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clpP-psbB

LSC · 79071-79581 · 511 bp

Back to Hydnocarpus

Pi 0.0196

MarkerSeek score 64.30

Primer available yes

Label clpP-psbB

Feature Metadata

label_name: clpP-psbB
feature_type: igs
region: LSC
length_bp: 511
variable_sites: 10
pi: 0.0196
unique_haplotype_count: 2
primer_available: yes
alignment_reliability: 1.00
markerseek_score: 64.30

Pi Curve

Haplotype Network

Species Separation

Primer Ranking

Primer ID	fwd_seq	rev_seq	fwd_gc	rev_gc	fwd_tm	rev_tm	amplicon_size	cross_species_success_rate	primer_score
clpP-psbB_p1	TGAATCGTCTTCCCCAGGAT	CGATACCAAGGCAAACCCAT	50.0	50.0	58.1	58.2	585 bp	1.0	78.5
clpP-psbB_p2	TGAATCGTCTTCCCCAGGAT	CAAACGACCGGGATCATTCA	50.0	50.0	58.1	58.3	622 bp	1.0	78.2
clpP-psbB_p3	TGAATCGTCTTCCCCAGGAT	AGCAACCAAAGCTGTATGCA	50.0	45.0	58.1	58.4	658 bp	1.0	77.2
clpP-psbB_p4	TTGAATCGTCTTCCCCAGGA	CGATACCAAGGCAAACCCAT	50.0	50.0	58.3	58.2	586 bp	1.0	76.7
clpP-psbB_p5	TGAATCGTCTTCCCCAGGAT	ACACGATACCAAGGCAAACC	50.0	50.0	58.1	58.5	588 bp	1.0	76.6