feature_id feature_type parent_gene label_name start end strand length_bp region pi variable_sites indel_sites conserved_left_bp conserved_right_bp primer_available species_resolution unique_haplotype_count species_specific_haplotype_ratio interspecific_divergence alignment_reliability markerseek_score psbA gene psbA psbA 57 1118 -1 1062 LSC 0.001731 10 0 54 48 no 0.285714 8 0.750000 0.001731 1.000000 35.900000 IGS_001 igs psbA|trnK-UUU psbA-trnK-UUU 1119 1367 0 249 LSC 0.015070 13 0 300 116 no 0.190476 10 0.400000 0.015070 1.000000 44.300000 trnK-UUU_part2 tRNA trnK-UUU trnK-UUU 1368 1402 -1 35 LSC 0.000000 0 0 20 81 no 0.000000 1 0.000000 0.000000 1.000000 20.200000 matK gene matK matK 1705 3261 -1 1557 LSC 0.004000 36 0 150 50 no 0.666667 16 0.875000 0.004000 1.000000 45.800000 IGS_004 igs matK|trnK-UUU matK-trnK-UUU 3262 4016 0 755 LSC 0.005868 18 6 16 176 no 0.619048 16 0.812500 0.005846 0.998675 44.400000 trnK-UUU_part1 tRNA trnK-UUU trnK-UUU 4017 4053 -1 37 LSC 0.000000 0 0 186 139 no 0.000000 1 0.000000 0.000000 1.000000 29.200000 IGS_005 igs trnK-UUU|rps16 trnK-UUU-rps16 4054 4483 0 430 LSC 0.003920 12 12 223 21 no 0.619048 14 0.928571 0.003956 1.000000 43.300000 rps16 gene rps16 rps16 4484 5617 -1 1134 LSC 0.003636 21 7 50 14 no 0.666667 17 0.823529 0.003524 0.998236 43.200000 IGS_006 igs rps16|trnQ-UUG rps16-trnQ-UUG 5618 6628 0 1011 LSC 0.006424 29 319 123 105 yes 0.714286 18 0.833333 0.005340 1.000000 55.900000 trnQ-UUG tRNA trnQ-UUG trnQ-UUG 6629 6701 -1 73 LSC 0.002479 1 0 43 32 no 0.000000 2 0.000000 0.002479 1.000000 24.000000 IGS_007 igs trnQ-UUG|psbK trnQ-UUG-psbK 6702 7054 0 353 LSC 0.006583 10 11 116 180 no 0.571429 14 0.857143 0.006676 0.997167 49.400000 psbK gene psbK psbK 7055 7240 1 186 LSC 0.003175 2 0 74 14 no 0.047619 3 0.333333 0.003175 1.000000 23.500000 IGS_008 igs psbK|psbI psbK-psbI 7241 7594 0 354 LSC 0.006691 13 10 5 158 no 0.571429 15 0.800000 0.006816 0.994350 41.700000 psbI gene psbI psbI 7595 7705 1 111 LSC 0.002574 3 2 46 47 no 0.095238 5 0.400000 0.002593 0.990991 30.400000 IGS_009 igs psbI|trnS-GCU psbI-trnS-GCU 7706 7829 0 124 LSC 0.012609 5 16 157 132 no 0.333333 10 0.700000 0.012340 0.959677 50.000000 trnS-GCU tRNA trnS-GCU trnS-GCU 7830 7917 -1 88 LSC 0.000000 0 0 11 44 no 0.000000 1 0.000000 0.000000 1.000000 19.600000 IGS_010 igs trnS-GCU|trnG-UCC trnS-GCU-trnG-UCC 7918 8802 0 885 LSC 0.011881 47 49 99 188 yes 0.904762 20 0.950000 0.010755 0.992090 67.000000 trnG-UCC_part1 tRNA trnG-UCC trnG-UCC 8803 8825 1 23 LSC 0.000000 0 0 56 165 no 0.000000 1 0.000000 0.000000 1.000000 22.900000 trnG-UCC_part2 tRNA trnG-UCC trnG-UCC 9513 9561 1 49 LSC 0.000000 0 0 179 49 no 0.000000 1 0.000000 0.000000 1.000000 22.400000 IGS_013 igs trnG-UCC|trnR-UCU trnG-UCC-trnR-UCU 9562 9711 0 150 LSC 0.015789 8 6 228 81 no 0.285714 10 0.600000 0.013682 0.980000 48.200000 trnR-UCU tRNA trnR-UCU trnR-UCU 9712 9783 1 72 LSC 0.000000 0 0 38 9 no 0.000000 1 0.000000 0.000000 1.000000 19.400000 IGS_014 igs trnR-UCU|atpA trnR-UCU-atpA 9784 9877 0 94 LSC 0.011753 5 0 110 237 no 0.142857 6 0.500000 0.011753 1.000000 41.600000 atpA gene atpA atpA 9878 11401 -1 1524 LSC 0.002475 20 0 8 107 no 0.523810 13 0.846154 0.002475 1.000000 38.100000 IGS_015 igs atpA|atpF atpA-atpF 11402 11472 0 71 LSC 0.000000 0 0 300 36 no 0.000000 1 0.000000 0.000000 1.000000 21.400000 atpF gene atpF atpF 11473 12839 -1 1367 LSC 0.005445 27 55 300 122 no 0.571429 16 0.750000 0.004492 0.997805 54.400000 IGS_016 igs atpF|atpH atpF-atpH 12840 13366 0 527 LSC 0.005422 14 281 47 300 no 0.476190 14 0.714286 0.005452 1.000000 46.800000 atpH gene atpH atpH 13367 13612 -1 246 LSC 0.000387 1 0 300 261 no 0.047619 2 0.500000 0.000387 1.000000 35.300000 IGS_017 igs atpH|atpI atpH-atpI 13613 14138 0 526 LSC 0.003748 8 2 300 300 no 0.190476 8 0.500000 0.003616 1.000000 46.100000 atpI gene atpI atpI 14139 14882 -1 744 LSC 0.001306 6 0 224 25 no 0.142857 5 0.600000 0.001306 1.000000 31.100000 IGS_018 igs atpI|rps2 atpI-rps2 14883 15128 0 246 LSC 0.009923 8 11 272 300 no 0.285714 12 0.500000 0.009442 0.995935 52.900000 rps2 gene rps2 rps2 15129 15839 -1 711 LSC 0.000670 5 0 127 65 no 0.238095 6 0.833333 0.000670 1.000000 35.500000 IGS_019 igs rps2|rpoC2 rps2-rpoC2 15840 16028 0 189 LSC 0.006677 4 4 300 75 no 0.142857 9 0.333333 0.006330 0.994709 35.000000 rpoC2 gene rpoC2 rpoC2 16029 20165 -1 4137 LSC 0.002659 50 0 9 300 no 0.714286 17 0.882353 0.002659 1.000000 36.900000 IGS_020 igs rpoC2|rpoC1 rpoC2-rpoC1 20166 20347 0 182 LSC 0.001047 2 0 276 300 no 0.095238 3 0.666667 0.001047 1.000000 37.400000 rpoC1 gene rpoC1 rpoC1 20348 23146 -1 2799 LSC 0.001980 25 17 300 300 no 0.619048 16 0.812500 0.001982 1.000000 51.700000 IGS_021 igs rpoC1|rpoB rpoC1-rpoB 23147 23172 0 26 LSC 0.000000 0 0 164 300 no 0.000000 1 0.000000 0.000000 1.000000 31.100000 rpoB gene rpoB rpoB 23173 26385 -1 3213 LSC 0.001601 24 0 190 130 no 0.380952 13 0.615385 0.001601 1.000000 40.100000 IGS_022 igs rpoB|trnC-GCA rpoB-trnC-GCA 26386 27570 0 1185 LSC 0.005470 30 8 22 88 no 0.666667 16 0.875000 0.005490 0.999156 45.500000 trnC-GCA tRNA trnC-GCA trnC-GCA 27571 27651 1 81 LSC 0.002234 1 0 149 7 no 0.000000 2 0.000000 0.002234 1.000000 21.800000 IGS_023 igs trnC-GCA|petN trnC-GCA-petN 27652 28271 0 620 LSC 0.003986 14 8 230 59 no 0.428571 14 0.642857 0.003988 0.990323 43.300000 petN gene petN petN 28272 28361 1 90 LSC 0.005503 1 0 300 300 no 0.000000 2 0.000000 0.005503 1.000000 37.600000 IGS_024 igs petN|psbM petN-psbM 28362 29430 0 1069 LSC 0.003713 21 24 30 300 no 0.619048 16 0.812500 0.003741 0.991581 45.400000 psbM gene psbM psbM 29431 29535 -1 105 LSC 0.000000 0 0 246 213 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_025 igs psbM|trnD-GUC psbM-trnD-GUC 29536 30536 0 1001 LSC 0.007148 32 16 300 176 yes 0.619048 16 0.812500 0.007096 1.000000 59.000000 trnD-GUC tRNA trnD-GUC trnD-GUC 30537 30610 -1 74 LSC 0.000000 0 0 80 102 no 0.000000 1 0.000000 0.000000 1.000000 24.800000 IGS_026 igs trnD-GUC|trnY-GUA trnD-GUC-trnY-GUA 30611 30934 0 324 LSC 0.004733 8 2 154 144 no 0.238095 8 0.625000 0.004740 1.000000 40.500000 trnY-GUA tRNA trnY-GUA trnY-GUA 30935 31018 -1 84 LSC 0.000000 0 0 104 60 no 0.000000 1 0.000000 0.000000 1.000000 23.200000 IGS_027 igs trnY-GUA|trnE-UUC trnY-GUA-trnE-UUC 31019 31083 0 65 LSC 0.009084 2 0 188 199 no 0.047619 3 0.333333 0.009084 1.000000 41.700000 trnE-UUC tRNA trnE-UUC trnE-UUC 31084 31156 -1 73 LSC 0.000000 0 0 4 126 no 0.000000 1 0.000000 0.000000 1.000000 19.100000 IGS_028 igs trnE-UUC|trnT-GGU trnE-UUC-trnT-GGU 31157 31523 0 367 LSC 0.008964 15 9 77 110 no 0.666667 15 0.933333 0.008975 0.997275 50.400000 trnT-GGU tRNA trnT-GGU trnT-GGU 31524 31595 1 72 LSC 0.000000 0 0 51 38 no 0.000000 1 0.000000 0.000000 1.000000 21.600000 IGS_029 igs trnT-GGU|psbD trnT-GGU-psbD 31596 32572 0 977 LSC 0.003236 15 13 123 143 no 0.380952 11 0.727273 0.003252 1.000000 46.300000 psbD gene psbD psbD 32573 33634 1 1062 LSC 0.000825 5 0 268 300 no 0.190476 6 0.666667 0.000825 1.000000 44.500000 psbC gene psbC psbC 33582 35003 1 1422 LSC 0.001674 10 0 300 54 no 0.142857 10 0.300000 0.001674 1.000000 33.400000 IGS_031 igs psbC|trnS-UGA psbC-trnS-UGA 35004 35142 0 139 LSC 0.028160 10 1 300 300 yes 0.238095 8 0.625000 0.028212 1.000000 60.700000 trnS-UGA tRNA trnS-UGA trnS-UGA 35143 35230 -1 88 LSC 0.001082 1 0 78 300 no 0.047619 2 0.500000 0.001082 1.000000 27.400000 IGS_032 igs trnS-UGA|psbZ trnS-UGA-psbZ 35231 35583 0 353 LSC 0.000809 3 0 166 158 no 0.142857 4 0.750000 0.000809 1.000000 35.800000 psbZ gene psbZ psbZ 35584 35772 1 189 LSC 0.001361 1 0 300 111 no 0.000000 2 0.000000 0.001361 1.000000 28.300000 IGS_033 igs psbZ|trnG-GCC psbZ-trnG-GCC 35773 36101 0 329 LSC 0.003319 5 28 30 186 no 0.333333 10 0.700000 0.002821 1.000000 36.700000 trnG-GCC tRNA trnG-GCC trnG-GCC 36102 36172 1 71 LSC 0.000000 0 0 217 115 no 0.000000 1 0.000000 0.000000 1.000000 27.400000 IGS_034 igs trnG-GCC|trnfM-CAU trnG-GCC-trnfM-CAU 36173 36368 0 196 LSC 0.006876 4 4 288 93 no 0.285714 11 0.545455 0.006940 0.994898 39.000000 trnfM-CAU tRNA trnfM-CAU trnfM-CAU 36369 36442 -1 74 LSC 0.000000 0 0 24 19 no 0.000000 1 0.000000 0.000000 1.000000 20.200000 IGS_035 igs trnfM-CAU|rps14 trnfM-CAU-rps14 36443 36600 0 158 LSC 0.010127 4 0 98 9 no 0.095238 5 0.400000 0.010127 1.000000 28.900000 rps14 gene rps14 rps14 36601 36903 -1 303 LSC 0.004840 4 0 11 149 no 0.047619 5 0.200000 0.004840 1.000000 24.400000 IGS_036 igs rps14|psaB rps14-psaB 36904 37031 0 128 LSC 0.000744 1 0 156 21 no 0.047619 2 0.500000 0.000744 1.000000 22.500000 psaB gene psaB psaB 37032 39236 -1 2205 LSC 0.001594 21 0 284 300 no 0.380952 12 0.666667 0.001594 1.000000 47.600000 IGS_037 igs psaB|psaA psaB-psaA 39237 39261 0 25 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 psaA gene psaA psaA 39262 41514 -1 2253 LSC 0.001716 17 0 300 237 no 0.238095 10 0.500000 0.001716 1.000000 44.600000 IGS_038 igs psaA|ycf3 psaA-ycf3 41515 41986 0 472 LSC 0.004641 11 3 179 300 no 0.476190 14 0.714286 0.004656 0.997881 50.400000 ycf3 gene ycf3 ycf3 41987 43983 -1 1997 LSC 0.001879 19 15 72 88 no 0.666667 17 0.823529 0.001886 0.999499 44.800000 IGS_039 igs ycf3|trnS-GGA ycf3-trnS-GGA 43984 44462 0 479 LSC 0.003897 13 1 300 300 no 0.380952 10 0.800000 0.003903 1.000000 50.000000 trnS-GGA tRNA trnS-GGA trnS-GGA 44463 44549 1 87 LSC 0.000000 0 0 280 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_040 igs trnS-GGA|rps4 trnS-GGA-rps4 44550 44850 0 301 LSC 0.004683 13 1 300 300 no 0.190476 8 0.500000 0.004695 1.000000 45.200000 rps4 gene rps4 rps4 44851 45456 -1 606 LSC 0.001132 3 0 300 232 no 0.095238 4 0.500000 0.001132 1.000000 42.900000 IGS_041 igs rps4|trnT-UGU rps4-trnT-UGU 45457 45800 0 344 LSC 0.004762 7 10 113 83 no 0.476190 14 0.714286 0.004842 0.997093 42.800000 trnT-UGU tRNA trnT-UGU trnT-UGU 45801 45873 -1 73 LSC 0.000000 0 0 7 10 no 0.000000 1 0.000000 0.000000 1.000000 19.300000 IGS_042 igs trnT-UGU|trnL-UAA trnT-UGU-trnL-UAA 45874 46850 0 977 LSC 0.009374 41 494 80 229 yes 0.809524 18 0.944444 0.008826 0.995906 59.300000 trnL-UAA_part1 tRNA trnL-UAA trnL-UAA 46851 46887 1 37 LSC 0.000000 0 0 71 192 no 0.000000 1 0.000000 0.000000 1.000000 24.100000 trnL-UAA_part2 tRNA trnL-UAA trnL-UAA 47390 47439 1 50 LSC 0.009905 1 0 300 36 no 0.000000 2 0.000000 0.009905 1.000000 28.400000 IGS_045 igs trnL-UAA|trnF-GAA trnL-UAA-trnF-GAA 47440 47914 0 475 LSC 0.015943 34 73 26 74 yes 0.761905 18 0.888889 0.013411 0.962105 58.800000 trnF-GAA tRNA trnF-GAA trnF-GAA 47915 47987 1 73 LSC 0.000000 0 0 8 1 no 0.000000 1 0.000000 0.000000 1.000000 18.800000 IGS_046 igs trnF-GAA|ndhJ trnF-GAA-ndhJ 47988 48701 0 714 LSC 0.007516 30 384 81 199 yes 0.619048 15 0.866667 0.007986 0.992997 55.700000 ndhJ gene ndhJ ndhJ 48702 49178 -1 477 LSC 0.001637 4 0 28 16 no 0.142857 5 0.600000 0.001637 1.000000 28.100000 IGS_047 igs ndhJ|ndhK ndhJ-ndhK 49179 49259 0 81 LSC 0.008348 2 0 277 60 no 0.000000 3 0.000000 0.008348 1.000000 30.100000 ndhK gene ndhK ndhK 49260 49961 -1 702 LSC 0.001777 5 0 64 300 no 0.190476 6 0.666667 0.001777 1.000000 35.100000 IGS_048 igs ndhK|ndhC ndhK-ndhC 49962 50020 0 59 LSC 0.001614 1 0 300 300 no 0.047619 2 0.500000 0.001614 1.000000 37.500000 ndhC gene ndhC ndhC 50021 50383 -1 363 LSC 0.002151 4 0 300 67 no 0.142857 5 0.600000 0.002151 1.000000 30.100000 IGS_049 igs ndhC|trnV-UAC ndhC-trnV-UAC 50384 51698 0 1315 LSC 0.005923 40 349 54 300 no 0.714286 17 0.882353 0.005999 1.000000 54.400000 trnV-UAC_part2 tRNA trnV-UAC trnV-UAC 51699 51735 -1 37 LSC 0.002574 1 0 70 300 no 0.047619 2 0.500000 0.002574 1.000000 29.400000 trnV-UAC_part1 tRNA trnV-UAC trnV-UAC 52326 52364 -1 39 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_052 igs trnV-UAC|trnM-CAU trnV-UAC-trnM-CAU 52365 52522 0 158 LSC 0.002351 3 0 300 300 no 0.142857 4 0.750000 0.002351 1.000000 39.900000 trnM-CAU tRNA trnM-CAU trnM-CAU 52523 52595 1 73 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_053 igs trnM-CAU|atpE trnM-CAU-atpE 52596 52754 0 159 LSC 0.001138 1 0 300 294 no 0.000000 2 0.000000 0.001138 1.000000 35.000000 atpE gene atpE atpE 52755 53159 -1 405 LSC 0.001670 2 0 300 146 no 0.000000 3 0.000000 0.001670 1.000000 33.300000 atpB gene atpB atpB 53156 54652 -1 1497 LSC 0.003003 16 0 106 228 no 0.476190 12 0.833333 0.003003 1.000000 44.600000 IGS_055 igs atpB|rbcL atpB-rbcL 54653 55442 0 790 LSC 0.005045 19 3 233 291 no 0.380952 13 0.615385 0.005051 1.000000 52.900000 rbcL gene rbcL rbcL 55443 56897 1 1455 LSC 0.003319 21 0 286 235 no 0.238095 11 0.454545 0.003319 1.000000 47.800000 IGS_056 igs rbcL|accD rbcL-accD 56898 57691 0 794 LSC 0.005038 17 6 163 300 no 0.380952 11 0.727273 0.005050 1.000000 50.200000 accD gene accD accD 57692 59170 1 1479 LSC 0.003638 29 72 50 19 no 0.476190 15 0.666667 0.003645 1.000000 45.500000 IGS_057 igs accD|psaI accD-psaI 59171 59579 0 409 LSC 0.002119 4 73 44 243 no 0.142857 6 0.500000 0.002149 1.000000 35.200000 psaI gene psaI psaI 59580 59690 1 111 LSC 0.000000 0 0 300 132 no 0.000000 1 0.000000 0.000000 1.000000 28.600000 IGS_058 igs psaI|ycf4 psaI-ycf4 59691 60036 0 346 LSC 0.006441 9 0 300 293 no 0.238095 9 0.555556 0.006441 1.000000 45.300000 ycf4 gene ycf4 ycf4 60037 60591 1 555 LSC 0.001888 5 0 125 35 no 0.190476 7 0.571429 0.001888 1.000000 32.200000 IGS_059 igs ycf4|cemA ycf4-cemA 60592 61444 0 853 LSC 0.009008 35 24 261 203 yes 0.714286 18 0.833333 0.008107 0.987104 65.700000 cemA gene cemA cemA 61445 62134 1 690 LSC 0.002650 9 0 71 42 no 0.190476 8 0.500000 0.002650 1.000000 34.500000 IGS_060 igs cemA|petA cemA-petA 62135 62353 0 219 LSC 0.006306 5 0 300 227 no 0.142857 6 0.500000 0.006306 1.000000 42.100000 petA gene petA petA 62354 63316 1 963 LSC 0.001899 9 0 68 1 no 0.238095 8 0.625000 0.001899 1.000000 31.600000 IGS_061 igs petA|psbJ petA-psbJ 63317 64424 0 1108 LSC 0.004942 32 17 300 64 no 0.761905 18 0.888889 0.004955 1.000000 51.800000 psbJ gene psbJ psbJ 64425 64547 -1 123 LSC 0.004026 1 0 146 7 no 0.000000 2 0.000000 0.004026 1.000000 22.100000 IGS_062 igs psbJ|psbL psbJ-psbL 64548 64672 0 125 LSC 0.004114 3 0 58 300 no 0.095238 4 0.500000 0.004114 1.000000 29.700000 psbL gene psbL psbL 64673 64789 -1 117 LSC 0.000000 0 0 117 300 no 0.000000 1 0.000000 0.000000 1.000000 27.500000 IGS_063 igs psbL|psbF psbL-psbF 64790 64811 0 22 LSC 0.000000 0 0 234 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 psbF gene psbF psbF 64812 64931 -1 120 LSC 0.003095 3 0 256 300 no 0.095238 4 0.500000 0.003095 1.000000 40.100000 IGS_064 igs psbF|psbE psbF-psbE 64932 64941 0 10 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 psbE gene psbE psbE 64942 65193 -1 252 LSC 0.000000 0 0 300 49 no 0.000000 1 0.000000 0.000000 1.000000 22.400000 IGS_065 igs psbE|petL psbE-petL 65194 66455 0 1262 LSC 0.006871 36 12 300 170 no 0.523810 14 0.785714 0.006884 1.000000 55.400000 petL gene petL petL 66456 66551 1 96 LSC 0.000000 0 0 81 74 no 0.000000 1 0.000000 0.000000 1.000000 24.300000 IGS_066 igs petL|petG petL-petG 66552 66741 0 190 LSC 0.004110 4 3 177 148 no 0.333333 9 0.777778 0.004125 1.000000 42.500000 petG gene petG petG 66742 66855 1 114 LSC 0.000000 0 0 115 34 no 0.000000 1 0.000000 0.000000 1.000000 21.300000 IGS_067 igs petG|trnW-CCA petG-trnW-CCA 66856 66975 0 120 LSC 0.017302 5 0 229 300 no 0.047619 3 0.333333 0.017302 1.000000 47.600000 trnW-CCA tRNA trnW-CCA trnW-CCA 66976 67049 -1 74 LSC 0.000000 0 0 80 300 no 0.000000 1 0.000000 0.000000 1.000000 24.800000 IGS_068 igs trnW-CCA|trnP-UGG trnW-CCA-trnP-UGG 67050 67212 0 163 LSC 0.000613 1 82 154 212 no 0.095238 3 0.666667 0.000555 1.000000 38.600000 trnP-UGG tRNA trnP-UGG trnP-UGG 67213 67286 -1 74 LSC 0.000000 0 0 300 138 no 0.000000 1 0.000000 0.000000 1.000000 29.100000 IGS_069 igs trnP-UGG|psaJ trnP-UGG-psaJ 67287 67515 0 229 LSC 0.004511 6 1 300 158 no 0.142857 6 0.500000 0.004511 0.995633 38.900000 psaJ gene psaJ psaJ 67516 67644 1 129 LSC 0.002141 2 0 90 29 no 0.047619 3 0.333333 0.002141 1.000000 24.700000 IGS_070 igs psaJ|rpl33 psaJ-rpl33 67645 68120 0 476 LSC 0.006403 11 1 219 238 no 0.238095 8 0.625000 0.006416 0.997899 47.800000 rpl33 gene rpl33 rpl33 68121 68321 1 201 LSC 0.000900 1 0 22 37 no 0.000000 2 0.000000 0.000900 1.000000 21.400000 IGS_071 igs rpl33|rps18 rpl33-rps18 68322 68482 0 161 LSC 0.006093 5 0 223 300 no 0.190476 6 0.666667 0.006093 1.000000 43.900000 rps18 gene rps18 rps18 68483 68788 1 306 LSC 0.000311 1 0 123 72 no 0.047619 2 0.500000 0.000311 1.000000 25.700000 IGS_072 igs rps18|rpl20 rps18-rpl20 68789 69067 0 279 LSC 0.007271 12 2 300 300 no 0.285714 10 0.600000 0.007286 1.000000 48.600000 rpl20 gene rpl20 rpl20 69068 69421 -1 354 LSC 0.001829 5 0 151 64 no 0.142857 5 0.600000 0.001829 1.000000 29.900000 IGS_073 igs rpl20|rps12 rpl20-rps12 69422 70176 0 755 LSC 0.007480 20 1 300 211 no 0.285714 11 0.545455 0.007487 1.000000 52.200000 rps12_part1 gene rps12 rps12 70177 70290 -1 114 LSC 0.000000 0 0 84 97 no 0.000000 1 0.000000 0.000000 1.000000 25.100000 IGS_074 igs rps12|clpP rps12-clpP 70291 70416 0 126 LSC 0.005442 3 0 198 258 no 0.095238 4 0.500000 0.005442 1.000000 40.800000 clpP gene clpP clpP 70417 72501 -1 2085 LSC 0.003722 42 38 28 112 no 0.904762 20 0.950000 0.003705 0.998561 49.200000 IGS_075 igs clpP|psbB clpP-psbB 72502 72929 0 428 LSC 0.004762 13 0 300 300 no 0.428571 12 0.750000 0.004762 1.000000 50.400000 psbB gene psbB psbB 72930 74456 1 1527 LSC 0.001952 13 0 257 140 no 0.333333 11 0.636364 0.001952 1.000000 43.600000 IGS_076 igs psbB|psbT psbB-psbT 74457 74666 0 210 LSC 0.005896 7 4 300 77 no 0.428571 11 0.818182 0.005991 0.990476 41.300000 psbT gene psbT psbT 74667 74768 1 102 LSC 0.004015 1 0 69 300 no 0.000000 3 0.000000 0.004015 1.000000 27.000000 IGS_077 igs psbT|psbN psbT-psbN 74769 74837 0 69 LSC 0.008144 5 0 24 297 no 0.142857 4 0.750000 0.008144 1.000000 36.000000 psbN gene psbN psbN 74838 74969 -1 132 LSC 0.000000 0 0 93 165 no 0.000000 1 0.000000 0.000000 1.000000 25.700000 IGS_078 igs psbN|psbH psbN-psbH 74970 75080 0 111 LSC 0.000858 1 0 225 54 no 0.047619 2 0.500000 0.000858 1.000000 25.200000 psbH gene psbH psbH 75081 75302 1 222 LSC 0.001973 2 0 300 235 no 0.047619 3 0.333333 0.001973 1.000000 36.700000 IGS_079 igs psbH|petB psbH-petB 75303 75422 0 120 LSC 0.000794 1 0 167 115 no 0.047619 2 0.500000 0.000794 1.000000 29.700000 petB gene petB petB 75423 76866 1 1444 LSC 0.002137 20 16 287 7 no 0.666667 15 0.933333 0.002101 0.999307 42.000000 IGS_080 igs petB|petD petB-petD 76867 77109 0 243 LSC 0.006545 6 6 300 300 no 0.095238 6 0.333333 0.006355 1.000000 44.400000 petD gene petD petD 77110 78328 1 1219 LSC 0.001977 10 0 115 153 no 0.285714 10 0.600000 0.001977 1.000000 40.900000 IGS_081 igs petD|rpoA petD-rpoA 78329 78550 0 222 LSC 0.004376 6 0 216 30 no 0.142857 5 0.600000 0.004376 1.000000 29.000000 rpoA gene rpoA rpoA 78551 79570 -1 1020 LSC 0.002680 15 0 68 32 no 0.380952 12 0.666667 0.002680 1.000000 37.600000 IGS_082 igs rpoA|rps11 rpoA-rps11 79571 79646 0 76 LSC 0.006516 1 6 233 24 no 0.047619 6 0.166667 0.006696 0.986842 31.600000 rps11 gene rps11 rps11 79647 80063 -1 417 LSC 0.004659 6 0 43 114 no 0.047619 6 0.166667 0.004659 1.000000 29.200000 IGS_083 igs rps11|rpl36 rps11-rpl36 80064 80202 0 139 LSC 0.004248 2 2 113 6 no 0.095238 6 0.333333 0.004273 1.000000 26.400000 rpl36 gene rpl36 rpl36 80203 80316 -1 114 LSC 0.004177 2 0 24 75 no 0.047619 3 0.333333 0.004177 1.000000 25.500000 IGS_084 igs rpl36|rps8 rpl36-rps8 80317 80778 0 462 LSC 0.010987 27 10 107 300 yes 0.666667 16 0.875000 0.011060 1.000000 57.500000 rps8 gene rps8 rps8 80779 81177 -1 399 LSC 0.000000 0 0 43 24 no 0.000000 1 0.000000 0.000000 1.000000 22.600000 IGS_085 igs rps8|rpl14 rps8-rpl14 81178 81388 0 211 LSC 0.008751 9 9 300 300 no 0.285714 12 0.500000 0.008685 1.000000 53.500000 rpl14 gene rpl14 rpl14 81389 81757 -1 369 LSC 0.000258 1 5 89 63 no 0.095238 3 0.666667 0.000258 1.000000 28.800000 IGS_086 igs rpl14|rpl16 rpl14-rpl16 81758 81900 0 143 LSC 0.007459 4 0 300 52 no 0.047619 4 0.250000 0.007459 1.000000 30.400000 rpl16 gene rpl16 rpl16 81901 83234 -1 1334 LSC 0.003120 25 13 43 81 no 0.666667 17 0.823529 0.003133 0.999250 45.600000 IGS_087 igs rpl16|rps3 rpl16-rps3 83235 83389 0 155 LSC 0.011367 8 0 300 300 no 0.238095 9 0.555556 0.011367 1.000000 49.800000 rps3 gene rps3 rps3 83390 84046 -1 657 LSC 0.003501 11 0 0 120 no 0.285714 10 0.600000 0.003501 1.000000 34.000000 IGS_088 igs rps3|rpl22 rps3-rpl22 84047 84097 0 51 LSC 0.005415 2 2 38 69 no 0.190476 6 0.666667 0.005474 1.000000 37.200000 rpl22 gene rpl22 rpl22 84098 84490 -1 393 LSC 0.004314 11 0 89 9 no 0.333333 9 0.777778 0.004314 1.000000 33.100000 IGS_089 igs rpl22|rps19 rpl22-rps19 84491 84572 0 82 LSC 0.029574 6 22 173 33 no 0.190476 7 0.571429 0.028476 0.792683 45.100000 rps19 gene rps19 rps19 84573 84851 -1 279 IRb 0.002765 3 0 36 245 no 0.047619 4 0.250000 0.002765 1.000000 24.900000 IGS_090 igs rps19|trnH-GUG rps19-trnH-GUG 84852 85018 0 167 IRb 0.000000 0 7 245 78 no 0.000000 3 0.000000 0.000000 0.964072 28.700000 trnH-GUG tRNA trnH-GUG trnH-GUG 85019 85093 1 75 IRb 0.000000 0 0 300 3 no 0.000000 1 0.000000 0.000000 1.000000 19.000000 IGS_091 igs trnH-GUG|rpl2 trnH-GUG-rpl2 85094 85136 0 43 IRb 0.034551 3 0 300 300 yes 0.000000 2 0.000000 0.034551 1.000000 58.000000 rpl2 gene rpl2 rpl2 85137 86559 -1 1423 IRb 0.000415 2 0 13 300 no 0.047619 3 0.333333 0.000415 1.000000 27.200000 IGS_092 igs rpl2|rpl23 rpl2-rpl23 86560 86640 0 81 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rpl23 gene rpl23 rpl23 86641 86922 -1 282 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_093 igs rpl23|trnI-CAU rpl23-trnI-CAU 86923 87087 0 165 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 trnI-CAU tRNA trnI-CAU trnI-CAU 87088 87161 -1 74 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_094 igs trnI-CAU|ycf2 trnI-CAU-ycf2 87162 87252 0 91 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 ycf2 gene ycf2 ycf2 87253 94107 1 6855 IRb 0.001018 29 111 300 278 no 0.619048 15 0.866667 0.001022 1.000000 48.300000 IGS_095 igs ycf2|ycf15 ycf2-ycf15 94108 94223 0 116 IRb 0.000000 0 0 183 162 no 0.000000 1 0.000000 0.000000 1.000000 30.900000 ycf15 gene ycf15 ycf15 94224 94454 1 231 IRb 0.002144 1 0 299 300 no 0.000000 2 0.000000 0.002144 1.000000 35.300000 IGS_096 igs ycf15|trnL-CAA ycf15-trnL-CAA 94455 95143 0 689 IRb 0.000995 3 0 68 300 no 0.095238 4 0.500000 0.000995 1.000000 32.900000 trnL-CAA tRNA trnL-CAA trnL-CAA 95144 95224 -1 81 IRb 0.000000 0 0 300 242 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_097 igs trnL-CAA|ndhB trnL-CAA-ndhB 95225 95779 0 555 IRb 0.001064 2 0 300 300 no 0.047619 3 0.333333 0.001064 1.000000 40.900000 ndhB gene ndhB ndhB 95780 98011 -1 2232 IRb 0.000474 6 0 300 300 no 0.190476 7 0.571429 0.000474 1.000000 42.600000 IGS_098 igs ndhB|rps7 ndhB-rps7 98012 98326 0 315 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 34.100000 rps7 gene rps7 rps7 98327 98794 -1 468 IRb 0.000387 1 0 300 300 no 0.000000 2 0.000000 0.000387 1.000000 37.700000 IGS_099 igs rps7|rps12 rps7-rps12 98795 98852 0 58 IRb 0.001642 1 0 300 300 no 0.047619 2 0.500000 0.001642 1.000000 37.500000 rps12_part2 gene rps12 rps12 98853 99110 -1 258 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_100 igs rps12|trnV-GAC rps12-trnV-GAC 99111 100942 0 1832 IRb 0.000660 6 18 300 300 no 0.190476 9 0.444444 0.000594 0.998908 44.800000 trnV-GAC tRNA trnV-GAC trnV-GAC 100943 101014 1 72 IRb 0.000000 0 0 108 300 no 0.000000 1 0.000000 0.000000 1.000000 26.900000 IGS_101 igs trnV-GAC|rrn16 trnV-GAC-rrn16 101015 101243 0 229 IRb 0.000416 1 0 180 300 no 0.047619 2 0.500000 0.000416 1.000000 33.900000 rrn16 rRNA rrn16 rrn16 101244 102734 1 1491 IRb 0.000128 2 0 300 300 no 0.095238 3 0.666667 0.000128 1.000000 42.000000 IGS_102 igs rrn16|trnI-GAU rrn16-trnI-GAU 102735 103035 0 301 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 trnI-GAU_part1 tRNA trnI-GAU trnI-GAU 103036 103077 1 42 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 ycf68 gene ycf68 ycf68 103177 103564 1 388 IRb 0.000000 0 0 300 32 no 0.000000 1 0.000000 0.000000 1.000000 23.000000 IGS_105 igs ycf68|trnI-GAU ycf68-trnI-GAU 103565 104014 0 450 IRb 0.001460 3 0 300 300 no 0.095238 4 0.500000 0.001460 1.000000 40.200000 trnI-GAU_part2 tRNA trnI-GAU trnI-GAU 104015 104049 1 35 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_106 igs trnI-GAU|trnA-UGC trnI-GAU-trnA-UGC 104050 104113 0 64 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 trnA-UGC_part1 tRNA trnA-UGC trnA-UGC 104114 104151 1 38 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 trnA-UGC_part2 tRNA trnA-UGC trnA-UGC 104958 104992 1 35 IRb 0.000000 0 0 150 93 no 0.000000 1 0.000000 0.000000 1.000000 25.700000 IGS_109 igs trnA-UGC|rrn23 trnA-UGC-rrn23 104993 105138 0 146 IRb 0.003392 1 0 185 300 no 0.000000 2 0.000000 0.003392 1.000000 35.000000 rrn23 rRNA rrn23 rrn23 105139 107950 1 2812 IRb 0.000098 2 0 52 224 no 0.047619 3 0.333333 0.000098 1.000000 27.200000 IGS_110 igs rrn23|rrn4.5 rrn23-rrn4.5 107951 108049 0 99 IRb 0.000000 0 0 300 125 no 0.000000 1 0.000000 0.000000 1.000000 28.100000 rrn4.5 rRNA rrn4.5 rrn4.5 108050 108152 1 103 IRb 0.000000 0 0 300 22 no 0.000000 1 0.000000 0.000000 1.000000 20.400000 IGS_111 igs rrn4.5|rrn5 rrn4.5-rrn5 108153 108375 0 223 IRb 0.007517 5 0 300 300 no 0.095238 4 0.500000 0.007517 1.000000 41.700000 rrn5 rRNA rrn5 rrn5 108376 108496 1 121 IRb 0.000000 0 0 196 300 no 0.000000 1 0.000000 0.000000 1.000000 33.500000 IGS_112 igs rrn5|trnR-ACG rrn5-trnR-ACG 108497 108745 0 249 IRb 0.000000 0 0 300 221 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 trnR-ACG tRNA trnR-ACG trnR-ACG 108746 108819 1 74 IRb 0.000000 0 0 300 147 no 0.000000 1 0.000000 0.000000 1.000000 29.800000 IGS_113 igs trnR-ACG|trnN-GUU trnR-ACG-trnN-GUU 108820 109418 0 599 IRb 0.002767 6 0 300 300 no 0.142857 8 0.375000 0.002767 1.000000 45.200000 trnN-GUU tRNA trnN-GUU trnN-GUU 109419 109490 -1 72 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_114 igs trnN-GUU|ycf1 trnN-GUU-ycf1 109491 109847 0 357 IRb 0.001654 2 0 300 300 no 0.047619 3 0.333333 0.001654 1.000000 37.300000 ycf1 gene ycf1 ycf1 109848 111122 1 1275 IRb 0.000853 9 29 29 4 no 0.333333 10 0.700000 0.000774 1.000000 35.600000 IGS_115 igs ycf1|ndhF ycf1-ndhF 111123 111271 0 149 SSC 0.056288 28 41 300 3 yes 0.476190 14 0.714286 0.050325 0.939597 65.100000 ndhF gene ndhF ndhF 111272 113497 -1 2226 SSC 0.005464 60 0 76 10 yes 0.809524 19 0.894737 0.005464 1.000000 45.200000 IGS_116 igs ndhF|rpl32 ndhF-rpl32 113498 114351 0 854 SSC 0.010079 37 630 167 13 no 0.619048 17 0.764706 0.011637 0.998829 48.400000 rpl32 gene rpl32 rpl32 114352 114373 1 22 SSC 0.018482 2 22 7 33 no 0.095238 4 0.500000 0.018482 1.000000 40.700000 IGS_117 igs rpl32|trnL-UAG rpl32-trnL-UAG 114374 114874 0 501 SSC 0.018501 38 343 8 84 yes 0.619048 16 0.812500 0.017037 0.998004 52.900000 trnL-UAG tRNA trnL-UAG trnL-UAG 114875 114954 1 80 SSC 0.000000 0 0 20 4 no 0.000000 1 0.000000 0.000000 1.000000 19.100000 IGS_118 igs trnL-UAG|ccsA trnL-UAG-ccsA 114955 115038 0 84 SSC 0.020202 6 8 100 184 no 0.285714 11 0.545455 0.018471 1.000000 55.400000 ccsA gene ccsA ccsA 115039 116010 1 972 SSC 0.003469 15 0 5 10 no 0.380952 11 0.727273 0.003469 1.000000 36.000000 IGS_119 igs ccsA|ndhD ccsA-ndhD 116011 116246 0 236 SSC 0.011501 9 0 117 66 no 0.380952 11 0.727273 0.011501 1.000000 40.800000 ndhD gene ndhD ndhD 116247 117749 -1 1503 SSC 0.004664 28 0 74 66 no 0.380952 13 0.615385 0.004664 1.000000 41.500000 IGS_120 igs ndhD|psaC ndhD-psaC 117750 117874 0 125 SSC 0.013638 9 0 98 300 no 0.095238 6 0.333333 0.013638 1.000000 43.000000 psaC gene psaC psaC 117875 118120 -1 246 SSC 0.000387 1 0 58 300 no 0.047619 2 0.500000 0.000387 1.000000 24.700000 IGS_121 igs psaC|ndhE psaC-ndhE 118121 118486 0 366 SSC 0.002836 7 4 300 300 no 0.238095 8 0.625000 0.002842 1.000000 44.600000 ndhE gene ndhE ndhE 118487 118792 -1 306 SSC 0.001556 5 0 27 73 no 0.142857 4 0.750000 0.001556 1.000000 26.300000 IGS_122 igs ndhE|ndhG ndhE-ndhG 118793 118980 0 188 SSC 0.019959 12 4 300 185 yes 0.428571 12 0.750000 0.020032 0.994681 60.100000 ndhG gene ndhG ndhG 118981 119511 -1 531 SSC 0.004394 9 0 17 300 no 0.285714 9 0.666667 0.004394 1.000000 34.300000 IGS_123 igs ndhG|ndhI ndhG-ndhI 119512 119765 0 254 SSC 0.001125 3 4 65 300 no 0.190476 7 0.571429 0.001137 1.000000 31.000000 ndhI gene ndhI ndhI 119766 120308 -1 543 SSC 0.001526 6 0 300 32 no 0.142857 7 0.428571 0.001526 1.000000 31.000000 IGS_124 igs ndhI|ndhA ndhI-ndhA 120309 120398 0 90 SSC 0.009630 4 0 300 158 no 0.142857 5 0.600000 0.009630 1.000000 43.200000 ndhA gene ndhA ndhA 120399 122552 -1 2154 SSC 0.005019 52 18 57 300 no 0.761905 18 0.888889 0.005026 0.998143 48.400000 IGS_125 igs ndhA|ndhH ndhA-ndhH 122553 122553 0 1 SSC 0.000000 0 0 13 300 no 0.000000 1 0.000000 NA 1.000000 19.700000 ndhH gene ndhH ndhH 122554 123735 -1 1182 SSC 0.002812 17 0 14 132 no 0.476190 13 0.769231 0.002812 1.000000 38.000000 IGS_126 igs ndhH|rps15 ndhH-rps15 123736 123860 0 125 SSC 0.002971 3 0 6 7 no 0.095238 4 0.500000 0.002971 1.000000 25.300000 rps15 gene rps15 rps15 123861 124130 -1 270 SSC 0.007090 7 0 131 9 yes 0.142857 8 0.375000 0.007090 1.000000 28.500000 IGS_127 igs rps15|ycf1 rps15-ycf1 124131 128848 0 4718 SSC 0.010072 205 63 79 300 yes 0.904762 20 0.950000 0.009942 1.000000 53.700000 ycf1 gene ycf1 ycf1 128849 130171 -1 1323 IRa 0.000452 4 311 289 29 no 0.142857 5 0.600000 0.000452 0.780801 27.700000 IGS_128 igs ycf1|trnN-GUU ycf1-trnN-GUU 130172 130528 0 357 IRa 0.001654 2 0 300 300 no 0.047619 3 0.333333 0.001654 1.000000 37.300000 trnN-GUU tRNA trnN-GUU trnN-GUU 130529 130600 1 72 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_129 igs trnN-GUU|trnR-ACG trnN-GUU-trnR-ACG 130601 131199 0 599 IRa 0.002767 6 0 300 300 no 0.142857 8 0.375000 0.002767 1.000000 45.200000 trnR-ACG tRNA trnR-ACG trnR-ACG 131200 131273 -1 74 IRa 0.000000 0 0 147 300 no 0.000000 1 0.000000 0.000000 1.000000 29.800000 IGS_130 igs trnR-ACG|rrn5 trnR-ACG-rrn5 131274 131522 0 249 IRa 0.000000 0 0 221 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rrn5 rRNA rrn5 rrn5 131523 131643 -1 121 IRa 0.000000 0 0 300 196 no 0.000000 1 0.000000 0.000000 1.000000 33.500000 IGS_131 igs rrn5|rrn4.5 rrn5-rrn4.5 131644 131866 0 223 IRa 0.007517 5 0 300 300 no 0.095238 4 0.500000 0.007517 1.000000 41.700000 rrn4.5 rRNA rrn4.5 rrn4.5 131867 131969 -1 103 IRa 0.000000 0 0 22 300 no 0.000000 1 0.000000 0.000000 1.000000 20.400000 IGS_132 igs rrn4.5|rrn23 rrn4.5-rrn23 131970 132067 0 98 IRa 0.000000 0 0 125 300 no 0.000000 1 0.000000 0.000000 1.000000 28.100000 rrn23 rRNA rrn23 rrn23 132068 134879 -1 2812 IRa 0.000098 2 0 223 53 no 0.047619 3 0.333333 0.000098 1.000000 27.300000 IGS_133 igs rrn23|trnA-UGC rrn23-trnA-UGC 134880 135026 0 147 IRa 0.003369 1 0 300 185 no 0.000000 2 0.000000 0.003369 1.000000 35.000000 trnA-UGC_part2 tRNA trnA-UGC trnA-UGC 135027 135061 -1 35 IRa 0.000000 0 0 93 150 no 0.000000 1 0.000000 0.000000 1.000000 25.700000 orf57 gene orf57 orf57 135608 135781 1 174 IRa 0.000547 1 0 300 300 no 0.047619 2 0.500000 0.000547 1.000000 35.600000 IGS_136 igs orf57|trnA-UGC orf57-trnA-UGC 135782 135867 0 86 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 trnA-UGC_part1 tRNA trnA-UGC trnA-UGC 135868 135905 -1 38 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_137 igs trnA-UGC|trnI-GAU trnA-UGC-trnI-GAU 135906 135969 0 64 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 trnI-GAU_part2 tRNA trnI-GAU trnI-GAU 135970 136004 -1 35 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 ycf68 gene ycf68 ycf68 136455 136842 -1 388 IRa 0.000000 0 0 32 300 no 0.000000 1 0.000000 0.000000 1.000000 23.000000 IGS_140 igs ycf68|trnI-GAU ycf68-trnI-GAU 136843 136941 0 99 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 trnI-GAU_part1 tRNA trnI-GAU trnI-GAU 136942 136983 -1 42 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_141 igs trnI-GAU|rrn16 trnI-GAU-rrn16 136984 137284 0 301 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rrn16 rRNA rrn16 rrn16 137285 138775 -1 1491 IRa 0.000128 2 0 300 300 no 0.095238 3 0.666667 0.000128 1.000000 42.000000 IGS_142 igs rrn16|trnV-GAC rrn16-trnV-GAC 138776 139004 0 229 IRa 0.000416 1 0 300 180 no 0.047619 2 0.500000 0.000416 1.000000 33.900000 trnV-GAC tRNA trnV-GAC trnV-GAC 139005 139076 -1 72 IRa 0.000000 0 0 300 108 no 0.000000 1 0.000000 0.000000 1.000000 26.900000 IGS_143 igs trnV-GAC|rps12 trnV-GAC-rps12 139077 140908 0 1832 IRa 0.000663 6 18 300 300 no 0.190476 9 0.444444 0.000592 0.998908 44.800000 rps12_part2 gene rps12 rps12 140909 141166 1 258 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_144 igs rps12|rps7 rps12-rps7 141167 141224 0 58 IRa 0.001642 1 0 300 300 no 0.047619 2 0.500000 0.001642 1.000000 37.500000 rps7 gene rps7 rps7 141225 141692 1 468 IRa 0.000387 1 0 300 300 no 0.000000 2 0.000000 0.000387 1.000000 37.700000 IGS_145 igs rps7|ndhB rps7-ndhB 141693 142007 0 315 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 34.100000 ndhB gene ndhB ndhB 142008 144239 1 2232 IRa 0.000474 6 0 300 300 no 0.190476 7 0.571429 0.000474 1.000000 42.600000 IGS_146 igs ndhB|trnL-CAA ndhB-trnL-CAA 144240 144794 0 555 IRa 0.001064 2 0 300 300 no 0.047619 3 0.333333 0.001064 1.000000 40.900000 trnL-CAA tRNA trnL-CAA trnL-CAA 144795 144875 1 81 IRa 0.000000 0 0 242 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_147 igs trnL-CAA|ycf2 trnL-CAA-ycf2 144876 145911 0 1036 IRa 0.001140 4 0 300 183 no 0.095238 4 0.500000 0.001140 1.000000 41.500000 ycf2 gene ycf2 ycf2 145912 152766 -1 6855 IRa 0.001018 29 111 278 300 no 0.619048 15 0.866667 0.001022 1.000000 48.300000 IGS_148 igs ycf2|trnI-CAU ycf2-trnI-CAU 152767 152857 0 91 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 trnI-CAU tRNA trnI-CAU trnI-CAU 152858 152931 1 74 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_149 igs trnI-CAU|rpl23 trnI-CAU-rpl23 152932 153096 0 165 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rpl23 gene rpl23 rpl23 153097 153378 1 282 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_150 igs rpl23|rpl2 rpl23-rpl2 153379 153459 0 81 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rpl2 gene rpl2 rpl2 153460 154882 1 1423 IRa 0.000415 2 0 300 13 no 0.047619 3 0.333333 0.000415 1.000000 27.200000 IGS_151 igs rpl2|trnH-GUG rpl2-trnH-GUG 154883 154925 0 43 IRa 0.034551 3 0 300 300 yes 0.000000 2 0.000000 0.034551 1.000000 58.000000 trnH-GUG tRNA trnH-GUG trnH-GUG 154926 155000 -1 75 IRa 0.000000 0 0 3 300 no 0.000000 1 0.000000 0.000000 1.000000 19.000000 IGS_152 igs trnH-GUG|rps19 trnH-GUG-rps19 155001 155167 0 167 IRa 0.000000 0 7 78 245 no 0.000000 3 0.000000 0.000000 0.964072 28.700000 rps19 gene rps19 rps19 155168 155446 1 279 IRa 0.002870 3 70 245 37 no 0.142857 5 0.600000 0.002673 1.000000 32.300000 IGS_153 igs rps19|psbA rps19-psbA 155447 56 0 92 LSC 0.008596 4 41 33 239 no 0.190476 7 0.571429 0.007807 1.000000 39.000000