feature_id feature_type parent_gene label_name start end strand length_bp region pi variable_sites indel_sites conserved_left_bp conserved_right_bp primer_available species_resolution unique_haplotype_count species_specific_haplotype_ratio interspecific_divergence alignment_reliability markerseek_score trnH-GUG tRNA trnH-GUG trnH-GUG 9 82 -1 74 Genome 0.002510 1 56 10 51 no 0.160000 6 0.666667 0.002696 1.000000 26.500000 IGS_001 igs trnH-GUG|psbA trnH-GUG-psbA 83 307 0 225 Genome 0.027477 35 17 84 45 no 0.840000 22 0.954545 0.027344 0.995556 68.800000 psbA gene psbA psbA 308 1369 -1 1062 Genome 0.003484 17 0 56 19 no 0.360000 11 0.818182 0.003484 1.000000 36.700000 IGS_002 igs psbA|trnK-UUU psbA-trnK-UUU 1370 1703 0 334 Genome 0.042419 62 46 36 209 yes 1.000000 25 1.000000 0.032573 0.946108 76.200000 trnK-UUU_part2 tRNA trnK-UUU trnK-UUU 1704 1732 -1 29 Genome 0.000000 0 0 4 180 no 0.000000 1 0.000000 0.000000 1.000000 19.100000 matK gene matK matK 1951 3468 -1 1518 Genome 0.007562 78 33 37 10 no 0.880000 23 0.956522 0.007619 1.000000 54.700000 IGS_005 igs matK|trnK-UUU matK-trnK-UUU 3469 4141 0 673 Genome 0.009459 37 9 105 66 no 0.720000 20 0.900000 0.009463 1.000000 56.200000 trnK-UUU_part1 tRNA trnK-UUU trnK-UUU 4142 4177 -1 36 Genome 0.000000 0 0 184 30 no 0.000000 1 0.000000 0.000000 1.000000 21.000000 IGS_006 igs trnK-UUU|rbcL trnK-UUU-rbcL 4178 5070 0 893 Genome 0.026493 133 65 220 82 yes 1.000000 25 1.000000 0.026272 0.993281 80.200000 rbcL gene rbcL rbcL 5071 6498 -1 1428 Genome 0.008021 45 0 15 35 no 0.520000 17 0.764706 0.008021 1.000000 43.400000 IGS_007 igs rbcL|atpB rbcL-atpB 6499 7248 0 750 Genome 0.017253 71 62 35 10 no 1.000000 25 1.000000 0.017439 1.000000 70.200000 atpB gene atpB atpB 7249 8727 1 1479 Genome 0.007221 60 17 33 35 no 0.760000 21 0.904762 0.007271 1.000000 51.400000 IGS_008 igs atpB|atpE atpB-atpE 8728 8754 0 27 Genome 0.002963 1 0 13 8 no 0.040000 2 0.500000 0.002963 1.000000 26.100000 atpE gene atpE atpE 8755 9156 1 402 Genome 0.008557 19 0 40 18 no 0.200000 7 0.714286 0.008557 1.000000 35.700000 IGS_009 igs atpE|trnM-CAU atpE-trnM-CAU 9157 9259 0 103 Genome 0.027346 24 3 10 154 no 0.320000 10 0.800000 0.027784 1.000000 53.900000 trnM-CAU tRNA trnM-CAU trnM-CAU 9260 9332 -1 73 Genome 0.000000 0 0 27 81 no 0.000000 1 0.000000 0.000000 1.000000 20.800000 IGS_010 igs trnM-CAU|trnC-ACA trnM-CAU-trnC-ACA 9333 9496 0 164 Genome 0.007728 9 8 100 78 no 0.360000 13 0.692308 0.007702 1.000000 47.600000 trnC-ACA_part2 tRNA trnC-ACA trnC-ACA 9497 9536 -1 40 Genome 0.007667 2 0 14 38 no 0.000000 2 0.000000 0.007667 1.000000 29.500000 trnC-ACA_part1 tRNA trnC-ACA trnC-ACA 10153 10187 -1 35 Genome 0.018286 3 0 61 11 no 0.040000 3 0.333333 0.018286 1.000000 39.300000 IGS_013 igs trnC-ACA|ndhC trnC-ACA-ndhC 10188 10545 0 358 Genome 0.033048 70 59 1 275 no 0.800000 22 0.909091 0.031934 0.994413 68.000000 ndhC gene ndhC ndhC 10546 10908 1 363 Genome 0.005106 13 0 12 80 no 0.200000 9 0.555556 0.005106 1.000000 31.500000 IGS_014 igs ndhC|ndhK ndhC-ndhK 10909 10950 0 42 Genome 0.000000 0 0 87 38 no 0.000000 1 0.000000 0.000000 1.000000 21.600000 ndhK gene ndhK ndhK 10951 11625 1 675 Genome 0.008535 30 7 129 1 no 0.520000 17 0.764706 0.008526 0.991111 45.100000 IGS_015 igs ndhK|ndhJ ndhK-ndhJ 11626 11766 0 141 Genome 0.020473 19 1 7 56 no 0.360000 10 0.900000 0.020483 1.000000 48.600000 ndhJ gene ndhJ ndhJ 11767 12243 1 477 Genome 0.005451 15 0 30 48 no 0.320000 11 0.727273 0.005451 1.000000 37.100000 IGS_016 igs ndhJ|trnF-GAA ndhJ-trnF-GAA 12244 12943 0 700 Genome 0.026292 101 288 9 121 no 1.000000 25 1.000000 0.026834 0.991429 73.600000 trnF-GAA tRNA trnF-GAA trnF-GAA 12944 13016 -1 73 Genome 0.000000 0 0 22 48 no 0.000000 1 0.000000 0.000000 1.000000 20.400000 IGS_017 igs trnF-GAA|trnL-UAA trnF-GAA-trnL-UAA 13017 13223 0 207 Genome 0.016250 24 75 95 114 no 0.440000 16 0.687500 0.017800 0.975845 58.800000 trnL-UAA_part2 tRNA trnL-UAA trnL-UAA 13224 13274 -1 51 Genome 0.001569 1 0 29 63 no 0.040000 2 0.500000 0.001569 1.000000 24.800000 trnL-UAA_part1 tRNA trnL-UAA trnL-UAA 13695 13729 -1 35 Genome 0.006286 1 1 103 2 no 0.040000 3 0.333333 0.006471 1.000000 29.500000 IGS_020 igs trnL-UAA|trnT-UGU trnL-UAA-trnT-UGU 13730 14790 0 1061 Genome 0.028706 171 313 2 82 no 1.000000 25 1.000000 0.028688 0.995287 74.600000 trnT-UGU tRNA trnT-UGU trnT-UGU 14791 14865 1 75 Genome 0.000000 0 0 16 7 no 0.000000 1 0.000000 0.000000 1.000000 19.300000 IGS_021 igs trnT-UGU|rps4 trnT-UGU-rps4 14866 15158 0 293 Genome 0.014976 34 78 91 249 no 0.680000 18 0.944444 0.015679 1.000000 63.300000 rps4 gene rps4 rps4 15159 15764 1 606 Genome 0.007404 29 12 13 29 no 0.400000 12 0.833333 0.007452 1.000000 45.200000 IGS_022 igs rps4|trnS-GGA rps4-trnS-GGA 15765 15966 0 202 Genome 0.015329 16 4 84 114 no 0.280000 10 0.700000 0.015197 1.000000 49.500000 trnS-GGA tRNA trnS-GGA trnS-GGA 15967 16055 -1 89 Genome 0.000000 0 0 8 25 no 0.000000 1 0.000000 0.000000 1.000000 19.400000 IGS_023 igs trnS-GGA|ycf3 trnS-GGA-ycf3 16056 16278 0 223 Genome 0.025056 25 15 97 157 no 0.400000 13 0.769231 0.025116 0.995516 63.300000 ycf3 gene ycf3 ycf3 16279 18243 1 1965 Genome 0.008064 92 35 25 99 no 1.000000 25 1.000000 0.008087 0.998982 56.300000 IGS_024 igs ycf3|psaA ycf3-psaA 18244 19113 0 870 Genome 0.013108 73 208 12 300 no 1.000000 25 1.000000 0.013549 0.997701 66.800000 psaA gene psaA psaA 19114 21387 1 2274 Genome 0.004881 63 0 78 300 no 0.640000 19 0.842105 0.004881 1.000000 46.900000 IGS_025 igs psaA|psaB psaA-psaB 21388 21412 0 25 Genome 0.000000 0 0 189 300 no 0.000000 1 0.000000 0.000000 1.000000 32.900000 psaB gene psaB psaB 21413 23617 1 2205 Genome 0.004535 59 0 214 3 no 0.640000 19 0.842105 0.004535 1.000000 41.100000 IGS_026 igs psaB|rps14 psaB-rps14 23618 23740 0 123 Genome 0.021572 14 0 45 90 no 0.200000 10 0.500000 0.021572 1.000000 48.100000 rps14 gene rps14 rps14 23741 24043 1 303 Genome 0.007107 14 0 65 0 no 0.200000 8 0.625000 0.007107 1.000000 31.500000 IGS_027 igs rps14|trnfM-CAU rps14-trnfM-CAU 24044 24198 0 155 Genome 0.007054 6 1 39 72 no 0.160000 6 0.666667 0.007094 1.000000 33.500000 trnfM-CAU tRNA trnfM-CAU trnfM-CAU 24199 24273 1 75 Genome 0.010429 6 3 44 12 no 0.160000 6 0.666667 0.010319 1.000000 42.300000 IGS_028 igs trnfM-CAU|trnG-GCC trnfM-CAU-trnG-GCC 24274 24397 0 124 Genome 0.066313 31 31 2 0 no 0.600000 19 0.789474 0.068975 0.935484 68.100000 trnG-GCC tRNA trnG-GCC trnG-GCC 24398 24479 -1 82 Genome 0.003836 1 9 7 47 no 0.040000 3 0.333333 0.003836 0.890244 24.900000 IGS_029 igs trnG-GCC|psbZ trnG-GCC-psbZ 24480 25381 0 902 Genome 0.071513 310 671 81 138 yes 1.000000 25 1.000000 0.057525 0.868071 83.200000 psbZ gene psbZ psbZ 25382 25570 -1 189 Genome 0.003139 4 0 7 95 no 0.080000 5 0.400000 0.003139 1.000000 24.800000 IGS_030 igs psbZ|trnS-UGA psbZ-trnS-UGA 25571 25909 0 339 Genome 0.012339 26 7 50 26 no 0.520000 16 0.812500 0.012280 1.000000 48.900000 trnS-UGA tRNA trnS-UGA trnS-UGA 25910 25998 1 89 Genome 0.003146 1 1 0 15 no 0.040000 3 0.333333 0.003148 1.000000 23.700000 IGS_031 igs trnS-UGA|psbC trnS-UGA-psbC 25999 26203 0 205 Genome 0.046607 39 38 62 195 yes 0.760000 22 0.863636 0.047494 1.000000 76.800000 psbC gene psbC psbC 26204 27625 -1 1422 Genome 0.005225 46 0 48 112 no 0.600000 16 0.937500 0.005225 1.000000 46.200000 psbD gene psbD psbD 27573 28634 -1 1062 Genome 0.003842 22 0 231 37 no 0.440000 13 0.846154 0.003842 1.000000 40.300000 IGS_033 igs psbD|trnT-GGU psbD-trnT-GGU 28635 29454 0 820 Genome 0.018046 100 152 83 122 no 0.920000 24 0.958333 0.018145 1.000000 74.900000 trnT-GGU tRNA trnT-GGU trnT-GGU 29455 29530 -1 76 Genome 0.000000 0 1 2 46 no 0.040000 2 0.500000 0.000000 1.000000 21.300000 IGS_034 igs trnT-GGU|trnE-UUC trnT-GGU-trnE-UUC 29531 29980 0 450 Genome 0.029464 74 55 78 76 no 0.840000 23 0.913043 0.027936 0.997778 74.800000 IGS_035 igs trnE-UUC|trnY-GUA trnE-UUC-trnY-GUA 30056 30127 0 72 Genome 0.017319 7 11 80 126 no 0.200000 10 0.500000 0.017374 1.000000 54.300000 trnY-GUA tRNA trnY-GUA trnY-GUA 30128 30213 1 86 Genome 0.000000 0 0 14 40 no 0.000000 1 0.000000 0.000000 1.000000 19.800000 IGS_036 igs trnY-GUA|trnD-GUC trnY-GUA-trnD-GUC 30214 30686 0 473 Genome 0.036977 92 161 100 154 yes 1.000000 25 1.000000 0.036673 0.989429 82.800000 trnD-GUC tRNA trnD-GUC trnD-GUC 30687 30762 1 76 Genome 0.002018 1 0 41 78 no 0.000000 2 0.000000 0.002018 1.000000 24.400000 IGS_037 igs trnD-GUC|psbM trnD-GUC-psbM 30763 31176 0 414 Genome 0.014497 37 63 117 99 no 0.720000 21 0.857143 0.015634 1.000000 65.400000 psbM gene psbM psbM 31177 31281 1 105 Genome 0.002095 1 0 29 13 no 0.000000 2 0.000000 0.002095 1.000000 21.900000 IGS_038 igs psbM|petN psbM-petN 31282 31919 0 638 Genome 0.013928 62 182 5 111 no 0.920000 24 0.958333 0.016382 1.000000 65.900000 petN gene petN petN 31920 32009 -1 90 Genome 0.001778 2 0 21 21 no 0.080000 3 0.666667 0.001778 1.000000 25.400000 IGS_039 igs petN|trnC-GCA petN-trnC-GCA 32010 32946 0 937 Genome 0.025680 139 354 111 75 yes 1.000000 25 1.000000 0.027293 0.942369 77.000000 trnC-GCA tRNA trnC-GCA trnC-GCA 32947 33017 -1 71 Genome 0.000000 0 0 4 4 no 0.000000 1 0.000000 0.000000 1.000000 19.100000 IGS_040 igs trnC-GCA|rpoB trnC-GCA-rpoB 33018 34216 0 1199 Genome 0.022123 142 347 75 65 yes 1.000000 25 1.000000 0.021421 0.984987 76.100000 rpoB gene rpoB rpoB 34217 37429 1 3213 Genome 0.007130 148 21 3 300 no 1.000000 25 1.000000 0.007135 1.000000 50.300000 IGS_041 igs rpoB|rpoC1 rpoB-rpoC1 37430 37455 0 26 Genome 0.003077 1 0 150 275 no 0.040000 2 0.500000 0.003077 1.000000 36.900000 rpoC1 gene rpoC1 rpoC1 37456 40266 1 2811 Genome 0.009311 181 55 176 42 no 0.920000 24 0.958333 0.009366 0.997866 57.300000 IGS_042 igs rpoC1|rpoC2 rpoC1-rpoC2 40267 40439 0 173 Genome 0.012171 10 36 12 209 no 0.280000 10 0.700000 0.012093 1.000000 43.600000 rpoC2 gene rpoC2 rpoC2 40440 44597 1 4158 Genome 0.011438 299 22 91 5 no 1.000000 25 1.000000 0.011435 1.000000 54.000000 IGS_043 igs rpoC2|rps2 rpoC2-rps2 44598 44879 0 282 Genome 0.034425 42 26 8 47 no 1.000000 25 1.000000 0.026803 0.985816 71.700000 rps2 gene rps2 rps2 44880 45590 1 711 Genome 0.008378 38 0 22 0 no 0.320000 11 0.727273 0.008378 1.000000 41.500000 IGS_044 igs rps2|atpI rps2-atpI 45591 45814 0 224 Genome 0.016585 21 5 120 35 no 0.400000 15 0.666667 0.016020 1.000000 50.800000 atpI gene atpI atpI 45815 46558 1 744 Genome 0.006550 26 0 23 3 no 0.400000 15 0.666667 0.006550 1.000000 40.000000 IGS_045 igs atpI|atpH atpI-atpH 46559 47450 0 892 Genome 0.022911 121 291 9 168 no 1.000000 25 1.000000 0.023602 1.000000 72.800000 atpH gene atpH atpH 47451 47696 1 246 Genome 0.006070 10 0 79 5 no 0.160000 7 0.571429 0.006070 1.000000 29.900000 IGS_046 igs atpH|atpF atpH-atpF 47697 48152 0 456 Genome 0.038469 96 86 45 29 no 0.880000 23 0.956522 0.034386 0.942982 74.100000 atpF gene atpF atpF 48153 49424 1 1272 Genome 0.008040 60 35 1 5 no 0.720000 20 0.900000 0.008081 1.000000 51.500000 IGS_047 igs atpF|atpA atpF-atpA 49425 49521 0 97 Genome 0.014089 8 31 141 38 no 0.360000 15 0.600000 0.017016 1.000000 48.600000 atpA gene atpA atpA 49522 51039 1 1518 Genome 0.014027 95 0 16 0 no 1.000000 25 1.000000 0.014027 1.000000 57.800000 IGS_048 igs atpA|trnR-UCU atpA-trnR-UCU 51040 51068 0 29 Genome 0.128032 17 4 2 4 no 0.200000 6 0.833333 0.135893 1.000000 63.500000 trnR-UCU tRNA trnR-UCU trnR-UCU 51069 51140 -1 72 Genome 0.007778 2 0 3 22 no 0.000000 2 0.000000 0.007778 1.000000 25.900000 IGS_049 igs trnR-UCU|trnG-UCC trnR-UCU-trnG-UCC 51141 51274 0 134 Genome 0.018010 12 1 3 133 no 0.360000 12 0.750000 0.018017 1.000000 45.900000 trnG-UCC_part2 tRNA trnG-UCC trnG-UCC 51275 51322 -1 48 Genome 0.001667 1 0 34 85 no 0.040000 2 0.500000 0.001667 1.000000 25.400000 trnG-UCC_part1 tRNA trnG-UCC trnG-UCC 51988 52010 -1 23 Genome 0.000000 0 0 62 41 no 0.000000 1 0.000000 0.000000 1.000000 21.800000 IGS_052 igs trnG-UCC|trnS-GCU trnG-UCC-trnS-GCU 52011 52691 0 681 Genome 0.030089 104 429 85 28 yes 1.000000 25 1.000000 0.027899 0.998532 75.100000 trnS-GCU tRNA trnS-GCU trnS-GCU 52692 52774 1 83 Genome 0.010442 4 0 5 20 no 0.000000 4 0.000000 0.010442 1.000000 29.800000 IGS_053 igs trnS-GCU|psbI trnS-GCU-psbI 52775 52943 0 169 Genome 0.026217 22 22 38 15 no 0.760000 22 0.863636 0.022200 0.994083 64.200000 psbI gene psbI psbI 52944 53054 -1 111 Genome 0.009429 5 0 13 75 no 0.080000 5 0.400000 0.009429 1.000000 31.100000 IGS_054 igs psbI|psbK psbI-psbK 53055 53384 0 330 Genome 0.018001 35 122 35 108 no 0.760000 22 0.863636 0.018697 0.987879 62.000000 psbK gene psbK psbK 53385 53570 -1 186 Genome 0.005914 5 0 81 84 no 0.080000 5 0.400000 0.005914 1.000000 32.300000 IGS_055 igs psbK|trnQ-UUG psbK-trnQ-UUG 53571 54195 0 625 Genome 0.022066 79 113 36 103 no 0.800000 22 0.909091 0.020750 0.956800 69.200000 trnQ-UUG tRNA trnQ-UUG trnQ-UUG 54196 54267 1 72 Genome 0.005509 4 0 4 31 no 0.080000 3 0.666667 0.005509 1.000000 30.000000 IGS_056 igs trnQ-UUG|accD trnQ-UUG-accD 54268 54653 0 386 Genome 0.069738 196 285 76 10 yes 1.000000 25 1.000000 0.071093 0.976684 79.200000 accD gene accD accD 54654 55823 1 1170 Genome 0.039318 295 149 8 2 yes 0.880000 23 0.956522 0.037832 0.910256 74.200000 IGS_057 igs accD|psaI accD-psaI 55824 56301 0 478 Genome 0.024758 71 81 9 39 no 0.920000 24 0.958333 0.024089 0.976987 69.200000 psaI gene psaI psaI 56302 56406 1 105 Genome 0.009778 6 0 62 21 no 0.080000 5 0.400000 0.009778 1.000000 33.400000 IGS_058 igs psaI|ycf4 psaI-ycf4 56407 56735 0 329 Genome 0.023247 42 20 62 38 no 0.680000 19 0.894737 0.023441 1.000000 64.000000 ycf4 gene ycf4 ycf4 56736 57299 1 564 Genome 0.009397 30 28 18 27 no 0.720000 20 0.900000 0.009491 1.000000 56.100000 IGS_059 igs ycf4|cemA ycf4-cemA 57300 57680 0 381 Genome 0.025497 52 278 94 102 no 0.640000 20 0.800000 0.026337 0.986877 67.700000 cemA gene cemA cemA 57681 58370 1 690 Genome 0.008435 37 0 99 38 no 0.760000 20 0.950000 0.008435 1.000000 52.600000 IGS_060 igs cemA|petA cemA-petA 58371 58587 0 217 Genome 0.015130 15 33 81 300 no 0.520000 17 0.764706 0.014754 0.912442 52.900000 petA gene petA petA 58588 59550 1 963 Genome 0.006092 42 0 78 3 no 0.600000 17 0.882353 0.006092 1.000000 44.700000 IGS_061 igs petA|psbJ petA-psbJ 59551 60198 0 648 Genome 0.026157 88 510 3 9 no 1.000000 25 1.000000 0.024081 0.998457 72.200000 psbJ gene psbJ psbJ 60199 60321 -1 123 Genome 0.010040 5 10 4 53 no 0.080000 5 0.400000 0.009968 1.000000 36.300000 IGS_062 igs psbJ|psbL psbJ-psbL 60322 60428 0 107 Genome 0.004112 3 0 48 300 no 0.080000 4 0.500000 0.004112 1.000000 29.200000 psbL gene psbL psbL 60429 60521 -1 93 Genome 0.004229 4 4 53 300 no 0.200000 8 0.625000 0.004332 0.978495 38.300000 IGS_063 igs psbL|psbF psbL-psbF 60522 60599 0 78 Genome 0.001026 1 0 146 300 no 0.040000 2 0.500000 0.001026 1.000000 32.500000 psbF gene psbF psbF 60600 60719 -1 120 Genome 0.001278 1 0 224 292 no 0.000000 2 0.000000 0.001278 1.000000 35.400000 IGS_064 igs psbF|psbE psbF-psbE 60720 60728 0 9 Genome 0.000000 0 0 300 283 no 0.000000 1 0.000000 NA 1.000000 33.800000 psbE gene psbE psbE 60729 60980 -1 252 Genome 0.000926 2 0 300 31 no 0.040000 3 0.333333 0.000926 1.000000 23.200000 IGS_065 igs psbE|petL psbE-petL 60981 62127 0 1147 Genome 0.022564 156 181 300 23 no 0.920000 24 0.958333 0.020820 0.993897 72.400000 petL gene petL petL 62128 62223 1 96 Genome 0.009097 5 0 79 16 no 0.120000 5 0.600000 0.009097 1.000000 32.800000 IGS_066 igs petL|petG petL-petG 62224 62393 0 170 Genome 0.021049 23 19 35 47 no 0.440000 14 0.785714 0.021866 1.000000 56.900000 petG gene petG petG 62394 62507 1 114 Genome 0.004503 3 0 73 27 no 0.040000 4 0.250000 0.004503 1.000000 26.800000 IGS_067 igs petG|trnW-CCA petG-trnW-CCA 62508 62646 0 139 Genome 0.021369 15 13 66 112 no 0.280000 10 0.700000 0.021930 1.000000 57.100000 trnW-CCA tRNA trnW-CCA trnW-CCA 62647 62720 -1 74 Genome 0.000000 0 0 41 38 no 0.000000 1 0.000000 0.000000 1.000000 21.600000 IGS_068 igs trnW-CCA|trnP-UGG trnW-CCA-trnP-UGG 62721 62877 0 157 Genome 0.026460 22 20 115 92 no 0.440000 15 0.733333 0.024902 1.000000 63.800000 trnP-UGG tRNA trnP-UGG trnP-UGG 62878 62950 -1 73 Genome 0.003196 2 0 34 19 no 0.040000 3 0.333333 0.003196 1.000000 25.800000 IGS_069 igs trnP-UGG|psaJ trnP-UGG-psaJ 62951 63358 0 408 Genome 0.034022 71 80 107 130 yes 1.000000 25 1.000000 0.032009 0.943627 79.300000 psaJ gene psaJ psaJ 63359 63493 1 135 Genome 0.005926 5 0 95 111 no 0.080000 6 0.333333 0.005926 1.000000 34.700000 IGS_070 igs psaJ|rpl33 psaJ-rpl33 63494 63978 0 485 Genome 0.018756 45 18 4 8 no 0.840000 23 0.913043 0.019115 0.985567 62.800000 rpl33 gene rpl33 rpl33 63979 64179 1 201 Genome 0.014262 15 0 11 15 no 0.200000 8 0.625000 0.014262 1.000000 39.100000 IGS_071 igs rpl33|rps18 rpl33-rps18 64180 64389 0 210 Genome 0.040906 46 62 18 62 no 0.920000 24 0.958333 0.038664 0.976190 72.800000 rps18 gene rps18 rps18 64390 64719 1 330 Genome 0.012283 25 3 0 3 no 0.320000 10 0.800000 0.012301 1.000000 41.500000 IGS_072 igs rps18|rpl20 rps18-rpl20 64720 64973 0 254 Genome 0.026115 34 10 33 96 no 0.600000 18 0.833333 0.026423 0.996063 61.400000 rpl20 gene rpl20 rpl20 64974 65336 -1 363 Genome 0.017245 37 0 14 41 no 0.480000 15 0.800000 0.017245 1.000000 50.400000 IGS_073 igs rpl20|rps12 rpl20-rps12 65337 66036 0 700 Genome 0.010193 46 25 48 62 no 0.680000 19 0.894737 0.010266 1.000000 58.500000 rps12_part1 gene rps12 rps12 66037 66150 -1 114 Genome 0.012105 7 0 34 7 no 0.080000 7 0.285714 0.012105 1.000000 33.900000 IGS_074 igs rps12|clpP rps12-clpP 66151 66246 0 96 Genome 0.087207 31 27 42 0 no 0.600000 17 0.882353 0.046449 0.864583 65.600000 clpP gene clpP clpP 66247 66876 -1 630 Genome 0.104825 252 178 1 2 yes 1.000000 25 1.000000 0.062967 0.892063 80.700000 IGS_075 igs clpP|psbB clpP-psbB 66877 67257 0 381 Genome 0.038269 83 58 5 84 no 0.600000 18 0.833333 0.039424 0.997375 67.600000 psbB gene psbB psbB 67258 68784 1 1527 Genome 0.005416 45 1 138 13 no 0.760000 22 0.863636 0.005416 1.000000 46.400000 IGS_076 igs psbB|psbT psbB-psbT 68785 68985 0 201 Genome 0.033031 45 73 7 97 no 0.240000 10 0.600000 0.033579 1.000000 56.000000 psbT gene psbT psbT 68986 69093 1 108 Genome 0.010679 6 0 13 29 no 0.160000 8 0.500000 0.010679 1.000000 34.500000 IGS_077 igs psbT|psbN psbT-psbN 69094 69158 0 65 Genome 0.034872 11 6 1 9 no 0.240000 8 0.750000 0.035512 1.000000 57.600000 psbN gene psbN psbN 69159 69290 -1 132 Genome 0.005051 4 0 13 231 no 0.040000 5 0.200000 0.005051 1.000000 26.500000 IGS_078 igs psbN|psbH psbN-psbH 69291 69402 0 112 Genome 0.006250 6 4 122 119 no 0.120000 6 0.500000 0.006362 1.000000 43.800000 psbH gene psbH psbH 69403 69624 1 222 Genome 0.003243 4 0 234 189 no 0.080000 4 0.500000 0.003243 1.000000 38.100000 IGS_079 igs psbH|petB psbH-petB 69625 69757 0 133 Genome 0.001805 3 0 69 56 no 0.120000 4 0.750000 0.001805 1.000000 28.800000 petB gene petB petB 69758 71207 1 1450 Genome 0.010995 67 802 202 12 no 0.680000 19 0.894737 0.008166 0.997241 51.400000 IGS_080 igs petB|petD petB-petD 71208 71403 0 196 Genome 0.010068 11 5 0 10 no 0.240000 10 0.600000 0.010253 1.000000 37.800000 petD gene petD petD 71404 72609 1 1206 Genome 0.007208 48 15 46 0 no 0.760000 21 0.904762 0.007233 1.000000 49.000000 IGS_081 igs petD|rpoA petD-rpoA 72610 72822 0 213 Genome 0.042614 71 133 45 183 no 0.600000 19 0.789474 0.041606 0.957746 68.700000 rpoA gene rpoA rpoA 72823 73824 -1 1002 Genome 0.008174 60 35 15 25 no 0.480000 16 0.750000 0.008152 1.000000 50.600000 IGS_082 igs rpoA|rps11 rpoA-rps11 73825 73905 0 81 Genome 0.018765 6 0 300 58 no 0.080000 5 0.400000 0.018765 1.000000 42.300000 rps11 gene rps11 rps11 73906 74322 -1 417 Genome 0.012990 37 6 0 42 no 0.400000 13 0.769231 0.013058 1.000000 47.400000 IGS_083 igs rps11|rpl36 rps11-rpl36 74323 74439 0 117 Genome 0.010769 8 1 138 50 no 0.160000 7 0.571429 0.010820 1.000000 39.900000 rpl36 gene rpl36 rpl36 74440 74553 -1 114 Genome 0.010234 5 0 0 4 no 0.080000 5 0.400000 0.010234 1.000000 30.300000 IGS_084 igs rpl36|rps8 rpl36-rps8 74554 74880 0 327 Genome 0.019388 36 36 43 21 no 0.600000 19 0.789474 0.020764 0.975535 58.300000 rps8 gene rps8 rps8 74881 75252 -1 372 Genome 0.013692 25 0 5 83 no 0.360000 12 0.750000 0.013692 1.000000 41.900000 IGS_085 igs rps8|rpl14 rps8-rpl14 75253 75894 0 642 Genome 0.013943 64 222 11 12 no 1.000000 25 1.000000 0.015849 0.962617 66.900000 rpl14 gene rpl14 rpl14 75895 76263 -1 369 Genome 0.011852 18 0 127 78 no 0.240000 10 0.600000 0.011852 1.000000 42.000000 IGS_086 igs rpl14|rpl16 rpl14-rpl16 76264 76380 0 117 Genome 0.005242 5 2 17 6 no 0.160000 7 0.571429 0.005311 1.000000 31.900000 rpl16 gene rpl16 rpl16 76381 77873 -1 1493 Genome 0.011226 104 127 38 9 no 0.920000 24 0.958333 0.011373 0.989283 62.200000 IGS_087 igs rpl16|rps3 rpl16-rps3 77874 78030 0 157 Genome 0.020757 17 14 35 57 no 0.280000 10 0.700000 0.020767 0.949045 52.500000 rps3 gene rps3 rps3 78031 78687 -1 657 Genome 0.012674 65 0 21 61 no 0.360000 12 0.750000 0.012674 1.000000 51.400000 IGS_088 igs rps3|rps19 rps3-rps19 78688 78864 0 177 Genome 0.020207 19 34 158 13 no 0.840000 23 0.913043 0.017804 0.960452 61.600000 rps19 gene rps19 rps19 78865 79143 -1 279 Genome 0.009068 16 0 55 63 no 0.400000 12 0.833333 0.009068 1.000000 41.600000 IGS_089 igs rps19|rpl2 rps19-rpl2 79144 79348 0 205 Genome 0.013486 18 65 50 0 no 0.520000 18 0.722222 0.013817 0.902439 46.600000 rpl2 gene rpl2 rpl2 79349 80870 -1 1522 Genome 0.010045 79 100 52 10 no 0.880000 23 0.956522 0.009852 0.995401 59.200000 IGS_090 igs rpl2|rpl23 rpl2-rpl23 80871 80890 0 20 Genome 0.018500 2 0 47 48 no 0.080000 4 0.500000 0.018500 1.000000 44.600000 rpl23 gene rpl23 rpl23 80891 81172 -1 282 Genome 0.010946 16 0 9 4 no 0.240000 8 0.750000 0.010946 1.000000 35.600000 IGS_091 igs rpl23|trnI-CAU rpl23-trnI-CAU 81173 81769 0 597 Genome 0.039911 126 270 20 88 no 0.920000 24 0.958333 0.040897 0.887772 75.100000 trnI-CAU tRNA trnI-CAU trnI-CAU 81770 81843 -1 74 Genome 0.001081 1 0 40 14 no 0.040000 2 0.500000 0.001081 1.000000 22.700000 IGS_092 igs trnI-CAU|ycf2 trnI-CAU-ycf2 81844 83930 0 2087 Genome 0.053096 445 516 114 57 yes 1.000000 25 1.000000 0.032033 0.896502 83.700000 ycf2 gene ycf2 ycf2 83931 87995 1 4065 Genome 0.016377 372 96 15 5 no 1.000000 25 1.000000 0.016308 0.999262 61.000000 IGS_093 igs ycf2|trnL-CAA ycf2-trnL-CAA 87996 88548 0 553 Genome 0.028273 76 47 14 167 no 0.920000 24 0.958333 0.029376 0.969259 72.600000 trnL-CAA tRNA trnL-CAA trnL-CAA 88549 88629 -1 81 Genome 0.001893 1 0 12 86 no 0.000000 2 0.000000 0.001893 1.000000 22.000000 IGS_094 igs trnL-CAA|ndhB trnL-CAA-ndhB 88630 89172 0 543 Genome 0.024049 73 240 93 27 no 0.920000 24 0.958333 0.024765 1.000000 71.400000 ndhB gene ndhB ndhB 89173 91340 -1 2168 Genome 0.008112 109 20 0 67 no 0.920000 24 0.958333 0.008111 1.000000 51.900000 IGS_095 igs ndhB|rps7 ndhB-rps7 91341 91625 0 285 Genome 0.027092 44 137 86 195 no 0.520000 19 0.684211 0.029631 0.971930 63.800000 rps7 gene rps7 rps7 91626 92093 -1 468 Genome 0.008533 34 0 87 11 no 0.280000 9 0.777778 0.008533 1.000000 41.200000 IGS_096 igs rps7|rps12 rps7-rps12 92094 92145 0 52 Genome 0.020128 5 0 203 300 no 0.120000 6 0.500000 0.020128 1.000000 57.100000 rps12_part2 gene rps12 rps12 92146 92403 -1 258 Genome 0.001499 3 0 33 89 no 0.080000 4 0.500000 0.001499 1.000000 24.900000 IGS_097 igs rps12|trnV-GAC rps12-trnV-GAC 92404 94517 0 2114 Genome 0.030221 297 1176 291 82 yes 1.000000 25 1.000000 0.028282 0.923368 76.100000 trnV-GAC tRNA trnV-GAC trnV-GAC 94518 94589 1 72 Genome 0.000000 0 0 16 10 no 0.000000 1 0.000000 0.000000 1.000000 19.500000 IGS_098 igs trnV-GAC|rrn16S trnV-GAC-rrn16S 94590 94823 0 234 Genome 0.029034 29 35 88 117 no 0.800000 22 0.909091 0.028852 1.000000 71.600000 rrn16S rRNA rrn16S rrn16S 94824 96313 1 1490 Genome 0.002054 26 0 49 100 no 0.280000 10 0.700000 0.002054 1.000000 37.000000 IGS_099 igs rrn16S|trnE-UUC rrn16S-trnE-UUC 96314 96531 0 218 Genome 0.027783 22 0 300 110 no 0.360000 12 0.750000 0.027783 1.000000 58.800000 trnE-UUC_part1 tRNA trnE-UUC trnE-UUC 96532 96564 1 33 Genome 0.002424 1 0 14 77 no 0.040000 2 0.500000 0.002424 1.000000 25.400000 trnE-UUC_part2 tRNA trnE-UUC trnE-UUC 97397 97425 1 29 Genome 0.012414 2 0 70 232 no 0.040000 3 0.333333 0.012414 1.000000 39.000000 IGS_102 igs trnE-UUC|trnA-UGC trnE-UUC-trnA-UGC 97426 97461 0 36 Genome 0.008704 3 0 21 196 no 0.120000 4 0.750000 0.008704 1.000000 36.900000 trnA-UGC_part1 tRNA trnA-UGC trnA-UGC 97462 97499 1 38 Genome 0.000000 0 0 57 158 no 0.000000 1 0.000000 0.000000 1.000000 23.000000 trnA-UGC_part2 tRNA trnA-UGC trnA-UGC 98344 98390 1 47 Genome 0.000000 0 0 55 3 no 0.000000 1 0.000000 0.000000 1.000000 19.000000 IGS_105 igs trnA-UGC|rrn23S trnA-UGC-rrn23S 98391 98510 0 120 Genome 0.012875 8 12 102 155 no 0.440000 13 0.846154 0.012679 1.000000 54.900000 rrn23S rRNA rrn23S rrn23S 98511 101319 1 2809 Genome 0.007787 96 19 36 70 no 0.680000 21 0.809524 0.007338 0.998220 46.300000 IGS_106 igs rrn23S|rrn4.5S rrn23S-rrn4.5S 101320 101418 0 99 Genome 0.014646 7 6 300 12 no 0.200000 8 0.625000 0.014860 1.000000 45.000000 rrn4.5S rRNA rrn4.5S rrn4.5S 101419 101522 1 104 Genome 0.008397 5 1 19 8 no 0.080000 5 0.400000 0.008467 1.000000 31.800000 IGS_107 igs rrn4.5S|rrn5S rrn4.5S-rrn5S 101523 101773 0 251 Genome 0.022490 33 40 11 95 no 0.520000 17 0.764706 0.024047 1.000000 57.300000 rrn5S rRNA rrn5S rrn5S 101774 101894 1 121 Genome 0.007383 5 0 5 2 no 0.160000 6 0.666667 0.007383 1.000000 30.400000 IGS_108 igs rrn5S|trnR-ACG rrn5S-trnR-ACG 101895 102133 0 239 Genome 0.030571 34 23 25 88 no 0.480000 15 0.800000 0.030929 1.000000 62.000000 trnR-ACG tRNA trnR-ACG trnR-ACG 102134 102208 1 75 Genome 0.000000 0 0 20 13 no 0.000000 1 0.000000 0.000000 1.000000 19.700000 IGS_109 igs trnR-ACG|trnN-GUU trnR-ACG-trnN-GUU 102209 102781 0 573 Genome 0.032883 115 421 95 8 no 0.840000 22 0.954545 0.035255 0.986038 72.000000 trnN-GUU tRNA trnN-GUU trnN-GUU 102782 102855 -1 74 Genome 0.007568 2 0 42 5 no 0.000000 2 0.000000 0.007568 1.000000 25.900000 IGS_110 igs trnN-GUU|ycf1 trnN-GUU-ycf1 102856 103513 0 658 Genome 0.091556 181 449 16 5 yes 1.000000 25 1.000000 0.043292 0.732523 75.800000 ycf1 gene ycf1 ycf1 103514 108814 1 5301 Genome 0.022660 697 358 3 2 no 1.000000 25 1.000000 0.022971 0.988681 66.100000 IGS_111 igs ycf1|rps15 ycf1-rps15 108815 109251 0 437 Genome 0.034739 80 181 24 119 no 0.920000 24 0.958333 0.034417 0.986270 73.500000 rps15 gene rps15 rps15 109252 109524 1 273 Genome 0.007363 13 0 19 300 no 0.320000 11 0.727273 0.007363 1.000000 35.400000 IGS_112 igs rps15|ndhH rps15-ndhH 109525 109621 0 97 Genome 0.001649 2 1 81 257 no 0.120000 4 0.750000 0.001650 1.000000 31.700000 ndhH gene ndhH ndhH 109622 110803 1 1182 Genome 0.003463 29 0 178 60 no 0.600000 18 0.833333 0.003463 1.000000 45.400000 IGS_113 igs ndhH|ndhA ndhH-ndhA 110804 110804 0 1 Genome 0.153333 1 0 237 59 no 0.000000 2 0.000000 NA 1.000000 58.200000 ndhA gene ndhA ndhA 110805 113093 1 2289 Genome 0.009875 129 37 238 52 no 0.920000 24 0.958333 0.009853 0.997816 57.900000 IGS_114 igs ndhA|ndhI ndhA-ndhI 113094 113171 0 78 Genome 0.007436 3 0 78 87 no 0.040000 4 0.250000 0.007436 1.000000 33.500000 ndhI gene ndhI ndhI 113172 113663 1 492 Genome 0.002744 9 17 2 30 no 0.320000 10 0.800000 0.002744 1.000000 36.700000 IGS_115 igs ndhI|ndhG ndhI-ndhG 113664 114152 0 489 Genome 0.019850 61 145 300 71 no 0.880000 23 0.956522 0.020577 0.977505 70.500000 ndhG gene ndhG ndhG 114153 114683 1 531 Genome 0.005411 17 0 27 9 no 0.320000 12 0.666667 0.005411 1.000000 36.700000 IGS_116 igs ndhG|ndhE ndhG-ndhE 114684 114896 0 213 Genome 0.010219 12 1 32 59 no 0.280000 10 0.700000 0.010245 1.000000 38.600000 ndhE gene ndhE ndhE 114897 115199 1 303 Genome 0.003630 7 4 56 27 no 0.160000 7 0.571429 0.003633 1.000000 30.000000 IGS_117 igs ndhE|psaC ndhE-psaC 115200 115495 0 296 Genome 0.016753 32 15 18 248 no 0.600000 17 0.882353 0.016272 1.000000 57.400000 psaC gene psaC psaC 115496 115741 1 246 Genome 0.000623 1 0 22 2 no 0.000000 2 0.000000 0.000623 1.000000 19.700000 IGS_118 igs psaC|ndhD psaC-ndhD 115742 115855 0 114 Genome 0.034523 15 12 268 110 no 0.440000 17 0.647059 0.035511 1.000000 69.100000 ndhD gene ndhD ndhD 115856 117376 1 1521 Genome 0.005904 55 0 4 75 no 0.600000 17 0.882353 0.005904 1.000000 43.700000 IGS_119 igs ndhD|ccsA ndhD-ccsA 117377 117665 0 289 Genome 0.011644 27 90 51 90 no 0.560000 15 0.933333 0.012543 1.000000 55.400000 ccsA gene ccsA ccsA 117666 118637 -1 972 Genome 0.010065 56 15 95 219 no 0.800000 22 0.909091 0.010044 1.000000 60.800000 IGS_120 igs ccsA|trnL-UAG ccsA-trnL-UAG 118638 118756 0 119 Genome 0.004650 6 5 102 100 no 0.200000 7 0.714286 0.004694 1.000000 43.500000 trnL-UAG tRNA trnL-UAG trnL-UAG 118757 118836 -1 80 Genome 0.000000 0 0 221 20 no 0.000000 1 0.000000 0.000000 1.000000 20.200000 IGS_121 igs trnL-UAG|rpl32 trnL-UAG-rpl32 118837 119383 0 547 Genome 0.023918 101 145 300 10 no 0.840000 22 0.954545 0.024760 1.000000 69.400000 rpl32 gene rpl32 rpl32 119384 119536 -1 153 Genome 0.007800 9 0 68 12 no 0.120000 5 0.600000 0.007800 1.000000 32.800000 IGS_122 igs rpl32|ndhF rpl32-ndhF 119537 120144 0 608 Genome 0.013140 51 58 47 71 no 0.840000 23 0.913043 0.013288 0.986842 66.200000 ndhF gene ndhF ndhF 120145 122379 1 2235 Genome 0.005916 94 23 80 43 no 0.880000 23 0.956522 0.005919 1.000000 52.400000 IGS_123 igs ndhF|trnH-GUG ndhF-trnH-GUG 122380 8 0 232 Genome 0.036782 49 68 19 125 no 1.000000 25 1.000000 0.029264 0.987069 72.700000