Hotspot

trnT-UGU-trnL-UAA

LSC · 47339-47947 · 609 bp

Back to Gyrotaenia

Pi 0.0219
MarkerSeek score 69.90
Primer available yes
Label trnT-UGU-trnL-UAA

Feature Metadata

Pi Curve

Haplotype Network

Species Separation

Primer Ranking

Primer ID fwd_seq rev_seq fwd_gc rev_gc fwd_tm rev_tm amplicon_size cross_species_success_rate primer_score
trnT-UGU-trnL-UAA_p1 GCGATGCTCTAACCTCTGAG ACCAATTTCGCCATATCCCC 55.0 50.0 57.9 58.0 632-659 bp 1.0 84.4
trnT-UGU-trnL-UAA_p2 GAGTCGAACCGATGACCATC ACCAATTTCGCCATATCCCC 55.0 50.0 58.2 58.0 663-690 bp 1.0 84.1
trnT-UGU-trnL-UAA_p3 ACAGATGGAGAAAAGCCAGC ACCAATTTCGCCATATCCCC 50.0 50.0 58.2 58.0 688-715 bp 1.0 84.0
trnT-UGU-trnL-UAA_p4 GCGATGCTCTAACCTCTGAG TAGCGTCTACCAATTTCGCC 55.0 50.0 57.9 58.1 640-667 bp 1.0 83.9
trnT-UGU-trnL-UAA_p5 GAGTCGAACCGATGACCATC TAGCGTCTACCAATTTCGCC 55.0 50.0 58.2 58.1 671-698 bp 1.0 83.6