primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score matK-trnK-UUU_p1 matK-trnK-UUU 1 TCTTTGTAATTCTGTCATTTATAGACA AACGGTAGAGTACTCGGCTT 27 20 25.9 50.0 55.2 58.2 0.0 17.1 9.966134 3220 4185 1018-1043 1.000000 44.1 matK-trnK-UUU_p2 matK-trnK-UUU 2 TCTTTGTAATTCTGTCATTTATAGACA ACGGTAGAGTACTCGGCTTT 27 20 25.9 50.0 55.2 58.2 0.0 17.1 9.966134 3220 4185 1017-1042 1.000000 44.1 matK-trnK-UUU_p3 matK-trnK-UUU 3 CTTTGTAATTCTGTCATTTATAGACA ACGGTAGAGTACTCGGCTTT 26 20 26.9 50.0 53.9 58.2 0.0 17.1 10.234363 3220 4185 1016-1041 1.000000 44.1 matK-trnK-UUU_p4 matK-trnK-UUU 4 TCTTTGTAATTCTGTCATTTATAGACA ATCCGGGTTGCTAACTCAAC 27 20 25.9 50.0 55.2 57.9 0.0 0.0 9.907139 3220 4185 1035-1060 1.000000 44.0 matK-trnK-UUU_p5 matK-trnK-UUU 5 CTTTGTAATTCTGTCATTTATAGACA ATCCGGGTTGCTAACTCAAC 26 20 26.9 50.0 53.9 57.9 0.0 0.0 10.175367 3220 4185 1034-1059 1.000000 44.0 trnK-UUU-rps16_p1 trnK-UUU-rps16 1 AAAGCCGAGTACTCTACCGT TCGATCCCGAAGAGAAGGAA 20 20 50.0 50.0 58.2 57.9 20.3 0.0 0.307743 4223 4858 836-844 1.000000 83.8 trnK-UUU-rps16_p2 trnK-UUU-rps16 2 AAGCCGAGTACTCTACCGTT TCGATCCCGAAGAGAAGGAA 20 20 50.0 50.0 58.2 57.9 20.3 0.0 0.307743 4223 4858 835-843 1.000000 83.8 trnK-UUU-rps16_p3 trnK-UUU-rps16 3 AAAGCCGAGTACTCTACCGT GCAAAGACAACGAATTCCGG 20 20 50.0 50.0 58.2 58.0 20.3 0.0 0.204673 4223 4858 1249-1260 1.000000 83.7 trnK-UUU-rps16_p4 trnK-UUU-rps16 4 AAGCCGAGTACTCTACCGTT GCAAAGACAACGAATTCCGG 20 20 50.0 50.0 58.2 58.0 20.3 0.0 0.204673 4223 4858 1248-1259 1.000000 83.7 trnK-UUU-rps16_p5 trnK-UUU-rps16 5 AGGATCAGTCGCGGTCTTAT GCAAAGACAACGAATTCCGG 20 20 50.0 50.0 58.3 58.0 6.1 0.0 0.342627 4223 4858 1334-1345 1.000000 82.4 psbK-psbI_p1 psbK-psbI 1 GTTTGGCAAGCTGCTGTAAG TGGACTAAAGCGTCGGATTG 20 20 50.0 50.0 57.9 58.0 1.4 0.0 0.060677 7011 7452 799-820 1.000000 86.2 psbK-psbI_p2 psbK-psbI 2 GTTTGGCAAGCTGCTGTAAG GTGGACTAAAGCGTCGGATT 20 20 50.0 50.0 57.9 58.0 1.4 0.0 0.062065 7011 7452 800-821 1.000000 86.2 psbK-psbI_p3 psbK-psbI 3 GTTTGGCAAGCTGCTGTAAG TCTCCGACTCCCCTGATAAC 20 20 50.0 55.0 57.9 57.9 1.4 0.0 0.124928 7011 7452 732-753 1.000000 85.9 psbK-psbI_p4 psbK-psbI 4 GTTTGGCAAGCTGCTGTAAG CTCCGACTCCCCTGATAACT 20 20 50.0 55.0 57.9 57.9 1.4 0.0 0.130823 7011 7452 731-752 1.000000 85.9 psbK-psbI_p5 psbK-psbI 5 GTTTGGCAAGCTGCTGTAAG ACAAAAGAAGTACTGGCCCG 20 20 50.0 50.0 57.9 58.1 1.4 0.0 0.163885 7011 7452 1023-1044 1.000000 84.7 petN-psbM_p1 petN-psbM 1 TAGTATGGGGAAGGAGTGGG AAAACAGTCAGCCAAAATAAT 20 21 55.0 28.6 57.5 52.2 0.0 0.0 7.339198 27850 28402 603-630 1.000000 44.8 petN-psbM_p2 petN-psbM 2 TAGTATGGGGAAGGAGTGGG AAACAGTCAGCCAAAATAATT 20 21 55.0 28.6 57.5 52.2 0.0 0.0 7.339198 27850 28402 602-629 1.000000 44.8 petN-psbM_p3 petN-psbM 3 TAGTAAGTCTCGCTTGGGCT AAAACAGTCAGCCAAAATAAT 20 21 50.0 28.6 58.2 52.2 0.0 0.0 7.001019 27850 28402 660-687 1.000000 44.4 petN-psbM_p4 petN-psbM 4 TAGTAAGTCTCGCTTGGGCT AAACAGTCAGCCAAAATAATT 20 21 50.0 28.6 58.2 52.2 0.0 0.0 7.001019 27850 28402 659-686 1.000000 44.4 petN-psbM_p5 petN-psbM 5 TAGTAAGTCTCGCTTGGGCT AAAACAGTCAGCCAAAATAATT 20 22 50.0 27.3 58.2 53.1 0.0 0.0 7.083008 27850 28402 660-687 1.000000 44.4 trnT-UGU-trnL-UAA_p1 trnT-UGU-trnL-UAA 1 GCGATGCTCTAACCTCTGAG ACCAATTTCGCCATATCCCC 20 20 55.0 50.0 57.9 58.0 0.0 0.0 0.137364 44841 45842 1007-1052 1.000000 86.3 trnT-UGU-trnL-UAA_p2 trnT-UGU-trnL-UAA 2 GCGATGCTCTAACCTCTGAG TAGCGTCTACCAATTTCGCC 20 20 55.0 50.0 57.9 58.1 0.0 0.0 0.202173 44841 45842 1015-1060 1.000000 85.8 trnT-UGU-trnL-UAA_p3 trnT-UGU-trnL-UAA 3 GGAATCGAACCGATGACCAT ACCAATTTCGCCATATCCCC 20 20 50.0 50.0 57.8 58.0 15.5 0.0 0.245117 44841 45842 1039-1084 1.000000 85.4 trnT-UGU-trnL-UAA_p4 trnT-UGU-trnL-UAA 4 GGAATCGAACCGATGACCAT TAGCGTCTACCAATTTCGCC 20 20 50.0 50.0 57.8 58.1 15.5 0.0 0.309926 44841 45842 1047-1092 1.000000 84.8 trnT-UGU-trnL-UAA_p5 trnT-UGU-trnL-UAA 5 GCGATGCTCTAACCTCTGAG AGTCCGTAGCGTCTACCAAT 20 20 55.0 50.0 57.9 58.2 0.0 10.2 0.372548 44841 45842 1021-1066 1.000000 84.4 psaI-ycf4_p1 psaI-ycf4 1 GGCAATTGCAATGGCTTCTT AAAGGATAAAGGCCCAGCAA 20 20 45.0 45.0 57.9 57.4 32.4 0.0 0.725093 58308 58690 518-523 1.000000 78.4 psaI-ycf4_p2 psaI-ycf4 2 GGCAATTGCAATGGCTTCTT AAGGATAAAGGCCCAGCAAA 20 20 45.0 45.0 57.9 57.4 32.4 0.0 0.725093 58308 58690 517-522 1.000000 78.4 psaI-ycf4_p3 psaI-ycf4 3 GGCAATTGCAATGGCTTCTT AGGATAAAGGCCCAGCAAAA 20 20 45.0 45.0 57.9 57.4 32.4 0.0 0.725093 58308 58690 516-521 1.000000 78.4 psaI-ycf4_p4 psaI-ycf4 4 GGCAATTGCAATGGCTTCTT AAAAGGATAAAGGCCCAGCA 20 20 45.0 45.0 57.9 57.4 32.4 0.0 0.725093 58308 58690 519-524 1.000000 78.3 psaI-ycf4_p5 psaI-ycf4 5 TAGTCTTTCCGGCAATTGCA AGGATAAAGGCCCAGCAAAA 20 20 45.0 45.0 57.8 57.4 30.3 0.0 0.814220 58308 58690 526-531 1.000000 77.6 clpP-psbB_p1 clpP-psbB 1 CGCACTATACGTCAACCCAA CAGATAGCTGCCAAGAAGCA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.035056 70429 71025 968-1014 1.000000 86.7 clpP-psbB_p2 clpP-psbB 2 CGCACTATACGTCAACCCAA AGATAGCTGCCAAGAAGCAC 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.036482 70429 71025 967-1013 1.000000 86.7 clpP-psbB_p3 clpP-psbB 3 CGCACTATACGTCAACCCAA ACACCCATATTCCAGGACCA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.021142 70429 71025 1135-1181 1.000000 86.4 clpP-psbB_p4 clpP-psbB 4 TCCTGAATGGGCCCTCTAAA ACACCCATATTCCAGGACCA 20 20 50.0 50.0 58.0 58.0 25.7 0.0 0.040381 70429 71025 1844-1844 0.333333 53.0 clpP-psbB_p5 clpP-psbB 5 TTCCTGAATGGGCCCTCTAA ACACCCATATTCCAGGACCA 20 20 50.0 50.0 58.0 58.0 25.7 0.0 0.040381 70429 71025 1845-1845 0.333333 53.0 rpl16-rps3_p1 rpl16-rps3 1 CAAGTGCCTGAAGAGCGTAT GCAGGGTTCCCTTACAAACA 20 20 50.0 50.0 58.0 58.0 0.0 7.8 0.026030 80382 81822 1614-1625 1.000000 85.5 rpl16-rps3_p2 rpl16-rps3 2 TCGCCCTGCTTCTATTTGTC GCAGGGTTCCCTTACAAACA 20 20 50.0 50.0 58.0 58.0 0.0 7.8 0.034469 80382 81822 1655-1666 1.000000 85.3 rpl16-rps3_p3 rpl16-rps3 3 CGCCCTGCTTCTATTTGTCT GCAGGGTTCCCTTACAAACA 20 20 50.0 50.0 58.0 58.0 0.0 7.8 0.040132 80382 81822 1654-1665 1.000000 85.2 rpl16-rps3_p4 rpl16-rps3 4 CTAGCTGTGATCCAAGCAGG GCAGGGTTCCCTTACAAACA 20 20 55.0 50.0 58.0 58.0 16.5 7.8 0.059466 80382 81822 1636-1647 1.000000 85.1 rpl16-rps3_p5 rpl16-rps3 5 CTGTGATCCAAGCAGGTTCA GCAGGGTTCCCTTACAAACA 20 20 50.0 50.0 57.8 58.0 5.2 7.8 0.199888 80382 81822 1632-1643 1.000000 84.0 trnI-CAU-ycf2_p1 trnI-CAU-ycf2 1 GTTGGGCGCTTTAACCATTC TTGTTGCACCCTGTGAATCA 20 20 50.0 45.0 58.0 57.9 7.6 0.0 0.073634 85660 85727 311-483 1.000000 80.8 trnI-CAU-ycf2_p2 trnI-CAU-ycf2 2 GTTGGGCGCTTTAACCATTC AATCATGGTCCTTGCGGATC 20 20 50.0 50.0 58.0 58.0 7.6 0.0 0.036329 85660 85727 797-969 1.000000 80.5 trnI-CAU-ycf2_p3 trnI-CAU-ycf2 3 CACTTGACTGTCTACGGCTC AATCATGGTCCTTGCGGATC 20 20 55.0 50.0 58.0 58.0 9.5 0.0 0.043155 85660 85727 1370-1542 1.000000 80.4 trnI-CAU-ycf2_p4 trnI-CAU-ycf2 4 GTTGGGCGCTTTAACCATTC CGAACCCCGGTTAGATTCAG 20 20 50.0 55.0 58.0 58.1 7.6 0.0 0.073268 85660 85727 634-806 1.000000 80.4 trnI-CAU-ycf2_p5 trnI-CAU-ycf2 5 CCACAACGATGCTGTCCATA AATCATGGTCCTTGCGGATC 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.049892 85660 85727 1417-1589 1.000000 80.3 ndhF-rpl32_p1 ndhF-rpl32 1 ACACATTCCCACAAGTTCCC TCCACCGGACAGTCAAAAAG 20 20 50.0 50.0 58.0 58.0 0.0 9.5 0.042830 111377 111509 664-1342 1.000000 81.6 ndhF-rpl32_p2 ndhF-rpl32 2 CACATTCCCACAAGTTCCCA TCCACCGGACAGTCAAAAAG 20 20 50.0 50.0 58.0 58.0 0.0 9.5 0.044251 111377 111509 663-1341 1.000000 81.6 ndhF-rpl32_p3 ndhF-rpl32 3 AAGGGGAAATTGTGCGGATT TCCACCGGACAGTCAAAAAG 20 20 45.0 50.0 58.1 58.0 0.0 9.5 0.101015 111377 111509 931-1609 1.000000 81.0 ndhF-rpl32_p4 ndhF-rpl32 4 AGGGGAAATTGTGCGGATTT TCCACCGGACAGTCAAAAAG 20 20 45.0 50.0 58.1 58.0 0.0 9.5 0.101015 111377 111509 930-1608 1.000000 81.0 ndhF-rpl32_p5 ndhF-rpl32 5 GGCCGAAAACCACATAGCTA TCCACCGGACAGTCAAAAAG 20 20 50.0 50.0 58.0 58.0 0.0 9.5 0.070887 111377 111509 361-1035 0.666667 68.4 rpl32-trnL-UAG_p1 rpl32-trnL-UAG 1 CTTTTTGACTGTCCGGTGGA GTCCCGAAGAAATCCAACGA 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.127156 111684 112429 896-1401 1.000000 87.7 rpl32-trnL-UAG_p2 rpl32-trnL-UAG 2 CTTTTTGACTGTCCGGTGGA TGGCGAAACCTTGGGTAAAA 20 20 50.0 45.0 58.0 57.9 0.0 0.0 0.107041 111684 112429 1043-1548 1.000000 87.4 rpl32-trnL-UAG_p3 rpl32-trnL-UAG 3 GGCCGAAAACCACATAGCTA GTCCCGAAGAAATCCAACGA 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.121630 111684 112429 1580-2416 0.666667 69.3 rpl32-trnL-UAG_p4 rpl32-trnL-UAG 4 GGCCGAAAACCACATAGCTA TGGCGAAACCTTGGGTAAAA 20 20 50.0 45.0 58.0 57.9 0.0 0.0 0.101515 111684 112429 1727-2563 0.666667 69.2 rpl32-trnL-UAG_p5 rpl32-trnL-UAG 5 AGATTGGCCGAAAACCACAT TGGCGAAACCTTGGGTAAAA 20 20 45.0 45.0 58.1 57.9 0.0 0.0 0.145478 111684 112429 1732-1732 0.333333 52.2 ccsA-ndhD_p1 ccsA-ndhD 1 TTTTACCCAAGGTTTCGCCA TTTTTGATTCTGGGCCACGA 20 20 45.0 45.0 57.9 58.0 0.0 0.0 0.080541 113583 113856 1059-1087 1.000000 84.4 ccsA-ndhD_p2 ccsA-ndhD 2 TTTTACCCAAGGTTTCGCCA TTCTCGATGGCTTCTCTTGC 20 20 45.0 50.0 57.9 58.0 0.0 0.0 0.084570 113583 113856 1279-1307 1.000000 83.9 ccsA-ndhD_p3 ccsA-ndhD 3 TTTTACCCAAGGTTTCGCCA CTCGATGGCTTCTCTTGCAT 20 20 45.0 50.0 57.9 58.0 0.0 0.0 0.118006 113583 113856 1277-1305 1.000000 83.7 ccsA-ndhD_p4 ccsA-ndhD 4 GCATGGGGCTCTTATTGGAA TTTTTGATTCTGGGCCACGA 20 20 50.0 45.0 57.9 58.0 0.0 0.0 0.083484 113583 113856 647-654 1.000000 83.3 ccsA-ndhD_p5 ccsA-ndhD 5 GCATGGGGCTCTTATTGGAA TTCTCGATGGCTTCTCTTGC 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.087513 113583 113856 867-874 1.000000 82.9 ndhG-ndhI_p1 ndhG-ndhI 1 TGTATTGGTCCAGGTAAATCCA TCAACAACGATTACCAATTCCT 22 22 40.9 36.4 56.8 56.0 0.0 0.0 7.209467 117063 117232 216-217 1.000000 47.0 ndhG-ndhI_p2 ndhG-ndhI 2 TGTATTGGTCCAGGTAAATCCA TCAACATCAACAACGATTACCA 22 22 40.9 36.4 56.8 56.3 0.0 0.0 6.909261 117063 117232 223-223 0.333333 13.3 ndhG-ndhI_p3 ndhG-ndhI 3 TGTATTGGTCCAGGTAAATCCA TCAACATCAACAACGATTACCAA 22 23 40.9 34.8 56.8 57.0 0.0 0.0 7.220233 117063 117232 223-223 0.333333 13.3 ndhG-ndhI_p4 ndhG-ndhI 4 TGTATTGGTCCAGGTAAATCCA TTCAACATCAACAACGATTACCA 22 23 40.9 34.8 56.8 57.0 0.0 0.0 7.220233 117063 117232 224-224 0.333333 13.3 ndhG-ndhI_p5 ndhG-ndhI 5 TGTATTGGTCCAGGTAAATCCA ACATCAACAACGATTACCAATTCC 22 24 40.9 37.5 56.8 58.1 0.0 0.0 7.259496 117063 117232 220-220 0.333333 13.3 ndhI-ndhA_p1 ndhI-ndhA 1 TCCAATGTACCTTGCAGCTC ACCAGAAGCAGAGGAGGAAT 20 20 50.0 50.0 57.9 58.0 5.4 0.0 0.149875 117743 117855 576-590 1.000000 81.8 ndhI-ndhA_p2 ndhI-ndhA 2 ACGAAAACGCTCTGATGTGA ACCAGAAGCAGAGGAGGAAT 20 20 45.0 50.0 57.9 58.0 0.0 0.0 0.184930 117743 117855 669-683 1.000000 81.3 ndhI-ndhA_p3 ndhI-ndhA 3 ACGCGAACACATACTTCACA ACCAGAAGCAGAGGAGGAAT 20 20 45.0 50.0 57.9 58.0 15.9 0.0 0.179022 117743 117855 725-739 1.000000 81.1 ndhI-ndhA_p4 ndhI-ndhA 4 TCCAATGTACCTTGCAGCTC GCCCATAGAGAAGCCGTATG 20 20 50.0 55.0 57.9 57.9 5.4 0.0 0.199915 117743 117855 807-821 1.000000 80.9 ndhI-ndhA_p5 ndhI-ndhA 5 TCCAATGTACCTTGCAGCTC TAGGCTTCATGTGCGGTTTT 20 20 50.0 45.0 57.9 58.1 5.4 0.0 0.209574 117743 117855 782-796 1.000000 80.8 ycf1_p1 ycf1 1 TCCATTTGTCTTTTTGACTCA AGGTCTCGATTAATACCTAAAGA 21 23 33.3 34.8 53.6 54.1 0.0 5.9 12.347564 123583 123702 169-175 1.000000 50.8 ycf1_p2 ycf1 2 TTCCATTTGTCTTTTTGACTCA AGGTCTCGATTAATACCTAAAGA 22 23 31.8 34.8 54.4 54.1 0.0 5.9 12.494985 123583 123702 170-176 1.000000 50.8 ycf1_p3 ycf1 3 TCCATTTGTCTTTTTGACTCA AAGGTCTCGATTAATACCTAAAGA 21 24 33.3 33.3 53.6 54.9 0.0 7.9 12.580015 123583 123702 170-176 1.000000 50.8 ycf1_p4 ycf1 4 TCCATTTGTCTTTTTGACTCA AGGTCTCGATTAATACCTAAAGAA 21 24 33.3 33.3 53.6 54.9 0.0 5.9 12.580015 123583 123702 169-175 1.000000 50.8 ycf1_p5 ycf1 5 TTTCCATTTGTCTTTTTGACTCA AGGTCTCGATTAATACCTAAAGA 23 23 30.4 34.8 55.2 54.1 0.0 5.9 12.716404 123583 123702 171-177 1.000000 50.8 ycf1-trnN-GUU_p1 ycf1-trnN-GUU 1 CCTTCTTCCATAACCCGAGC ATATGTTTGCTCGCGGGAAT 20 20 55.0 45.0 58.0 58.0 0.0 12.0 0.077754 127505 127837 836-1295 1.000000 82.5 ycf1-trnN-GUU_p2 ycf1-trnN-GUU 2 TCCTCGGTTCCTTCTTCCAT ATATGTTTGCTCGCGGGAAT 20 20 50.0 45.0 58.0 58.0 0.0 12.0 0.080060 127505 127837 845-1304 1.000000 82.4 ycf1-trnN-GUU_p3 ycf1-trnN-GUU 3 CCTTCTTCCATAACCCGAGC GGCAGAATAGCAGAGCAAGT 20 20 55.0 50.0 58.0 58.0 0.0 0.0 0.080603 127505 127837 898-1357 1.000000 82.3 ycf1-trnN-GUU_p4 ycf1-trnN-GUU 4 TCCTCGGTTCCTTCTTCCAT GGCAGAATAGCAGAGCAAGT 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.082909 127505 127837 907-1366 1.000000 82.3 ycf1-trnN-GUU_p5 ycf1-trnN-GUU 5 TGATACCTCCTCCTCGGTTC ATATGTTTGCTCGCGGGAAT 20 20 55.0 45.0 57.9 58.0 0.0 12.0 0.101516 127505 127837 855-1314 1.000000 82.2 ycf2-trnI-CAU_p1 ycf2-trnI-CAU 1 TTGTTGCACCCTGTGAATCA GTTGGGCGCTTTAACCATTC 20 20 45.0 50.0 57.9 58.0 0.0 7.6 0.073634 149903 149970 311-483 1.000000 80.8 ycf2-trnI-CAU_p2 ycf2-trnI-CAU 2 AATCATGGTCCTTGCGGATC GTTGGGCGCTTTAACCATTC 20 20 50.0 50.0 58.0 58.0 0.0 7.6 0.036329 149903 149970 797-969 1.000000 80.5 ycf2-trnI-CAU_p3 ycf2-trnI-CAU 3 AATCATGGTCCTTGCGGATC CACTTGACTGTCTACGGCTC 20 20 50.0 55.0 58.0 58.0 0.0 9.5 0.043155 149903 149970 1370-1542 1.000000 80.4 ycf2-trnI-CAU_p4 ycf2-trnI-CAU 4 CGAACCCCGGTTAGATTCAG GTTGGGCGCTTTAACCATTC 20 20 55.0 50.0 58.1 58.0 0.0 7.6 0.073268 149903 149970 634-806 1.000000 80.4 ycf2-trnI-CAU_p5 ycf2-trnI-CAU 5 AATCATGGTCCTTGCGGATC CCACAACGATGCTGTCCATA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.049892 149903 149970 1417-1589 1.000000 80.3