primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnD-GUC-trnY-GUA_p1 trnD-GUC-trnY-GUA 1 CTTGGGGATGAATTGCTGGT AATTGATTCGTCCTGGGTCG 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.167547 22455 22908 665-683 1.000000 80.2 trnD-GUC-trnY-GUA_p2 trnD-GUC-trnY-GUA 2 TCCTTGGGGATGAATTGCTG AATTGATTCGTCCTGGGTCG 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.172621 22455 22908 667-685 1.000000 80.2 trnD-GUC-trnY-GUA_p3 trnD-GUC-trnY-GUA 3 TGTGTTATTGGATCCGTCGG AATTGATTCGTCCTGGGTCG 20 20 50.0 50.0 57.7 58.0 4.4 0.0 0.327339 22455 22908 642-660 1.000000 79.0 trnD-GUC-trnY-GUA_p4 trnD-GUC-trnY-GUA 4 TGGGGATGAATTGCTGGTTT AATTGATTCGTCCTGGGTCG 20 20 45.0 50.0 57.7 58.0 0.0 0.0 0.348174 22455 22908 663-681 1.000000 78.8 trnD-GUC-trnY-GUA_p5 trnD-GUC-trnY-GUA 5 TTGGGGATGAATTGCTGGTT AATTGATTCGTCCTGGGTCG 20 20 45.0 50.0 57.7 58.0 0.0 0.0 0.348174 22455 22908 664-682 1.000000 78.8 trnE-UUC-psbD_p1 trnE-UUC-psbD 1 CGTAGTATCCTACCCCCAGG GAAACGGTCCCTACGTAACC 20 20 60.0 55.0 58.1 58.0 0.0 5.0 0.083098 23125 25655 2593-2698 1.000000 84.0 trnE-UUC-psbD_p2 trnE-UUC-psbD 2 GCTGCCTCCTTGAAAGAGAG GAAACGGTCCCTACGTAACC 20 20 55.0 55.0 58.3 58.0 0.0 5.0 0.267097 23125 25655 2558-2663 1.000000 82.6 trnE-UUC-psbD_p3 trnE-UUC-psbD 3 TGTCCTGAACCACTAGACGA GAAACGGTCCCTACGTAACC 20 20 50.0 55.0 57.7 58.0 0.0 5.0 0.285247 23125 25655 2537-2642 1.000000 82.5 trnE-UUC-psbD_p4 trnE-UUC-psbD 4 CGTAGTATCCTACCCCCAGG ACAAAAACGAAACGGTCCCT 20 20 60.0 45.0 58.1 58.2 0.0 0.0 0.325459 23125 25655 2601-2706 1.000000 82.0 trnE-UUC-psbD_p5 trnE-UUC-psbD 5 CGTAGTATCCTACCCCCAGG GACCGGACCAACCTACAAAA 20 20 60.0 50.0 58.1 57.7 0.0 9.5 0.338656 23125 25655 2615-2720 1.000000 81.9 psbZ-trnG-UCC_p1 psbZ-trnG-UCC 1 CTTCTCCTGATGGTTGGGTG CGTCTTCTCCTTGGCAAAGA 20 20 55.0 50.0 57.9 57.8 0.0 1.1 0.289634 28955 29685 856-889 1.000000 82.9 psbZ-trnG-UCC_p2 psbZ-trnG-UCC 2 CCCGTTGTTTTTGCTTCTCC CGTCTTCTCCTTGGCAAAGA 20 20 50.0 50.0 57.9 57.8 0.0 1.1 0.304034 28955 29685 869-902 1.000000 82.7 psbZ-trnG-UCC_p3 psbZ-trnG-UCC 3 TTGCTTCTCCTGATGGTTGG CGTCTTCTCCTTGGCAAAGA 20 20 50.0 50.0 57.8 57.8 0.0 1.1 0.374855 28955 29685 859-892 1.000000 82.2 psbZ-trnG-UCC_p4 psbZ-trnG-UCC 4 TTCTCCTGATGGTTGGGTGA CGTCTTCTCCTTGGCAAAGA 20 20 50.0 50.0 58.3 57.8 0.0 1.1 0.428804 28955 29685 855-888 1.000000 81.8 psbZ-trnG-UCC_p5 psbZ-trnG-UCC 5 CTTCTCCTGATGGTTGGGTG TAAATACATTGCCTGGGCGG 20 20 55.0 50.0 57.9 58.3 0.0 7.1 0.433447 28955 29685 895-928 1.000000 81.7 rps4-trnT-UGU_p1 rps4-trnT-UGU 1 AGTTAGTCCCGGTAAAGCCC AGTATTTGAGCCCGCTTAGC 20 20 55.0 50.0 59.1 58.0 0.0 0.0 1.137587 39629 40213 692-744 1.000000 78.1 rps4-trnT-UGU_p2 rps4-trnT-UGU 2 AGTTAGTCCCGGTAAAGCCC GTATTTGAGCCCGCTTAGCT 20 20 55.0 50.0 59.1 58.0 0.0 1.8 1.137587 39629 40213 691-743 1.000000 78.1 rps4-trnT-UGU_p3 rps4-trnT-UGU 3 CCCCAGACGGCGTATTTTT AGTATTTGAGCCCGCTTAGC 19 20 52.6 50.0 58.1 58.0 14.7 0.0 1.182335 39629 40213 674-726 1.000000 77.8 rps4-trnT-UGU_p4 rps4-trnT-UGU 4 CCCCAGACGGCGTATTTTT GTATTTGAGCCCGCTTAGCT 19 20 52.6 50.0 58.1 58.0 14.7 1.8 1.182335 39629 40213 673-725 1.000000 77.8 rps4-trnT-UGU_p5 rps4-trnT-UGU 5 AGTTAGTCCCGGTAAAGCCC CTCAGAGGTTAGAGCATCGC 20 20 55.0 55.0 59.1 57.9 0.0 0.0 1.225254 39629 40213 673-725 1.000000 77.5 trnT-UGU-trnL-UAA_p1 trnT-UGU-trnL-UAA 1 GCGATGCTCTAACCTCTGAG ACCAATTTCGCCATATCCCC 20 20 55.0 50.0 57.9 58.0 0.0 0.0 0.137364 40287 41271 1035-1058 1.000000 80.7 trnT-UGU-trnL-UAA_p2 trnT-UGU-trnL-UAA 2 GCGATGCTCTAACCTCTGAG TAGCGTCTACCAATTTCGCC 20 20 55.0 50.0 57.9 58.1 0.0 0.0 0.202173 40287 41271 1043-1066 1.000000 80.1 trnT-UGU-trnL-UAA_p3 trnT-UGU-trnL-UAA 3 AAGAAATAGGGAAAGCCGGC ACCAATTTCGCCATATCCCC 20 20 50.0 50.0 58.2 58.0 21.9 0.0 0.240656 40287 41271 1091-1114 1.000000 79.8 trnT-UGU-trnL-UAA_p4 trnT-UGU-trnL-UAA 4 GGAATCGAACCGATGACCAT ACCAATTTCGCCATATCCCC 20 20 50.0 50.0 57.8 58.0 15.5 0.0 0.245117 40287 41271 1067-1090 1.000000 79.8 trnT-UGU-trnL-UAA_p5 trnT-UGU-trnL-UAA 5 AAGAAATAGGGAAAGCCGGC TAGCGTCTACCAATTTCGCC 20 20 50.0 50.0 58.2 58.1 21.9 0.0 0.305465 40287 41271 1099-1122 1.000000 79.2 accD_p1 accD 1 TCAGAGGAAAGGGGGAAACT TCGAATTTGCTTTCCTGGGA 20 20 50.0 45.0 57.9 57.4 0.0 0.0 0.711464 51554 53188 1691-1814 1.000000 81.4 accD_p2 accD 2 TCAGAGGAAAGGGGGAAACT TCGAATTTGCTTTCCTGGGAA 20 21 50.0 42.9 57.9 58.1 0.0 0.0 1.263683 51554 53188 1691-1814 1.000000 77.0 accD_p3 accD 3 TCAGAGGAAAGGGGGAAACT TTCGAATTTGCTTTCCTGGGA 20 21 50.0 42.9 57.9 58.1 0.0 0.0 1.263683 51554 53188 1692-1815 1.000000 77.0 accD_p4 accD 4 TCAGAGGAAAGGGGGAAACT CGAATTTGCTTTCCTGGGAAG 20 21 50.0 47.6 57.9 57.8 0.0 10.6 1.355822 51554 53188 1690-1813 1.000000 76.2 accD_p5 accD 5 TCAGAGGAAAGGGGGAAACT CGAATTTGCTTTCCTGGGAA 20 20 50.0 45.0 57.9 56.6 0.0 0.0 1.528241 51554 53188 1690-1813 1.000000 74.8 petA-psbJ_p1 petA-psbJ 1 ACGTTTACAAGGCCTTTTCCT TATTCTGGGTTGGGTTCGTC 21 20 42.9 50.0 58.1 57.2 17.6 0.0 1.833834 57448 58381 1055-1092 1.000000 69.7 petA-psbJ_p2 petA-psbJ 2 ACGTTTACAAGGCCTTTTCCT CATATTCTGGGTTGGGTTCGT 21 21 42.9 47.6 58.1 58.0 17.6 0.0 2.060510 57448 58381 1057-1094 1.000000 67.9 petA-psbJ_p3 petA-psbJ 3 ACAAGGCCTTTTCCTCTTCT TATTCTGGGTTGGGTTCGTC 20 20 45.0 50.0 56.6 57.2 17.6 0.0 2.131730 57448 58381 1049-1086 1.000000 67.4 petA-psbJ_p4 petA-psbJ 4 ACGTTTACAAGGCCTTTTCC TATTCTGGGTTGGGTTCGTC 20 20 45.0 50.0 56.5 57.2 17.6 0.0 2.232037 57448 58381 1055-1092 1.000000 66.5 petA-psbJ_p5 petA-psbJ 5 ACGTTTACAAGGCCTTTTCCT ACGTTAGCTGGTATTCCTGTG 21 21 42.9 47.6 58.1 57.8 17.6 0.0 2.306847 57448 58381 1109-1146 1.000000 65.7 psbE-petL_p1 psbE-petL 1 CAACCCGCAATGAATAGGGA AGTCGTATCTTACTCAGACCGA 20 22 50.0 45.5 57.9 57.9 6.4 0.0 2.185713 59175 60293 1232-1325 1.000000 67.1 psbE-petL_p2 psbE-petL 2 AGAACGTTCTCCTGTGCTTC AGTCGTATCTTACTCAGACCGA 20 22 50.0 45.5 57.8 57.9 24.9 0.0 2.290722 59175 60293 1155-1248 1.000000 66.3 psbE-petL_p3 psbE-petL 3 ACGAATAACCAACCCGCAAT AGTCGTATCTTACTCAGACCGA 20 22 45.0 45.5 58.2 57.9 0.0 0.0 2.305400 59175 60293 1241-1334 1.000000 66.1 psbE-petL_p4 psbE-petL 4 TGCTGACGAATAACCAACCC AGTCGTATCTTACTCAGACCGA 20 22 50.0 45.5 58.2 57.9 0.0 0.0 2.318305 59175 60293 1246-1339 1.000000 66.0 psbE-petL_p5 psbE-petL 5 CGAATAACCAACCCGCAATG AGTCGTATCTTACTCAGACCGA 20 22 50.0 45.5 57.8 57.9 0.0 0.0 2.321730 59175 60293 1240-1333 1.000000 66.0 psaJ-rpl33_p1 psaJ-rpl33 1 CGTAGCACCGGTACTAAGTG TCTGGAAATGCCCGTTGATT 20 20 55.0 45.0 57.8 57.8 16.3 0.0 0.398761 61745 62232 693-713 1.000000 78.3 psaJ-rpl33_p2 psaJ-rpl33 2 CGTAGCACCGGTACTAAGTG ATCTGGAAATGCCCGTTGAT 20 20 55.0 45.0 57.8 57.6 16.3 0.0 0.626621 61745 62232 694-714 1.000000 76.5 psaJ-rpl33_p3 psaJ-rpl33 3 CCAGATGCGTTGACATTTCC TCTGGAAATGCCCGTTGATT 20 20 50.0 45.0 57.5 57.8 0.0 0.0 0.764009 61745 62232 620-640 1.000000 75.5 psaJ-rpl33_p4 psaJ-rpl33 4 CCAGATGCGTTGACATTTCC ATCTGGAAATGCCCGTTGAT 20 20 50.0 45.0 57.5 57.6 0.0 0.0 0.991870 61745 62232 621-641 1.000000 73.7 psaJ-rpl33_p5 psaJ-rpl33 5 CCGTAGCACCGGTACTAAGT TCTGGAAATGCCCGTTGATT 20 20 55.0 45.0 58.9 57.8 21.6 0.0 1.116326 61745 62232 694-714 1.000000 72.6 rpl33-rps18_p1 rpl33-rps18 1 ACATACAATTCACGGGGAGA GCAAACGCCTACGAAAAGAT 20 20 45.0 45.0 56.2 57.1 0.0 0.0 2.654895 62434 63067 657-723 1.000000 68.7 rpl33-rps18_p2 rpl33-rps18 2 AACATACAATTCACGGGGAGA GCAAACGCCTACGAAAAGAT 21 20 42.9 45.0 57.0 57.1 0.0 0.0 2.887250 62434 63067 658-724 1.000000 66.8 rpl33-rps18_p3 rpl33-rps18 3 ACATACAATTCACGGGGAGA GGCAAACGCCTACGAAAAGA 20 20 45.0 50.0 56.2 59.1 0.0 0.0 2.890859 62434 63067 658-724 1.000000 66.8 rpl33-rps18_p4 rpl33-rps18 4 ACATACAATTCACGGGGAGA AATTTGATCCCCCGATTGGA 20 20 45.0 45.0 56.2 56.9 0.0 0.0 2.903903 62434 63067 683-749 1.000000 66.5 rpl33-rps18_p5 rpl33-rps18 5 ACATACAATTCACGGGGAGA CAATTTGATCCCCCGATTGG 20 20 45.0 50.0 56.2 56.8 0.0 0.0 2.944898 62434 63067 684-750 1.000000 66.1 rps12-clpP_p1 rps12-clpP 1 TGCACCAACGGAAACCATAA AACGTATGGCATTCCCTCAC 20 20 45.0 50.0 58.0 58.0 0.0 4.8 0.055727 64881 65086 721-735 1.000000 85.0 rps12-clpP_p2 rps12-clpP 2 TTGCACCAACGGAAACCATA AACGTATGGCATTCCCTCAC 20 20 45.0 50.0 58.0 58.0 0.0 4.8 0.055727 64881 65086 722-736 1.000000 85.0 rps12-clpP_p3 rps12-clpP 3 TGCACCAACGGAAACCATAA CTGGGTGATAGCCTGGGATA 20 20 45.0 55.0 58.0 58.0 0.0 0.0 0.047367 64881 65086 572-572 0.166667 46.3 rps12-clpP_p4 rps12-clpP 4 TTGCACCAACGGAAACCATA CTGGGTGATAGCCTGGGATA 20 20 45.0 55.0 58.0 58.0 0.0 0.0 0.047367 64881 65086 573-573 0.166667 46.3 rps12-clpP_p5 rps12-clpP 5 GATTGGCTGTCTTGCGTTTC CTGGGTGATAGCCTGGGATA 20 20 50.0 55.0 58.0 58.0 0.0 0.0 0.060924 64881 65086 342-342 0.166667 46.2 clpP_p1 clpP 1 TGCACCAACGGAAACCATAA TGTTACGCTTCCACGTCAAA 20 20 45.0 45.0 58.0 58.1 0.0 0.0 0.080062 65087 66503 1936-1952 1.000000 83.5 clpP_p2 clpP 2 GATTGGCTGTCTTGCGTTTC TCCAAAAACCCGGATTCGTT 20 20 50.0 45.0 58.0 58.0 0.0 0.7 0.046831 65087 66503 2346-2456 1.000000 83.3 clpP_p3 clpP 3 TGCACCAACGGAAACCATAA TCCAAAAACCCGGATTCGTT 20 20 45.0 45.0 58.0 58.0 0.0 0.7 0.033274 65087 66503 2576-2686 1.000000 83.2 clpP_p4 clpP 4 TTGCACCAACGGAAACCATA TCCAAAAACCCGGATTCGTT 20 20 45.0 45.0 58.0 58.0 0.0 0.7 0.033274 65087 66503 2577-2687 1.000000 83.2 clpP_p5 clpP 5 TGCACCAACGGAAACCATAA TTGTTACGCTTCCACGTCAA 20 20 45.0 45.0 58.0 58.1 0.0 0.0 0.080062 65087 66503 1940-1953 0.666667 68.8 petB_p1 petB 1 GCCCAGTCTGTTTTGGTAGT ACTATTGGCTGTTCCTCCCC 20 20 50.0 55.0 57.7 59.1 0.0 0.0 1.352234 69379 70836 1569-1589 1.000000 70.5 petB_p2 petB 2 GCCCAGTCTGTTTTGGTAGT GCTGTTCCTCCCCCAAGTAA 20 20 50.0 55.0 57.7 59.3 0.0 0.0 1.575443 69379 70836 1562-1582 1.000000 68.7 petB_p3 petB 3 AGCCCAGTCTGTTTTGGTAG ACTATTGGCTGTTCCTCCCC 20 20 50.0 55.0 57.4 59.1 0.0 0.0 1.648913 69379 70836 1570-1590 1.000000 68.1 petB_p4 petB 4 TGTTTTGGTAGTTCGACCGT ACTATTGGCTGTTCCTCCCC 20 20 45.0 55.0 57.4 59.1 0.0 0.0 1.680760 69379 70836 1561-1581 1.000000 67.9 petB_p5 petB 5 GCCCAGTCTGTTTTGGTAGT CTGTTCCTCCCCCAAGTAAT 20 20 50.0 50.0 57.7 56.5 0.0 0.0 1.772970 69379 70836 1561-1581 1.000000 67.1 trnN-GUU-ycf1_p1 trnN-GUU-ycf1 1 ATAGCGCAGAACAGAATGGG GAGCTCGGAGAAGGAAGAGA 20 20 50.0 55.0 58.0 58.2 11.5 9.7 0.283276 101541 102035 688-949 1.000000 84.4 trnN-GUU-ycf1_p2 trnN-GUU-ycf1 2 TCGGGAGAATCGATGACTGA GAGCTCGGAGAAGGAAGAGA 20 20 50.0 55.0 57.9 58.2 0.0 9.7 0.295100 101541 102035 834-1095 1.000000 83.9 trnN-GUU-ycf1_p3 trnN-GUU-ycf1 3 AGCTATGTAACTTGGGCGTG GAGCTCGGAGAAGGAAGAGA 20 20 50.0 55.0 58.0 58.2 0.0 9.7 0.266493 101541 102035 1095-1346 1.000000 83.8 trnN-GUU-ycf1_p4 trnN-GUU-ycf1 4 TTTTGGTTTTACGCCCCGTA GAGCTCGGAGAAGGAAGAGA 20 20 45.0 55.0 58.0 58.2 0.0 9.7 0.269446 101541 102035 972-1232 1.000000 83.8 trnN-GUU-ycf1_p5 trnN-GUU-ycf1 5 GGCAGAATAGCAGAGCAAGT GAGCTCGGAGAAGGAAGAGA 20 20 50.0 55.0 58.0 58.2 0.0 9.7 0.277848 101541 102035 931-1191 1.000000 83.8 ycf1_p1 ycf1 1 TCAATCTATTATGCGCCGCT CCAAAAGTTGCCAAACTGGG 20 20 45.0 50.0 57.5 58.0 11.7 0.0 0.503481 102969 103088 1097-1208 1.000000 81.0 ycf1_p2 ycf1 2 GCGTTCACGGTTTATTCCTG CCAAAAGTTGCCAAACTGGG 20 20 50.0 50.0 57.5 58.0 0.8 0.0 0.568493 102969 103088 943-1054 1.000000 80.8 ycf1_p3 ycf1 3 CAATCTATTATGCGCCGCTG CCAAAAGTTGCCAAACTGGG 20 20 50.0 50.0 57.5 58.0 11.7 0.0 0.563449 102969 103088 1096-1207 1.000000 80.6 ycf1_p4 ycf1 4 TCAATCTATTATGCGCCGCT TGCCAAACTGGGAAGGTATG 20 20 45.0 50.0 57.5 57.8 11.7 0.0 0.670050 102969 103088 1089-1200 1.000000 79.7 ycf1_p5 ycf1 5 TCAATCTATTATGCGCCGCT GCCAAACTGGGAAGGTATGT 20 20 45.0 50.0 57.5 57.8 11.7 0.0 0.671616 102969 103088 1088-1199 1.000000 79.7 trnL-UAG-rpl32_p1 trnL-UAG-rpl32 1 AAAAGGCCCGAAGTAGCAAA AAGTGGACTGCGACAACAAT 20 20 45.0 45.0 58.0 58.0 0.0 0.0 0.042975 117400 118761 2383-2444 1.000000 83.2 trnL-UAG-rpl32_p2 trnL-UAG-rpl32 2 CAGCGTGTCTACCAATTCCA AAGTGGACTGCGACAACAAT 20 20 50.0 45.0 57.9 58.0 0.0 0.0 0.125988 117400 118761 1861-1902 1.000000 83.1 trnL-UAG-rpl32_p3 trnL-UAG-rpl32 3 AGCGTGTCTACCAATTCCAC AAGTGGACTGCGACAACAAT 20 20 50.0 45.0 57.9 58.0 0.0 0.0 0.127444 117400 118761 1860-1901 1.000000 83.1 trnL-UAG-rpl32_p4 trnL-UAG-rpl32 4 ACGACTGAAACGACCGAAAA AAGTGGACTGCGACAACAAT 20 20 45.0 45.0 58.1 58.0 0.0 0.0 0.107452 117400 118761 2092-2153 1.000000 83.0 trnL-UAG-rpl32_p5 trnL-UAG-rpl32 5 AAAAGGCCCGAAGTAGCAAA CGGTAGATAAGTGGACTGCG 20 20 45.0 55.0 58.0 57.9 0.0 0.0 0.131410 117400 118761 2391-2452 1.000000 82.5 rpl32-ndhF_p1 rpl32-ndhF 1 CAAAGCTTTCAACGCTGTCC TTGGAAGTGGACTGAAAGGT 20 20 50.0 45.0 58.2 56.6 9.2 0.0 1.659895 118936 119882 1093-1118 1.000000 69.4 rpl32-ndhF_p2 rpl32-ndhF 2 CCCTTCTTCTTCCACACGTT TTGGAAGTGGACTGAAAGGT 20 20 50.0 45.0 57.7 56.6 0.0 0.0 1.674796 118936 119882 1068-1093 1.000000 69.3 rpl32-ndhF_p3 rpl32-ndhF 3 TCAACGCTGTCCAATATCCC TTGGAAGTGGACTGAAAGGT 20 20 50.0 45.0 57.7 56.6 0.0 0.0 1.744261 118936 119882 1085-1110 1.000000 68.8 rpl32-ndhF_p4 rpl32-ndhF 4 CAACGCTGTCCAATATCCCT TTGGAAGTGGACTGAAAGGT 20 20 50.0 45.0 57.7 56.6 0.0 0.0 1.750742 118936 119882 1084-1109 1.000000 68.7 rpl32-ndhF_p5 rpl32-ndhF 5 AGCTTTCAACGCTGTCCAAT TTGGAAGTGGACTGAAAGGT 20 20 45.0 45.0 58.4 56.6 0.0 0.0 1.809471 118936 119882 1090-1115 1.000000 68.2