Hotspot

rps2

LSC · 17002-17712 · 711 bp

Back to Gymnotheca

Pi 0

MarkerSeek score 27.20

Primer available yes

Label rps2

Feature Metadata

label_name: rps2
feature_type: gene
region: LSC
length_bp: 711
variable_sites: 0
pi: 0
unique_haplotype_count: 1
primer_available: yes
alignment_reliability: 1.00
markerseek_score: 27.20

Pi Curve

Haplotype Network

Species Separation

Primer Ranking

Primer ID	fwd_seq	rev_seq	fwd_gc	rev_gc	fwd_tm	rev_tm	amplicon_size	cross_species_success_rate	primer_score
rps2_p1	CAATCTGCGTTTTGCTCAGG	CGGGGTCGTATTGATTGGTT	50.0	50.0	58.0	58.0	1651 bp	1.0	79.8
rps2_p2	CCAATCTGCGTTTTGCTCAG	CGGGGTCGTATTGATTGGTT	50.0	50.0	58.0	58.0	1652 bp	1.0	79.8
rps2_p3	CAATCTGCGTTTTGCTCAGG	TCTCCGGGAGAAAGTTCCTT	50.0	50.0	58.0	58.0	1269 bp	1.0	79.7
rps2_p4	CCAATCTGCGTTTTGCTCAG	TCTCCGGGAGAAAGTTCCTT	50.0	50.0	58.0	58.0	1270 bp	1.0	79.7
rps2_p5	CAATCTGCGTTTTGCTCAGG	CGCCCGAGTTTTAGCAAAAG	50.0	50.0	58.0	58.0	1679 bp	1.0	79.7