primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnH-GUG-psbA_p1 trnH-GUG-psbA 1 TCACAATCCACTGCCTTGAG GCTCCAGCGACAAATGGATA 20 20 50.0 50.0 57.8 58.0 0.0 0.0 0.236035 103 572 529-530 1.000000 78.4 trnH-GUG-psbA_p2 trnH-GUG-psbA 2 TCACAATCCACTGCCTTGAG CCTCTAGACCTAGCTGCTGT 20 20 50.0 55.0 57.8 57.9 0.0 13.4 0.255492 103 572 553-554 1.000000 78.2 trnH-GUG-psbA_p3 trnH-GUG-psbA 3 TCACAATCCACTGCCTTGAG TTCCCTCTAGACCTAGCTGC 20 20 50.0 55.0 57.8 57.9 0.0 0.0 0.264322 103 572 556-557 1.000000 78.2 trnH-GUG-psbA_p4 trnH-GUG-psbA 4 TCACAATCCACTGCCTTGAG TAGACCTAGCTGCTGTCGAA 20 20 50.0 50.0 57.8 57.9 0.0 13.4 0.313871 103 572 549-550 1.000000 77.8 trnH-GUG-psbA_p5 trnH-GUG-psbA 5 TATATGATGGGCGAACGACG GCTCCAGCGACAAATGGATA 20 20 50.0 50.0 57.7 58.0 0.0 0.0 0.387759 103 572 574-575 1.000000 77.2 trnK-UUU-rps16_p1 trnK-UUU-rps16 1 TCTACCAACGGTATGGACGA AAAAAGGCGCTCAACCTACA 20 20 50.0 45.0 57.9 58.0 10.6 7.6 0.151611 4503 5464 1150-1156 1.000000 79.2 trnK-UUU-rps16_p2 trnK-UUU-rps16 2 AAAGCCGAGTACTCTACCGT AAAAAGGCGCTCAACCTACA 20 20 50.0 45.0 58.2 58.0 20.3 7.6 0.192760 4503 5464 1085-1091 1.000000 78.9 trnK-UUU-rps16_p3 trnK-UUU-rps16 3 AAGCCGAGTACTCTACCGTT AAAAAGGCGCTCAACCTACA 20 20 50.0 45.0 58.2 58.0 20.3 7.6 0.192760 4503 5464 1084-1090 1.000000 78.9 trnK-UUU-rps16_p4 trnK-UUU-rps16 4 TCTAGCCGCACTTAAAAGCC AAAAAGGCGCTCAACCTACA 20 20 50.0 45.0 58.3 58.0 0.0 7.6 0.290178 4503 5464 1099-1105 1.000000 78.1 trnK-UUU-rps16_p5 trnK-UUU-rps16 5 CCGCACTTAAAAGCCGAGTA AAAAAGGCGCTCAACCTACA 20 20 50.0 45.0 58.3 58.0 5.3 7.6 0.307146 4503 5464 1094-1100 1.000000 78.0 rps16-trnQ-UUG_p1 rps16-trnQ-UUG 1 AAGTCGCACGTTGCTTTCTA GAGGTTCGAATCCTTCCGTC 20 20 45.0 55.0 58.1 58.1 8.1 16.9 0.215425 6606 7309 777-785 1.000000 78.4 rps16-trnQ-UUG_p2 rps16-trnQ-UUG 2 TCCACGACTGATCATGTCCT GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 58.1 58.1 15.3 16.9 0.223468 6606 7309 799-807 1.000000 78.3 rps16-trnQ-UUG_p3 rps16-trnQ-UUG 3 TCATGTCCTTCAAGTCGCAC GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 58.2 58.1 0.0 16.9 0.280333 6606 7309 788-796 1.000000 77.9 rps16-trnQ-UUG_p4 rps16-trnQ-UUG 4 AAGTCGCACGTTGCTTTCTA TAAGGCATCGGGTTTTGGTC 20 20 45.0 50.0 58.1 58.2 8.1 0.0 0.310345 6606 7309 807-815 1.000000 77.6 rps16-trnQ-UUG_p5 rps16-trnQ-UUG 5 TCCACGACTGATCATGTCCT TAAGGCATCGGGTTTTGGTC 20 20 50.0 50.0 58.1 58.2 15.3 0.0 0.318388 6606 7309 829-837 1.000000 77.5 trnS-GCU-trnG-UCC_p1 trnS-GCU-trnG-UCC 1 ATTAGCAATCCGCCGCTTTA ACGAATCACACTTTTACCACT 20 21 45.0 38.1 58.0 55.5 0.0 0.0 3.574049 8632 9367 809-810 1.000000 51.6 trnS-GCU-trnG-UCC_p2 trnS-GCU-trnG-UCC 2 ATTAGCAATCCGCCGCTTTA AGAACGAATCACACTTTTACCAC 20 23 45.0 39.1 58.0 57.3 0.0 0.0 3.706765 8632 9367 812-813 1.000000 50.5 trnS-GCU-trnG-UCC_p3 trnS-GCU-trnG-UCC 3 ATTAGCAATCCGCCGCTTTA GAACGAATCACACTTTTACCACT 20 23 45.0 39.1 58.0 57.3 0.0 0.0 3.706765 8632 9367 811-812 1.000000 50.5 trnS-GCU-trnG-UCC_p4 trnS-GCU-trnG-UCC 4 ATTAGCAATCCGCCGCTTTA AACGAATCACACTTTTACCACT 20 22 45.0 36.4 58.0 56.2 0.0 0.0 3.814520 8632 9367 810-811 1.000000 49.7 trnS-GCU-trnG-UCC_p5 trnS-GCU-trnG-UCC 5 ATTAGCAATCCGCCGCTTTA CAAATTGAAAGACCCCTTAACCA 20 23 45.0 39.1 58.0 57.2 0.0 0.0 3.838033 8632 9367 849-850 1.000000 49.5 atpH-atpI_p1 atpH-atpI 1 GGCAGAAACCAGTGGATTCA GCGAATCCATGGAAGGTCAT 20 20 50.0 50.0 58.1 58.0 28.1 20.7 0.117428 14077 14805 774-776 1.000000 79.4 atpH-atpI_p2 atpH-atpI 2 TACCTTGACCAACTCCAGGT GCGAATCCATGGAAGGTCAT 20 20 50.0 50.0 57.9 58.0 0.0 20.7 0.139407 14077 14805 841-843 1.000000 79.2 atpH-atpI_p3 atpH-atpI 3 GATACCTTCTACGGCTTGGC GCGAATCCATGGAAGGTCAT 20 20 55.0 50.0 58.1 58.0 0.0 20.7 0.159962 14077 14805 870-872 1.000000 79.0 atpH-atpI_p4 atpH-atpI 4 CGATACCTTCTACGGCTTGG GCGAATCCATGGAAGGTCAT 20 20 55.0 50.0 57.9 58.0 0.0 20.7 0.162792 14077 14805 871-873 1.000000 79.0 atpH-atpI_p5 atpH-atpI 5 AATAACGGAAGCGGCAGAAA GCGAATCCATGGAAGGTCAT 20 20 45.0 50.0 58.2 58.0 1.4 20.7 0.211053 14077 14805 786-788 1.000000 78.6 ycf3-trnS-GGA_p1 ycf3-trnS-GGA 1 CCATTTATCTGCGATCTAGGCA AACGTACGGAAAGAGAGGGA 22 20 45.5 50.0 58.1 58.1 0.0 21.1 2.154524 46226 47144 1034-1035 1.000000 62.9 ycf3-trnS-GGA_p2 ycf3-trnS-GGA 2 CCATTTATCTGCGATCTAGGCA CCCTCGGTAAACAAAAGCCT 22 20 45.5 50.0 58.1 58.1 0.0 0.0 2.164027 46226 47144 1008-1009 1.000000 62.8 ycf3-trnS-GGA_p3 ycf3-trnS-GGA 3 CCATTTATCTGCGATCTAGGCA ACGTACGGAAAGAGAGGGAT 22 20 45.5 50.0 58.1 57.9 0.0 21.1 2.210503 46226 47144 1033-1034 1.000000 62.5 ycf3-trnS-GGA_p4 ycf3-trnS-GGA 4 CCATTTATCTGCGATCTAGGCA ACGGAAAGAGAGGGATTCGA 22 20 45.5 50.0 58.1 58.2 0.0 0.0 2.221013 46226 47144 1029-1030 1.000000 62.4 ycf3-trnS-GGA_p5 ycf3-trnS-GGA 5 CCATTTATCTGCGATCTAGGCA TTCCAATGCTACGCCTTGAA 22 20 45.5 45.0 58.1 57.8 0.0 5.6 2.262328 46226 47144 979-980 1.000000 62.1 rps4-trnT-UGU_p1 rps4-trnT-UGU 1 TTCCGGGTCTAGGCCTTTTA CTCAGAGGTTAGAGCATCGC 20 20 50.0 55.0 58.0 57.9 12.6 0.0 0.177289 48136 48514 528-530 1.000000 78.9 rps4-trnT-UGU_p2 rps4-trnT-UGU 2 AGATCACTTCCGGGTCTAGG CTCAGAGGTTAGAGCATCGC 20 20 55.0 55.0 57.9 57.9 0.0 0.0 0.207469 48136 48514 535-537 1.000000 78.6 rps4-trnT-UGU_p3 rps4-trnT-UGU 3 TTCCGGGTCTAGGCCTTTTA ATGGTCATCGGTTCGATTCC 20 20 50.0 50.0 58.0 57.8 12.6 0.0 0.285042 48136 48514 496-498 1.000000 78.0 rps4-trnT-UGU_p4 rps4-trnT-UGU 4 AGATCACTTCCGGGTCTAGG ATGGTCATCGGTTCGATTCC 20 20 55.0 50.0 57.9 57.8 0.0 0.0 0.315222 48136 48514 503-505 1.000000 77.8 rps4-trnT-UGU_p5 rps4-trnT-UGU 5 TTCCGGGTCTAGGCCTTTTA TGTTATGTGAGCCCGCTTAG 20 20 50.0 50.0 58.0 57.7 12.6 0.0 0.354077 48136 48514 548-550 1.000000 77.5 ndhK_p1 ndhK 1 CCCGCCATTTGTTATTCTGC TCGTGCTTATCCCAATTGTTG 20 21 50.0 42.9 57.8 56.9 0.0 4.4 2.329125 51569 52336 837-837 1.000000 61.4 ndhK_p2 ndhK 2 ACGACCCTGCATCTTTTTGA TCGTGCTTATCCCAATTGTTG 20 21 45.0 42.9 57.7 56.9 0.0 4.4 2.391151 51569 52336 919-919 1.000000 60.9 ndhK_p3 ndhK 3 CCCGCCATTTGTTATTCTGC TTCGTGCTTATCCCAATTGTTG 20 22 50.0 40.9 57.8 57.6 0.0 4.4 2.641512 51569 52336 838-838 1.000000 58.9 ndhK_p4 ndhK 4 ACGACCCTGCATCTTTTTGA TTCGTGCTTATCCCAATTGTTG 20 22 45.0 40.9 57.7 57.6 0.0 4.4 2.703538 51569 52336 920-920 1.000000 58.4 ndhK_p5 ndhK 5 CCCGCCATTTGTTATTCTGC CGTGCTTATCCCAATTGTTG 20 20 50.0 45.0 57.8 55.3 0.0 4.4 2.866155 51569 52336 836-836 1.000000 57.1 atpB-rbcL_p1 atpB-rbcL 1 GGTGGAAAGGCTACATCCAG CACCAGCTTTGAATCCAACAC 20 21 55.0 47.6 58.0 58.0 14.7 0.0 1.061388 56111 56870 919-920 1.000000 71.6 atpB-rbcL_p2 atpB-rbcL 2 CATCCAGTACCGGACCAATG CACCAGCTTTGAATCCAACAC 20 21 55.0 47.6 58.0 58.0 9.5 0.0 1.063706 56111 56870 906-907 1.000000 71.6 atpB-rbcL_p3 atpB-rbcL 3 GGTGGAAAGGCTACATCCAG ACCAGCTTTGAATCCAACACT 20 21 55.0 42.9 58.0 58.1 14.7 0.0 1.094675 56111 56870 918-919 1.000000 71.3 atpB-rbcL_p4 atpB-rbcL 4 CATCCAGTACCGGACCAATG ACCAGCTTTGAATCCAACACT 20 21 55.0 42.9 58.0 58.1 9.5 0.0 1.096994 56111 56870 905-906 1.000000 71.3 atpB-rbcL_p5 atpB-rbcL 5 TTTGAGCAATACGACCCAGG CACCAGCTTTGAATCCAACAC 20 21 50.0 47.6 57.9 58.0 0.0 0.0 1.125215 56111 56870 885-886 1.000000 71.1 rps3_p1 rps3 1 CCATTGCTGGATAGAACGGA ACTGAAATGGGCTACTAGCG 20 20 50.0 50.0 57.4 57.4 0.0 1.9 1.224297 85097 85753 724-724 1.000000 70.3 rps3_p2 rps3 2 TCCATTGCTGGATAGAACGG ACTGAAATGGGCTACTAGCG 20 20 50.0 50.0 57.4 57.4 0.0 1.9 1.224297 85097 85753 725-725 1.000000 70.3 rps3_p3 rps3 3 CCATTGCTGGATAGAACGGA ATCGGGACAGACTGAAATGG 20 20 50.0 50.0 57.4 57.3 0.0 10.1 1.319106 85097 85753 734-734 1.000000 69.6 rps3_p4 rps3 4 TCCATTGCTGGATAGAACGG ATCGGGACAGACTGAAATGG 20 20 50.0 50.0 57.4 57.3 0.0 10.1 1.319106 85097 85753 735-735 1.000000 69.6 rps3_p5 rps3 5 CCATTGCTGGATAGAACGGA TGAAATGGGCTACTAGCGAG 20 20 50.0 50.0 57.4 57.1 0.0 1.9 1.511059 85097 85753 722-722 1.000000 68.0 ndhF-rpl32_p1 ndhF-rpl32 1 ATTCTTTGTTGCCGTCGGAA AAAGCTTTTACCGCTGTCCA 20 20 45.0 45.0 58.4 58.0 17.5 5.7 0.424317 115046 116122 1276-1277 1.000000 76.7 ndhF-rpl32_p2 ndhF-rpl32 2 ATTCTTTGTTGCCGTCGGAA AAGCTTTTACCGCTGTCCAA 20 20 45.0 45.0 58.4 58.0 17.5 0.0 0.424317 115046 116122 1275-1276 1.000000 76.7 ndhF-rpl32_p3 ndhF-rpl32 3 AACCGGAAGTGGAACGAAAG AAAGCTTTTACCGCTGTCCA 20 20 50.0 45.0 58.4 58.0 9.5 5.7 0.434538 115046 116122 1225-1226 1.000000 76.7 ndhF-rpl32_p4 ndhF-rpl32 4 AACCGGAAGTGGAACGAAAG AAGCTTTTACCGCTGTCCAA 20 20 50.0 45.0 58.4 58.0 9.5 0.0 0.434538 115046 116122 1224-1225 1.000000 76.7 ndhF-rpl32_p5 ndhF-rpl32 5 GAACCGGAAGTGGAACGAAA AAGCTTTTACCGCTGTCCAA 20 20 50.0 45.0 58.4 58.0 9.5 0.0 0.439043 115046 116122 1225-1226 1.000000 76.6 ccsA_p1 ccsA 1 CCCTCCTCTTTGTGCGTTTA TCTCAAAAACTCACACACGC 20 20 50.0 45.0 57.8 56.9 0.0 0.0 1.284840 117481 118452 1075-1075 1.000000 69.7 ccsA_p2 ccsA 2 CCCTCCTCTTTGTGCGTTTA CTCAAAAACTCACACACGCT 20 20 50.0 45.0 57.8 56.9 0.0 0.0 1.293137 117481 118452 1074-1074 1.000000 69.7 ccsA_p3 ccsA 3 CCCTCCTCTTTGTGCGTTTA TCTCAAAAACTCACACACGCT 20 21 50.0 42.9 57.8 58.4 0.0 0.0 1.550967 117481 118452 1075-1075 1.000000 67.6 ccsA_p4 ccsA 4 CCCTCCTCTTTGTGCGTTTA TTCTCAAAAACTCACACACGC 20 21 50.0 42.9 57.8 57.6 0.0 0.0 1.577866 117481 118452 1076-1076 1.000000 67.4 ccsA_p5 ccsA 5 CCCTCCTCTTTGTGCGTTTA CTCAAAAACTCACACACGCTT 20 21 50.0 42.9 57.8 57.6 0.0 0.0 1.584082 117481 118452 1074-1074 1.000000 67.3 ccsA-ndhD_p1 ccsA-ndhD 1 GCAATTGTGGCTTCTATCGG AGTTGACAAGGTGGAGGCTA 20 20 50.0 50.0 57.2 58.3 7.4 0.0 1.033663 118453 118669 374-374 1.000000 72.8 ccsA-ndhD_p2 ccsA-ndhD 2 GCAATTGTGGCTTCTATCGG GTTGACAAGGTGGAGGCTAT 20 20 50.0 50.0 57.2 57.2 7.4 0.0 1.552658 118453 118669 373-373 1.000000 68.7 ccsA-ndhD_p3 ccsA-ndhD 3 CTGCAATTGTGGCTTCTATCG AGTTGACAAGGTGGAGGCTA 21 20 47.6 50.0 57.7 58.3 7.4 0.0 1.600157 118453 118669 376-376 1.000000 68.3 ccsA-ndhD_p4 ccsA-ndhD 4 GCAATTGTGGCTTCTATCGG ATCAGTTGACAAGGTGGAGG 20 20 50.0 50.0 57.2 57.1 7.4 0.0 1.630358 118453 118669 377-377 1.000000 68.0 ccsA-ndhD_p5 ccsA-ndhD 5 TGCAATTGTGGCTTCTATCG AGTTGACAAGGTGGAGGCTA 20 20 45.0 50.0 56.5 58.3 7.4 0.0 1.765929 118453 118669 375-375 1.000000 66.9 ndhD_p1 ndhD 1 GGTTCTCAAAAACTCCAAACGT TACGTTCCGGAAAACTCCAC 22 20 40.9 50.0 57.6 57.8 0.0 20.8 2.519266 118670 120199 1749-1749 1.000000 59.9 ndhD_p2 ndhD 2 GGTTCTCAAAAACTCCAAACGT TATTTGATTTCGAGCGCGGT 22 20 40.9 45.0 57.6 58.4 0.0 12.2 2.718554 118670 120199 1675-1675 1.000000 58.3 ndhD_p3 ndhD 3 GGTTCTCAAAAACTCCAAACGT CGTTCCGGAAAACTCCACTT 22 20 40.9 50.0 57.6 58.4 0.0 20.8 2.776097 118670 120199 1747-1747 1.000000 57.8 ndhD_p4 ndhD 4 GGTTCTCAAAAACTCCAAACGT TTATTTGATTTCGAGCGCGG 22 20 40.9 45.0 57.6 57.3 0.0 10.7 3.096083 118670 120199 1676-1676 1.000000 55.3 ndhD_p5 ndhD 5 GGTTCTCAAAAACTCCAAACG TACGTTCCGGAAAACTCCAC 21 20 42.9 50.0 55.9 57.8 0.0 20.8 3.229123 118670 120199 1749-1749 1.000000 54.2 ycf1_p1 ycf1 1 AAAATCTCCTTGGCCTGCTT AAGATTCAACCGTGGCTCAT 20 20 45.0 45.0 57.7 57.5 3.3 0.0 0.812619 127995 128114 198-198 1.000000 73.9 ycf1_p2 ycf1 2 AAATCTCCTTGGCCTGCTTG AAGATTCAACCGTGGCTCAT 20 20 50.0 45.0 58.4 57.5 3.3 0.0 0.943192 127995 128114 197-197 1.000000 72.9 ycf1_p3 ycf1 3 CAAAATCTCCTTGGCCTGCT AAGATTCAACCGTGGCTCAT 20 20 50.0 45.0 58.4 57.5 3.3 0.0 0.943192 127995 128114 199-199 1.000000 72.9 ycf1_p4 ycf1 4 AAAATCTCCTTGGCCTGCTT TCCCATGTCGAATCTGGAAC 20 20 45.0 50.0 57.7 57.3 3.3 10.0 1.007129 127995 128114 259-259 1.000000 72.3 ycf1_p5 ycf1 5 AAAATCTCCTTGGCCTGCTT CCCATGTCGAATCTGGAACT 20 20 45.0 50.0 57.7 57.3 3.3 10.0 1.014575 127995 128114 258-258 1.000000 72.2 trnV-GAC-rps12_p1 trnV-GAC-rps12 1 CGGGGGAGCAAGTCAAAATA TGGCAACTTTACGTAAGGCA 20 20 50.0 45.0 57.9 57.7 0.0 16.5 0.380474 141590 143494 2062-2062 1.000000 77.0 trnV-GAC-rps12_p2 trnV-GAC-rps12 2 GATGACTTCCACCACGTCAA TGGCAACTTTACGTAAGGCA 20 20 50.0 45.0 57.8 57.7 0.0 16.5 0.421509 141590 143494 2001-2001 1.000000 76.7 trnV-GAC-rps12_p3 trnV-GAC-rps12 3 AACTGATGACTTCCACCACG TGGCAACTTTACGTAAGGCA 20 20 50.0 45.0 57.8 57.7 0.0 16.5 0.427523 141590 143494 2005-2005 1.000000 76.6 trnV-GAC-rps12_p4 trnV-GAC-rps12 4 ATGACTTCCACCACGTCAAG TGGCAACTTTACGTAAGGCA 20 20 50.0 45.0 57.8 57.7 0.0 16.5 0.427523 141590 143494 2000-2000 1.000000 76.6 trnV-GAC-rps12_p5 trnV-GAC-rps12 5 CTGATGACTTCCACCACGTC TGGCAACTTTACGTAAGGCA 20 20 55.0 45.0 58.3 57.7 0.0 16.5 0.542896 141590 143494 2003-2003 1.000000 75.7 ycf2_p1 ycf2 1 CTACCACCCGGTCAATTCTG GTACTTCGAGCTTGGAACGA 20 20 55.0 50.0 58.0 57.7 0.0 0.0 0.367085 148687 149686 1129-1129 1.000000 77.1 ycf2_p2 ycf2 2 TCTACCACCCGGTCAATTCT GTACTTCGAGCTTGGAACGA 20 20 50.0 50.0 58.1 57.7 0.0 0.0 0.395925 148687 149686 1130-1130 1.000000 76.8 ycf2_p3 ycf2 3 GTTTCCACGACTCTACCACC GTACTTCGAGCTTGGAACGA 20 20 55.0 50.0 57.9 57.7 0.0 0.0 0.418889 148687 149686 1141-1141 1.000000 76.6 ycf2_p4 ycf2 4 CTACCACCCGGTCAATTCTG TGGTACTTCGAGCTTGGAAC 20 20 55.0 50.0 58.0 57.5 0.0 0.0 0.474785 148687 149686 1131-1131 1.000000 76.2 ycf2_p5 ycf2 5 AATCCCTCTTTCATGGCCAC GTACTTCGAGCTTGGAACGA 20 20 50.0 50.0 57.9 57.7 8.2 0.0 0.492883 148687 149686 1101-1101 1.000000 76.1