primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnH-GUG-psbA_p1 trnH-GUG-psbA 1 GATCCACTTGGCTACATCCG CCTCTAGACCTAGCTGCTGT 20 20 55.0 55.0 58.1 57.9 0.0 13.4 0.194818 131 682 581-619 1.000000 83.0 trnH-GUG-psbA_p2 trnH-GUG-psbA 2 CAATCCACTGCCTTGATCCA CCTCTAGACCTAGCTGCTGT 20 20 50.0 55.0 57.9 57.9 0.0 13.4 0.199180 131 682 595-633 1.000000 82.9 trnH-GUG-psbA_p3 trnH-GUG-psbA 3 AATCCACTGCCTTGATCCAC CCTCTAGACCTAGCTGCTGT 20 20 50.0 55.0 57.9 57.9 0.0 13.4 0.200688 131 682 594-632 1.000000 82.9 trnH-GUG-psbA_p4 trnH-GUG-psbA 4 ACAATCCACTGCCTTGATCC CCTCTAGACCTAGCTGCTGT 20 20 50.0 55.0 57.9 57.9 0.0 13.4 0.200688 131 682 596-634 1.000000 82.9 trnH-GUG-psbA_p5 trnH-GUG-psbA 5 GATCCACTTGGCTACATCCG TTCCCTCTAGACCTAGCTGC 20 20 55.0 55.0 58.1 57.9 0.0 0.0 0.203648 131 682 584-622 1.000000 82.9 psbA-trnK-UUU_p1 psbA-trnK-UUU 1 AAACGACCCCATAGGCTTTC CTATCCGACTAGTTCCGGGT 20 20 50.0 55.0 57.9 58.0 0.0 19.6 0.145823 1745 2178 516-523 1.000000 82.1 psbA-trnK-UUU_p2 psbA-trnK-UUU 2 GAAACGACCCCATAGGCTTT CTATCCGACTAGTTCCGGGT 20 20 50.0 55.0 57.9 58.0 0.0 19.6 0.145823 1745 2178 517-524 1.000000 82.1 psbA-trnK-UUU_p3 psbA-trnK-UUU 3 CCAGTTACAGAAACGACCCC CTATCCGACTAGTTCCGGGT 20 20 55.0 55.0 58.2 58.0 0.0 19.6 0.216945 1745 2178 526-533 1.000000 81.4 psbA-trnK-UUU_p4 psbA-trnK-UUU 4 AAACGACCCCATAGGCTTTC CGGCTTGGAGAGGGATTTTT 20 20 50.0 50.0 57.9 58.2 0.0 0.0 0.284854 1745 2178 568-576 1.000000 80.8 psbA-trnK-UUU_p5 psbA-trnK-UUU 5 GAAACGACCCCATAGGCTTT CGGCTTGGAGAGGGATTTTT 20 20 50.0 50.0 57.9 58.2 0.0 0.0 0.284854 1745 2178 569-577 1.000000 80.8 trnK-UUU_p1 trnK-UUU 1 AGCATTTCATCTGATTTCAATATGA TGATTGTGTGATGCGCTTCA 25 20 28.0 45.0 55.4 58.5 0.0 20.9 8.059219 2179 4818 2769-2777 1.000000 40.7 trnK-UUU_p2 trnK-UUU 2 AGCATTTCATCTGATTTCAATATGA GATTGTGTGATGCGCTTCAA 25 20 28.0 45.0 55.4 57.4 0.0 25.5 8.198049 2179 4818 2768-2776 1.000000 40.7 trnK-UUU_p3 trnK-UUU 3 AGCATTTCATCTGATTTCAATATGA TTGATTGTGTGATGCGCTTC 25 20 28.0 45.0 55.4 57.4 0.0 15.9 8.198049 2179 4818 2770-2778 1.000000 40.7 trnK-UUU_p4 trnK-UUU 4 GCATTTCATCTGATTTCAATATGA TGATTGTGTGATGCGCTTCA 24 20 29.2 45.0 54.1 58.5 0.0 20.9 8.409331 2179 4818 2768-2776 1.000000 40.7 trnK-UUU_p5 trnK-UUU 5 AGCATTTCATCTGATTTCAATATG TGATTGTGTGATGCGCTTCA 24 20 29.2 45.0 54.1 58.5 0.0 20.9 8.422595 2179 4818 2769-2777 1.000000 40.7 rps16-trnQ-UUG_p1 rps16-trnQ-UUG 1 ACGTTGCTTTCTACCCCATC GAAATTCAAATGGGGCGTGG 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.118176 6618 7621 1123-1128 1.000000 80.4 rps16-trnQ-UUG_p2 rps16-trnQ-UUG 2 GTTGCTTTCTACCCCATCGT GAAATTCAAATGGGGCGTGG 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.118176 6618 7621 1121-1126 1.000000 80.4 rps16-trnQ-UUG_p3 rps16-trnQ-UUG 3 AAGTCGCACGTTGCTTTCTA GAAATTCAAATGGGGCGTGG 20 20 45.0 50.0 58.1 58.0 8.1 0.0 0.148076 6618 7621 1130-1135 1.000000 80.2 rps16-trnQ-UUG_p4 rps16-trnQ-UUG 4 ACGTTGCTTTCTACCCCATC GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 57.9 58.1 0.0 16.9 0.185526 6618 7621 1065-1070 1.000000 79.9 rps16-trnQ-UUG_p5 rps16-trnQ-UUG 5 GTTGCTTTCTACCCCATCGT GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 57.9 58.1 0.0 16.9 0.185526 6618 7621 1063-1068 1.000000 79.9 trnS-GCU-trnG-GCC_p1 trnS-GCU-trnG-GCC 1 CAATCCGACGCTTTAGTCCA TTCATCGGAATATGGAGCCG 20 20 50.0 50.0 58.0 57.5 0.0 0.0 0.460256 9079 10011 625-1056 1.000000 81.7 trnS-GCU-trnG-GCC_p2 trnS-GCU-trnG-GCC 2 AATCCGACGCTTTAGTCCAC TTCATCGGAATATGGAGCCG 20 20 50.0 50.0 58.0 57.5 0.0 0.0 0.461644 9079 10011 624-1055 1.000000 81.6 trnS-GCU-trnG-GCC_p3 trnS-GCU-trnG-GCC 3 CAATCCGACGCTTTAGTCCA GAGCCGAGGATCCCTTAACT 20 20 50.0 55.0 58.0 58.6 0.0 8.6 0.589383 9079 10011 611-1042 1.000000 80.6 trnS-GCU-trnG-GCC_p4 trnS-GCU-trnG-GCC 4 AATCCGACGCTTTAGTCCAC GAGCCGAGGATCCCTTAACT 20 20 50.0 55.0 58.0 58.6 0.0 8.6 0.590771 9079 10011 610-1041 1.000000 80.6 trnS-GCU-trnG-GCC_p5 trnS-GCU-trnG-GCC 5 TTCCAAGTCATCACCGGAAC TTCATCGGAATATGGAGCCG 20 20 50.0 50.0 57.8 57.5 9.5 0.0 0.634586 9079 10011 698-1129 1.000000 80.1 trnG-GCC-trnR-UCU_p1 trnG-GCC-trnR-UCU 1 AGCCTTCCAAGCTAACGATG AGAAGACCTCTGTCCTATCCA 20 21 50.0 47.6 58.0 56.9 0.0 0.0 2.081443 10788 11633 868-926 1.000000 68.1 trnG-GCC-trnR-UCU_p2 trnG-GCC-trnR-UCU 2 CCTAGCCTTCCAAGCTAACG AGAAGACCTCTGTCCTATCCA 20 21 55.0 47.6 58.1 56.9 0.0 0.0 2.110280 10788 11633 871-929 1.000000 67.8 trnG-GCC-trnR-UCU_p3 trnG-GCC-trnR-UCU 3 AGCCTTCCAAGCTAACGATG AGGTTTAGAAGACCTCTGTCCT 20 22 50.0 45.5 58.0 57.9 0.0 0.0 2.164771 10788 11633 874-932 1.000000 67.4 trnG-GCC-trnR-UCU_p4 trnG-GCC-trnR-UCU 4 CCTAGCCTTCCAAGCTAACG AGGTTTAGAAGACCTCTGTCCT 20 22 55.0 45.5 58.1 57.9 0.0 0.0 2.193608 10788 11633 877-935 1.000000 67.2 trnG-GCC-trnR-UCU_p5 trnG-GCC-trnR-UCU 5 CCCTAGCCTTCCAAGCTAAC AGAAGACCTCTGTCCTATCCA 20 21 55.0 47.6 57.7 56.9 0.0 0.0 2.385293 10788 11633 872-930 1.000000 65.6 trnE-UUC-trnT-GGU_p1 trnE-UUC-trnT-GGU 1 TTCCGTAATACCCTACCCCC GAACCGATGACTTACGCCTT 20 20 55.0 50.0 57.9 58.0 0.0 0.0 0.107610 34052 36689 2779-2779 0.500000 59.1 trnE-UUC-trnT-GGU_p2 trnE-UUC-trnT-GGU 2 TTCCGTAATACCCTACCCCC CCATGGCGTTACTCTACCAC 20 20 55.0 55.0 57.9 58.1 0.0 0.0 0.165707 34052 36689 2758-2758 0.500000 58.7 trnE-UUC-trnT-GGU_p3 trnE-UUC-trnT-GGU 3 TTCCGTAATACCCTACCCCC TGGCGTTACTCTACCACTGA 20 20 55.0 50.0 57.9 58.1 0.0 0.0 0.187862 34052 36689 2755-2755 0.500000 58.5 trnE-UUC-trnT-GGU_p4 trnE-UUC-trnT-GGU 4 TTCCGTAATACCCTACCCCC CCGATGACTTACGCCTTACC 20 20 55.0 55.0 57.9 58.2 0.0 0.0 0.252543 34052 36689 2776-2776 0.500000 58.0 trnE-UUC-trnT-GGU_p5 trnE-UUC-trnT-GGU 5 GCTGCCTCCTTGAAAGAGAG GAACCGATGACTTACGCCTT 20 20 55.0 50.0 58.3 58.0 0.0 0.0 0.269359 34052 36689 2741-2741 0.500000 57.8 psbC-trnS-UGA_p1 psbC-trnS-UGA 1 AGCTGCAGCAGGATTTGAAA GGTTGATAGCTCCGGTCTTG 20 20 45.0 55.0 58.4 58.1 38.2 0.0 0.434339 40929 41166 385-385 1.000000 78.0 psbC-trnS-UGA_p2 psbC-trnS-UGA 2 TAGGTCATTTATGGCACGCG GGTTGATAGCTCCGGTCTTG 20 20 50.0 55.0 58.4 58.1 3.5 0.0 0.481207 40929 41166 419-419 1.000000 77.5 psbC-trnS-UGA_p3 psbC-trnS-UGA 3 GCTGCAGCAGGATTTGAAAA GGTTGATAGCTCCGGTCTTG 20 20 45.0 55.0 57.6 58.1 33.4 0.0 0.502562 40929 41166 384-384 1.000000 77.4 psbC-trnS-UGA_p4 psbC-trnS-UGA 4 AGCTGCAGCAGGATTTGAAA GATGGCCGAGTGGTTGATAG 20 20 45.0 55.0 58.4 58.1 38.2 0.0 0.504584 40929 41166 396-396 1.000000 77.4 psbC-trnS-UGA_p5 psbC-trnS-UGA 5 TAGGTCATTTATGGCACGCG GATGGCCGAGTGGTTGATAG 20 20 50.0 55.0 58.4 58.1 3.5 0.0 0.551451 40929 41166 430-430 1.000000 76.9 psbZ-trnG-UCC_p1 psbZ-trnG-UCC 1 CCGGTACATCATTATGGATTGGA CGTCTTCTCCTTGGCAAAGA 23 20 43.5 50.0 58.1 57.8 0.0 1.1 3.264404 41808 42425 711-730 1.000000 59.0 psbZ-trnG-UCC_p2 psbZ-trnG-UCC 2 TCCGGTACATCATTATGGATTGG CGTCTTCTCCTTGGCAAAGA 23 20 43.5 50.0 58.1 57.8 0.0 1.1 3.264404 41808 42425 712-731 1.000000 59.0 psbZ-trnG-UCC_p3 psbZ-trnG-UCC 3 CCGGTACATCATTATGGATTGG CGTCTTCTCCTTGGCAAAGA 22 20 45.5 50.0 56.7 57.8 0.0 1.1 3.467182 41808 42425 711-730 1.000000 57.4 psbZ-trnG-UCC_p4 psbZ-trnG-UCC 4 CCGGTACATCATTATGGATTGGA CGGATAGCGGGAATCGAAC 23 19 43.5 57.9 58.1 58.2 0.0 0.0 4.284085 41808 42425 733-752 1.000000 50.8 psbZ-trnG-UCC_p5 psbZ-trnG-UCC 5 TCCGGTACATCATTATGGATTGG CGGATAGCGGGAATCGAAC 23 19 43.5 57.9 58.1 58.2 0.0 0.0 4.284085 41808 42425 734-753 1.000000 50.8 trnG-UCC-trnfM-CAU_p1 trnG-UCC-trnfM-CAU 1 TCTTTGCCAAGGAGAAGACG AACCTTGAAGTCACGGGTTC 20 20 50.0 50.0 57.8 58.0 0.0 8.5 0.206660 42497 42696 273-281 1.000000 81.5 trnG-UCC-trnfM-CAU_p2 trnG-UCC-trnfM-CAU 2 TCTTTGCCAAGGAGAAGACG CCTTGAAGTCACGGGTTCAA 20 20 50.0 50.0 57.8 58.0 0.0 3.7 0.208039 42497 42696 271-279 1.000000 81.5 trnG-UCC-trnfM-CAU_p3 trnG-UCC-trnfM-CAU 3 TCTTTGCCAAGGAGAAGACG AAGTCACGGGTTCAAATCCC 20 20 50.0 50.0 57.8 58.1 0.0 0.0 0.264195 42497 42696 266-274 1.000000 81.1 trnG-UCC-trnfM-CAU_p4 trnG-UCC-trnfM-CAU 4 TCTTTGCCAAGGAGAAGACG CTCTTCATTACGCGGGGTAG 20 20 50.0 55.0 57.8 57.9 0.0 12.5 0.305497 42497 42696 320-328 1.000000 80.3 trnG-UCC-trnfM-CAU_p5 trnG-UCC-trnfM-CAU 5 TCTTTGCCAAGGAGAAGACG CTTCATTACGCGGGGTAGAG 20 20 50.0 55.0 57.8 57.9 0.0 12.5 0.305497 42497 42696 318-326 1.000000 80.3 psaA-ycf3_p1 psaA-ycf3 1 GCCCATTCCTCGAAAGAAGT ATCAAGCCGCAGAGTATTGG 20 20 50.0 50.0 57.9 58.0 4.1 0.0 0.156301 47843 48634 940-970 1.000000 81.7 psaA-ycf3_p2 psaA-ycf3 2 GCCCATTCCTCGAAAGAAGT AGCGCAGAATTGGTTGAAGA 20 20 50.0 45.0 57.9 58.1 4.1 11.5 0.219123 47843 48634 882-912 1.000000 81.4 psaA-ycf3_p3 psaA-ycf3 3 GCCCATTCCTCGAAAGAAGT CGATCAAGCCGCAGAGTATT 20 20 50.0 50.0 57.9 58.1 4.1 0.0 0.257251 47843 48634 942-972 1.000000 80.9 psaA-ycf3_p4 psaA-ycf3 4 GCCCATTCCTCGAAAGAAGT AGCCGCAGAGTATTGGAAAC 20 20 50.0 50.0 57.9 58.3 4.1 0.0 0.376276 47843 48634 936-966 1.000000 79.9 psaA-ycf3_p5 psaA-ycf3 5 GCCCATTCCTCGAAAGAAGT CAAGCCGCAGAGTATTGGAA 20 20 50.0 50.0 57.9 58.3 4.1 0.0 0.377504 47843 48634 938-968 1.000000 79.9 ndhC-trnV-UAC_p1 ndhC-trnV-UAC 1 GCCCTTTGCTAATTGGGGAT GAACGAGCCCAATGCAAAAA 20 20 50.0 45.0 58.2 57.9 7.7 0.0 0.354022 56416 57220 1037-1246 1.000000 81.1 ndhC-trnV-UAC_p2 ndhC-trnV-UAC 2 GCCCTTTGCTAATTGGGGAT AGAAGGTCTACGGTTCGAGT 20 20 50.0 50.0 58.2 57.8 7.7 0.0 0.403869 56416 57220 950-1159 1.000000 81.0 ndhC-trnV-UAC_p3 ndhC-trnV-UAC 3 GCCCTTTGCTAATTGGGGAT GAAGGTCTACGGTTCGAGTC 20 20 50.0 55.0 58.2 57.5 7.7 0.0 0.747641 56416 57220 949-1158 1.000000 78.3 ndhC-trnV-UAC_p4 ndhC-trnV-UAC 4 GCCCTTTGCTAATTGGGGAT GTTCGAGTCCGTATAGCCCT 20 20 50.0 55.0 58.2 58.7 7.7 0.0 0.889935 56416 57220 938-1147 1.000000 77.2 ndhC-trnV-UAC_p5 ndhC-trnV-UAC 5 GCCCTTTGCTAATTGGGGAT AAGGTCTACGGTTCGAGTCC 20 20 50.0 55.0 58.2 58.8 7.7 0.0 1.034411 56416 57220 948-1157 1.000000 76.0 trnV-UAC_p1 trnV-UAC 1 ACATGATGGACTCCCTTGAA AGCAATACCGATCAAAGAGA 20 20 45.0 40.0 56.1 54.2 0.0 0.0 5.708190 57845 57883 185-186 1.000000 40.4 trnV-UAC_p2 trnV-UAC 2 ACATGATGGACTCCCTTGAA AAGCAATACCGATCAAAGAGA 20 21 45.0 38.1 56.1 55.0 0.0 0.0 5.848182 57845 57883 186-187 1.000000 40.4 trnV-UAC_p3 trnV-UAC 3 ACATGATGGACTCCCTTGAAA AGCAATACCGATCAAAGAGA 21 20 42.9 40.0 56.9 54.2 0.0 0.0 5.926806 57845 57883 185-186 1.000000 40.4 trnV-UAC_p4 trnV-UAC 4 AGGCTATTGTTCTCTTGTTCCC AGCAATACCGATCAAAGAGA 22 20 45.5 40.0 58.0 54.2 0.0 0.0 5.873459 57845 57883 254-255 1.000000 40.3 trnV-UAC_p5 trnV-UAC 5 GGCTATTGTTCTCTTGTTCCCT AGCAATACCGATCAAAGAGA 22 20 45.5 40.0 58.0 54.2 0.0 0.0 5.873459 57845 57883 253-254 1.000000 40.3 accD-psaI_p1 accD-psaI 1 TCCGTTAAAAGGCGTTCTGA AAAGAAGCCATCGCAATTGC 20 20 45.0 45.0 57.5 58.0 0.0 20.8 0.530210 64807 66381 1474-1734 1.000000 81.6 accD-psaI_p2 accD-psaI 2 TCCGTTAAAAGGCGTTCTGA TTGCCGGAAATACTAAGCCC 20 20 45.0 50.0 57.5 58.0 0.0 5.0 0.576782 64807 66381 1458-1718 1.000000 81.2 accD-psaI_p3 accD-psaI 3 TCCGTTAAAAGGCGTTCTGA AAGGCACAAAAATGGAGGGT 20 20 45.0 45.0 57.5 57.9 0.0 0.0 0.631420 64807 66381 1434-1694 1.000000 80.8 accD-psaI_p4 accD-psaI 4 TGAGTTACTTCAGCTCCACG AAAGAAGCCATCGCAATTGC 20 20 50.0 45.0 57.3 58.0 0.0 20.8 0.725406 64807 66381 1453-1713 1.000000 80.0 accD-psaI_p5 accD-psaI 5 TGAGTTACTTCAGCTCCACG TTGCCGGAAATACTAAGCCC 20 20 50.0 50.0 57.3 58.0 0.0 5.0 0.771979 64807 66381 1437-1697 1.000000 79.7 rpl16-rps3_p1 rpl16-rps3 1 GTCGTCCCGCTTCTATTTGT TCCTTTACAAACCATTCGAGCT 20 22 50.0 40.9 58.0 58.0 0.0 0.0 2.021843 90359 91826 1676-1683 1.000000 66.0 rpl16-rps3_p2 rpl16-rps3 2 GTCGTCCCGCTTCTATTTGT GGTAGGGTTCCTTTACAAACCA 20 22 50.0 45.5 58.0 57.9 0.0 6.6 2.108984 90359 91826 1684-1691 1.000000 65.3 rpl16-rps3_p3 rpl16-rps3 3 GTCGTCCCGCTTCTATTTGT GAGGGTAGGGTTCCTTTACA 20 20 50.0 50.0 58.0 55.8 0.0 0.0 2.163634 90359 91826 1687-1694 1.000000 64.8 rpl16-rps3_p4 rpl16-rps3 4 GTCGTCCCGCTTCTATTTGT GGGTTCCTTTACAAACCATTCG 20 22 50.0 45.5 58.0 57.8 0.0 6.6 2.174893 90359 91826 1680-1687 1.000000 64.7 rpl16-rps3_p5 rpl16-rps3 5 TCGTCCCGCTTCTATTTGTC TCCTTTACAAACCATTCGAGCT 20 22 50.0 40.9 57.7 58.0 0.0 0.0 2.304833 90359 91826 1675-1682 1.000000 63.7 ycf1-ndhF_p1 ycf1-ndhF 1 ACGGAAGAAAGGGAGGAAGA GCGGTCGCATCTCTTCTTAT 20 20 50.0 50.0 58.0 57.9 0.0 10.7 0.167171 120131 121307 1527-1871 1.000000 87.1 ycf1-ndhF_p2 ycf1-ndhF 2 CGGAAGAAAAGGAGGATCGG GCGGTCGCATCTCTTCTTAT 20 20 55.0 50.0 58.1 57.9 0.0 10.7 0.200210 120131 121307 1421-1765 1.000000 87.1 ycf1-ndhF_p3 ycf1-ndhF 3 ACGGAAGAAAGGGAGGAAGA AATATGTAGGAAGCGGTCGC 20 20 50.0 50.0 58.0 57.8 0.0 7.3 0.176033 120131 121307 1539-1883 1.000000 87.0 ycf1-ndhF_p4 ycf1-ndhF 4 GCAGAATACCGTCACCCATT GCGGTCGCATCTCTTCTTAT 20 20 50.0 50.0 58.0 57.9 0.0 10.7 0.179922 120131 121307 1577-1921 1.000000 86.9 ycf1-ndhF_p5 ycf1-ndhF 5 GCAGAATACCGTCACCCATT AATATGTAGGAAGCGGTCGC 20 20 50.0 50.0 58.0 57.8 0.0 7.3 0.188784 120131 121307 1589-1933 1.000000 86.8