Hotspot

psbC

LSC · 37768-39189 · 1422 bp

Back to Gagnebina

Pi 0

MarkerSeek score 32.20

Primer available yes

Label psbC

Feature Metadata

label_name: psbC
feature_type: gene
region: LSC
length_bp: 1422
variable_sites: 0
pi: 0
unique_haplotype_count: 1
primer_available: yes
alignment_reliability: 1.00
markerseek_score: 32.20

Pi Curve

Haplotype Network

Species Separation

Primer Ranking

Primer ID	fwd_seq	rev_seq	fwd_gc	rev_gc	fwd_tm	rev_tm	amplicon_size	cross_species_success_rate	primer_score
psbC_p1	GTTTCTCAAGAAATCCGCGC	GCTCCACTCAACCCAACATC	50.0	55.0	58.1	58.8	1602 bp	1.0	72.4
psbC_p2	CGTTTCTCAAGAAATCCGCG	GCTCCACTCAACCCAACATC	50.0	55.0	57.9	58.8	1603 bp	1.0	72.2
psbC_p3	GTTTCTCAAGAAATCCGCGC	CTCCACTCAACCCAACATCT	50.0	50.0	58.1	57.1	1601 bp	1.0	72.1
psbC_p4	CGTTTCTCAAGAAATCCGCG	CTCCACTCAACCCAACATCT	50.0	50.0	57.9	57.1	1602 bp	1.0	71.9
psbC_p5	GCAGCGGAAGATCCTGAATT	GCTCCACTCAACCCAACATC	50.0	55.0	58.3	58.8	1584 bp	1.0	70.7