTCCATTCCTTCAACGA GTGCTTGGGAGTCCTTGAAA 20 20 45.0 50.0 57.4 58.0 0.0 9.6 0.578441 111 1172 1149-1149 1.000000 75.4 psbA_p2 psbA 2 TTGCTCCATTCCTTCAACGA AATACGTGTGCTTGGGAGTC 20 20 45.0 50.0 57.4 57.9 0.0 0.0 0.654460 111 1172 1156-1156 1.000000 74.8 psbA_p3 psbA 3 TGCTCCATTCCTTCAACGAT GTGCTTGGGAGTCCTTGAAA 20 20 45.0 50.0 57.2 58.0 0.0 9.6 0.806216 111 1172 1148-1148 1.000000 73.6 psbA_p4 psbA 4 TGCTCCATTCCTTCAACGAT AATACGTGTGCTTGGGAGTC 20 20 45.0 50.0 57.2 57.9 0.0 0.0 0.882235 111 1172 1155-1155 1.000000 72.9 psbA_p5 psbA 5 TGCTCCATTCCTTCAACGATT GTGCTTGGGAGTCCTTGAAA 21 20 42.9 50.0 57.9 58.0 0.0 9.6 1.090617 111 1172 1148-1148 1.000000 71.3 rps16-trnQ-UUG_p1 rps16-trnQ-UUG 1 CAGCCGATCATGTCCTTCAA GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 58.0 58.1 0.0 16.9 0.104521 5914 7015 1192-1193 1.000000 79.4 rps16-trnQ-UUG_p2 rps16-trnQ-UUG 2 GCCGATCATGTCCTTCAAGT GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 58.0 58.1 0.0 16.9 0.105939 5914 7015 1190-1191 1.000000 79.4 rps16-trnQ-UUG_p3 rps16-trnQ-UUG 3 AATCCACAGCCGATCATGTC GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 58.0 58.1 0.0 16.9 0.117059 5914 7015 1198-1199 1.000000 79.3 rps16-trnQ-UUG_p4 rps16-trnQ-UUG 4 GAATCCACAGCCGATCATGT GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 58.0 58.1 0.0 16.9 0.117059 5914 7015 1199-1200 1.000000 79.3 rps16-trnQ-UUG_p5 rps16-trnQ-UUG 5 CAGCCGATCATGTCCTTCAA GAAATTCGAAATGGGGCGTG 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.120355 5914 7015 1251-1252 1.000000 79.3 trnS-GCU-trnG-UCC_p1 trnS-GCU-trnG-UCC 1 ATTAGCAATCCGCCGCTTTA AACGGAAAGACCCCTTAACT 20 20 45.0 45.0 58.0 56.4 0.0 0.0 1.674622 8342 9565 1329-1340 1.000000 67.4 trnS-GCU-trnG-UCC_p2 trnS-GCU-trnG-UCC 2 AGAAGAAGCGGAGAGAGAGG AACGGAAAGACCCCTTAACT 20 20 55.0 45.0 58.2 56.4 0.0 0.0 1.873708 8342 9565 1385-1396 1.000000 65.8 trnS-GCU-trnG-UCC_p3 trnS-GCU-trnG-UCC 3 ATTAGCAATCCGCCGCTTTA AAACGGAAAGACCCCTTAACT 20 21 45.0 42.9 58.0 57.1 0.0 0.0 1.908745 8342 9565 1330-1341 1.000000 65.6 trnS-GCU-trnG-UCC_p4 trnS-GCU-trnG-UCC 4 CGGAGAGAGAGGGATTCGAA AACGGAAAGACCCCTTAACT 20 20 55.0 45.0 58.3 56.4 0.0 0.0 1.954878 8342 9565 1377-1388 1.000000 65.2 trnS-GCU-trnG-UCC_p5 trnS-GCU-trnG-UCC 5 GCTTTAGTCCACTCAGCCAT AACGGAAAGACCCCTTAACT 20 20 50.0 45.0 57.6 56.4 0.9 0.0 2.046364 8342 9565 1315-1326 1.000000 64.5 atpF_p1 atpF 1 ACTAATTTCGTCGGCTCGAA AGAACTCTGTTCTTTGTTAGTCCT 20 24 45.0 37.5 57.4 57.5 9.6 7.1 5.129437 12278 13635 1512-1517 1.000000 40.5 atpF_p2 atpF 2 ACTAATTTCGTCGGCTCGAA AGTCCTATCTATAAGAGGAGAGCA 20 24 45.0 41.7 57.4 57.3 9.6 0.0 5.354252 12278 13635 1494-1499 1.000000 40.5 atpF_p3 atpF 3 GGCTCGAAGGGTTACCATTA AGAACTCTGTTCTTTGTTAGTCCT 20 24 50.0 37.5 57.0 57.5 0.0 7.1 5.481484 12278 13635 1500-1505 1.000000 40.5 atpF_p4 atpF 4 ACTAATTTCGTCGGCTCGAA AGAACTCTGTTCTTTGTTAGTCC 20 23 45.0 39.1 57.4 56.2 9.6 7.1 5.482017 12278 13635 1512-1517 1.000000 40.5 atpF_p5 atpF 5 ACTAATTTCGTCGGCTCGAA GAACTCTGTTCTTTGTTAGTCCT 20 23 45.0 39.1 57.4 56.2 9.6 3.5 5.482017 12278 13635 1511-1516 1.000000 40.5 rpoC1_p1 rpoC1 1 GAGAGACCCGAATCCCTACA TTGCTCGTTCGAGAACTACG 20 20 55.0 50.0 57.9 58.0 0.0 23.5 0.109087 21532 24339 2979-2987 1.000000 79.2 rpoC1_p2 rpoC1 2 AGAGACCCGAATCCCTACAG TTGCTCGTTCGAGAACTACG 20 20 55.0 50.0 57.9 58.0 0.0 23.5 0.114982 21532 24339 2978-2986 1.000000 79.2 rpoC1_p3 rpoC1 3 TGAAACTGGAGAGACCCGAA TTGCTCGTTCGAGAACTACG 20 20 50.0 50.0 58.3 58.0 0.0 23.5 0.328197 21532 24339 2987-2995 1.000000 77.5 rpoC1_p4 rpoC1 4 GAGAGACCCGAATCCCTACA GCTCGTTCGAGAACTACGAT 20 20 55.0 50.0 57.9 57.5 0.0 23.5 0.524129 21532 24339 2977-2985 1.000000 75.9 rpoC1_p5 rpoC1 5 AGAGACCCGAATCCCTACAG GCTCGTTCGAGAACTACGAT 20 20 55.0 50.0 57.9 57.5 0.0 23.5 0.530023 21532 24339 2976-2984 1.000000 75.9 petN-psbM_p1 petN-psbM 1 GTCTCACTTGGGCTGCTTTA TGCTACTGCACTGTTCATTCT 20 21 50.0 42.9 57.8 57.6 0.0 0.0 1.592428 30018 30790 929-944 1.000000 68.5 petN-psbM_p2 petN-psbM 2 ACTTGGGCTGCTTTAATGGT TGCTACTGCACTGTTCATTCT 20 21 45.0 42.9 57.7 57.6 0.0 0.0 1.716560 30018 30790 924-939 1.000000 67.5 petN-psbM_p3 petN-psbM 3 ATGGGGAAGAAGTGGACTCT TGCTACTGCACTGTTCATTCT 20 21 50.0 42.9 57.6 57.6 0.0 0.0 1.758286 30018 30790 874-889 1.000000 67.2 petN-psbM_p4 petN-psbM 4 GTAAGTCTCACTTGGGCTGC TGCTACTGCACTGTTCATTCT 20 21 55.0 42.9 58.6 57.6 0.0 0.0 1.963622 30018 30790 933-948 1.000000 65.5 petN-psbM_p5 petN-psbM 5 TAAGTCTCACTTGGGCTGCT TGCTACTGCACTGTTCATTCT 20 21 50.0 42.9 58.6 57.6 0.0 0.0 2.055340 30018 30790 932-947 1.000000 64.7 trnT-GGU-psbD_p1 trnT-GGU-psbD 1 AACGGGCCCTTTTAACTCAG ACAAAAACGAAACGGTCCCT 20 20 50.0 45.0 58.1 58.2 22.4 0.0 0.340432 32919 33957 1208-1222 1.000000 77.5 trnT-GGU-psbD_p2 trnT-GGU-psbD 2 GCCCTTTTAACTCAGCGGTA ACAAAAACGAAACGGTCCCT 20 20 50.0 45.0 57.9 58.2 0.0 0.0 0.349607 32919 33957 1203-1217 1.000000 77.5 trnT-GGU-psbD_p3 trnT-GGU-psbD 3 AACGGGCCCTTTTAACTCAG CCCTCCGTAACCAATCATCC 20 20 50.0 55.0 58.1 57.7 22.4 0.0 0.350480 32919 33957 1192-1206 1.000000 77.5 trnT-GGU-psbD_p4 trnT-GGU-psbD 4 GCCCTTTTAACTCAGCGGTA CCCTCCGTAACCAATCATCC 20 20 50.0 55.0 57.9 57.7 0.0 0.0 0.359654 32919 33957 1187-1201 1.000000 77.4 trnT-GGU-psbD_p5 trnT-GGU-psbD 5 AACGGGCCCTTTTAACTCAG GCCAGACCAGCCTACAAAAA 20 20 50.0 50.0 58.1 58.4 22.4 0.0 0.478204 32919 33957 1221-1235 1.000000 76.4 ycf3-trnS-UGA_p1 ycf3-trnS-UGA 1 TTCTCCTGAAGTTGTCGGAA CCCTCGGTAAACAAAAGCCT 20 20 45.0 50.0 56.4 58.1 0.0 0.0 1.678533 45465 46084 783-783 1.000000 66.8 ycf3-trnS-UGA_p2 ycf3-trnS-UGA 2 TTTCTCCTGAAGTTGTCGGA CCCTCGGTAAACAAAAGCCT 20 20 45.0 50.0 56.4 58.1 0.0 0.0 1.678533 45465 46084 784-784 1.000000 66.8 ycf3-trnS-UGA_p3 ycf3-trnS-UGA 3 TTCTCCTGAAGTTGTCGGAA ACGGAAAGAGAGGGATTCGA 20 20 45.0 50.0 56.4 58.2 0.0 0.0 1.735519 45465 46084 804-804 1.000000 66.3 ycf3-trnS-UGA_p4 ycf3-trnS-UGA 4 TTTCTCCTGAAGTTGTCGGA ACGGAAAGAGAGGGATTCGA 20 20 45.0 50.0 56.4 58.2 0.0 0.0 1.735519 45465 46084 805-805 1.000000 66.3 ycf3-trnS-UGA_p5 ycf3-trnS-UGA 5 TTCTCCTGAAGTTGTCGGAA TTCCAATGCTACGCCTTGAA 20 20 45.0 45.0 56.4 57.8 0.0 5.6 1.776834 45465 46084 754-754 1.000000 66.0 trnT-UGU-trnL-UAA_p1 trnT-UGU-trnL-UAA 1 AAAGCCAGCTATCGGAATCG ACCAATTTCGCCATATCCCC 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.133544 47463 48465 1098-1115 1.000000 79.2 trnT-UGU-trnL-UAA_p2 trnT-UGU-trnL-UAA 2 AAAGCCAGCTATCGGAATCG TAGCGTCTACCAATTTCGCC 20 20 50.0 50.0 58.1 58.1 0.0 0.0 0.198352 47463 48465 1106-1123 1.000000 78.7 trnT-UGU-trnL-UAA_p3 trnT-UGU-trnL-UAA 3 GGAATCGAACCGATGACCAT ACCAATTTCGCCATATCCCC 20 20 50.0 50.0 57.8 58.0 15.5 0.0 0.245117 47463 48465 1085-1102 1.000000 78.3 trnT-UGU-trnL-UAA_p4 trnT-UGU-trnL-UAA 4 TCTAACCCCTGAGCTAAGCA ACCAATTTCGCCATATCCCC 20 20 50.0 50.0 57.8 58.0 0.0 0.0 0.252323 47463 48465 1046-1063 1.000000 78.3 trnT-UGU-trnL-UAA_p5 trnT-UGU-trnL-UAA 5 GGAATCGAACCGATGACCAT TAGCGTCTACCAATTTCGCC 20 20 50.0 50.0 57.8 58.1 15.5 0.0 0.309926 47463 48465 1093-1110 1.000000 77.8 trnF-GAA-ndhJ_p1 trnF-GAA-ndhJ 1 CCTCGTGTCACCAGTTCAAA TGAAAGTTGGATAGGCTGGC 20 20 50.0 50.0 58.1 57.9 0.0 0.0 0.180666 49470 50221 862-862 1.000000 78.8 trnF-GAA-ndhJ_p2 trnF-GAA-ndhJ 2 CCTCGTGTCACCAGTTCAAA ATAGGCTGGCCCTTACGTAA 20 20 50.0 50.0 58.1 58.2 0.0 7.9 0.254575 49470 50221 852-852 1.000000 78.2 trnF-GAA-ndhJ_p3 trnF-GAA-ndhJ 3 GGAAATGGTCGGGATAGCTC TGAAAGTTGGATAGGCTGGC 20 20 55.0 50.0 57.8 57.9 0.0 0.0 0.300111 49470 50221 908-908 1.000000 77.9 trnF-GAA-ndhJ_p4 trnF-GAA-ndhJ 4 AATGGTCGGGATAGCTCAGT TGAAAGTTGGATAGGCTGGC 20 20 50.0 50.0 58.2 57.9 0.0 0.0 0.334056 49470 50221 905-905 1.000000 77.6 trnF-GAA-ndhJ_p5 trnF-GAA-ndhJ 5 ATGGTCGGGATAGCTCAGTT TGAAAGTTGGATAGGCTGGC 20 20 50.0 50.0 58.2 57.9 0.0 0.0 0.334056 49470 50221 904-904 1.000000 77.6 accD-psaI_p1 accD-psaI 1 CCACGGTTTCTTTCCCTTGA CCATTGCAATTGCCGGAAAT 20 20 50.0 45.0 58.0 58.0 0.0 26.9 0.051344 60371 61220 958-960 1.000000 80.3 accD-psaI_p2 accD-psaI 2 TCCACGGTTTCTTTCCCTTG CCATTGCAATTGCCGGAAAT 20 20 50.0 45.0 58.0 58.0 0.0 26.9 0.051344 60371 61220 959-961 1.000000 80.3 accD-psaI_p3 accD-psaI 3 CCACGGTTTCTTTCCCTTGA AAGAAGCCATTGCAATTGCC 20 20 50.0 45.0 58.0 57.9 0.0 26.8 0.127877 60371 61220 964-966 1.000000 79.7 accD-psaI_p4 accD-psaI 4 TCCACGGTTTCTTTCCCTTG AAGAAGCCATTGCAATTGCC 20 20 50.0 45.0 58.0 57.9 0.0 26.8 0.127877 60371 61220 965-967 1.000000 79.7 accD-psaI_p5 accD-psaI 5 TCAGCTCCACGGTTTCTTTC CCATTGCAATTGCCGGAAAT 20 20 50.0 45.0 58.1 58.0 0.0 26.9 0.148050 60371 61220 964-966 1.000000 79.6 rpl22-rps19_p1 rpl22-rps19 1 CGTCCGCGAATCTGATCAAT TCTGACTTTCGCGAGACATG 20 20 50.0 50.0 58.5 58.0 8.2 9.6 0.525718 85830 85882 218-218 1.000000 78.0 rpl22-rps19_p2 rpl22-rps19 2 CGTCCGCGAATCTGATCAAT CCTACTCTGACTTTCGCGAG 20 20 50.0 55.0 58.5 57.8 8.2 9.6 0.689756 85830 85882 223-223 1.000000 76.6 rpl22-rps19_p3 rpl22-rps19 3 CGTCCGCGAATCTGATCAAT CTCTGACTTTCGCGAGACAT 20 20 50.0 50.0 58.5 57.7 8.2 9.6 0.778605 85830 85882 219-219 1.000000 76.0 rpl22-rps19_p4 rpl22-rps19 4 CGTCCGCGAATCTGATCAAT CAAATTGGGAGAATTCGCGC 20 20 50.0 50.0 58.5 58.5 8.2 17.5 0.959344 85830 85882 242-242 1.000000 74.3 rpl22-rps19_p5 rpl22-rps19 5 CGTCCGCGAATCTGATCAAT TTCGCGAGACATGCAAGAAA 20 20 50.0 45.0 58.5 58.5 8.2 9.6 1.000768 85830 85882 211-211 1.000000 74.3 rpl32-trnL-UAG_p1 rpl32-trnL-UAG 1 GGTTTCTACCGGACATTCAA AGCGTGTCTACCGATTTCAC 20 20 45.0 50.0 55.4 58.0 9.5 0.0 2.630573 115650 116445 889-889 1.000000 59.4 rpl32-trnL-UAG_p2 rpl32-trnL-UAG 2 GGTTTCTACCGGACATTCAA CAGCGTGTCTACCGATTTCA 20 20 45.0 50.0 55.4 58.0 9.5 0.0 2.631944 115650 116445 890-890 1.000000 59.4 rpl32-trnL-UAG_p3 rpl32-trnL-UAG 3 GGTTTCTACCGGACATTCAA TCCTAAGAGCAGCGTGTCTA 20 20 45.0 50.0 55.4 57.9 9.5 0.0 2.747020 115650 116445 899-899 1.000000 58.5 rpl32-trnL-UAG_p4 rpl32-trnL-UAG 4 GGTTTCTACCGGACATTCAA CCTAAGAGCAGCGTGTCTAC 20 20 45.0 55.0 55.4 57.8 9.5 0.0 2.819038 115650 116445 898-898 1.000000 57.9 rpl32-trnL-UAG_p5 rpl32-trnL-UAG 5 GGTTTCTACCGGACATTCAA CTAAGAGCAGCGTGTCTACC 20 20 45.0 55.0 55.4 57.8 9.5 0.0 2.819038 115650 116445 897-897 1.000000 57.9 ndhD_p1 ndhD 1 TGCATTGTACAGCGAACGAT ATTCGCGGGTTCCTCAATTT 20 20 45.0 45.0 58.3 58.2 0.0 6.1 0.445007 117790 119202 1540-1540 1.000000 76.4 ndhD_p2 ndhD 2 TTTGCATTGTACAGCGAACG ATTCGCGGGTTCCTCAATTT 20 20 45.0 45.0 57.7 58.2 5.8 6.1 0.474159 117790 119202 1542-1542 1.000000 76.2 ndhD_p3 ndhD 3 TGCATTGTACAGCGAACGAT GATATTCGCGGGTTCCTCAA 20 20 45.0 50.0 58.3 57.8 0.0 6.1 0.513495 117790 119202 1543-1543 1.000000 75.9 ndhD_p4 ndhD 4 TTTGCATTGTACAGCGAACG GATATTCGCGGGTTCCTCAA 20 20 45.0 50.0 57.7 57.8 5.8 6.1 0.542647 117790 119202 1545-1545 1.000000 75.7 ndhD_p5 ndhD 5 TTGCATTGTACAGCGAACGA ATTCGCGGGTTCCTCAATTT 20 20 45.0 45.0 58.5 58.2 0.0 6.1 0.662518 117790 119202 1541-1541 1.000000 74.7 ndhD-psaC_p1 ndhD-psaC 1 TGGATCGTCCAATTGGAAATGA AACCGAGGACTGTGTAGGTT 22 20 40.9 50.0 58.0 58.3 28.6 0.0 2.324853 119203 119413 416-416 1.000000 62.7 ndhD-psaC_p2 ndhD-psaC 2 TGGATCGTCCAATTGGAAATGA AAGAGATGTGAATCCGCCTG 22 20 40.9 50.0 58.0 57.7 28.6 0.0 2.360506 119203 119413 394-394 1.000000 62.5 ndhD-psaC_p3 ndhD-psaC 3 TGGATCGTCCAATTGGAAATGA AGAACCGAGGACTGTGTAGG 22 20 40.9 55.0 58.0 58.5 28.6 0.0 2.491190 119203 119413 418-418 1.000000 61.4 ndhD-psaC_p4 ndhD-psaC 4 TGGATCGTCCAATTGGAAATGA ATGAAACAACTCGCAGCATG 22 20 40.9 45.0 58.0 57.4 28.6 0.0 2.662467 119203 119413 336-336 1.000000 60.4 ndhD-psaC_p5 ndhD-psaC 5 TGGATCGTCCAATTGGAAATGA CATGAAACAACTCGCAGCAT 22 20 40.9 45.0 58.0 57.4 28.6 0.0 2.662467 119203 119413 337-337 1.000000 60.4 psaC-ndhE_p1 psaC-ndhE 1 ACATCCGTCCCAAGGTATCA CTGAAGCAGCTATTGGGCTA 20 20 50.0 50.0 58.1 57.4 0.0 0.0 0.753385 119660 120311 769-846 1.000000 78.6 psaC-ndhE_p2 psaC-ndhE 2 ACATCCGTCCCAAGGTATCA TGAAGCAGCTATTGGGCTAG 20 20 50.0 50.0 58.1 57.4 0.0 0.0 0.753385 119660 120311 768-845 1.000000 78.6 psaC-ndhE_p3 psaC-ndhE 3 ACATCCGTCCCAAGGTATCA TGTTATAGCTGTTGCGGCTG 20 20 50.0 50.0 58.1 58.6 0.0 12.2 0.757229 119660 120311 789-866 1.000000 78.5 psaC-ndhE_p4 psaC-ndhE 4 ACATCCGTCCCAAGGTATCA GAAGCAGCTATTGGGCTAGC 20 20 50.0 55.0 58.1 58.8 0.0 6.0 0.891951 119660 120311 767-844 1.000000 77.5 psaC-ndhE_p5 psaC-ndhE 5 CAATACATCTGTGGGGCAGG TGAAGCAGCTATTGGGCTAG 20 20 55.0 50.0 58.3 57.4 0.0 0.0 0.943571 119660 120311 744-821 1.000000 77.1 ycf1_p1 ycf1 1 TCGGTTCGACAATCAATATTCCT ACAATTACGCGAGATCAGACA 23 21 39.1 42.9 58.0 57.5 0.0 15.9 4.522366 127035 127184 306-306 1.000000 45.1 ycf1_p2 ycf1 2 TCGGTTCGACAATCAATATTCC ACAATTACGCGAGATCAGACA 22 21 40.9 42.9 56.6 57.5 0.0 15.9 4.900784 127035 127184 306-306 1.000000 42.1 ycf1_p3 ycf1 3 CGGTTCGACAATCAATATTCCT ACAATTACGCGAGATCAGACA 22 21 40.9 42.9 56.6 57.5 0.0 15.9 4.909137 127035 127184 305-305 1.000000 42.0 ycf1_p4 ycf1 4 TCGGTTCGACAATCAATATTCCT ACAATTACGCGAGATCAGACAT 23 22 39.1 40.9 58.0 58.0 0.0 15.9 5.065477 127035 127184 306-306 1.000000 41.3 ycf1_p5 ycf1 5 TCGGTTCGACAATCAATATTCCT GACAATTACGCGAGATCAGAC 23 21 39.1 47.6 58.0 56.9 0.0 15.9 5.110529 127035 127184 307-307 1.000000 41.3