primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnK-UUU-rps16_p1 trnK-UUU-rps16 1 TGTTCCGCACCAAGAATTCA ATGGGAGATAGGCAAATGCG 20 20 45.0 50.0 58.0 58.1 8.4 0.0 0.124144 4565 6532 2430-2917 0.492754 70.7 trnK-UUU-rps16_p2 trnK-UUU-rps16 2 CCTTTCAGGATCAGTCGTGG ATGGGAGATAGGCAAATGCG 20 20 55.0 50.0 58.0 58.1 0.0 0.0 0.114145 4565 6532 2328-2815 0.463768 69.6 trnK-UUU-rps16_p3 trnK-UUU-rps16 3 CCTTTCAGGATCAGTCGTGG TTGGGACTCGAACAAATGGG 20 20 55.0 50.0 58.0 58.1 0.0 0.0 0.111449 4565 6532 2345-2715 0.086957 54.6 trnK-UUU-rps16_p4 trnK-UUU-rps16 4 TGTTCCGCACCAAGAATTCA TTGGGACTCGAACAAATGGG 20 20 45.0 50.0 58.0 58.1 8.4 0.0 0.121448 4565 6532 2462-2634 0.072464 51.8 trnK-UUU-rps16_p5 trnK-UUU-rps16 5 AAACTCATCAGCGGATTCCC TTGGGACTCGAACAAATGGG 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.139836 4565 6532 2880-2987 0.057971 45.9 trnS-GCU-trnG-UCC_p1 trnS-GCU-trnG-UCC 1 CAATCCGACGCTTTAGTCCA ACGAGTCACACTTTTACCACT 20 21 50.0 42.9 58.0 57.2 0.0 0.0 1.818587 9401 9973 543-731 1.000000 77.5 trnS-GCU-trnG-UCC_p2 trnS-GCU-trnG-UCC 2 AATCCGACGCTTTAGTCCAC ACGAGTCACACTTTTACCACT 20 21 50.0 42.9 58.0 57.2 0.0 0.0 1.819975 9401 9973 542-730 1.000000 77.4 trnS-GCU-trnG-UCC_p3 trnS-GCU-trnG-UCC 3 CAATCCGACGCTTTAGTCCA AACGAGTCACACTTTTACCACT 20 22 50.0 40.9 58.0 57.9 0.0 0.0 2.137596 9401 9973 544-732 1.000000 74.9 trnS-GCU-trnG-UCC_p4 trnS-GCU-trnG-UCC 4 AATCCGACGCTTTAGTCCAC AACGAGTCACACTTTTACCACT 20 22 50.0 40.9 58.0 57.9 0.0 0.0 2.138984 9401 9973 543-731 1.000000 74.9 trnS-GCU-trnG-UCC_p5 trnS-GCU-trnG-UCC 5 AGCAATCCGACGCTTTAGTC ACGAGTCACACTTTTACCACT 20 21 50.0 42.9 58.4 57.2 0.0 0.0 2.172428 9401 9973 545-733 1.000000 74.6 trnG-UCC-trnR-UCU_p1 trnG-UCC-trnR-UCU 1 AGCCTTCCAAGCTAACGATG TGGAGAAAAATTGCGTCCAA 20 20 50.0 40.0 58.0 56.2 0.0 0.0 1.876361 10745 11620 666-1228 0.985507 76.4 trnG-UCC-trnR-UCU_p2 trnG-UCC-trnR-UCU 2 CCTAGCCTTCCAAGCTAACG TGGAGAAAAATTGCGTCCAA 20 20 55.0 40.0 58.1 56.2 0.0 0.0 1.905197 10745 11620 669-1231 0.985507 76.2 trnG-UCC-trnR-UCU_p3 trnG-UCC-trnR-UCU 3 AGCCTTCCAAGCTAACGATG AGAAGACCTCTGTCCTATCCA 20 21 50.0 47.6 58.0 56.9 0.0 0.0 2.081443 10745 11620 619-1181 1.000000 75.3 trnG-UCC-trnR-UCU_p4 trnG-UCC-trnR-UCU 4 CCTAGCCTTCCAAGCTAACG AGAAGACCTCTGTCCTATCCA 20 21 55.0 47.6 58.1 56.9 0.0 0.0 2.110280 10745 11620 622-1184 1.000000 75.1 trnG-UCC-trnR-UCU_p5 trnG-UCC-trnR-UCU 5 AGCCTTCCAAGCTAACGATG ATGGAGAAAAATTGCGTCCA 20 20 50.0 40.0 58.0 55.9 0.0 0.0 2.108559 10745 11620 667-1229 0.985507 74.6 atpH-atpI_p1 atpH-atpI 1 CAGTGACCCAGGAAAACGAA GGGTGCACTTTTACCTTGGA 20 20 50.0 50.0 58.0 58.0 0.0 18.0 0.048500 15426 16475 1844-2176 0.971014 90.5 atpH-atpI_p2 atpH-atpI 2 CCTCAAATCAGTCCTTCCCG GGGTGCACTTTTACCTTGGA 20 20 55.0 50.0 58.0 58.0 0.0 18.0 0.040132 15426 16475 1502-1841 0.898551 87.6 atpH-atpI_p3 atpH-atpI 3 TGGACTAAGAAGGGGGAAGG GGGTGCACTTTTACCTTGGA 20 20 55.0 50.0 58.0 58.0 0.0 18.0 0.043449 15426 16475 1553-1892 0.898551 87.6 atpH-atpI_p4 atpH-atpI 4 ATAACGGAAGCGGCAGAAAT GGGTGCACTTTTACCTTGGA 20 20 45.0 50.0 58.0 58.0 1.4 18.0 0.048681 15426 16475 1156-1494 0.855072 85.8 atpH-atpI_p5 atpH-atpI 5 CCCGCAGTAGGTTATTGTCC GGGTGCACTTTTACCTTGGA 20 20 55.0 50.0 58.1 58.0 0.0 18.0 0.060828 15426 16475 1486-1823 0.086957 52.2 rpoB-trnC-GCA_p1 rpoB-trnC-GCA 1 TGATCCAACTCTGAGCGGTA GCGTCTTTTGTTGATGAGGC 20 20 50.0 50.0 58.2 58.0 4.2 0.0 0.183568 28807 29985 1417-1928 0.855072 84.7 rpoB-trnC-GCA_p2 rpoB-trnC-GCA 2 CCTCATTTCCATCCTCGAGC GCGTCTTTTGTTGATGAGGC 20 20 55.0 50.0 58.1 58.0 7.0 0.0 0.154575 28807 29985 1246-1504 0.347826 64.7 rpoB-trnC-GCA_p3 rpoB-trnC-GCA 3 TCCCTCATTTCCATCCTCGA GCGTCTTTTGTTGATGAGGC 20 20 50.0 50.0 57.8 58.0 0.0 0.0 0.205582 28807 29985 1248-1506 0.347826 64.3 rpoB-trnC-GCA_p4 rpoB-trnC-GCA 4 TTCTGTTTCCTACTCACGCG GCGTCTTTTGTTGATGAGGC 20 20 50.0 50.0 57.9 58.0 3.5 0.0 0.091222 28807 29985 1754-1987 0.246377 61.1 rpoB-trnC-GCA_p5 rpoB-trnC-GCA 5 TTCTGTTTCCTACTCACGCG CCGGATTTGAACTGGGGAAA 20 20 50.0 50.0 57.9 58.1 3.5 0.0 0.142454 28807 29985 1729-1962 0.246377 60.7 petN-psbM_p1 petN-psbM 1 TTTCCCCAGTTCAAATCCGG ATCCCGAGTTTTTGCGAAGT 20 20 50.0 45.0 58.1 58.1 0.0 0.0 0.189918 30439 31719 1404-1940 0.985507 89.9 petN-psbM_p2 petN-psbM 2 TAGTAAGTCTCGCTTGGGCT ATCCCGAGTTTTTGCGAAGT 20 20 50.0 45.0 58.2 58.1 0.0 0.0 0.259139 30439 31719 1023-1536 0.985507 89.3 petN-psbM_p3 petN-psbM 3 GCCTCATCAACAAAAGACGC ATCCCGAGTTTTTGCGAAGT 20 20 50.0 45.0 58.0 58.1 0.0 0.0 0.138687 30439 31719 1379-1915 0.782609 82.2 petN-psbM_p4 petN-psbM 4 GCCTCATCAACAAAAGACGC TGTAAGTGGGGGAGAAAGGT 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.158548 30439 31719 2142-2142 0.014493 39.3 petN-psbM_p5 petN-psbM 5 TTTCCCCAGTTCAAATCCGG TGTAAGTGGGGGAGAAAGGT 20 20 50.0 50.0 58.1 57.9 0.0 0.0 0.209779 30439 31719 2167-2167 0.014493 38.9 trnT-GGU-psbD_p1 trnT-GGU-psbD 1 GTGGTAGAGTAACGCCATGG ACAAAAACGAAACGGTCCCT 20 20 55.0 45.0 58.1 58.2 7.6 0.0 0.310137 33929 35724 1702-2241 0.985507 88.9 trnT-GGU-psbD_p2 trnT-GGU-psbD 2 TCAGTGGTAGAGTAACGCCA ACAAAAACGAAACGGTCCCT 20 20 50.0 45.0 58.1 58.2 0.0 0.0 0.332292 33929 35724 1705-2244 0.985507 88.8 trnT-GGU-psbD_p3 trnT-GGU-psbD 3 GAGCCCCTTTAACTCAGTGG ACAAAAACGAAACGGTCCCT 20 20 55.0 45.0 57.9 58.2 0.0 0.0 0.361412 33929 35724 1718-2257 0.985507 88.5 trnT-GGU-psbD_p4 trnT-GGU-psbD 4 GTGGTAGAGTAACGCCATGG CAAAAACGAAACGGTCCCTC 20 20 55.0 50.0 58.1 57.6 7.6 0.0 0.458613 33929 35724 1701-2240 0.971014 87.2 trnT-GGU-psbD_p5 trnT-GGU-psbD 5 TCAGTGGTAGAGTAACGCCA CAAAAACGAAACGGTCCCTC 20 20 50.0 50.0 58.1 57.6 0.0 0.0 0.480767 33929 35724 1704-2243 0.971014 87.0 psbZ-trnG-GCC_p1 psbZ-trnG-GCC 1 AGGTATCCTTAATTCTCTCATCTCT CGTCTTCTCCTTGGCAAAGA 25 20 36.0 50.0 56.3 57.8 0.0 1.1 6.827174 39012 40466 580-1601 0.985507 51.4 psbZ-trnG-GCC_p2 psbZ-trnG-GCC 2 TCCTTAATTCTCTCATCTCTTGA CGTCTTCTCCTTGGCAAAGA 23 20 34.8 50.0 54.3 57.8 0.0 1.1 6.894900 39012 40466 575-1596 0.985507 51.4 psbZ-trnG-GCC_p3 psbZ-trnG-GCC 3 AGGTATCCTTAATTCTCTCATCTC CGTCTTCTCCTTGGCAAAGA 24 20 37.5 50.0 55.0 57.8 0.0 1.1 7.178777 39012 40466 580-1601 0.985507 51.4 psbZ-trnG-GCC_p4 psbZ-trnG-GCC 4 GGTATCCTTAATTCTCTCATCTCT CGTCTTCTCCTTGGCAAAGA 24 20 37.5 50.0 55.0 57.8 0.0 1.1 7.178777 39012 40466 579-1600 0.985507 51.4 psbZ-trnG-GCC_p5 psbZ-trnG-GCC 5 AGGTATCCTTAATTCTCTCATCTCTT CGTCTTCTCCTTGGCAAAGA 26 20 34.6 50.0 57.0 57.8 0.0 1.1 7.197665 39012 40466 580-1601 0.985507 51.4 psaA-pafI_p1 psaA-pafI 1 AGAGTTGGCCAAAATGAGCA GAATTGACTGCTGAGCCGTA 20 20 45.0 50.0 58.0 58.0 22.5 0.3 0.010497 45863 46943 1215-1643 1.000000 91.9 psaA-pafI_p2 psaA-pafI 2 ATGCCACTCAGCCAAAGAAA GAATTGACTGCTGAGCCGTA 20 20 45.0 50.0 58.0 58.0 0.0 0.3 0.010497 45863 46943 1243-1671 1.000000 91.9 psaA-pafI_p3 psaA-pafI 3 AGAGTTGGCCAAAATGAGCA CTGAGCCGTATGAGGTAGGA 20 20 45.0 55.0 58.0 58.0 22.5 0.0 0.017692 45863 46943 1205-1633 1.000000 91.9 psaA-pafI_p4 psaA-pafI 4 ATGCCACTCAGCCAAAGAAA CTGAGCCGTATGAGGTAGGA 20 20 45.0 55.0 58.0 58.0 0.0 0.0 0.017692 45863 46943 1233-1661 1.000000 91.9 psaA-pafI_p5 psaA-pafI 5 ACATGTACTTGATGTCCCGC GAATTGACTGCTGAGCCGTA 20 20 50.0 50.0 58.0 58.0 15.1 0.3 0.034321 45863 46943 1630-2058 1.000000 91.7 rps4-trnT-UGU_p1 rps4-trnT-UGU 1 CCCCAGACGGCGTATTTTT CTCAGAGGTTAGAGCATCGC 19 20 52.6 55.0 58.1 57.9 14.7 0.0 1.270002 50340 50778 527-604 1.000000 81.8 rps4-trnT-UGU_p2 rps4-trnT-UGU 2 CCCCAGACGGCGTATTTTT GATGGTCATCGGTTCGACTC 19 20 52.6 55.0 58.1 58.2 14.7 0.0 1.295812 50340 50778 496-573 1.000000 81.6 rps4-trnT-UGU_p3 rps4-trnT-UGU 3 AGTTAGTCCCGGTAAAGCCC CTCAGAGGTTAGAGCATCGC 20 20 55.0 55.0 59.1 57.9 0.0 0.0 1.225254 50340 50778 545-622 0.985507 81.6 rps4-trnT-UGU_p4 rps4-trnT-UGU 4 AGTTAGTCCCGGTAAAGCCC GATGGTCATCGGTTCGACTC 20 20 55.0 55.0 59.1 58.2 0.0 0.0 1.251064 50340 50778 514-591 0.985507 81.4 rps4-trnT-UGU_p5 rps4-trnT-UGU 5 AGTTAGTCCCGGTAAAGCCC ATTTCTGGTATGTGAGCCCG 20 20 55.0 50.0 59.1 57.7 0.0 0.0 1.424577 50340 50778 570-647 0.971014 79.4 ndhC-trnV-UAC_p1 ndhC-trnV-UAC 1 GCCCCCATCGCAATAACATA TAGTGCTCTCGGATCGGAAT 20 20 50.0 50.0 58.1 58.0 0.0 4.4 0.113053 54420 55632 2137-2752 0.913043 87.6 ndhC-trnV-UAC_p2 ndhC-trnV-UAC 2 ATTGTAACCAAGCATCGCCT TAGTGCTCTCGGATCGGAAT 20 20 45.0 50.0 57.9 58.0 0.0 4.4 0.146110 54420 55632 1569-2184 0.913043 87.4 ndhC-trnV-UAC_p3 ndhC-trnV-UAC 3 TGGTTCAGGCATTTGCTCAT TAGTGCTCTCGGATCGGAAT 20 20 45.0 50.0 58.1 58.0 2.1 4.4 0.089852 54420 55632 350-2697 0.130435 56.5 ndhC-trnV-UAC_p4 ndhC-trnV-UAC 4 TGGTTCAGGCATTTGCTCAT TGTATCACAAACCCAAGGGC 20 20 45.0 50.0 58.1 58.1 2.1 4.7 0.154641 54420 55632 796-2601 0.086957 53.3 ndhC-trnV-UAC_p5 ndhC-trnV-UAC 5 TGGTTCAGGCATTTGCTCAT CGGGGCAATTTAGGTATCCC 20 20 45.0 55.0 58.1 58.1 2.1 0.0 0.166875 54420 55632 2410-2429 0.057971 42.0 rbcL-accD_p1 rbcL-accD 1 TTGAATGCTACTGCGGGTAC AATGTCCCTGACACCGACTA 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.085520 60934 61724 1598-1718 0.942029 89.0 rbcL-accD_p2 rbcL-accD 2 TTGAATGCTACTGCGGGTAC ATGTCCCTGACACCGACTAA 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.085520 60934 61724 1597-1717 0.942029 89.0 rbcL-accD_p3 rbcL-accD 3 AATGAGGGACGTGATCTTGC ATGTCCCTGACACCGACTAA 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.096817 60934 61724 1021-1141 0.927536 88.3 rbcL-accD_p4 rbcL-accD 4 AATGAGGGACGTGATCTTGC TCGCTTTCACCACAAACGTA 20 20 50.0 45.0 58.0 58.1 0.0 0.0 0.092560 60934 61724 1429-1501 0.086957 51.2 rbcL-accD_p5 rbcL-accD 5 TTGAATGCTACTGCGGGTAC TCGCTTTCACCACAAACGTA 20 20 50.0 45.0 58.0 58.1 0.0 0.0 0.081264 60934 61724 2005-2077 0.086957 49.5 accD-psaI_p1 accD-psaI 1 GACAGGATTAACCGAGGCTG CCATTGCAATTGCCGGAAAT 20 20 55.0 45.0 58.1 58.0 0.0 26.9 0.085678 63225 64514 1679-2423 1.000000 91.3 accD-psaI_p2 accD-psaI 2 GACAGGATTAACCGAGGCTG GTTCTGAGCGCCAACTCATA 20 20 55.0 50.0 58.1 58.0 0.0 2.3 0.068820 63225 64514 2042-2782 0.942029 89.1 accD-psaI_p3 accD-psaI 3 GACAGGATTAACCGAGGCTG TATGTTCTGAGCGCCAACTC 20 20 55.0 50.0 58.1 58.0 0.0 2.3 0.068820 63225 64514 2045-2785 0.942029 89.1 accD-psaI_p4 accD-psaI 4 GACAGGATTAACCGAGGCTG TTCTGAGCGCCAACTCATAC 20 20 55.0 50.0 58.1 58.0 0.0 2.3 0.068820 63225 64514 2041-2781 0.942029 89.1 accD-psaI_p5 accD-psaI 5 AGTATGGGATCCGTCGTAGG TTCTGAGCGCCAACTCATAC 20 20 55.0 50.0 58.1 58.0 5.5 2.3 0.103155 63225 64514 1947-2687 0.942029 88.9 rpl16_p1 rpl16 1 ACACATCAATTCTCGGGCTC AATTGCACGAGTCGAATGGA 20 20 50.0 45.0 58.0 57.9 0.0 21.5 0.123145 88348 89953 2070-2383 0.956522 89.3 rpl16_p2 rpl16 2 ACACATCAATTCTCGGGCTC TTGCACGAGTCGAATGGATT 20 20 50.0 45.0 58.0 57.9 0.0 21.5 0.123145 88348 89953 2068-2381 0.956522 89.3 rpl16_p3 rpl16 3 CTGCTTCCTTGATCACAGCA TTGCACGAGTCGAATGGATT 20 20 50.0 45.0 58.2 57.9 14.3 21.5 0.275949 88348 89953 2144-2457 0.985507 89.2 rpl16_p4 rpl16 4 AGCAACAATAACGTCACCGA AATTGCACGAGTCGAATGGA 20 20 45.0 45.0 57.8 57.9 0.0 21.5 0.251140 88348 89953 2130-2443 0.942029 87.7 rpl16_p5 rpl16 5 AGCAACAATAACGTCACCGA TTGCACGAGTCGAATGGATT 20 20 45.0 45.0 57.8 57.9 0.0 21.5 0.251140 88348 89953 2128-2441 0.942029 87.7 ycf1_p1 ycf1 1 GAGCTACTGAGGAACAACGG AGCGGTCGCATTTCTTCTTA 20 20 55.0 45.0 58.0 57.6 0.0 17.7 0.382415 117128 118294 1374-2638 0.898551 84.9 ycf1_p2 ycf1 2 GAGCTACTGAGGAACAACGG CAATGGAGTCGGTGTTACGA 20 20 55.0 50.0 58.0 57.6 0.0 0.0 0.359658 117128 118294 1666-1815 0.086957 47.2 ycf1_p3 ycf1 3 GAGCTACTGAGGAACAACGG TCAATGGAGTCGGTGTTACG 20 20 55.0 50.0 58.0 57.6 0.0 0.0 0.359658 117128 118294 1667-1816 0.086957 47.2 ycf1_p4 ycf1 4 CCCCTTTGGTGTCATTGACA CAATGGAGTCGGTGTTACGA 20 20 50.0 50.0 58.0 57.6 15.4 0.0 0.363371 117128 118294 1461-1610 0.072464 42.6 ycf1_p5 ycf1 5 CCCCTTTGGTGTCATTGACA TCAATGGAGTCGGTGTTACG 20 20 50.0 50.0 58.0 57.6 15.4 0.0 0.363371 117128 118294 1462-1611 0.072464 42.6 ndhF-trnL-UAG_p1 ndhF-trnL-UAG 1 TAGGGCGTGTGAACCAAAAA TCCACACAAAAGAGCTGCAT 20 20 45.0 45.0 57.9 58.0 0.0 1.0 0.068759 120571 122187 1620-2942 0.927536 88.6 ndhF-trnL-UAG_p2 ndhF-trnL-UAG 2 AATTCGAAGCTGCCCGTTAT TCCACACAAAAGAGCTGCAT 20 20 45.0 45.0 58.0 58.0 3.3 1.0 0.052914 120571 122187 1726-2997 0.869565 86.4 ndhF-trnL-UAG_p3 ndhF-trnL-UAG 3 AATTCGAAGCTGCCCGTTAT ATCCACACAAAAGAGCTGCA 20 20 45.0 45.0 58.0 58.0 3.3 1.0 0.052914 120571 122187 1727-2998 0.855072 85.8 ndhF-trnL-UAG_p4 ndhF-trnL-UAG 4 TGTTGTCGCCGGAAAAAGTA ATCCACACAAAAGAGCTGCA 20 20 45.0 45.0 58.0 58.0 5.0 1.0 0.063699 120571 122187 1212-2534 0.289855 63.1 ndhF-trnL-UAG_p5 ndhF-trnL-UAG 5 TGTTGTCGCCGGAAAAAGTA TCCACACAAAAGAGCTGCAT 20 20 45.0 45.0 58.0 58.0 5.0 1.0 0.063699 120571 122187 1211-2533 0.289855 63.1