feature_id feature_type parent_gene label_name start end strand length_bp region pi variable_sites indel_sites conserved_left_bp conserved_right_bp primer_available species_resolution unique_haplotype_count species_specific_haplotype_ratio interspecific_divergence alignment_reliability markerseek_score trnH-GUG tRNA trnH-GUG trnH-GUG 14 88 -1 75 Genome 0.008889 1 75 25 2 no 0.111111 3 0.333333 0.008889 0.000000 14.100000 IGS_001 igs trnH-GUG|psbA trnH-GUG-psbA 89 267 0 179 Genome 0.036517 11 179 19 18 no 0.444444 5 0.800000 0.033922 0.000000 40.000000 psbA gene psbA psbA 268 1329 -1 1062 Genome 0.005993 14 961 1 2 no 0.555556 7 0.714286 0.006833 0.712806 36.200000 IGS_002 igs psbA|trnK-UUU psbA-trnK-UUU 1330 1530 0 201 Genome 0.037401 15 11 92 51 yes 0.444444 6 0.666667 0.031832 0.985075 62.400000 trnK-UUU_part2 tRNA trnK-UUU trnK-UUU 1531 1565 -1 35 Genome 0.000000 0 0 12 16 no 0.000000 1 0.000000 0.000000 1.000000 19.700000 matK gene matK matK 1826 3343 -1 1518 Genome 0.009332 33 14 13 67 no 0.777778 8 0.875000 0.009406 1.000000 48.500000 IGS_005 igs matK|trnK-UUU matK-trnK-UUU 3344 4079 0 736 Genome 0.005057 10 9 16 78 no 0.555556 6 0.833333 0.005080 1.000000 42.000000 trnK-UUU_part1 tRNA trnK-UUU trnK-UUU 4080 4116 -1 37 Genome 0.000000 0 0 39 41 no 0.000000 1 0.000000 0.000000 1.000000 21.700000 IGS_006 igs trnK-UUU|rps16 trnK-UUU-rps16 4117 4652 0 536 Genome 0.018307 23 17 76 35 no 0.555556 6 0.833333 0.018456 0.979478 53.300000 rps16 gene rps16 rps16 4653 5741 -1 1089 Genome 0.008068 21 8 23 33 no 0.666667 7 0.857143 0.008110 0.998163 46.000000 IGS_007 igs rps16|trnQ-UUG rps16-trnQ-UUG 5742 6996 0 1255 Genome 0.018118 57 55 98 86 yes 0.777778 8 0.875000 0.018367 0.989641 64.700000 trnQ-UUG tRNA trnQ-UUG trnQ-UUG 6997 7068 -1 72 Genome 0.000000 0 0 50 14 no 0.000000 1 0.000000 0.000000 1.000000 19.800000 IGS_008 igs trnQ-UUG|psbK trnQ-UUG-psbK 7069 7418 0 350 Genome 0.012063 10 0 122 55 no 0.333333 5 0.600000 0.012063 1.000000 39.200000 psbK gene psbK psbK 7419 7604 1 186 Genome 0.007168 3 0 22 96 no 0.111111 3 0.333333 0.007168 1.000000 27.700000 IGS_009 igs psbK|psbI psbK-psbI 7605 7890 0 286 Genome 0.014624 10 20 48 11 no 0.444444 6 0.666667 0.014062 0.996503 44.700000 psbI gene psbI psbI 7891 8001 1 111 Genome 0.005506 2 0 25 67 no 0.111111 3 0.333333 0.005506 1.000000 27.400000 IGS_010 igs psbI|trnS-GCU psbI-trnS-GCU 8002 8150 0 149 Genome 0.021253 9 0 24 90 no 0.555556 6 0.833333 0.021253 1.000000 48.100000 trnS-GCU tRNA trnS-GCU trnS-GCU 8151 8229 -1 79 Genome 0.000000 0 0 32 11 no 0.000000 1 0.000000 0.000000 1.000000 19.600000 IGS_011 igs trnS-GCU|trnG-UCC trnS-GCU-trnG-UCC 8230 8770 0 541 Genome 0.011227 13 29 111 69 no 0.777778 8 0.875000 0.010805 0.992606 57.300000 trnG-UCC_part1 tRNA trnG-UCC trnG-UCC 8771 8793 1 23 Genome 0.000000 0 0 77 46 no 0.000000 1 0.000000 0.000000 1.000000 22.200000 trnG-UCC_part2 tRNA trnG-UCC trnG-UCC 9496 9543 1 48 Genome 0.000000 0 0 83 11 no 0.000000 1 0.000000 0.000000 1.000000 19.600000 IGS_014 igs trnG-UCC|trnR-UCU trnG-UCC-trnR-UCU 9544 9674 0 131 Genome 0.025021 7 12 131 104 yes 0.555556 7 0.714286 0.026855 1.000000 60.100000 trnR-UCU tRNA trnR-UCU trnR-UCU 9675 9746 1 72 Genome 0.000000 0 0 8 32 no 0.000000 1 0.000000 0.000000 1.000000 19.400000 IGS_015 igs trnR-UCU|atpA trnR-UCU-atpA 9747 9858 0 112 Genome 0.013889 4 16 80 6 no 0.444444 6 0.666667 0.015552 1.000000 42.800000 atpA gene atpA atpA 9859 11382 -1 1524 Genome 0.002989 10 0 8 18 no 0.222222 4 0.500000 0.002989 1.000000 31.900000 IGS_016 igs atpA|atpF atpA-atpF 11383 11430 0 48 Genome 0.020833 3 0 300 13 no 0.111111 3 0.333333 0.020833 1.000000 39.000000 atpF gene atpF atpF 11431 12711 -1 1281 Genome 0.004314 15 27 0 104 no 0.666667 7 0.857143 0.004328 0.985168 42.900000 IGS_017 igs atpF|atpH atpF-atpH 12712 13031 0 320 Genome 0.013651 9 40 36 90 no 0.333333 5 0.600000 0.013167 0.937500 40.800000 atpH gene atpH atpH 13032 13277 -1 246 Genome 0.000903 1 0 54 69 no 0.111111 2 0.500000 0.000903 1.000000 25.800000 IGS_018 igs atpH|atpI atpH-atpI 13278 14420 0 1143 Genome 0.009356 25 13 155 50 no 0.666667 7 0.857143 0.009394 1.000000 49.500000 atpI gene atpI atpI 14421 15164 -1 744 Genome 0.001269 2 0 26 17 no 0.000000 3 0.000000 0.001269 1.000000 27.200000 IGS_019 igs atpI|rps2 atpI-rps2 15165 15441 0 277 Genome 0.010028 8 7 300 59 no 0.555556 7 0.714286 0.010232 1.000000 44.600000 rps2 gene rps2 rps2 15442 16152 -1 711 Genome 0.005860 10 0 68 17 no 0.555556 6 0.833333 0.005860 1.000000 41.100000 IGS_020 igs rps2|rpoC2 rps2-rpoC2 16153 16364 0 212 Genome 0.011006 7 8 24 42 no 0.555556 6 0.833333 0.009280 0.990566 44.100000 rpoC2 gene rpoC2 rpoC2 16365 20525 -1 4161 Genome 0.005614 56 0 12 18 no 1.000000 9 1.000000 0.005614 1.000000 43.900000 IGS_021 igs rpoC2|rpoC1 rpoC2-rpoC1 20526 20748 0 223 Genome 0.004235 2 0 255 73 no 0.000000 3 0.000000 0.004235 1.000000 27.300000 rpoC1 gene rpoC1 rpoC1 20749 23545 -1 2797 Genome 0.005435 41 13 197 6 no 1.000000 9 1.000000 0.005403 0.999642 46.300000 IGS_022 igs rpoC1|rpoB rpoC1-rpoB 23546 23571 0 26 Genome 0.008547 1 0 72 87 no 0.111111 2 0.500000 0.008547 1.000000 34.900000 rpoB gene rpoB rpoB 23572 26784 -1 3213 Genome 0.003579 29 0 19 55 no 0.666667 7 0.857143 0.003579 1.000000 38.200000 IGS_023 igs rpoB|trnC-GCA rpoB-trnC-GCA 26785 28000 0 1216 Genome 0.011187 32 235 3 92 no 1.000000 9 1.000000 0.011395 1.000000 57.800000 trnC-GCA tRNA trnC-GCA trnC-GCA 28001 28071 1 71 Genome 0.000000 0 0 9 21 no 0.000000 1 0.000000 0.000000 1.000000 19.400000 IGS_024 igs trnC-GCA|petN trnC-GCA-petN 28072 28759 0 688 Genome 0.007267 14 23 80 50 no 0.444444 6 0.666667 0.007398 1.000000 46.800000 petN gene petN petN 28760 28849 1 90 Genome 0.002469 1 0 2 25 no 0.111111 2 0.500000 0.002469 1.000000 23.500000 IGS_025 igs petN|psbM petN-psbM 28850 30006 0 1157 Genome 0.013402 38 123 39 51 yes 1.000000 9 1.000000 0.012428 0.985307 62.100000 psbM gene psbM psbM 30007 30123 -1 117 Genome 0.006648 2 0 4 62 no 0.000000 3 0.000000 0.006648 1.000000 24.200000 IGS_026 igs psbM|trnD-GUC psbM-trnD-GUC 30124 30815 0 692 Genome 0.008870 15 34 59 104 no 0.777778 8 0.875000 0.009197 0.995665 56.100000 trnD-GUC tRNA trnD-GUC trnD-GUC 30816 30889 -1 74 Genome 0.000000 0 0 20 30 no 0.000000 1 0.000000 0.000000 1.000000 20.200000 IGS_027 igs trnD-GUC|trnY-GUA trnD-GUC-trnY-GUA 30890 31009 0 120 Genome 0.011111 3 0 94 300 no 0.111111 3 0.333333 0.011111 1.000000 36.000000 trnY-GUA tRNA trnY-GUA trnY-GUA 31010 31093 -1 84 Genome 0.000000 0 0 53 236 no 0.000000 1 0.000000 0.000000 1.000000 22.700000 IGS_028 igs trnY-GUA|trnE-UUC trnY-GUA-trnE-UUC 31094 31168 0 75 Genome 0.000000 0 0 137 161 no 0.000000 1 0.000000 0.000000 1.000000 29.000000 trnE-UUC tRNA trnE-UUC trnE-UUC 31169 31241 -1 73 Genome 0.000000 0 0 212 88 no 0.000000 1 0.000000 0.000000 1.000000 25.400000 IGS_029 igs trnE-UUC|trnT-GGU trnE-UUC-trnT-GGU 31242 32043 0 802 Genome 0.028046 47 52 285 14 yes 1.000000 9 1.000000 0.026818 0.958853 69.200000 trnT-GGU tRNA trnT-GGU trnT-GGU 32044 32115 1 72 Genome 0.007716 1 0 18 104 no 0.000000 2 0.000000 0.007716 1.000000 25.300000 IGS_030 igs trnT-GGU|psbD trnT-GGU-psbD 32116 33545 0 1430 Genome 0.012021 43 221 57 11 no 0.666667 7 0.857143 0.012349 0.973427 51.100000 psbD gene psbD psbD 33546 34607 1 1062 Genome 0.001412 3 0 65 126 no 0.000000 3 0.000000 0.001412 1.000000 30.900000 psbC gene psbC psbC 34555 35976 1 1422 Genome 0.002500 7 0 259 8 no 0.000000 3 0.000000 0.002500 1.000000 27.300000 IGS_032 igs psbC|trnS-UGA psbC-trnS-UGA 35977 36209 0 233 Genome 0.006915 5 2 114 120 no 0.222222 5 0.400000 0.006949 1.000000 38.200000 trnS-UGA tRNA trnS-UGA trnS-UGA 36210 36302 -1 93 Genome 0.000000 0 0 32 27 no 0.000000 1 0.000000 0.000000 1.000000 20.800000 IGS_033 igs trnS-UGA|psbZ trnS-UGA-psbZ 36303 36670 0 368 Genome 0.013587 12 16 125 152 no 0.555556 6 0.833333 0.014198 0.956522 54.000000 psbZ gene psbZ psbZ 36671 36859 1 189 Genome 0.001176 1 0 107 14 no 0.111111 2 0.500000 0.001176 1.000000 23.100000 IGS_034 igs psbZ|trnG-UCC psbZ-trnG-UCC 36860 37156 0 297 Genome 0.013431 9 9 36 18 no 0.555556 6 0.833333 0.012262 0.993266 43.600000 IGS_035 igs trnG-UCC|trnfM-CAU trnG-UCC-trnfM-CAU 37228 37414 0 187 Genome 0.011289 5 6 52 119 no 0.333333 5 0.600000 0.011628 0.973262 40.300000 trnfM-CAU tRNA trnfM-CAU trnfM-CAU 37415 37488 -1 74 Genome 0.000000 0 0 68 45 no 0.000000 1 0.000000 0.000000 1.000000 22.100000 IGS_036 igs trnfM-CAU|rps14 trnfM-CAU-rps14 37489 37652 0 164 Genome 0.002371 1 13 142 69 no 0.222222 5 0.400000 0.002432 1.000000 35.600000 rps14 gene rps14 rps14 37653 37955 -1 303 Genome 0.002567 2 0 118 23 no 0.111111 3 0.333333 0.002567 1.000000 24.600000 IGS_037 igs rps14|psaB rps14-psaB 37956 38077 0 122 Genome 0.006375 2 0 123 112 no 0.111111 3 0.333333 0.006375 1.000000 34.200000 psaB gene psaB psaB 38078 40282 -1 2205 Genome 0.002142 11 0 44 238 no 0.666667 7 0.857143 0.002142 1.000000 40.900000 IGS_038 igs psaB|psaA psaB-psaA 40283 40307 0 25 Genome 0.000000 0 0 227 213 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 psaA gene psaA psaA 40308 42560 -1 2253 Genome 0.001381 8 0 252 300 no 0.444444 6 0.666667 0.001381 1.000000 47.800000 IGS_039 igs psaA|ycf3 psaA-ycf3 42561 43264 0 704 Genome 0.006629 10 10 300 87 no 0.333333 5 0.600000 0.006651 1.000000 44.300000 ycf3 gene ycf3 ycf3 43265 45270 -1 2006 Genome 0.004376 21 14 131 48 no 0.777778 8 0.875000 0.004396 0.996510 46.100000 IGS_040 igs ycf3|trnS-GGA ycf3-trnS-GGA 45271 46096 0 826 Genome 0.010284 18 10 184 177 yes 0.666667 7 0.857143 0.010245 0.995157 59.400000 trnS-GGA tRNA trnS-GGA trnS-GGA 46097 46183 1 87 Genome 0.000000 0 0 42 90 no 0.000000 1 0.000000 0.000000 1.000000 21.900000 IGS_041 igs trnS-GGA|rps4 trnS-GGA-rps4 46184 46495 0 312 Genome 0.004675 3 9 129 132 no 0.111111 3 0.333333 0.004753 0.990385 37.000000 rps4 gene rps4 rps4 46496 47101 -1 606 Genome 0.005867 7 0 12 47 no 0.111111 4 0.250000 0.005867 1.000000 32.100000 IGS_042 igs rps4|trnT-UGU rps4-trnT-UGU 47102 47461 0 360 Genome 0.013272 11 11 215 98 no 0.333333 5 0.600000 0.013447 1.000000 47.000000 trnT-UGU tRNA trnT-UGU trnT-UGU 47462 47534 -1 73 Genome 0.000000 0 0 50 25 no 0.000000 1 0.000000 0.000000 1.000000 20.600000 IGS_043 igs trnT-UGU|trnL-UAA trnT-UGU-trnL-UAA 47535 48306 0 772 Genome 0.021270 37 31 123 246 yes 0.666667 7 0.857143 0.021625 0.989637 66.600000 trnL-UAA_part1 tRNA trnL-UAA trnL-UAA 48307 48341 1 35 Genome 0.000000 0 0 46 211 no 0.000000 1 0.000000 0.000000 1.000000 22.200000 trnL-UAA_part2 tRNA trnL-UAA trnL-UAA 48844 48893 1 50 Genome 0.000000 0 0 132 67 no 0.000000 1 0.000000 0.000000 1.000000 23.800000 IGS_046 igs trnL-UAA|trnF-GAA trnL-UAA-trnF-GAA 48894 49254 0 361 Genome 0.005848 6 7 182 138 no 0.555556 6 0.833333 0.005889 1.000000 47.900000 trnF-GAA tRNA trnF-GAA trnF-GAA 49255 49327 1 73 Genome 0.000000 0 0 92 65 no 0.000000 1 0.000000 0.000000 1.000000 23.600000 IGS_047 igs trnF-GAA|ndhJ trnF-GAA-ndhJ 49328 49723 0 396 Genome 0.009820 10 0 165 228 no 0.555556 6 0.833333 0.009820 1.000000 51.100000 ndhJ gene ndhJ ndhJ 49724 50200 -1 477 Genome 0.004659 4 0 81 173 no 0.000000 2 0.000000 0.004659 1.000000 31.700000 IGS_048 igs ndhJ|ndhK ndhJ-ndhK 50201 50316 0 116 Genome 0.000000 0 0 29 57 no 0.000000 1 0.000000 0.000000 1.000000 20.900000 ndhK gene ndhK ndhK 50317 50994 -1 678 Genome 0.000656 2 0 145 38 no 0.222222 3 0.666667 0.000656 1.000000 32.700000 IGS_049 igs ndhK|ndhC ndhK-ndhC 50995 51040 0 46 Genome 0.012077 1 0 300 18 no 0.000000 2 0.000000 0.012077 1.000000 28.300000 ndhC gene ndhC ndhC 51041 51403 -1 363 Genome 0.002143 2 0 7 44 no 0.111111 3 0.333333 0.002143 1.000000 24.300000 IGS_050 igs ndhC|trnV-UAC ndhC-trnV-UAC 51404 52482 0 1079 Genome 0.012383 30 24 77 300 no 0.666667 7 0.857143 0.011262 0.991659 54.700000 trnV-UAC_part2 tRNA trnV-UAC trnV-UAC 52483 52517 -1 35 Genome 0.000000 0 0 12 300 no 0.000000 1 0.000000 0.000000 1.000000 19.700000 trnV-UAC_part1 tRNA trnV-UAC trnV-UAC 53086 53124 -1 39 Genome 0.000000 0 0 92 72 no 0.000000 1 0.000000 0.000000 1.000000 24.100000 IGS_053 igs trnV-UAC|trnM-CAU trnV-UAC-trnM-CAU 53125 53298 0 174 Genome 0.008621 3 0 131 91 no 0.000000 3 0.000000 0.008621 1.000000 31.600000 trnM-CAU tRNA trnM-CAU trnM-CAU 53299 53371 1 73 Genome 0.000000 0 0 34 18 no 0.000000 1 0.000000 0.000000 1.000000 20.100000 IGS_054 igs trnM-CAU|atpE trnM-CAU-atpE 53372 53557 0 186 Genome 0.009259 4 1 107 34 no 0.111111 4 0.250000 0.009301 1.000000 30.800000 atpE gene atpE atpE 53558 53980 -1 423 Genome 0.005779 5 0 6 300 no 0.111111 3 0.333333 0.005779 1.000000 27.900000 atpB gene atpB atpB 53977 55473 -1 1497 Genome 0.002338 9 0 25 102 no 0.333333 6 0.500000 0.002338 1.000000 34.900000 IGS_056 igs atpB|rbcL atpB-rbcL 55474 56236 0 763 Genome 0.005592 10 11 291 203 no 0.333333 5 0.600000 0.005077 1.000000 52.000000 rbcL gene rbcL rbcL 56237 57664 1 1428 Genome 0.003346 10 0 233 10 no 0.111111 4 0.250000 0.003346 1.000000 30.200000 IGS_057 igs rbcL|accD rbcL-accD 57665 58288 0 624 Genome 0.008504 11 24 72 17 no 0.333333 5 0.600000 0.008511 0.963141 41.900000 accD gene accD accD 58289 59758 1 1470 Genome 0.004573 16 0 1 3 no 0.555556 6 0.833333 0.004573 1.000000 38.900000 IGS_058 igs accD|psaI accD-psaI 59759 60175 0 417 Genome 0.027749 25 7 144 48 no 0.555556 6 0.833333 0.027578 1.000000 57.200000 psaI gene psaI psaI 60176 60286 1 111 Genome 0.003504 1 0 37 61 no 0.000000 2 0.000000 0.003504 1.000000 24.200000 IGS_059 igs psaI|ycf4 psaI-ycf4 60287 60707 0 421 Genome 0.002433 3 17 62 158 no 0.666667 7 0.857143 0.002474 0.961995 44.000000 ycf4 gene ycf4 ycf4 60708 61262 1 555 Genome 0.003103 4 0 183 12 no 0.111111 4 0.250000 0.003103 1.000000 29.300000 IGS_060 igs ycf4|cemA ycf4-cemA 61263 61956 0 694 Genome 0.013289 22 6 103 107 no 0.444444 6 0.666667 0.013390 0.992795 51.800000 cemA gene cemA cemA 61957 62646 1 690 Genome 0.005475 9 0 79 5 no 0.555556 6 0.833333 0.005475 1.000000 39.900000 IGS_061 igs cemA|petA cemA-petA 62647 62891 0 245 Genome 0.017460 8 0 80 55 no 0.111111 4 0.250000 0.017460 1.000000 36.900000 petA gene petA petA 62892 63854 1 963 Genome 0.003058 8 0 0 7 no 0.666667 7 0.857143 0.003058 1.000000 39.900000 IGS_062 igs petA|psbJ petA-psbJ 63855 64794 0 940 Genome 0.012837 28 30 180 86 no 0.666667 7 0.857143 0.012760 1.000000 57.100000 psbJ gene psbJ psbJ 64795 64917 -1 123 Genome 0.001807 1 0 130 300 no 0.111111 2 0.500000 0.001807 1.000000 32.400000 IGS_063 igs psbJ|psbL psbJ-psbL 64918 65055 0 138 Genome 0.000000 0 0 36 300 no 0.000000 1 0.000000 0.000000 1.000000 21.400000 psbL gene psbL psbL 65056 65172 -1 117 Genome 0.000000 0 0 174 292 no 0.000000 1 0.000000 0.000000 1.000000 31.800000 IGS_064 igs psbL|psbF psbL-psbF 65173 65194 0 22 Genome 0.000000 0 0 291 270 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 psbF gene psbF psbF 65195 65314 -1 120 Genome 0.000000 0 0 300 150 no 0.000000 1 0.000000 0.000000 1.000000 30.000000 IGS_065 igs psbF|psbE psbF-psbE 65315 65323 0 9 Genome 0.000000 0 0 300 141 no 0.000000 1 0.000000 NA 1.000000 29.300000 psbE gene psbE psbE 65324 65575 -1 252 Genome 0.000882 1 0 300 2 no 0.111111 2 0.500000 0.000882 1.000000 21.900000 IGS_066 igs psbE|petL psbE-petL 65576 66589 0 1014 Genome 0.016557 40 13 110 30 no 0.777778 8 0.875000 0.016559 0.995069 55.500000 petL gene petL petL 66590 66685 1 96 Genome 0.005787 1 0 13 127 no 0.000000 2 0.000000 0.005787 1.000000 23.600000 IGS_067 igs petL|petG petL-petG 66686 66837 0 152 Genome 0.003655 1 1 65 103 no 0.000000 2 0.000000 0.003679 1.000000 26.800000 petG gene petG petG 66838 66951 1 114 Genome 0.001949 1 0 24 104 no 0.111111 2 0.500000 0.001949 1.000000 24.600000 IGS_068 igs petG|trnW-CCA petG-trnW-CCA 66952 67080 0 129 Genome 0.003015 1 0 10 148 no 0.000000 2 0.000000 0.003015 1.000000 21.800000 trnW-CCA tRNA trnW-CCA trnW-CCA 67081 67154 -1 74 Genome 0.000000 0 0 24 74 no 0.000000 1 0.000000 0.000000 1.000000 20.600000 IGS_069 igs trnW-CCA|trnP-UGG trnW-CCA-trnP-UGG 67155 67298 0 144 Genome 0.018133 5 12 98 137 no 0.111111 4 0.250000 0.019072 1.000000 46.200000 trnP-UGG tRNA trnP-UGG trnP-UGG 67299 67372 -1 74 Genome 0.000000 0 0 31 63 no 0.000000 1 0.000000 0.000000 1.000000 21.100000 IGS_070 igs trnP-UGG|psaJ trnP-UGG-psaJ 67373 67757 0 385 Genome 0.009528 10 6 105 161 no 0.666667 7 0.857143 0.009528 0.984416 49.800000 psaJ gene psaJ psaJ 67758 67886 1 129 Genome 0.000000 0 0 86 32 no 0.000000 1 0.000000 0.000000 1.000000 21.100000 IGS_071 igs psaJ|rpl33 psaJ-rpl33 67887 68328 0 442 Genome 0.009804 12 4 215 14 no 0.666667 7 0.857143 0.009863 1.000000 44.100000 rpl33 gene rpl33 rpl33 68329 68529 1 201 Genome 0.009674 5 0 8 13 no 0.333333 5 0.600000 0.009674 1.000000 33.100000 IGS_072 igs rpl33|rps18 rpl33-rps18 68530 68690 0 161 Genome 0.009662 4 0 24 299 no 0.333333 5 0.600000 0.009662 1.000000 34.300000 rps18 gene rps18 rps18 68691 68996 1 306 Genome 0.001271 1 0 39 8 no 0.000000 2 0.000000 0.001271 1.000000 20.500000 IGS_073 igs rps18|rpl20 rps18-rpl20 68997 69228 0 232 Genome 0.011494 7 3 6 162 no 0.555556 6 0.833333 0.011569 0.995690 40.000000 rpl20 gene rpl20 rpl20 69229 69615 -1 387 Genome 0.001292 1 0 39 32 no 0.000000 2 0.000000 0.001292 1.000000 23.900000 IGS_074 igs rpl20|rps12 rpl20-rps12 69616 70377 0 762 Genome 0.009951 17 3 224 152 no 0.666667 7 0.857143 0.009279 1.000000 56.600000 rps12_part1 gene rps12 rps12 70378 70491 -1 114 Genome 0.000000 0 0 116 38 no 0.000000 1 0.000000 0.000000 1.000000 21.600000 IGS_075 igs rps12|clpP rps12-clpP 70492 70636 0 145 Genome 0.019157 6 5 230 12 no 0.111111 4 0.250000 0.019800 1.000000 39.400000 clpP gene clpP clpP 70637 72723 -1 2087 Genome 0.006801 33 57 7 19 no 1.000000 9 1.000000 0.006007 0.998563 51.200000 IGS_076 igs clpP|psbB clpP-psbB 72724 73175 0 452 Genome 0.006637 7 3 213 146 no 0.444444 6 0.666667 0.006665 0.997788 46.800000 psbB gene psbB psbB 73176 74702 1 1527 Genome 0.002037 8 0 96 10 no 0.555556 7 0.714286 0.002037 1.000000 37.700000 IGS_077 igs psbB|psbT psbB-psbT 74703 74913 0 211 Genome 0.035018 16 11 249 50 yes 0.333333 5 0.600000 0.029317 1.000000 59.500000 psbT gene psbT psbT 74914 75015 1 102 Genome 0.002179 1 0 10 8 no 0.111111 2 0.500000 0.002179 1.000000 23.600000 IGS_078 igs psbT|psbN psbT-psbN 75016 75101 0 86 Genome 0.027132 6 0 51 69 no 0.333333 5 0.600000 0.027132 1.000000 49.800000 psbN gene psbN psbN 75102 75233 -1 132 Genome 0.006313 3 0 21 91 no 0.333333 4 0.750000 0.006313 1.000000 32.300000 IGS_079 igs psbN|psbH psbN-psbH 75234 75335 0 102 Genome 0.004902 1 0 20 107 no 0.000000 2 0.000000 0.004902 1.000000 23.700000 psbH gene psbH psbH 75336 75557 1 222 Genome 0.003504 2 0 10 23 no 0.111111 3 0.333333 0.003504 1.000000 24.300000 IGS_080 igs psbH|petB psbH-petB 75558 75685 0 128 Genome 0.029080 8 0 21 69 no 0.333333 5 0.600000 0.029080 1.000000 47.500000 petB gene petB petB 75686 77074 1 1389 Genome 0.005760 19 9 14 52 no 0.666667 7 0.857143 0.005771 1.000000 43.600000 IGS_081 igs petB|petD petB-petD 77075 77254 0 180 Genome 0.006481 3 1 183 44 no 0.111111 4 0.250000 0.006509 1.000000 29.800000 petD gene petD petD 77255 78483 1 1229 Genome 0.005922 15 7 106 45 no 0.222222 5 0.400000 0.005948 1.000000 37.400000 IGS_082 igs petD|rpoA petD-rpoA 78484 78616 0 133 Genome 0.012531 3 9 87 0 no 0.000000 2 0.000000 0.013441 1.000000 32.500000 rpoA gene rpoA rpoA 78617 79678 -1 1062 Genome 0.004447 13 0 6 9 no 0.666667 7 0.857143 0.004447 1.000000 41.500000 IGS_083 igs rpoA|rps11 rpoA-rps11 79679 79745 0 67 Genome 0.012438 3 0 203 48 no 0.111111 3 0.333333 0.012438 1.000000 35.600000 rps11 gene rps11 rps11 79746 80162 -1 417 Genome 0.004130 5 0 14 61 no 0.444444 6 0.666667 0.004130 1.000000 33.900000 IGS_084 igs rps11|rpl36 rps11-rpl36 80163 80273 0 111 Genome 0.009581 3 10 12 172 no 0.444444 6 0.666667 0.008853 1.000000 41.500000 rpl36 gene rpl36 rpl36 80274 80387 -1 114 Genome 0.000000 0 0 38 58 no 0.000000 1 0.000000 0.000000 1.000000 21.600000 IGS_085 igs rpl36|infA rpl36-infA 80388 80503 0 116 Genome 0.013889 3 0 152 0 no 0.111111 4 0.250000 0.013889 1.000000 30.300000 infA gene infA infA 80504 80737 -1 234 Genome 0.003324 2 0 25 10 no 0.111111 3 0.333333 0.003324 1.000000 24.100000 IGS_086 igs infA|rps8 infA-rps8 80738 80858 0 121 Genome 0.003214 1 0 107 24 no 0.000000 2 0.000000 0.003214 1.000000 23.000000 rps8 gene rps8 rps8 80859 81263 -1 405 Genome 0.008093 9 0 110 14 no 0.555556 7 0.714286 0.008093 1.000000 38.800000 IGS_087 igs rps8|rpl14 rps8-rpl14 81264 81454 0 191 Genome 0.010180 5 1 47 3 no 0.444444 6 0.666667 0.010190 1.000000 35.800000 rpl14 gene rpl14 rpl14 81455 81823 -1 369 Genome 0.002108 2 0 25 12 no 0.111111 3 0.333333 0.002108 1.000000 24.800000 IGS_088 igs rpl14|rpl16 rpl14-rpl16 81824 81960 0 137 Genome 0.011354 4 2 180 57 no 0.444444 6 0.666667 0.011422 1.000000 41.800000 rpl16 gene rpl16 rpl16 81961 83330 -1 1370 Genome 0.007896 22 18 17 300 no 0.666667 7 0.857143 0.007920 0.989781 45.600000 IGS_089 igs rpl16|rps3 rpl16-rps3 83331 83478 0 148 Genome 0.000000 0 1 38 283 no 0.000000 2 0.000000 0.000000 1.000000 22.400000 rps3 gene rps3 rps3 83479 84135 -1 657 Genome 0.003805 6 0 186 23 no 0.111111 4 0.250000 0.003805 1.000000 31.700000 rpl22 gene rpl22 rpl22 84120 84614 -1 495 Genome 0.005948 6 0 118 5 no 0.222222 4 0.500000 0.005948 1.000000 31.500000 IGS_091 igs rpl22|rps19 rpl22-rps19 84615 84680 0 66 Genome 0.011063 3 7 13 39 no 0.444444 5 0.800000 0.009759 1.000000 44.200000 rps19 gene rps19 rps19 84681 84959 -1 279 Genome 0.008961 6 0 18 24 no 0.444444 6 0.666667 0.008961 1.000000 35.200000 IGS_092 igs rps19|rpl2 rps19-rpl2 84960 85017 0 58 Genome 0.011494 3 4 49 18 no 0.444444 6 0.666667 0.011805 0.965517 45.200000 rpl2 gene rpl2 rpl2 85018 86493 -1 1476 Genome 0.005458 22 1 11 278 no 0.777778 8 0.875000 0.005458 1.000000 44.800000 IGS_093 igs rpl2|rpl23 rpl2-rpl23 86494 86511 0 18 Genome 0.000000 0 0 195 260 no 0.000000 1 0.000000 NA 1.000000 33.400000 rpl23 gene rpl23 rpl23 86512 86793 -1 282 Genome 0.001970 1 0 213 14 no 0.000000 2 0.000000 0.001970 1.000000 21.100000 IGS_094 igs rpl23|trnI-CAU rpl23-trnI-CAU 86794 86954 0 161 Genome 0.004831 2 0 21 85 no 0.000000 3 0.000000 0.004831 1.000000 24.100000 trnI-CAU tRNA trnI-CAU trnI-CAU 86955 87028 -1 74 Genome 0.000000 0 0 37 11 no 0.000000 1 0.000000 0.000000 1.000000 19.600000 IGS_095 igs trnI-CAU|ycf2 trnI-CAU-ycf2 87029 87142 0 114 Genome 0.038708 9 26 111 15 no 0.333333 5 0.600000 0.031328 0.947368 56.700000 ycf2 gene ycf2 ycf2 87143 93478 1 6336 Genome 0.010114 154 222 19 11 no 1.000000 9 1.000000 0.010156 0.995739 49.900000 IGS_096 igs ycf2|trnL-CAA ycf2-trnL-CAA 93479 94110 0 632 Genome 0.108122 128 15 146 92 yes 0.777778 8 0.875000 0.110356 1.000000 84.200000 trnL-CAA tRNA trnL-CAA trnL-CAA 94111 94191 -1 81 Genome 0.000000 0 0 39 11 no 0.000000 1 0.000000 0.000000 1.000000 19.600000 IGS_097 igs trnL-CAA|ndhB trnL-CAA-ndhB 94192 94745 0 554 Genome 0.005917 9 1 120 114 no 0.333333 5 0.600000 0.005924 1.000000 43.700000 ndhB gene ndhB ndhB 94746 96960 -1 2215 Genome 0.005167 28 0 37 41 no 0.555556 6 0.833333 0.005167 1.000000 40.600000 IGS_098 igs ndhB|rps7 ndhB-rps7 96961 97258 0 298 Genome 0.008389 7 1 281 81 no 0.333333 5 0.600000 0.008399 1.000000 38.200000 rps7 gene rps7 rps7 97259 97726 -1 468 Genome 0.007479 9 0 4 52 no 0.555556 6 0.833333 0.007479 1.000000 38.700000 IGS_099 igs rps7|rps12 rps7-rps12 97727 97781 0 55 Genome 0.009091 1 0 40 113 no 0.000000 2 0.000000 0.009091 1.000000 28.100000 rps12_part2 gene rps12 rps12 97782 98575 -1 794 Genome 0.001959 4 0 2 112 no 0.222222 4 0.500000 0.001959 1.000000 30.800000 IGS_100 igs rps12|ycf15 rps12-ycf15 98576 99572 0 997 Genome 0.012729 33 41 300 10 no 0.555556 6 0.833333 0.012777 0.969910 49.900000 ycf15 gene ycf15 ycf15 99573 99764 -1 192 Genome 0.013021 6 0 16 59 no 0.222222 4 0.500000 0.013021 1.000000 33.900000 IGS_101 igs ycf15|trnV-GAC ycf15-trnV-GAC 99765 100451 0 687 Genome 0.010917 19 7 105 35 no 0.555556 6 0.833333 0.011015 0.991266 47.400000 trnV-GAC tRNA trnV-GAC trnV-GAC 100452 100523 1 72 Genome 0.007716 1 0 10 300 no 0.000000 2 0.000000 0.007716 1.000000 24.700000 IGS_102 igs trnV-GAC|rrn16 trnV-GAC-rrn16 100524 102293 0 1770 Genome 0.021918 75 1555 36 300 yes 0.555556 6 0.833333 0.015913 0.942373 52.000000 rrn16 rRNA rrn16 rrn16 102294 103784 1 1491 Genome 0.000298 2 0 152 52 no 0.222222 3 0.666667 0.000298 1.000000 33.400000 IGS_103 igs rrn16|trnI-GAU rrn16-trnI-GAU 103785 104078 0 294 Genome 0.000756 1 0 300 300 no 0.111111 2 0.500000 0.000756 1.000000 36.600000 trnI-GAU_part1 tRNA trnI-GAU trnI-GAU 104079 104115 1 37 Genome 0.000000 0 0 241 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 trnI-GAU_part2 tRNA trnI-GAU trnI-GAU 105064 105098 1 35 Genome 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_106 igs trnI-GAU|trnA-UGC trnI-GAU-trnA-UGC 105099 105162 0 64 Genome 0.000000 0 0 300 252 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 trnA-UGC_part1 tRNA trnA-UGC trnA-UGC 105163 105200 1 38 Genome 0.000000 0 0 300 214 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 trnA-UGC_part2 tRNA trnA-UGC trnA-UGC 106014 106048 1 35 Genome 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_109 igs trnA-UGC|rrn23 trnA-UGC-rrn23 106049 106209 0 161 Genome 0.000000 0 9 300 300 no 0.111111 2 0.500000 0.000000 0.944099 39.800000 rrn23 rRNA rrn23 rrn23 106210 109023 -1 2814 Genome 0.000000 0 0 300 14 no 0.000000 1 0.000000 0.000000 1.000000 23.300000 IGS_110 igs rrn23|rrn4.5 rrn23-rrn4.5 109024 109121 0 98 Genome 0.004535 2 0 300 249 no 0.222222 3 0.666667 0.004535 1.000000 42.500000 rrn4.5 rRNA rrn4.5 rrn4.5 109122 109224 1 103 Genome 0.000000 0 0 75 146 no 0.000000 1 0.000000 0.000000 1.000000 24.400000 IGS_111 igs rrn4.5|rrn5 rrn4.5-rrn5 109225 109450 0 226 Genome 0.002458 1 10 178 300 no 0.000000 2 0.000000 0.002572 1.000000 38.700000 rrn5 rRNA rrn5 rrn5 109451 109571 1 121 Genome 0.000000 0 0 79 300 no 0.000000 1 0.000000 0.000000 1.000000 24.700000 IGS_112 igs rrn5|trnR-ACG rrn5-trnR-ACG 109572 109819 0 248 Genome 0.000000 0 0 200 210 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 trnR-ACG tRNA trnR-ACG trnR-ACG 109820 109893 1 74 Genome 0.000000 0 0 300 136 no 0.000000 1 0.000000 0.000000 1.000000 28.900000 IGS_113 igs trnR-ACG|trnN-GUU trnR-ACG-trnN-GUU 109894 110489 0 596 Genome 0.002659 4 13 300 86 no 0.222222 4 0.500000 0.002668 0.978188 39.400000 trnN-GUU tRNA trnN-GUU trnN-GUU 110490 110561 1 72 Genome 0.000000 0 0 197 14 no 0.000000 1 0.000000 0.000000 1.000000 19.800000 IGS_114 igs trnN-GUU|ycf1 trnN-GUU-ycf1 110562 110888 0 327 Genome 0.006796 4 0 269 300 no 0.000000 2 0.000000 0.006796 1.000000 38.900000 ycf1 gene ycf1 ycf1 110889 112802 1 1914 Genome 0.009519 38 33 224 2 no 1.000000 9 1.000000 0.007744 0.984326 51.400000 IGS_115 igs ycf1|ndhF ycf1-ndhF 112803 112833 0 31 Genome 0.121352 9 18 12 12 yes 0.333333 5 0.600000 0.145394 0.935484 62.300000 ndhF gene ndhF ndhF 112834 115071 -1 2238 Genome 0.007919 47 12 6 17 yes 0.666667 7 0.857143 0.007938 1.000000 43.200000 IGS_116 igs ndhF|rpl32 ndhF-rpl32 115072 116039 0 968 Genome 0.020193 45 126 116 62 yes 1.000000 9 1.000000 0.019151 0.966942 67.400000 rpl32 gene rpl32 rpl32 116040 116201 1 162 Genome 0.004801 2 0 16 9 no 0.111111 3 0.333333 0.004801 1.000000 25.200000 IGS_117 igs rpl32|trnL-UAG rpl32-trnL-UAG 116202 117121 0 920 Genome 0.015839 34 80 90 82 yes 0.777778 8 0.875000 0.014885 0.980435 62.300000 trnL-UAG tRNA trnL-UAG trnL-UAG 117122 117201 1 80 Genome 0.000000 0 0 19 2 no 0.000000 1 0.000000 0.000000 1.000000 18.900000 IGS_118 igs trnL-UAG|ccsA trnL-UAG-ccsA 117202 117297 0 96 Genome 0.037037 10 2 99 191 yes 0.444444 6 0.666667 0.037653 1.000000 66.000000 ccsA gene ccsA ccsA 117298 118272 1 975 Genome 0.005185 14 0 4 16 yes 0.666667 7 0.857143 0.005185 1.000000 41.900000 IGS_119 igs ccsA|ndhD ccsA-ndhD 118273 118501 0 229 Genome 0.048580 22 7 42 69 yes 0.666667 7 0.857143 0.048798 0.969432 70.900000 ndhD gene ndhD ndhD 118502 120004 -1 1503 Genome 0.003216 15 0 52 26 no 1.000000 9 1.000000 0.003216 1.000000 48.400000 IGS_120 igs ndhD|psaC ndhD-psaC 120005 120119 0 115 Genome 0.015459 5 0 1 144 no 0.444444 6 0.666667 0.015459 1.000000 39.500000 psaC gene psaC psaC 120120 120365 -1 246 Genome 0.001581 1 0 3 107 no 0.000000 2 0.000000 0.001581 1.000000 20.200000 IGS_121 igs psaC|ndhE psaC-ndhE 120366 120631 0 266 Genome 0.008563 5 10 101 90 no 0.333333 5 0.600000 0.008685 1.000000 42.400000 ndhE gene ndhE ndhE 120632 120937 -1 306 Genome 0.005447 4 0 66 8 no 0.333333 5 0.600000 0.005447 1.000000 29.800000 IGS_122 igs ndhE|ndhG ndhE-ndhG 120938 121156 0 219 Genome 0.007900 4 3 11 42 no 0.333333 5 0.600000 0.007964 0.990868 33.000000 ndhG gene ndhG ndhG 121157 121687 -1 531 Genome 0.008265 9 0 17 27 no 0.111111 4 0.250000 0.008265 1.000000 32.800000 IGS_123 igs ndhG|ndhI ndhG-ndhI 121688 122042 0 355 Genome 0.017293 14 1 9 220 no 0.777778 8 0.875000 0.017337 1.000000 48.200000 ndhI gene ndhI ndhI 122043 122546 -1 504 Genome 0.003417 4 7 62 2 no 0.111111 4 0.250000 0.003451 1.000000 29.300000 IGS_124 igs ndhI|ndhA ndhI-ndhA 122547 122638 0 92 Genome 0.002415 1 0 98 199 no 0.111111 2 0.500000 0.002415 1.000000 30.600000 ndhA gene ndhA ndhA 122639 124794 -1 2156 Genome 0.008104 38 5 89 128 no 0.666667 7 0.857143 0.008120 1.000000 48.900000 IGS_125 igs ndhA|ndhH ndhA-ndhH 124795 124795 0 1 Genome 0.000000 0 0 92 127 no 0.000000 1 0.000000 NA 1.000000 25.700000 ndhH gene ndhH ndhH 124796 125977 -1 1182 Genome 0.004935 15 0 93 67 no 0.666667 7 0.857143 0.004935 1.000000 46.300000 IGS_126 igs ndhH|rps15 ndhH-rps15 125978 126068 0 91 Genome 0.012821 3 0 13 84 no 0.222222 4 0.500000 0.012821 1.000000 33.800000 rps15 gene rps15 rps15 126069 126341 -1 273 Genome 0.009768 6 0 2 30 no 0.222222 5 0.400000 0.009768 1.000000 30.200000 IGS_127 igs rps15|ycf1 rps15-ycf1 126342 126697 0 356 Genome 0.015918 15 9 27 26 no 0.555556 7 0.714286 0.016245 1.000000 47.500000 ycf1 gene ycf1 ycf1 126698 132169 -1 5472 Genome 0.009266 123 18 12 224 no 1.000000 9 1.000000 0.009222 0.997807 45.700000 IGS_128 igs ycf1|trnN-GUU ycf1-trnN-GUU 132170 132496 0 327 Genome 0.006796 4 0 300 269 no 0.000000 2 0.000000 0.006796 1.000000 38.900000 trnN-GUU tRNA trnN-GUU trnN-GUU 132497 132568 1 72 Genome 0.000000 0 0 14 197 no 0.000000 1 0.000000 0.000000 1.000000 19.800000 IGS_129 igs trnN-GUU|trnR-ACG trnN-GUU-trnR-ACG 132569 133164 0 596 Genome 0.002659 4 13 86 300 no 0.222222 4 0.500000 0.002668 0.978188 39.400000 trnR-ACG tRNA trnR-ACG trnR-ACG 133165 133238 -1 74 Genome 0.000000 0 0 136 300 no 0.000000 1 0.000000 0.000000 1.000000 28.900000 IGS_130 igs trnR-ACG|rrn5 trnR-ACG-rrn5 133239 133486 0 248 Genome 0.000000 0 0 210 200 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rrn5 rRNA rrn5 rrn5 133487 133607 -1 121 Genome 0.000000 0 0 300 79 no 0.000000 1 0.000000 0.000000 1.000000 24.700000 IGS_131 igs rrn5|rrn4.5 rrn5-rrn4.5 133608 133833 0 226 Genome 0.002458 1 10 300 178 no 0.000000 2 0.000000 0.002572 1.000000 38.700000 rrn4.5 rRNA rrn4.5 rrn4.5 133834 133936 -1 103 Genome 0.000000 0 0 146 75 no 0.000000 1 0.000000 0.000000 1.000000 24.400000 IGS_132 igs rrn4.5|rrn23 rrn4.5-rrn23 133937 134034 0 98 Genome 0.004535 2 0 249 300 no 0.222222 3 0.666667 0.004535 1.000000 42.500000 rrn23 rRNA rrn23 rrn23 134035 136848 -1 2814 Genome 0.000000 0 0 14 300 no 0.000000 1 0.000000 0.000000 1.000000 23.300000 IGS_133 igs rrn23|trnA-UGC rrn23-trnA-UGC 136849 137009 0 161 Genome 0.000000 0 9 300 300 no 0.111111 2 0.500000 0.000000 0.944099 39.800000 trnA-UGC_part2 tRNA trnA-UGC trnA-UGC 137010 137044 -1 35 Genome 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 trnA-UGC_part1 tRNA trnA-UGC trnA-UGC 137858 137895 -1 38 Genome 0.000000 0 0 214 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_136 igs trnA-UGC|trnI-GAU trnA-UGC-trnI-GAU 137896 137959 0 64 Genome 0.000000 0 0 252 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 trnI-GAU_part2 tRNA trnI-GAU trnI-GAU 137960 137994 -1 35 Genome 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 trnI-GAU_part1 tRNA trnI-GAU trnI-GAU 138943 138979 -1 37 Genome 0.000000 0 0 300 241 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_139 igs trnI-GAU|rrn16 trnI-GAU-rrn16 138980 139273 0 294 Genome 0.000756 1 0 300 300 no 0.111111 2 0.500000 0.000756 1.000000 36.600000 rrn16 rRNA rrn16 rrn16 139274 140763 -1 1490 Genome 0.000298 2 0 52 153 no 0.222222 3 0.666667 0.000298 1.000000 33.400000 IGS_140 igs rrn16|trnH-GUG rrn16-trnH-GUG 140764 13 0 1198 Genome 0.062599 137 772 300 55 no 0.555556 6 0.833333 0.116655 0.915693 73.500000