primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnK-UUU-trnQ-UUG_p1 trnK-UUU-trnQ-UUG 1 AAAGCCGAGTACTCTACCGT GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 58.2 58.1 20.3 16.9 0.244521 4026 5642 976-2657 1.000000 90.0 trnK-UUU-trnQ-UUG_p2 trnK-UUU-trnQ-UUG 2 AAGCCGAGTACTCTACCGTT GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 58.2 58.1 20.3 16.9 0.244521 4026 5642 975-2656 1.000000 90.0 trnK-UUU-trnQ-UUG_p3 trnK-UUU-trnQ-UUG 3 AAAGCCGAGTACTCTACCGT CTCGGAGGTTCGAATCCTTC 20 20 50.0 55.0 58.2 57.8 20.3 16.9 0.379772 4026 5642 976-2661 1.000000 89.0 trnK-UUU-trnQ-UUG_p4 trnK-UUU-trnQ-UUG 4 AAGCCGAGTACTCTACCGTT CTCGGAGGTTCGAATCCTTC 20 20 50.0 55.0 58.2 57.8 20.3 16.9 0.379772 4026 5642 975-2660 1.000000 89.0 trnK-UUU-trnQ-UUG_p5 trnK-UUU-trnQ-UUG 5 TACCGTTGAGTTAGCAACCC GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 57.5 58.1 0.0 16.9 0.536858 4026 5642 962-2643 1.000000 87.7 trnS-GCU-trnG-UCC_p1 trnS-GCU-trnG-UCC 1 CCGTCGCTTTAATCCACTCA ACGAATCGCACTTTTACCACT 20 21 50.0 42.9 58.0 58.2 0.0 1.2 1.241837 7012 8027 358-2278 1.000000 82.1 trnS-GCU-trnG-UCC_p2 trnS-GCU-trnG-UCC 2 CCGTCGCTTTAATCCACTCA ACGAATCGCACTTTTACCAC 20 20 50.0 45.0 58.0 56.8 0.0 1.2 1.248863 7012 8027 357-2278 1.000000 82.0 trnS-GCU-trnG-UCC_p3 trnS-GCU-trnG-UCC 3 TCGCTTTAATCCACTCAGCC ACGAATCGCACTTTTACCACT 20 21 50.0 42.9 58.0 58.2 0.0 1.2 1.261430 7012 8027 355-2279 1.000000 81.9 trnS-GCU-trnG-UCC_p4 trnS-GCU-trnG-UCC 4 TCGCTTTAATCCACTCAGCC ACGAATCGCACTTTTACCAC 20 20 50.0 45.0 58.0 56.8 0.0 1.2 1.268456 7012 8027 354-2279 1.000000 81.9 trnS-GCU-trnG-UCC_p5 trnS-GCU-trnG-UCC 5 CAGATTAGCAATCCGTCGCT ACGAATCGCACTTTTACCACT 20 21 50.0 42.9 58.1 58.2 5.6 1.2 1.379163 7012 8027 370-2279 1.000000 81.0 trnG-UCC-trnR-UCU_p1 trnG-UCC-trnR-UCU 1 AGCCTTCCAAGCTAACGATG AGAAGACCTCTGTCCTATCCA 20 21 50.0 47.6 58.0 56.9 0.0 0.0 2.081443 8866 9012 220-2279 1.000000 73.6 trnG-UCC-trnR-UCU_p2 trnG-UCC-trnR-UCU 2 CCTAGCCTTCCAAGCTAACG AGAAGACCTCTGTCCTATCCA 20 21 55.0 47.6 58.1 56.9 0.0 0.0 2.110280 8866 9012 223-2279 1.000000 73.3 trnG-UCC-trnR-UCU_p3 trnG-UCC-trnR-UCU 3 AGCCTTCCAAGCTAACGATG AGGTTTAGAAGACCTCTGTCCT 20 22 50.0 45.5 58.0 57.9 0.0 0.0 2.164771 8866 9012 226-2279 1.000000 72.8 trnG-UCC-trnR-UCU_p4 trnG-UCC-trnR-UCU 4 CCTAGCCTTCCAAGCTAACG AGGTTTAGAAGACCTCTGTCCT 20 22 55.0 45.5 58.1 57.9 0.0 0.0 2.193608 8866 9012 229-2279 1.000000 72.5 trnG-UCC-trnR-UCU_p5 trnG-UCC-trnR-UCU 5 CCCTAGCCTTCCAAGCTAAC AGAAGACCTCTGTCCTATCCA 20 21 55.0 47.6 57.7 56.9 0.0 0.0 2.385293 8866 9012 224-2279 1.000000 71.1 atpF_p1 atpF 1 ACGAGCAATACCATCCCCTA GTGGCATTGGCGCTTTTATT 20 20 50.0 45.0 57.9 58.0 0.0 15.8 0.105862 10801 12343 969-2277 0.976190 90.2 atpF_p2 atpF 2 CTAATTCGCCTGCCATCACT GTGGCATTGGCGCTTTTATT 20 20 50.0 45.0 58.0 58.0 0.0 15.8 0.049710 10801 12343 1006-2279 0.952381 89.7 atpF_p3 atpF 3 CTAATTCGCCTGCCATCACT AAGCCGTAGAAGGTATTGCG 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.105026 10801 12343 1008-2373 0.952381 89.3 atpF_p4 atpF 4 GAGCAATGCCTACTGTACCC GTGGCATTGGCGCTTTTATT 20 20 55.0 45.0 58.0 58.0 0.0 15.8 0.053825 10801 12343 1039-2294 0.880952 86.8 atpF_p5 atpF 5 GCAATGCCTACTGTACCCTC GTGGCATTGGCGCTTTTATT 20 20 55.0 45.0 58.0 58.0 0.0 15.8 0.053825 10801 12343 1037-2292 0.880952 86.8 atpH-atpI_p1 atpH-atpI 1 CGCAATACCTTCTACGGCTT AGCAAAGCCCAAATTGGAGA 20 20 50.0 45.0 58.1 58.0 0.0 14.6 0.078077 12847 13644 1297-2571 1.000000 91.4 atpH-atpI_p2 atpH-atpI 2 AATAAAAGCGCCAATGCCAC AGCAAAGCCCAAATTGGAGA 20 20 45.0 45.0 58.0 58.0 2.3 14.6 0.022761 12847 13644 1404-2573 0.976190 90.9 atpH-atpI_p3 atpH-atpI 3 AATAAAAGCGCCAATGCCAC TATGGTCCTTGGGTTCCCTT 20 20 45.0 50.0 58.0 57.9 2.3 9.4 0.077583 12847 13644 1380-2549 0.976190 90.4 atpH-atpI_p4 atpH-atpI 4 AATAAAAGCGCCAATGCCAC CTGCGCCCACGAATGATATA 20 20 45.0 50.0 58.0 57.9 2.3 4.2 0.087600 12847 13644 1268-2437 0.976190 90.3 atpH-atpI_p5 atpH-atpI 5 AATAAAAGCGCCAATGCCAC GCGAATCCATGGAAGGTCAT 20 20 45.0 50.0 58.0 58.0 2.3 20.7 0.035880 12847 13644 932-2280 0.952381 89.8 rpoB-trnC-GCA_p1 rpoB-trnC-GCA 1 TCCCTCATTTCCATCCCGAA TTAGGCGACACCCAGATTTG 20 20 50.0 50.0 58.4 57.9 0.0 0.0 0.517359 25930 27200 900-2279 0.976190 86.9 rpoB-trnC-GCA_p2 rpoB-trnC-GCA 2 TCCCTCATTTCCATCCCGAA TTGTTGATTAGGCGACACCC 20 20 50.0 50.0 58.4 58.2 0.0 0.0 0.593335 25930 27200 900-2279 0.976190 86.3 rpoB-trnC-GCA_p3 rpoB-trnC-GCA 3 GTTCTTCCATCAAGCCCTGA TTAGGCGACACCCAGATTTG 20 20 50.0 50.0 57.5 57.9 0.0 0.0 0.604848 25930 27200 979-2278 0.976190 86.2 rpoB-trnC-GCA_p4 rpoB-trnC-GCA 4 TTCCCTCATTTCCATCCCGA TTAGGCGACACCCAGATTTG 20 20 50.0 50.0 58.4 57.9 0.0 0.0 0.517359 25930 27200 901-2279 0.952381 86.0 rpoB-trnC-GCA_p5 rpoB-trnC-GCA 5 TTCCCTCATTTCCATCCCGA TTGTTGATTAGGCGACACCC 20 20 50.0 50.0 58.4 58.2 0.0 0.0 0.593335 25930 27200 901-2279 0.952381 85.3 trnC-GCA-petN_p1 trnC-GCA-petN 1 CAAATCTGGGTGTCGCCTAA TACCCCTAGAGTCCACTCCT 20 20 50.0 55.0 57.9 58.0 1.7 3.0 0.110610 27282 28227 652-2278 0.976190 90.2 trnC-GCA-petN_p2 trnC-GCA-petN 2 GGGTGTCGCCTAATCAACAA TACCCCTAGAGTCCACTCCT 20 20 50.0 55.0 58.2 58.0 1.7 3.0 0.186585 27282 28227 645-2277 0.976190 89.6 trnC-GCA-petN_p3 trnC-GCA-petN 3 CAAATCTGGGTGTCGCCTAA AGTCCACTCCTTCCCCATAC 20 20 50.0 55.0 57.9 58.1 1.7 0.0 0.227009 27282 28227 653-2279 0.976190 89.2 trnC-GCA-petN_p4 trnC-GCA-petN 4 CAAATCTGGGTGTCGCCTAA GTCCACTCCTTCCCCATACT 20 20 50.0 55.0 57.9 58.1 1.7 0.0 0.227009 27282 28227 652-2278 0.976190 89.2 trnC-GCA-petN_p5 trnC-GCA-petN 5 CAAATCTGGGTGTCGCCTAA AGCCCAAGCGAGACTTACTA 20 20 50.0 50.0 57.9 58.2 1.7 0.0 0.259298 27282 28227 654-2277 0.976190 89.0 psbM-trnD-GUC_p1 psbM-trnD-GUC 1 ATTGATTCTTTCGACGGCCA AGTTCAATCGGTCAGAGCAC 20 20 45.0 50.0 57.9 57.9 2.2 0.0 0.194004 29227 30140 1496-2306 0.642857 71.7 psbM-trnD-GUC_p2 psbM-trnD-GUC 2 ATTGATTCTTTCGACGGCCA TCTCTTTCAAGGAGGCAACG 20 20 45.0 50.0 57.9 57.8 2.2 0.0 0.277782 29227 30140 2054-2858 0.642857 71.4 psbM-trnD-GUC_p3 psbM-trnD-GUC 3 TTGATTCTTTCGACGGCCAT AGTTCAATCGGTCAGAGCAC 20 20 45.0 50.0 57.9 57.9 2.2 0.0 0.194004 29227 30140 1495-2305 0.571429 68.8 psbM-trnD-GUC_p4 psbM-trnD-GUC 4 TTGATTCTTTCGACGGCCAT TCTCTTTCAAGGAGGCAACG 20 20 45.0 50.0 57.9 57.8 2.2 0.0 0.277782 29227 30140 2053-2857 0.571429 68.4 psbM-trnD-GUC_p5 psbM-trnD-GUC 5 TTGATTCTTTCGACGGCCAT ATAGACCTCACCGGGATTGT 20 20 45.0 50.0 57.9 57.8 2.2 6.3 0.284197 29227 30140 1515-2325 0.571429 68.1 trnT-UGU-trnL-UAA_p1 trnT-UGU-trnL-UAA 1 GCGATGCTCTAACCTCTGAG ACCAATTTCGCCATATCCCC 20 20 55.0 50.0 57.9 58.0 0.0 0.0 0.137364 45731 46587 861-2278 1.000000 90.9 trnT-UGU-trnL-UAA_p2 trnT-UGU-trnL-UAA 2 GAGTCGAACCGATGACCATC ACCAATTTCGCCATATCCCC 20 20 55.0 50.0 58.2 58.0 0.0 0.0 0.163174 45731 46587 892-2279 1.000000 90.7 trnT-UGU-trnL-UAA_p3 trnT-UGU-trnL-UAA 3 GCGATGCTCTAACCTCTGAG TAGCGTCTACCAATTTCGCC 20 20 55.0 50.0 57.9 58.1 0.0 0.0 0.202173 45731 46587 869-2278 1.000000 90.4 trnT-UGU-trnL-UAA_p4 trnT-UGU-trnL-UAA 4 GAGTCGAACCGATGACCATC TAGCGTCTACCAATTTCGCC 20 20 55.0 50.0 58.2 58.1 0.0 0.0 0.227983 45731 46587 900-2279 1.000000 90.2 trnT-UGU-trnL-UAA_p5 trnT-UGU-trnL-UAA 5 GCGATGCTCTAACCTCTGAG AGTCCGTAGCGTCTACCAAT 20 20 55.0 50.0 57.9 58.2 0.0 10.2 0.372548 45731 46587 875-2277 1.000000 89.0 trnF-GAA-ndhJ_p1 trnF-GAA-ndhJ 1 CCTCGTGTCACCAGTTCAAA TGAAATACAAGATGCTCGTTGA 20 22 50.0 36.4 58.1 56.1 0.0 0.4 3.938560 47430 48118 620-2280 0.976190 59.5 trnF-GAA-ndhJ_p2 trnF-GAA-ndhJ 2 AATCCTCGTGTCACCAGTTC TGAAATACAAGATGCTCGTTGA 20 22 50.0 36.4 57.5 56.1 0.0 0.4 4.344030 47430 48118 623-2283 0.976190 56.3 trnF-GAA-ndhJ_p3 trnF-GAA-ndhJ 3 CCTCGTGTCACCAGTTCAAA TGAAATACAAGATGCTCGTTG 20 21 50.0 38.1 58.1 54.6 0.0 0.0 4.440150 47430 48118 620-2279 0.976190 55.5 trnF-GAA-ndhJ_p4 trnF-GAA-ndhJ 4 CCTCGTGTCACCAGTTCAAA ATGAAATACAAGATGCTCGTTGA 20 23 50.0 34.8 58.1 56.6 0.0 0.4 4.442509 47430 48118 621-2281 0.976190 55.5 trnF-GAA-ndhJ_p5 trnF-GAA-ndhJ 5 TGGTAGAGCAGAGGACTGAA TGAAATACAAGATGCTCGTTGA 20 22 50.0 36.4 57.4 56.1 0.0 0.4 4.491576 47430 48118 643-2281 0.976190 55.1 ndhC-trnV-UAC_p1 ndhC-trnV-UAC 1 TGCCAAGATAGGAATAATGCTTG GGTTCGAATCCGTATAGCCC 23 20 39.1 55.0 57.0 57.9 0.0 0.0 4.108723 49841 50826 336-2279 1.000000 59.1 ndhC-trnV-UAC_p2 ndhC-trnV-UAC 2 TGCCAAGATAGGAATAATGCT GGTTCGAATCCGTATAGCCC 21 20 38.1 55.0 54.7 57.9 0.0 0.0 4.337598 49841 50826 336-2279 1.000000 57.3 ndhC-trnV-UAC_p3 ndhC-trnV-UAC 3 TGCCAAGATAGGAATAATGCTTG CGGTTCGAATCCGTATAGCC 23 20 39.1 55.0 57.0 58.3 0.0 22.8 4.338104 49841 50826 336-2279 1.000000 57.3 ndhC-trnV-UAC_p4 ndhC-trnV-UAC 4 GCCAAGATAGGAATAATGCTTGA GGTTCGAATCCGTATAGCCC 23 20 39.1 55.0 56.7 57.9 0.0 0.0 4.364099 49841 50826 335-2278 1.000000 57.1 ndhC-trnV-UAC_p5 ndhC-trnV-UAC 5 TGCCAAGATAGGAATAATGCTTGA GGTTCGAATCCGTATAGCCC 24 20 37.5 55.0 58.3 57.9 0.0 0.0 4.382018 49841 50826 336-2279 1.000000 56.9 petA-psbJ_p1 petA-psbJ 1 GGCATCTGTGATTTTGGCAC GGGTTGGGTTCATCTCTGTAG 20 21 50.0 52.4 58.0 57.7 0.0 0.0 1.268452 62242 63132 92-2279 1.000000 81.9 petA-psbJ_p2 petA-psbJ 2 GGCATCTGTGATTTTGGCAC GGGTTGGGTTCATCTCTGTA 20 20 50.0 50.0 58.0 56.5 0.0 0.0 1.467602 62242 63132 91-2276 1.000000 80.3 petA-psbJ_p3 petA-psbJ 3 TGGCATCTGTGATTTTGGCA GGGTTGGGTTCATCTCTGTAG 20 21 45.0 52.4 58.4 57.7 0.0 0.0 1.637800 62242 63132 92-2280 1.000000 78.9 petA-psbJ_p4 petA-psbJ 4 TGGCATCTGTGATTTTGGCA GGGTTGGGTTCATCTCTGTA 20 20 45.0 50.0 58.4 56.5 0.0 0.0 1.836950 62242 63132 91-2277 1.000000 77.3 petA-psbJ_p5 petA-psbJ 5 GCATCTGTGATTTTGGCACA GGGTTGGGTTCATCTCTGTAG 20 21 45.0 52.4 57.3 57.7 0.0 0.0 1.996712 62242 63132 92-2279 1.000000 76.0 trnP-UGG-psaJ_p1 trnP-UGG-psaJ 1 CGAACTGAACTAAGAGCGCT GCTTTCGAACCAGCATCCTA 20 20 50.0 50.0 58.0 58.0 11.3 15.3 0.040203 65382 65758 91-2276 0.976190 90.7 trnP-UGG-psaJ_p2 trnP-UGG-psaJ 2 CGAACTGAACTAAGAGCGCT CTGACATCCTTACCCTTGGC 20 20 50.0 55.0 58.0 58.0 11.3 0.0 0.060150 65382 65758 91-2278 0.976190 90.6 trnP-UGG-psaJ_p3 trnP-UGG-psaJ 3 TATTTCTCCGGAATTGCGGG GCTTTCGAACCAGCATCCTA 20 20 50.0 50.0 58.0 58.0 34.0 15.3 0.062382 65382 65758 92-2277 0.619048 74.7 trnP-UGG-psaJ_p4 trnP-UGG-psaJ 4 CGAACTGAACTAAGAGCGCT GCGAAATTTGAGTCACGTGG 20 20 50.0 50.0 58.0 58.0 11.3 17.0 0.065556 65382 65758 91-3000 0.595238 73.5 trnP-UGG-psaJ_p5 trnP-UGG-psaJ 5 CCGGAATTGCGGGTATTGTA GCTTTCGAACCAGCATCCTA 20 20 50.0 50.0 58.0 58.0 28.8 15.3 0.067879 65382 65758 91-2276 0.595238 72.9 ycf1_p1 ycf1 1 GCTCGGGTTATGGAAGAAGG GCTTTTCTTGAACGAAGCCC 20 20 55.0 50.0 58.0 57.9 0.0 8.0 0.096952 108710 108829 91-2278 0.809524 83.0 ycf1_p2 ycf1 2 GCTCGGGTTATGGAAGAAGG TCTGGTTCTCTTCTCAGCCA 20 20 55.0 50.0 58.0 58.0 0.0 0.0 0.060529 108710 108829 91-2278 0.666667 75.8 ycf1_p3 ycf1 3 AGGGCCCTCTTATCTCTTCC TCTGGTTCTCTTCTCAGCCA 20 20 55.0 50.0 57.9 58.0 22.3 0.0 0.126209 108710 108829 92-2278 0.666667 75.2 ycf1_p4 ycf1 4 GGGCCCTCTTATCTCTTCCT TCTGGTTCTCTTCTCAGCCA 20 20 55.0 50.0 57.9 58.0 17.0 0.0 0.126209 108710 108829 91-2278 0.666667 75.2 ycf1_p5 ycf1 5 AAGGGGGAGAAAGTGAGGAA TCTGGTTCTCTTCTCAGCCA 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.149314 108710 108829 93-2279 0.666667 74.7 ycf1-rps15_p1 ycf1-rps15 1 TGTGTCTGGATGTGATGCTG CAGCAGTCGTTGACGTTTTC 20 20 50.0 50.0 57.9 58.0 0.0 3.2 0.108725 113508 113797 91-2279 0.928571 88.3 ycf1-rps15_p2 ycf1-rps15 2 TGTGTCTGGATGTGATGCTG TTCTGGCGCATTTACCGTTA 20 20 50.0 45.0 57.9 57.9 0.0 10.8 0.199757 113508 113797 91-2277 0.928571 87.5 ycf1-rps15_p3 ycf1-rps15 3 TGTGTCTGGATGTGATGCTG TCCGCCATAAAAGGTCCAAG 20 20 50.0 50.0 57.9 57.9 0.0 0.0 0.226320 113508 113797 91-2279 0.928571 87.3 ycf1-rps15_p4 ycf1-rps15 4 TGTGTCTGGATGTGATGCTG CGCTCTTTGGGGTACTTGAA 20 20 50.0 50.0 57.9 57.8 0.0 0.0 0.282449 113508 113797 91-2279 0.928571 86.9 ycf1-rps15_p5 ycf1-rps15 5 TGTGTCTGGATGTGATGCTG AACACCATGCATTGATGGGT 20 20 50.0 45.0 57.9 58.1 0.0 8.9 0.162160 113508 113797 90-2278 0.904762 86.9 ndhF_p1 ndhF 1 AATCCGCACAATTTCCCCTT GAGCTACTGAGGAACAACGG 20 20 45.0 55.0 58.1 58.0 0.0 0.0 0.065140 126776 126925 93-2281 0.928571 88.6 ndhF_p2 ndhF 2 ACAGCAGGATTAACCGCATT GCTTCCTTCGTAACTCTCGG 20 20 45.0 55.0 57.9 58.1 0.0 0.0 0.218083 126776 126925 93-2280 0.547619 69.2 ndhF_p3 ndhF 3 ACTTTTGATGGCTGTTTGCG GCTTCCTTCGTAACTCTCGG 20 20 45.0 55.0 57.9 58.1 0.0 0.0 0.227908 126776 126925 92-2278 0.547619 69.2 ndhF_p4 ndhF 4 GTATGGGGGAGAGAACCACT GCTTCCTTCGTAACTCTCGG 20 20 55.0 55.0 58.1 58.1 0.0 0.0 0.208372 126776 126925 91-2280 0.523810 68.4 ndhF_p5 ndhF 5 CTGTATGGGGGAGAGAACCA GCTTCCTTCGTAACTCTCGG 20 20 55.0 55.0 58.1 58.1 0.0 0.0 0.209737 126776 126925 91-2716 0.523810 68.1