feature_id feature_type parent_gene label_name start end strand length_bp region pi variable_sites indel_sites conserved_left_bp conserved_right_bp primer_available species_resolution unique_haplotype_count species_specific_haplotype_ratio interspecific_divergence alignment_reliability markerseek_score trnH-GUG tRNA trnH-GUG trnH-GUG 4 78 -1 75 LSC 0.000000 0 75 300 120 no 0.333333 2 0.500000 NA 1.000000 34.000000 IGS_001 igs trnH-GUG|psbA trnH-GUG-psbA 79 400 0 322 LSC 0.040498 13 322 300 3 yes 1.000000 3 1.000000 NA 0.996894 61.400000 psbA gene psbA psbA 401 1459 -1 1059 LSC 0.014794 23 1007 56 41 no 1.000000 3 1.000000 0.282366 1.000000 56.200000 IGS_002 igs psbA|trnK-UUU psbA-trnK-UUU 1460 1710 0 251 LSC 0.015936 6 234 267 112 no 0.333333 2 0.500000 NA 1.000000 43.600000 trnK-UUU_part2 tRNA trnK-UUU trnK-UUU 1711 1745 -1 35 LSC 0.000000 0 35 194 77 no 0.333333 2 0.500000 NA 1.000000 30.800000 matK gene matK matK 1981 3513 -1 1533 LSC 0.007393 16 1485 151 300 no 1.000000 3 1.000000 0.194879 1.000000 59.600000 IGS_005 igs matK|trnK-UUU matK-trnK-UUU 3514 4217 0 704 LSC 0.018939 20 631 65 300 no 0.333333 2 0.500000 0.182648 1.000000 48.200000 trnK-UUU_part1 tRNA trnK-UUU trnK-UUU 4218 4254 -1 37 LSC 0.000000 0 37 18 282 no 0.333333 2 0.500000 NA 1.000000 26.400000 IGS_006 igs trnK-UUU|rps16 trnK-UUU-rps16 4255 5122 0 868 LSC 0.004224 5 857 55 148 no 1.000000 3 1.000000 NA 1.000000 50.500000 rps16 gene rps16 rps16 5123 6191 -1 1069 LSC 0.011537 18 1017 300 114 no 1.000000 3 1.000000 0.218261 1.000000 59.600000 IGS_007 igs rps16|trnQ-UUG rps16-trnQ-UUG 6192 7243 0 1052 LSC 0.025982 40 967 177 224 yes 1.000000 3 1.000000 0.298673 1.000000 73.500000 trnQ-UUG tRNA trnQ-UUG trnQ-UUG 7244 7315 -1 72 LSC 0.000000 0 64 26 152 no 0.333333 2 0.500000 NA 1.000000 27.000000 IGS_008 igs trnQ-UUG|psbK trnQ-UUG-psbK 7316 7661 0 346 LSC 0.017341 9 312 98 300 no 0.333333 2 0.500000 0.176471 1.000000 44.400000 psbK gene psbK psbK 7662 7841 1 180 LSC 0.000000 0 180 141 278 no 0.333333 2 0.500000 NA 1.000000 35.600000 IGS_009 igs psbK|psbI psbK-psbI 7842 8242 0 401 LSC 0.006650 4 385 300 183 no 0.333333 2 0.500000 NA 1.000000 45.100000 psbI gene psbI psbI 8243 8353 1 111 LSC 0.000000 0 111 112 72 no 0.333333 2 0.500000 NA 1.000000 30.400000 IGS_010 igs psbI|trnS-GCU psbI-trnS-GCU 8354 8415 0 62 LSC 0.000000 0 62 223 10 no 0.333333 2 0.500000 NA 1.000000 25.800000 trnS-GCU tRNA trnS-GCU trnS-GCU 8416 8503 -1 88 LSC 0.053030 7 60 285 161 yes 0.333333 2 0.500000 0.166667 1.000000 69.500000 IGS_011 igs trnS-GCU|trnG-UCC trnS-GCU-trnG-UCC 8504 9082 0 579 LSC 0.021877 19 513 53 84 no 0.333333 2 0.500000 0.191919 1.000000 48.700000 trnG-UCC_part1 tRNA trnG-UCC trnG-UCC 9083 9105 1 23 LSC 0.000000 0 23 280 61 no 0.333333 2 0.500000 NA 1.000000 29.600000 trnG-UCC_part2 tRNA trnG-UCC trnG-UCC 9769 9816 1 48 LSC 0.000000 0 48 195 220 no 0.333333 2 0.500000 NA 1.000000 39.600000 IGS_014 igs trnG-UCC|trnR-UCU trnG-UCC-trnR-UCU 9817 9995 0 179 LSC 0.000000 0 179 243 41 no 0.333333 2 0.500000 NA 1.000000 28.100000 trnR-UCU tRNA trnR-UCU trnR-UCU 9996 10067 1 72 LSC 0.055556 6 56 300 71 yes 0.333333 2 0.500000 NA 1.000000 63.200000 IGS_015 igs trnR-UCU|atpA trnR-UCU-atpA 10068 10185 0 118 LSC 0.067797 12 76 18 57 yes 0.333333 2 0.500000 0.190476 1.000000 61.300000 atpA gene atpA atpA 10186 11709 -1 1524 LSC 0.005906 13 1485 23 3 no 1.000000 3 1.000000 0.205347 1.000000 47.600000 IGS_016 igs atpA|atpF atpA-atpF 11710 11786 0 77 LSC 0.095238 11 43 300 101 yes 0.333333 2 0.500000 0.215686 1.000000 68.000000 atpF gene atpF atpF 11787 13028 -1 1242 LSC 0.026860 50 1092 46 10 yes 1.000000 3 1.000000 0.222222 0.999195 61.600000 IGS_017 igs atpF|atpH atpF-atpH 13029 13380 0 352 LSC 0.042614 22 296 34 219 yes 1.000000 3 1.000000 0.250947 1.000000 68.100000 atpH gene atpH atpH 13381 13626 -1 246 LSC 0.016260 6 225 13 16 no 0.333333 2 0.500000 0.190476 1.000000 36.300000 IGS_018 igs atpH|atpI atpH-atpI 13627 14581 0 955 LSC 0.033508 47 819 11 104 yes 1.000000 3 1.000000 0.221286 1.000000 65.800000 atpI gene atpI atpI 14582 15325 -1 744 LSC 0.012545 14 707 53 28 no 0.333333 2 0.500000 0.252252 1.000000 41.300000 IGS_019 igs atpI|rps2 atpI-rps2 15326 15551 0 226 LSC 0.016296 5 216 171 145 no 1.000000 3 1.000000 NA 0.995575 58.400000 rps2 gene rps2 rps2 15552 16262 -1 711 LSC 0.027192 29 620 63 89 yes 0.333333 2 0.500000 0.212454 1.000000 53.300000 IGS_020 igs rps2|rpoC2 rps2-rpoC2 16263 16488 0 226 LSC 0.050147 16 193 300 276 yes 1.000000 3 1.000000 0.285778 1.000000 83.800000 rpoC2 gene rpoC2 rpoC2 16489 20625 -1 4137 LSC 0.019579 119 3818 29 222 yes 1.000000 3 1.000000 0.238647 1.000000 53.400000 IGS_021 igs rpoC2|rpoC1 rpoC2-rpoC1 20626 20726 0 101 LSC 0.000000 0 101 191 121 no 0.333333 2 0.500000 NA 1.000000 34.100000 rpoC1 gene rpoC1 rpoC1 20727 23594 -1 2868 LSC 0.015458 66 2662 292 82 yes 1.000000 3 1.000000 0.213708 1.000000 56.900000 IGS_022 igs rpoC1|rpoB rpoC1-rpoB 23595 23620 0 26 LSC 0.000000 0 26 33 56 no 0.333333 2 0.500000 NA 1.000000 27.500000 rpoB gene rpoB rpoB 23621 26833 -1 3213 LSC 0.009337 45 3067 59 63 no 0.333333 2 0.500000 0.205479 1.000000 38.200000 IGS_023 igs rpoB|trnC-GCA rpoB-trnC-GCA 26834 27939 0 1106 LSC 0.016591 27 1040 187 13 no 1.000000 3 1.000000 0.262928 0.999096 55.200000 trnC-GCA tRNA trnC-GCA trnC-GCA 27940 28010 1 71 LSC 0.056338 6 10 21 300 yes 0.333333 2 0.500000 0.065574 1.000000 64.400000 IGS_024 igs trnC-GCA|petN trnC-GCA-petN 28011 28808 0 798 LSC 0.000000 0 0 51 300 no 0.000000 1 0.000000 0.000000 1.000000 28.800000 petN gene petN petN 28809 28898 1 90 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_025 igs petN|psbM petN-psbM 28899 29862 0 964 LSC 0.002781 4 5 300 300 no 1.000000 3 1.000000 0.002781 0.994813 61.000000 psbM gene psbM psbM 29863 29967 -1 105 LSC 0.000000 0 0 254 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_026 igs psbM|trnD-GUC psbM-trnD-GUC 29968 30500 0 533 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 38.600000 trnD-GUC tRNA trnD-GUC trnD-GUC 30501 30574 -1 74 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_027 igs trnD-GUC|trnY-GUA trnD-GUC-trnY-GUA 30575 30639 0 65 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 trnY-GUA tRNA trnY-GUA trnY-GUA 30640 30723 -1 84 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_028 igs trnY-GUA|trnE-UUC trnY-GUA-trnE-UUC 30724 30788 0 65 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 trnE-UUC tRNA trnE-UUC trnE-UUC 30789 30861 -1 73 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_029 igs trnE-UUC|trnT-GGU trnE-UUC-trnT-GGU 30862 31438 0 577 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 39.500000 trnT-GGU tRNA trnT-GGU trnT-GGU 31439 31510 1 72 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_030 igs trnT-GGU|psbD trnT-GGU-psbD 31511 32797 0 1287 LSC 0.001554 3 0 300 300 no 0.333333 2 0.500000 0.001554 1.000000 47.200000 psbD gene psbD psbD 32798 33859 1 1062 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 40.000000 psbC gene psbC psbC 33825 35228 1 1404 LSC 0.000475 1 0 300 209 no 0.333333 2 0.500000 0.000475 1.000000 46.600000 IGS_032 igs psbC|trnS-UGA psbC-trnS-UGA 35229 35456 0 228 LSC 0.002924 1 0 300 159 no 0.333333 2 0.500000 0.002924 1.000000 38.800000 trnS-UGA tRNA trnS-UGA trnS-UGA 35457 35549 -1 93 LSC 0.000000 0 0 18 66 no 0.000000 1 0.000000 0.000000 1.000000 20.100000 IGS_033 igs trnS-UGA|psbZ trnS-UGA-psbZ 35550 35853 0 304 LSC 0.002193 1 0 111 74 no 0.333333 2 0.500000 0.002193 1.000000 32.000000 psbZ gene psbZ psbZ 35854 36042 1 189 LSC 0.003527 1 0 237 300 no 0.333333 2 0.500000 0.003527 1.000000 42.200000 IGS_034 igs psbZ|trnG-GCC psbZ-trnG-GCC 36043 36255 0 213 LSC 0.000000 0 0 114 98 no 0.000000 1 0.000000 0.000000 1.000000 26.100000 trnG-GCC tRNA trnG-GCC trnG-GCC 36256 36326 1 71 LSC 0.000000 0 0 300 27 no 0.000000 1 0.000000 0.000000 1.000000 20.800000 IGS_035 igs trnG-GCC|trnfM-CAU trnG-GCC-trnfM-CAU 36327 36500 0 174 LSC 0.003831 1 0 300 300 no 0.333333 2 0.500000 0.003831 1.000000 42.400000 trnfM-CAU tRNA trnfM-CAU trnfM-CAU 36501 36574 -1 74 LSC 0.000000 0 0 146 300 no 0.000000 1 0.000000 0.000000 1.000000 29.700000 IGS_036 igs trnfM-CAU|rps14 trnfM-CAU-rps14 36575 36718 0 144 LSC 0.000000 0 0 220 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rps14 gene rps14 rps14 36719 37021 -1 303 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_037 igs rps14|psaB rps14-psaB 37022 37137 0 116 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 psaB gene psaB psaB 37138 39342 -1 2205 LSC 0.000302 1 0 300 300 no 0.333333 2 0.500000 0.000302 1.000000 45.000000 IGS_038 igs psaB|psaA psaB-psaA 39343 39367 0 25 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 psaA gene psaA psaA 39368 41620 -1 2253 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 38.400000 IGS_039 igs psaA|pafI psaA-pafI 41621 42305 0 685 LSC 0.000973 1 0 300 300 no 0.333333 2 0.500000 0.000973 1.000000 46.900000 pafI gene pafI pafI 42306 44224 -1 1919 LSC 0.000695 2 0 206 97 no 1.000000 3 1.000000 0.000695 1.000000 50.600000 IGS_040 igs pafI|trnS-GGA pafI-trnS-GGA 44225 45101 0 877 LSC 0.000760 1 0 5 300 no 0.333333 2 0.500000 0.000760 1.000000 32.100000 trnS-GGA tRNA trnS-GGA trnS-GGA 45102 45189 1 88 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_041 igs trnS-GGA|rps4 trnS-GGA-rps4 45190 45436 0 247 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rps4 gene rps4 rps4 45437 46042 -1 606 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 40.000000 IGS_042 igs rps4|trnT-UGU rps4-trnT-UGU 46043 46379 0 337 LSC 0.000000 0 10 300 300 no 0.333333 2 0.500000 0.000000 0.970326 43.500000 trnT-UGU tRNA trnT-UGU trnT-UGU 46380 46452 -1 73 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_043 igs trnT-UGU|trnL-UAA trnT-UGU-trnL-UAA 46453 47207 0 755 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 40.000000 trnL-UAA_part1 tRNA trnL-UAA trnL-UAA 47208 47242 1 35 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 trnL-UAA_part2 tRNA trnL-UAA trnL-UAA 47703 47752 1 50 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_046 igs trnL-UAA|trnF-GAA trnL-UAA-trnF-GAA 47753 48091 0 339 LSC 0.000000 0 0 300 240 no 0.000000 1 0.000000 0.000000 1.000000 34.600000 trnF-GAA tRNA trnF-GAA trnF-GAA 48092 48164 1 73 LSC 0.000000 0 0 300 167 no 0.000000 1 0.000000 0.000000 1.000000 31.300000 IGS_047 igs trnF-GAA|ndhJ trnF-GAA-ndhJ 48165 48842 0 678 LSC 0.002950 3 0 300 300 no 1.000000 3 1.000000 0.002950 1.000000 60.600000 ndhJ gene ndhJ ndhJ 48843 49028 -1 186 LSC 0.000000 0 0 237 287 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_048 igs ndhJ|ndhC ndhJ-ndhC 49029 49962 0 934 LSC 0.002144 3 1 300 300 no 1.000000 3 1.000000 0.002144 0.998929 60.200000 ndhC gene ndhC ndhC 49963 50079 -1 117 LSC 0.000000 0 0 165 300 no 0.000000 1 0.000000 0.000000 1.000000 31.100000 IGS_049 igs ndhC|trnV-UAC ndhC-trnV-UAC 50080 50977 0 898 LSC 0.001485 2 2 282 300 no 1.000000 3 1.000000 0.001486 1.000000 60.000000 trnV-UAC_part2 tRNA trnV-UAC trnV-UAC 50978 51012 -1 35 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 trnV-UAC_part1 tRNA trnV-UAC trnV-UAC 51596 51633 -1 38 LSC 0.000000 0 0 238 96 no 0.000000 1 0.000000 0.000000 1.000000 25.900000 IGS_052 igs trnV-UAC|trnM-CAU trnV-UAC-trnM-CAU 51634 51819 0 186 LSC 0.003584 1 0 276 300 no 0.333333 2 0.500000 0.003584 1.000000 42.300000 trnM-CAU tRNA trnM-CAU trnM-CAU 51820 51892 1 73 LSC 0.000000 0 0 89 300 no 0.000000 1 0.000000 0.000000 1.000000 25.400000 IGS_053 igs trnM-CAU|atpE trnM-CAU-atpE 51893 52103 0 211 LSC 0.000000 0 0 162 300 no 0.000000 1 0.000000 0.000000 1.000000 30.900000 atpE gene atpE atpE 52104 52505 -1 402 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 35.900000 atpB gene atpB atpB 52502 53998 -1 1497 LSC 0.001781 4 0 300 300 no 1.000000 3 1.000000 0.001781 1.000000 59.900000 IGS_055 igs atpB|rbcL atpB-rbcL 53999 54774 0 776 LSC 0.000000 0 0 55 300 no 0.000000 1 0.000000 0.000000 1.000000 29.100000 rbcL gene rbcL rbcL 54775 56226 1 1452 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 40.000000 IGS_056 igs rbcL|accD rbcL-accD 56227 56926 0 700 LSC 0.000952 1 0 300 300 no 0.333333 2 0.500000 0.000952 1.000000 46.900000 accD gene accD accD 56927 58399 1 1473 LSC 0.001358 3 0 163 159 no 0.333333 2 0.500000 0.001358 1.000000 44.000000 IGS_057 igs accD|psaI accD-psaI 58400 59057 0 658 LSC 0.004090 4 7 14 300 no 1.000000 3 1.000000 0.004094 0.990881 48.400000 psaI gene psaI psaI 59058 59168 1 111 LSC 0.000000 0 0 7 300 no 0.000000 1 0.000000 0.000000 1.000000 19.300000 IGS_058 igs psaI|pafII psaI-pafII 59169 59589 0 421 LSC 0.000000 0 1 118 300 no 0.333333 2 0.500000 0.000000 0.997625 36.600000 pafII gene pafII pafII 59590 60144 1 555 LSC 0.000000 0 0 300 67 no 0.000000 1 0.000000 0.000000 1.000000 29.100000 IGS_059 igs pafII|cemA pafII-cemA 60145 60931 0 787 LSC 0.000847 1 0 300 93 no 0.333333 2 0.500000 0.000847 1.000000 38.800000 cemA gene cemA cemA 60932 61618 1 687 LSC 0.002911 3 0 300 3 no 1.000000 3 1.000000 0.002911 1.000000 45.800000 IGS_060 igs cemA|petA cemA-petA 61619 61847 0 229 LSC 0.002911 1 0 300 300 no 0.333333 2 0.500000 0.002911 1.000000 41.900000 petA gene petA petA 61848 62810 1 963 LSC 0.000000 0 0 225 300 no 0.000000 1 0.000000 0.000000 1.000000 40.000000 IGS_061 igs petA|psbJ petA-psbJ 62811 63738 0 928 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 40.000000 psbJ gene psbJ psbJ 63739 63861 -1 123 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_062 igs psbJ|psbL psbJ-psbL 63862 63992 0 131 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 psbL gene psbL psbL 63993 64109 -1 117 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_063 igs psbL|psbF psbL-psbF 64110 64132 0 23 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 psbF gene psbF psbF 64133 64252 -1 120 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_064 igs psbF|psbE psbF-psbE 64253 64266 0 14 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 psbE gene psbE psbE 64267 64518 -1 252 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_065 igs psbE|petL psbE-petL 64519 65446 0 928 LSC 0.001437 2 1 300 300 no 1.000000 3 1.000000 0.001438 1.000000 59.800000 petL gene petL petL 65447 65542 1 96 LSC 0.000000 0 0 149 300 no 0.000000 1 0.000000 0.000000 1.000000 29.900000 IGS_066 igs petL|petG petL-petG 65543 65727 0 185 LSC 0.000000 0 0 245 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 petG gene petG petG 65728 65841 1 114 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_067 igs petG|trnW-CCA petG-trnW-CCA 65842 65955 0 114 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 trnW-CCA tRNA trnW-CCA trnW-CCA 65956 66029 -1 74 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_068 igs trnW-CCA|trnP-UGG trnW-CCA-trnP-UGG 66030 66185 0 156 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 trnP-UGG tRNA trnP-UGG trnP-UGG 66186 66259 -1 74 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_069 igs trnP-UGG|psaJ trnP-UGG-psaJ 66260 66622 0 363 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 35.100000 psaJ gene psaJ psaJ 66623 66757 1 135 LSC 0.000000 0 0 300 195 no 0.000000 1 0.000000 0.000000 1.000000 33.400000 IGS_070 igs psaJ|rpl33 psaJ-rpl33 66758 67217 0 460 LSC 0.002899 2 0 300 300 no 0.333333 2 0.500000 0.002899 1.000000 45.200000 rpl33 gene rpl33 rpl33 67218 67418 1 201 LSC 0.000000 0 0 57 300 no 0.000000 1 0.000000 0.000000 1.000000 23.000000 IGS_071 igs rpl33|rps18 rpl33-rps18 67419 67575 0 157 LSC 0.000000 0 0 258 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rps18 gene rps18 rps18 67576 67881 1 306 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.900000 IGS_072 igs rps18|rpl20 rps18-rpl20 67882 68111 0 230 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rpl20 gene rpl20 rpl20 68112 68498 -1 387 LSC 0.000000 0 0 300 194 no 0.000000 1 0.000000 0.000000 1.000000 35.100000 IGS_073 igs rpl20|rps12 rpl20-rps12 68499 69306 0 808 LSC 0.000825 1 1 300 300 no 1.000000 3 1.000000 0.000826 1.000000 59.400000 rps12_part1 gene rps12 rps12 69307 69420 -1 114 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_074 igs rps12|clpP1 rps12-clpP1 69421 69571 0 151 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 clpP1 gene clpP1 clpP1 69572 71517 -1 1946 LSC 0.001713 5 6 300 300 no 1.000000 3 1.000000 0.001716 1.000000 59.300000 IGS_075 igs clpP1|psbB clpP1-psbB 71518 71952 0 435 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 36.600000 psbB gene psbB psbB 71953 73479 1 1527 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 39.900000 IGS_076 igs psbB|psbT psbB-psbT 73480 73669 0 190 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 psbT gene psbT psbT 73670 73777 1 108 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_077 igs psbT|pbf1 psbT-pbf1 73778 73838 0 61 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 pbf1 gene pbf1 pbf1 73839 73970 -1 132 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_078 igs pbf1|psbH pbf1-psbH 73971 74076 0 106 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 psbH gene psbH psbH 74077 74298 1 222 LSC 0.000000 0 0 300 162 no 0.000000 1 0.000000 0.000000 1.000000 30.900000 IGS_079 igs psbH|petB psbH-petB 74299 74423 0 125 LSC 0.000000 0 0 300 37 no 0.000000 1 0.000000 0.000000 1.000000 21.500000 petB gene petB petB 74424 75798 1 1375 LSC 0.000970 2 0 300 300 no 1.000000 3 1.000000 0.000970 1.000000 59.400000 IGS_080 igs petB|petD petB-petD 75799 76003 0 205 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 petD gene petD petD 76004 77252 1 1249 LSC 0.000534 1 0 300 300 no 0.333333 2 0.500000 0.000534 1.000000 46.600000 IGS_081 igs petD|rpoA petD-rpoA 77253 77423 0 171 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rpoA gene rpoA rpoA 77424 78437 -1 1014 LSC 0.001315 2 1 300 300 no 1.000000 3 1.000000 0.001316 1.000000 59.700000 IGS_082 igs rpoA|rps11 rpoA-rps11 78438 78508 0 71 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rps11 gene rps11 rps11 78509 78925 -1 417 LSC 0.000000 0 0 300 225 no 0.000000 1 0.000000 0.000000 1.000000 36.200000 IGS_083 igs rps11|rpl36 rps11-rpl36 78926 79029 0 104 LSC 0.000000 0 0 300 121 no 0.000000 1 0.000000 0.000000 1.000000 27.800000 rpl36 gene rpl36 rpl36 79030 79143 -1 114 LSC 0.000000 0 0 300 7 no 0.000000 1 0.000000 0.000000 1.000000 19.300000 IGS_084 igs rpl36|infA rpl36-infA 79144 79240 0 97 LSC 0.006873 1 0 300 300 no 0.333333 2 0.500000 0.006873 1.000000 44.400000 infA gene infA infA 79241 79474 -1 234 LSC 0.000000 0 0 89 208 no 0.000000 1 0.000000 0.000000 1.000000 25.400000 IGS_085 igs infA|rps8 infA-rps8 79475 79589 0 115 LSC 0.000000 0 0 300 93 no 0.000000 1 0.000000 0.000000 1.000000 25.700000 rps8 gene rps8 rps8 79590 80000 -1 411 LSC 0.001622 1 0 300 300 no 0.333333 2 0.500000 0.001622 1.000000 43.300000 IGS_086 igs rps8|rpl14 rps8-rpl14 80001 80164 0 164 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rpl14 gene rpl14 rpl14 80165 80533 -1 369 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 35.200000 IGS_087 igs rpl14|rpl16 rpl14-rpl16 80534 80650 0 117 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rpl16 gene rpl16 rpl16 80651 81923 -1 1273 LSC 0.000524 1 1 300 300 no 1.000000 3 1.000000 0.000524 0.999214 59.200000 IGS_088 igs rpl16|rps3 rpl16-rps3 81924 82061 0 138 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rps3 gene rps3 rps3 82062 82724 -1 663 LSC 0.001006 1 0 300 300 no 0.333333 2 0.500000 0.001006 1.000000 46.900000 rpl22 gene rpl22 rpl22 82709 83173 -1 465 LSC 0.000000 0 0 67 300 no 0.000000 1 0.000000 0.000000 1.000000 27.200000 IGS_090 igs rpl22|rps19 rpl22-rps19 83174 83243 0 70 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rps19 gene rps19 rps19 83244 83393 -1 150 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_091 igs rps19|rpl2 rps19-rpl2 83394 83585 0 192 IRb 0.000000 0 68 300 300 no 0.333333 2 0.500000 0.000000 1.000000 42.600000 rpl2 gene rpl2 rpl2 83586 85082 -1 1497 IRb 0.000000 0 1497 300 300 no 0.333333 2 0.500000 NA 1.000000 46.200000 IGS_092 igs rpl2|rpl23 rpl2-rpl23 85083 85101 0 19 IRb 0.000000 0 19 300 300 no 0.333333 2 0.500000 NA 1.000000 40.000000 rpl23 gene rpl23 rpl23 85102 85383 -1 282 IRb 0.000000 0 282 300 300 no 0.333333 2 0.500000 NA 1.000000 40.000000 IGS_093 igs rpl23|trnI-CAU rpl23-trnI-CAU 85384 85548 0 165 IRb 0.000000 0 165 300 300 no 0.333333 2 0.500000 NA 1.000000 40.000000 trnI-CAU tRNA trnI-CAU trnI-CAU 85549 85622 -1 74 IRb 0.000000 0 74 300 300 no 0.333333 2 0.500000 NA 1.000000 40.000000 IGS_094 igs trnI-CAU|ycf2 trnI-CAU-ycf2 85623 85710 0 88 IRb 0.000000 0 88 300 300 no 0.333333 2 0.500000 NA 1.000000 40.000000 ycf2 gene ycf2 ycf2 85711 92523 1 6813 IRb 0.000000 0 6813 300 300 no 0.333333 2 0.500000 NA 1.000000 40.000000 IGS_095 igs ycf2|trnL-CAA ycf2-trnL-CAA 92524 93141 0 618 IRb 0.000000 0 618 300 300 no 0.333333 2 0.500000 NA 1.000000 46.200000 trnL-CAA tRNA trnL-CAA trnL-CAA 93142 93222 -1 81 IRb 0.000000 0 81 300 300 no 0.333333 2 0.500000 NA 1.000000 40.000000 IGS_096 igs trnL-CAA|trnV-GAC trnL-CAA-trnV-GAC 93223 99115 0 5893 IRb 0.000000 0 5893 300 300 no 0.333333 2 0.500000 NA 1.000000 40.000000 trnV-GAC tRNA trnV-GAC trnV-GAC 99116 99187 1 72 IRb 0.000000 0 72 300 300 no 0.333333 2 0.500000 NA 1.000000 40.000000 IGS_097 igs trnV-GAC|rrn16 trnV-GAC-rrn16 99188 99420 0 233 IRb 0.000000 0 233 300 300 no 0.333333 2 0.500000 NA 1.000000 40.000000 rrn16 rRNA rrn16 rrn16 99421 100911 1 1491 IRb 0.000000 0 1491 300 300 no 0.333333 2 0.500000 NA 1.000000 46.200000 IGS_098 igs rrn16|trnI-GAU rrn16-trnI-GAU 100912 101217 0 306 IRb 0.000000 0 306 300 300 no 0.333333 2 0.500000 NA 1.000000 40.100000 trnI-GAU_part1 tRNA trnI-GAU trnI-GAU 101218 101254 1 37 IRb 0.000000 0 37 300 300 no 0.333333 2 0.500000 NA 1.000000 40.000000 trnI-GAU_part2 tRNA trnI-GAU trnI-GAU 102201 102235 1 35 IRb 0.000000 0 35 300 300 no 0.333333 2 0.500000 NA 1.000000 40.000000 IGS_101 igs trnI-GAU|trnA-UGC trnI-GAU-trnA-UGC 102236 102299 0 64 IRb 0.000000 0 64 300 300 no 0.333333 2 0.500000 NA 1.000000 40.000000 trnA-UGC_part1 tRNA trnA-UGC trnA-UGC 102300 102337 1 38 IRb 0.000000 0 38 300 300 no 0.333333 2 0.500000 NA 1.000000 40.000000 trnA-UGC_part2 tRNA trnA-UGC trnA-UGC 103142 103176 1 35 IRb 0.000000 0 35 300 300 no 0.333333 2 0.500000 NA 1.000000 40.000000 IGS_104 igs trnA-UGC|rrn23 trnA-UGC-rrn23 103177 103342 0 166 IRb 0.000000 0 166 300 300 no 0.333333 2 0.500000 NA 1.000000 40.000000 rrn23 rRNA rrn23 rrn23 103343 106154 1 2812 IRb 0.000000 0 2812 300 300 no 0.333333 2 0.500000 NA 1.000000 43.500000 IGS_105 igs rrn23|rrn4.5 rrn23-rrn4.5 106155 106252 0 98 IRb 0.000000 0 98 300 300 no 0.333333 2 0.500000 NA 1.000000 40.000000 rrn4.5 rRNA rrn4.5 rrn4.5 106253 106355 1 103 IRb 0.000000 0 103 300 300 no 0.333333 2 0.500000 NA 1.000000 40.000000 IGS_106 igs rrn4.5|rrn5 rrn4.5-rrn5 106356 106622 0 267 IRb 0.000000 0 267 300 300 no 0.333333 2 0.500000 NA 1.000000 40.000000 rrn5 rRNA rrn5 rrn5 106623 106743 1 121 IRb 0.000000 0 121 300 300 no 0.333333 2 0.500000 NA 1.000000 40.000000 IGS_107 igs rrn5|trnR-ACG rrn5-trnR-ACG 106744 106994 0 251 IRb 0.000000 0 251 300 300 no 1.000000 3 1.000000 NA 0.996016 52.500000 trnR-ACG tRNA trnR-ACG trnR-ACG 106995 107068 1 74 IRb 0.000000 0 74 300 300 no 0.333333 2 0.500000 NA 1.000000 40.000000 IGS_108 igs trnR-ACG|trnN-GUU trnR-ACG-trnN-GUU 107069 107643 0 575 IRb 0.000000 0 575 300 300 no 0.333333 2 0.500000 NA 1.000000 45.700000 trnN-GUU tRNA trnN-GUU trnN-GUU 107644 107715 -1 72 IRb 0.000000 0 72 300 300 no 0.333333 2 0.500000 NA 1.000000 40.000000 IGS_109 igs trnN-GUU|ycf1 trnN-GUU-ycf1 107716 108040 0 325 IRb 0.000000 0 325 300 300 no 0.333333 2 0.500000 NA 1.000000 40.500000 ycf1 gene ycf1 ycf1 108041 113410 1 5370 SSC 0.001490 8 5370 300 300 no 1.000000 3 1.000000 NA 1.000000 53.400000 IGS_110 igs ycf1|rps15 ycf1-rps15 113411 113818 0 408 SSC 0.000000 0 408 300 60 no 0.333333 2 0.500000 NA 1.000000 31.800000 rps15 gene rps15 rps15 113819 114091 1 273 SSC 0.003663 1 273 300 300 no 1.000000 3 1.000000 NA 1.000000 54.600000 IGS_111 igs rps15|ccsA rps15-ccsA 114092 117313 0 3222 SSC 0.003110 10 3222 212 300 no 1.000000 3 1.000000 NA 0.997827 57.000000 ccsA gene ccsA ccsA 117314 118273 -1 960 SSC 0.003125 3 960 204 300 no 1.000000 3 1.000000 NA 1.000000 60.500000 IGS_112 igs ccsA|trnL-UAG ccsA-trnL-UAG 118274 118385 0 112 SSC 0.000000 0 112 300 284 no 1.000000 3 1.000000 NA 0.991071 52.400000 trnL-UAG tRNA trnL-UAG trnL-UAG 118386 118465 -1 80 SSC 0.000000 0 80 300 204 no 0.333333 2 0.500000 NA 1.000000 40.000000 IGS_113 igs trnL-UAG|trnN-GUU trnL-UAG-trnN-GUU 118466 120528 0 2063 SSC 0.000970 2 2063 300 300 no 1.000000 3 1.000000 NA 0.999031 58.100000 trnN-GUU tRNA trnN-GUU trnN-GUU 120529 120600 1 72 IRa 0.000000 0 72 300 300 no 0.333333 2 0.500000 NA 1.000000 40.000000 IGS_114 igs trnN-GUU|trnR-ACG trnN-GUU-trnR-ACG 120601 121175 0 575 IRa 0.000000 0 575 300 300 no 0.333333 2 0.500000 NA 1.000000 45.700000 trnR-ACG tRNA trnR-ACG trnR-ACG 121176 121249 -1 74 IRa 0.000000 0 74 300 300 no 0.333333 2 0.500000 NA 1.000000 40.000000 IGS_115 igs trnR-ACG|rrn5 trnR-ACG-rrn5 121250 121500 0 251 IRa 0.000000 0 23 300 300 no 1.000000 3 1.000000 0.000000 0.996016 57.700000 rrn5 rRNA rrn5 rrn5 121501 121621 -1 121 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_116 igs rrn5|rrn4.5 rrn5-rrn4.5 121622 121888 0 267 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rrn4.5 rRNA rrn4.5 rrn4.5 121889 121991 -1 103 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_117 igs rrn4.5|rrn23 rrn4.5-rrn23 121992 122089 0 98 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rrn23 rRNA rrn23 rrn23 122090 124901 -1 2812 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 37.300000 IGS_118 igs rrn23|trnA-UGC rrn23-trnA-UGC 124902 125067 0 166 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 trnA-UGC_part2 tRNA trnA-UGC trnA-UGC 125068 125102 -1 35 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 trnA-UGC_part1 tRNA trnA-UGC trnA-UGC 125907 125944 -1 38 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_121 igs trnA-UGC|trnI-GAU trnA-UGC-trnI-GAU 125945 126008 0 64 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 trnI-GAU_part2 tRNA trnI-GAU trnI-GAU 126009 126043 -1 35 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 trnI-GAU_part1 tRNA trnI-GAU trnI-GAU 126990 127026 -1 37 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_124 igs trnI-GAU|rrn16 trnI-GAU-rrn16 127027 127332 0 306 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.900000 rrn16 rRNA rrn16 rrn16 127333 128823 -1 1491 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 40.000000 IGS_125 igs rrn16|trnV-GAC rrn16-trnV-GAC 128824 129056 0 233 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 trnV-GAC tRNA trnV-GAC trnV-GAC 129057 129128 -1 72 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_126 igs trnV-GAC|rps12 trnV-GAC-rps12 129129 130663 0 1535 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 39.900000 rps12_part2 gene rps12 rps12 130664 131459 1 796 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 40.000000 IGS_127 igs rps12|rps7 rps12-rps7 131460 131513 0 54 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rps7 gene rps7 rps7 131514 131981 1 468 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 37.300000 IGS_128 igs rps7|trnL-CAA rps7-trnL-CAA 131982 135021 0 3040 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 36.800000 trnL-CAA tRNA trnL-CAA trnL-CAA 135022 135102 1 81 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_129 igs trnL-CAA|ycf2 trnL-CAA-ycf2 135103 135720 0 618 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 40.000000 ycf2 gene ycf2 ycf2 135721 142533 -1 6813 IRa 0.000098 1 0 300 300 no 0.333333 2 0.500000 0.000098 1.000000 40.100000 IGS_130 igs ycf2|trnI-CAU ycf2-trnI-CAU 142534 142621 0 88 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 trnI-CAU tRNA trnI-CAU trnI-CAU 142622 142695 1 74 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_131 igs trnI-CAU|rpl23 trnI-CAU-rpl23 142696 142860 0 165 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rpl23 gene rpl23 rpl23 142861 143142 1 282 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_132 igs rpl23|rpl2 rpl23-rpl2 143143 143161 0 19 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rpl2 gene rpl2 rpl2 143162 144658 1 1497 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 40.000000 IGS_133 igs rpl2|trnH-GUG rpl2-trnH-GUG 144659 3 0 156 IRa 0.000000 0 3 300 195 no 0.333333 2 0.500000 0.000000 1.000000 41.800000