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clpP-psbB

LSC · 74723-75222 · 500 bp

Back to Haplophyllum

Pi 0.018

MarkerSeek score 67.20

Primer available yes

Label clpP-psbB

Feature Metadata

label_name: clpP-psbB
feature_type: igs
region: LSC
length_bp: 500
variable_sites: 9
pi: 0.018
unique_haplotype_count: 2
primer_available: yes
alignment_reliability: 1.00
markerseek_score: 67.20

Pi Curve

Haplotype Network

Species Separation

Primer Ranking

Primer ID	fwd_seq	rev_seq	fwd_gc	rev_gc	fwd_tm	rev_tm	amplicon_size	cross_species_success_rate	primer_score
clpP-psbB_p1	ACCCAAGATGGATGCTTGTC	GCCGGGATCATTCAATACGA	50.0	50.0	57.9	57.8	613-634 bp	1.0	78.9
clpP-psbB_p2	GTCAACCCAAGATGGATGCT	GCCGGGATCATTCAATACGA	50.0	50.0	57.9	57.8	617-638 bp	1.0	78.9
clpP-psbB_p3	TGTCAACCCAAGATGGATGC	GCCGGGATCATTCAATACGA	50.0	50.0	58.2	57.8	618-639 bp	1.0	78.7
clpP-psbB_p4	ACCCAAGATGGATGCTTGTC	CGATACCAAGGCAAACCCAT	50.0	50.0	57.9	58.2	582-603 bp	1.0	78.4
clpP-psbB_p5	GTCAACCCAAGATGGATGCT	CGATACCAAGGCAAACCCAT	50.0	50.0	57.9	58.2	586-607 bp	1.0	78.4