feature_id feature_type parent_gene label_name start end strand length_bp region pi variable_sites indel_sites conserved_left_bp conserved_right_bp primer_available species_resolution unique_haplotype_count species_specific_haplotype_ratio interspecific_divergence alignment_reliability markerseek_score psbA gene psbA psbA 89 1150 -1 1062 LSC 0.000628 1 0 66 300 no 0.333333 2 0.500000 0.000628 1.000000 36.600000 IGS_001 igs psbA|matK psbA-matK 1151 1666 0 516 LSC 0.001292 1 55 300 300 yes 1.000000 3 1.000000 0.001369 1.000000 63.000000 matK gene matK matK 1667 3214 -1 1548 LSC 0.000431 1 0 107 263 no 0.333333 2 0.500000 0.000431 1.000000 39.400000 IGS_002 igs matK|rps16 matK-rps16 3215 4495 0 1281 LSC 0.003660 7 8 300 300 yes 1.000000 3 1.000000 0.003663 0.995316 61.700000 rps16 gene rps16 rps16 4496 5586 -1 1091 LSC 0.002444 4 0 77 60 no 0.333333 2 0.500000 0.002444 1.000000 37.300000 IGS_003 igs rps16|trnQ-TTG rps16-trnQ-TTG 5587 6676 0 1090 LSC 0.034970 54 55 90 300 yes 1.000000 3 1.000000 0.034395 0.953211 77.100000 trnQ-TTG tRNA trnQ-TTG trnQ-TTG 6677 6748 -1 72 LSC 0.000000 0 0 121 300 no 0.000000 1 0.000000 0.000000 1.000000 27.800000 IGS_004 igs trnQ-TTG|psbK trnQ-TTG-psbK 6749 7102 0 354 LSC 0.000000 0 0 193 125 no 0.000000 1 0.000000 0.000000 1.000000 29.200000 psbK gene psbK psbK 7103 7288 1 186 LSC 0.003584 1 0 300 196 no 0.333333 2 0.500000 0.003584 1.000000 42.000000 IGS_005 igs psbK|psbI psbK-psbI 7289 7522 0 234 LSC 0.005698 2 0 60 175 no 1.000000 3 1.000000 0.005698 1.000000 45.600000 psbI gene psbI psbI 7523 7711 1 189 LSC 0.003546 1 1 4 300 no 0.333333 2 0.500000 0.003546 0.994709 28.000000 IGS_006 igs psbI|trnS-GCT psbI-trnS-GCT 7712 7793 0 82 LSC 0.000000 0 0 13 300 no 0.000000 1 0.000000 0.000000 1.000000 19.700000 trnS-GCT tRNA trnS-GCT trnS-GCT 7794 7886 -1 93 LSC 0.000000 0 0 95 300 no 0.000000 1 0.000000 0.000000 1.000000 25.900000 IGS_007 igs trnS-GCT|psbD trnS-GCT-psbD 7887 8783 0 897 LSC 0.001488 2 1 188 300 no 0.333333 2 0.500000 0.001488 0.998885 46.400000 psbD gene psbD psbD 8784 9845 1 1062 LSC 0.000000 0 0 277 300 no 0.000000 1 0.000000 0.000000 1.000000 40.000000 psbC gene psbC psbC 9751 11214 1 1464 LSC 0.000000 0 0 300 0 no 0.000000 1 0.000000 0.000000 1.000000 25.000000 IGS_009 igs psbC|trnS-TGA psbC-trnS-TGA 11215 11371 0 157 LSC 0.004246 1 0 300 300 no 0.333333 2 0.500000 0.004246 1.000000 42.700000 trnS-TGA tRNA trnS-TGA trnS-TGA 11372 11459 -1 88 LSC 0.000000 0 0 156 300 no 0.000000 1 0.000000 0.000000 1.000000 30.400000 IGS_010 igs trnS-TGA|psbZ trnS-TGA-psbZ 11460 11802 0 343 LSC 0.000000 0 0 244 218 no 0.000000 1 0.000000 0.000000 1.000000 34.600000 psbZ gene psbZ psbZ 11803 11991 1 189 LSC 0.000000 0 0 300 29 no 0.000000 1 0.000000 0.000000 1.000000 20.900000 IGS_011 igs psbZ|trnG-GCC psbZ-trnG-GCC 11992 12183 0 192 LSC 0.029144 8 9 300 106 no 0.333333 2 0.500000 0.029144 0.953125 55.600000 trnG-GCC tRNA trnG-GCC trnG-GCC 12184 12254 1 71 LSC 0.000000 0 0 145 35 no 0.000000 1 0.000000 0.000000 1.000000 21.400000 IGS_012 igs trnG-GCC|trnfM-CAT trnG-GCC-trnfM-CAT 12255 12577 0 323 LSC 0.016512 7 2 216 300 yes 1.000000 3 1.000000 0.012416 1.000000 63.800000 trnfM-CAT tRNA trnfM-CAT trnfM-CAT 12578 12651 -1 74 LSC 0.000000 0 0 61 300 no 0.000000 1 0.000000 0.000000 1.000000 23.300000 IGS_013 igs trnfM-CAT|trnT-GGT trnfM-CAT-trnT-GGT 12652 14207 0 1556 LSC 0.009624 22 46 135 87 yes 1.000000 3 1.000000 0.009668 0.979434 59.200000 trnT-GGT tRNA trnT-GGT trnT-GGT 14208 14279 1 72 LSC 0.000000 0 0 85 15 no 0.000000 1 0.000000 0.000000 1.000000 19.900000 trnT-GGT tRNA trnT-GGT trnT-GGT 14275 14346 1 72 LSC 0.018519 2 0 152 129 no 0.333333 2 0.500000 0.018519 1.000000 46.500000 IGS_015 igs trnT-GGT|trnE-TTC trnT-GGT-trnE-TTC 14347 14726 0 380 LSC 0.016260 7 93 9 300 no 0.333333 2 0.500000 0.016260 0.755263 35.100000 trnE-TTC tRNA trnE-TTC trnE-TTC 14727 14799 1 73 LSC 0.000000 0 0 204 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_016 igs trnE-TTC|trnY-GTA trnE-TTC-trnY-GTA 14800 14860 0 61 LSC 0.000000 0 0 277 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 trnY-GTA tRNA trnY-GTA trnY-GTA 14861 14944 1 84 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_017 igs trnY-GTA|trnD-GTC trnY-GTA-trnD-GTC 14945 15304 0 360 LSC 0.000000 0 10 300 126 no 0.333333 2 0.500000 0.000000 0.972222 38.200000 trnD-GTC tRNA trnD-GTC trnD-GTC 15305 15378 1 74 LSC 0.000000 0 0 300 52 no 0.000000 1 0.000000 0.000000 1.000000 22.700000 IGS_018 igs trnD-GTC|psbM trnD-GTC-psbM 15379 16102 0 724 LSC 0.001844 2 3 300 300 yes 1.000000 3 1.000000 0.001847 0.998619 60.400000 psbM gene psbM psbM 16103 16207 1 105 LSC 0.000000 0 0 9 219 no 0.000000 1 0.000000 0.000000 1.000000 19.400000 IGS_019 igs psbM|petN psbM-petN 16208 16792 0 585 LSC 0.003663 3 39 114 202 no 0.333333 2 0.500000 0.003663 0.933333 45.800000 petN gene petN petN 16793 16888 -1 96 LSC 0.000000 0 0 72 106 no 0.000000 1 0.000000 0.000000 1.000000 24.100000 IGS_020 igs petN|trnC-GCA petN-trnC-GCA 16889 17319 0 431 LSC 0.004640 3 0 168 300 no 1.000000 3 1.000000 0.004640 1.000000 55.800000 trnC-GCA tRNA trnC-GCA trnC-GCA 17320 17390 -1 71 LSC 0.000000 0 0 38 300 no 0.000000 1 0.000000 0.000000 1.000000 21.600000 IGS_021 igs trnC-GCA|rpoB trnC-GCA-rpoB 17391 18566 0 1176 LSC 0.005111 9 2 109 300 no 1.000000 3 1.000000 0.005111 0.998299 55.300000 rpoB gene rpoB rpoB 18567 21794 1 3228 LSC 0.000620 3 0 55 300 no 1.000000 3 1.000000 0.000620 1.000000 44.800000 IGS_022 igs rpoB|rpoC1 rpoB-rpoC1 21795 21831 0 37 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rpoC1 gene rpoC1 rpoC1 21832 23883 1 2052 LSC 0.001624 5 0 300 300 no 1.000000 3 1.000000 0.001624 1.000000 58.600000 IGS_023 igs rpoC1|rpoC2 rpoC1-rpoC2 23884 24082 0 199 LSC 0.000000 0 0 140 300 no 0.000000 1 0.000000 0.000000 1.000000 29.200000 rpoC2 gene rpoC2 rpoC2 24083 28654 1 4572 LSC 0.001173 8 27 300 273 no 1.000000 3 1.000000 0.001173 0.994094 54.500000 IGS_024 igs rpoC2|rps2 rpoC2-rps2 28655 28948 0 294 LSC 0.002268 1 0 300 300 no 0.333333 2 0.500000 0.002268 1.000000 41.400000 rps2 gene rps2 rps2 28949 29659 1 711 LSC 0.000000 0 0 20 300 no 0.000000 1 0.000000 0.000000 1.000000 26.500000 IGS_025 igs rps2|atpI rps2-atpI 29660 29909 0 250 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 atpI gene atpI atpI 29910 30653 1 744 LSC 0.000000 0 0 300 178 no 0.000000 1 0.000000 0.000000 1.000000 38.400000 IGS_026 igs atpI|atpH atpI-atpH 30654 31472 0 819 LSC 0.001630 2 2 300 300 no 1.000000 3 1.000000 0.001631 0.998779 60.000000 atpH gene atpH atpH 31473 31718 1 246 LSC 0.000000 0 0 63 98 no 0.000000 1 0.000000 0.000000 1.000000 23.500000 IGS_027 igs atpH|atpF atpH-atpF 31719 32180 0 462 LSC 0.004329 3 0 300 300 no 0.333333 2 0.500000 0.004329 1.000000 46.100000 atpF gene atpF atpF 32181 33567 1 1387 LSC 0.000482 1 4 198 300 no 0.333333 2 0.500000 0.000482 0.997116 46.700000 IGS_028 igs atpF|atpA atpF-atpA 33568 33657 0 90 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 atpA gene atpA atpA 33658 35181 1 1524 LSC 0.000000 0 0 300 47 no 0.000000 1 0.000000 0.000000 1.000000 28.500000 IGS_029 igs atpA|trnR-TCT atpA-trnR-TCT 35182 35317 0 136 LSC 0.004902 1 0 300 300 no 0.333333 2 0.500000 0.004902 1.000000 43.100000 trnR-TCT tRNA trnR-TCT trnR-TCT 35318 35389 -1 72 LSC 0.000000 0 0 88 300 no 0.000000 1 0.000000 0.000000 1.000000 25.400000 IGS_030 igs trnR-TCT|rps14 trnR-TCT-rps14 35390 35771 0 382 LSC 0.000000 0 1 160 300 no 0.333333 2 0.500000 0.000000 0.997382 38.900000 rps14 gene rps14 rps14 35772 36083 -1 312 LSC 0.000000 0 0 300 66 no 0.000000 1 0.000000 0.000000 1.000000 23.900000 IGS_031 igs rps14|psaB rps14-psaB 36084 36233 0 150 LSC 0.004598 1 6 300 300 no 1.000000 3 1.000000 0.004614 0.966667 59.200000 psaB gene psaB psaB 36234 38438 -1 2205 LSC 0.001209 4 0 83 300 no 1.000000 3 1.000000 0.001209 1.000000 49.300000 IGS_032 igs psaB|psaA psaB-psaA 38439 38463 0 25 LSC 0.000000 0 0 234 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 psaA gene psaA psaA 38464 40716 -1 2253 LSC 0.000888 3 0 259 219 no 1.000000 3 1.000000 0.000888 1.000000 57.700000 IGS_033 igs psaA|ycf3 psaA-ycf3 40717 41308 0 592 LSC 0.005921 5 30 300 280 yes 1.000000 3 1.000000 0.005926 0.951014 66.900000 ycf3 gene ycf3 ycf3 41309 43290 -1 1982 LSC 0.001015 3 14 233 137 no 1.000000 3 1.000000 0.001016 0.993946 54.300000 IGS_034 igs ycf3|trnS-GGA ycf3-trnS-GGA 43291 43721 0 431 LSC 0.001547 1 0 300 300 no 0.333333 2 0.500000 0.001547 1.000000 43.700000 trnS-GGA tRNA trnS-GGA trnS-GGA 43722 43808 1 87 LSC 0.000000 0 0 293 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_035 igs trnS-GGA|rps4 trnS-GGA-rps4 43809 44088 0 280 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rps4 gene rps4 rps4 44089 44694 -1 606 LSC 0.000000 0 0 300 42 no 0.000000 1 0.000000 0.000000 1.000000 28.100000 IGS_036 igs rps4|trnT-TGT rps4-trnT-TGT 44695 44996 0 302 LSC 0.004415 2 0 300 300 no 0.333333 2 0.500000 0.004415 1.000000 42.900000 trnT-TGT tRNA trnT-TGT trnT-TGT 44997 45069 -1 73 LSC 0.000000 0 0 51 300 no 0.000000 1 0.000000 0.000000 1.000000 22.600000 IGS_037 igs trnT-TGT|trnF-GAA trnT-TGT-trnF-GAA 45070 46700 0 1631 LSC 0.002460 6 5 124 107 no 1.000000 3 1.000000 0.002460 0.996934 53.300000 trnF-GAA tRNA trnF-GAA trnF-GAA 46701 46773 1 73 LSC 0.000000 0 0 280 34 no 0.000000 1 0.000000 0.000000 1.000000 21.300000 IGS_038 igs trnF-GAA|ndhJ trnF-GAA-ndhJ 46774 47340 0 567 LSC 0.014109 12 0 300 300 yes 1.000000 3 1.000000 0.014109 1.000000 67.100000 ndhJ gene ndhJ ndhJ 47341 47820 -1 480 LSC 0.000000 0 0 100 127 no 0.000000 1 0.000000 0.000000 1.000000 30.000000 IGS_039 igs ndhJ|ndhK ndhJ-ndhK 47821 47918 0 98 LSC 0.000000 0 0 300 29 no 0.000000 1 0.000000 0.000000 1.000000 20.900000 ndhK gene ndhK ndhK 47919 48668 -1 750 LSC 0.002677 3 3 300 300 yes 1.000000 3 1.000000 0.002677 0.996000 60.800000 ndhC gene ndhC ndhC 48659 49021 -1 363 LSC 0.000000 0 0 21 300 no 0.000000 1 0.000000 0.000000 1.000000 21.600000 IGS_041 igs ndhC|trnM-CAT ndhC-trnM-CAT 49022 50799 0 1778 LSC 0.000375 1 0 300 300 no 0.333333 2 0.500000 0.000375 1.000000 45.900000 trnM-CAT tRNA trnM-CAT trnM-CAT 50800 50872 1 73 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_042 igs trnM-CAT|atpE trnM-CAT-atpE 50873 50984 0 112 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 atpE gene atpE atpE 50985 51398 -1 414 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 36.100000 atpB gene atpB atpB 51395 52891 -1 1497 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 40.000000 IGS_044 igs atpB|rbcL atpB-rbcL 52892 53666 0 775 LSC 0.000861 1 1 300 300 no 1.000000 3 1.000000 0.000861 0.998710 59.400000 rbcL gene rbcL rbcL 53667 55097 1 1431 LSC 0.000000 0 0 300 297 no 0.000000 1 0.000000 0.000000 1.000000 40.000000 IGS_045 igs rbcL|rpl23 rbcL-rpl23 55098 55393 0 296 LSC 0.000000 0 1 300 1 no 0.333333 2 0.500000 0.000000 1.000000 25.500000 rpl23 gene rpl23 rpl23 55394 55666 1 273 LSC 0.009768 4 0 300 104 no 1.000000 3 1.000000 0.009768 1.000000 51.500000 IGS_046 igs rpl23|psaI rpl23-psaI 55667 56029 0 363 LSC 0.005882 3 23 4 125 no 1.000000 3 1.000000 0.005882 0.936639 46.900000 psaI gene psaI psaI 56030 56140 1 111 LSC 0.000000 0 0 114 14 no 0.000000 1 0.000000 0.000000 1.000000 19.800000 IGS_047 igs psaI|ycf4 psaI-ycf4 56141 56495 0 355 LSC 0.005634 3 0 225 206 no 1.000000 3 1.000000 0.005634 1.000000 57.200000 ycf4 gene ycf4 ycf4 56496 57053 1 558 LSC 0.001195 1 0 300 89 no 0.333333 2 0.500000 0.001195 1.000000 37.800000 IGS_048 igs ycf4|cemA ycf4-cemA 57054 57425 0 372 LSC 0.003594 2 1 300 226 no 1.000000 3 1.000000 0.003594 0.997312 56.500000 cemA gene cemA cemA 57426 58109 1 684 LSC 0.001952 2 1 26 300 no 0.333333 2 0.500000 0.001952 0.998538 34.600000 IGS_049 igs cemA|petA cemA-petA 58110 58347 0 238 LSC 0.000000 0 0 78 300 no 0.000000 1 0.000000 0.000000 1.000000 24.600000 petA gene petA petA 58348 59310 1 963 LSC 0.000692 1 0 300 300 no 0.333333 2 0.500000 0.000692 1.000000 46.700000 IGS_050 igs petA|psbJ petA-psbJ 59311 60213 0 903 LSC 0.000738 1 0 300 300 no 0.333333 2 0.500000 0.000738 1.000000 46.700000 psbJ gene psbJ psbJ 60214 60336 -1 123 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_051 igs psbJ|psbL psbJ-psbL 60337 60461 0 125 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 psbL gene psbL psbL 60462 60578 -1 117 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_052 igs psbL|psbF psbL-psbF 60579 60600 0 22 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 psbF gene psbF psbF 60601 60720 -1 120 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_053 igs psbF|psbE psbF-psbE 60721 60730 0 10 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 psbE gene psbE psbE 60731 60982 -1 252 LSC 0.000000 0 0 300 69 no 0.000000 1 0.000000 0.000000 1.000000 23.900000 IGS_054 igs psbE|petL psbE-petL 60983 62235 0 1253 LSC 0.003200 6 5 300 113 no 1.000000 3 1.000000 0.003203 0.997606 54.700000 petL gene petL petL 62236 62331 1 96 LSC 0.000000 0 0 300 17 no 0.000000 1 0.000000 0.000000 1.000000 20.000000 IGS_055 igs petL|petG petL-petG 62332 62506 0 175 LSC 0.007984 2 8 300 151 yes 1.000000 3 1.000000 0.007984 0.954286 58.000000 petG gene petG petG 62507 62620 1 114 LSC 0.000000 0 0 14 37 no 0.000000 1 0.000000 0.000000 1.000000 19.800000 IGS_056 igs petG|trnW-CCA petG-trnW-CCA 62621 62743 0 123 LSC 0.050420 9 4 128 300 yes 1.000000 3 1.000000 0.050420 0.967480 81.700000 trnW-CCA tRNA trnW-CCA trnW-CCA 62744 62817 -1 74 LSC 0.000000 0 0 77 300 no 0.000000 1 0.000000 0.000000 1.000000 24.500000 IGS_057 igs trnW-CCA|trnP-TGG trnW-CCA-trnP-TGG 62818 62953 0 136 LSC 0.000000 0 0 151 187 no 0.000000 1 0.000000 0.000000 1.000000 30.100000 trnP-TGG tRNA trnP-TGG trnP-TGG 62954 63027 -1 74 LSC 0.000000 0 0 287 113 no 0.000000 1 0.000000 0.000000 1.000000 27.200000 IGS_058 igs trnP-TGG|psaJ trnP-TGG-psaJ 63028 63412 0 385 LSC 0.018182 8 11 300 300 yes 1.000000 3 1.000000 0.009600 1.000000 68.300000 psaJ gene psaJ psaJ 63413 63541 1 129 LSC 0.000000 0 0 141 178 no 0.000000 1 0.000000 0.000000 1.000000 29.300000 IGS_059 igs psaJ|rpl33 psaJ-rpl33 63542 63891 0 350 LSC 0.001910 1 1 270 300 no 0.333333 2 0.500000 0.001910 0.997143 42.500000 rpl33 gene rpl33 rpl33 63892 64092 1 201 LSC 0.000000 0 0 171 144 no 0.000000 1 0.000000 0.000000 1.000000 29.500000 IGS_060 igs rpl33|rps18 rpl33-rps18 64093 64364 0 272 LSC 0.012392 5 5 300 94 no 1.000000 3 1.000000 0.012438 0.988971 54.300000 rps18 gene rps18 rps18 64365 64856 1 492 LSC 0.002710 2 0 103 300 no 1.000000 3 1.000000 0.002710 1.000000 51.000000 IGS_061 igs rps18|rpl20 rps18-rpl20 64857 65078 0 222 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rpl20 gene rpl20 rpl20 65079 65438 -1 360 LSC 0.000000 0 0 300 244 no 0.000000 1 0.000000 0.000000 1.000000 35.000000 IGS_062 igs rpl20|rps12 rpl20-rps12 65439 66123 0 685 LSC 0.004895 5 4 300 45 no 1.000000 3 1.000000 0.004895 0.994161 50.800000 rps12_part1 gene rps12 rps12 66124 66240 -1 117 LSC 0.005698 1 0 80 93 no 0.333333 2 0.500000 0.005698 1.000000 34.600000 IGS_063 igs rps12|clpP rps12-clpP 66241 66373 0 133 LSC 0.005013 1 0 71 300 no 0.333333 2 0.500000 0.005013 1.000000 33.500000 clpP gene clpP clpP 66374 67024 -1 651 LSC 0.000000 0 0 39 76 no 0.000000 1 0.000000 0.000000 1.000000 27.900000 IGS_064 igs clpP|psbB clpP-psbB 67025 67541 0 517 LSC 0.001289 1 0 300 300 no 0.333333 2 0.500000 0.001289 1.000000 45.300000 psbB gene psbB psbB 67542 69068 1 1527 LSC 0.000000 0 0 300 254 no 0.000000 1 0.000000 0.000000 1.000000 39.900000 IGS_065 igs psbB|psbT psbB-psbT 69069 69233 0 165 LSC 0.000000 0 6 300 89 no 0.333333 2 0.500000 0.000000 0.963636 35.000000 psbT gene psbT psbT 69234 69344 1 111 LSC 0.006006 1 0 300 56 no 0.333333 2 0.500000 0.006006 1.000000 33.000000 IGS_066 igs psbT|psbN psbT-psbN 69345 69416 0 72 LSC 0.009259 1 0 21 152 no 0.333333 2 0.500000 0.009259 1.000000 32.500000 psbN gene psbN psbN 69417 69548 -1 132 LSC 0.000000 0 0 15 20 no 0.000000 1 0.000000 0.000000 1.000000 19.900000 IGS_067 igs psbN|psbH psbN-psbH 69549 69651 0 103 LSC 0.006472 1 0 147 300 no 0.333333 2 0.500000 0.006472 1.000000 40.200000 psbH gene psbH psbH 69652 69873 1 222 LSC 0.000000 0 0 82 300 no 0.000000 1 0.000000 0.000000 1.000000 24.900000 IGS_068 igs psbH|petB psbH-petB 69874 70674 0 801 LSC 0.002954 3 12 300 36 no 1.000000 3 1.000000 0.002111 0.986267 49.600000 petB gene petB petB 70675 71373 1 699 LSC 0.001907 2 0 231 22 no 1.000000 3 1.000000 0.001907 1.000000 46.600000 IGS_069 igs petB|petD petB-petD 71374 72245 0 872 LSC 0.002294 3 0 285 300 no 0.333333 2 0.500000 0.002294 1.000000 47.700000 petD gene petD petD 72246 72770 1 525 LSC 0.000000 0 0 57 171 no 0.000000 1 0.000000 0.000000 1.000000 27.700000 IGS_070 igs petD|rpoA petD-rpoA 72771 72989 0 219 LSC 0.003086 1 3 300 300 no 0.333333 2 0.500000 0.003086 0.986301 43.200000 rpoA gene rpoA rpoA 72990 74009 -1 1020 LSC 0.001961 3 0 47 58 no 0.333333 2 0.500000 0.001961 1.000000 36.000000 IGS_071 igs rpoA|rps11 rpoA-rps11 74010 74074 0 65 LSC 0.010256 1 0 194 300 no 0.333333 2 0.500000 0.010256 1.000000 46.100000 rps11 gene rps11 rps11 74075 74506 -1 432 LSC 0.003086 2 0 6 300 no 0.333333 2 0.500000 0.003086 1.000000 30.200000 IGS_072 igs rps11|rpl36 rps11-rpl36 74507 74603 0 97 LSC 0.000000 0 1 9 300 no 0.333333 2 0.500000 0.000000 0.989691 26.600000 rpl36 gene rpl36 rpl36 74604 74717 -1 114 LSC 0.000000 0 0 106 300 no 0.000000 1 0.000000 0.000000 1.000000 26.700000 IGS_073 igs rpl36|infA rpl36-infA 74718 74817 0 100 LSC 0.000000 0 0 220 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 infA gene infA infA 74818 75141 -1 324 LSC 0.000000 0 0 300 1 no 0.000000 1 0.000000 0.000000 1.000000 19.300000 IGS_074 igs infA|rps8 infA-rps8 75142 75220 0 79 LSC 0.016878 2 0 300 300 no 0.333333 2 0.500000 0.016878 1.000000 50.800000 rps8 gene rps8 rps8 75221 75631 -1 411 LSC 0.000000 0 0 5 75 no 0.000000 1 0.000000 0.000000 1.000000 21.400000 IGS_075 igs rps8|rpl14 rps8-rpl14 75632 75770 0 139 LSC 0.004796 1 0 300 300 no 0.333333 2 0.500000 0.004796 1.000000 43.100000 rpl14 gene rpl14 rpl14 75771 76142 -1 372 LSC 0.000000 0 0 63 7 no 0.000000 1 0.000000 0.000000 1.000000 20.800000 IGS_076 igs rpl14|rpl16 rpl14-rpl16 76143 76251 0 109 LSC 0.012232 2 0 300 300 no 0.333333 2 0.500000 0.012232 1.000000 47.800000 rpl16 gene rpl16 rpl16 76252 77682 -1 1431 LSC 0.001874 4 9 36 23 no 1.000000 3 1.000000 0.001875 0.994410 47.300000 IGS_077 igs rpl16|rps3 rpl16-rps3 77683 77827 0 145 LSC 0.004598 1 0 300 192 no 0.333333 2 0.500000 0.004598 1.000000 42.300000 rps3 gene rps3 rps3 77828 78502 -1 675 LSC 0.002963 3 0 121 300 no 0.333333 2 0.500000 0.002963 1.000000 42.200000 IGS_078 igs rps3|rpl22 rps3-rpl22 78503 78567 0 65 LSC 0.000000 0 4 267 300 no 1.000000 3 1.000000 0.000000 0.969231 57.400000 rpl22 gene rpl22 rpl22 78568 79014 -1 447 LSC 0.002237 1 0 300 300 no 1.000000 3 1.000000 0.002237 1.000000 56.800000 IGS_079 igs rpl22|rps19 rpl22-rps19 79015 79106 0 92 LSC 0.000000 0 0 52 300 no 0.000000 1 0.000000 0.000000 1.000000 22.700000 rps19 gene rps19 rps19 79107 79388 -1 282 IRb 0.000000 0 0 144 300 no 0.000000 1 0.000000 0.000000 1.000000 29.500000 IGS_080 igs rps19|trnH-GTG rps19-trnH-GTG 79389 79519 0 131 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 trnH-GTG tRNA trnH-GTG trnH-GTG 79520 79593 1 74 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_081 igs trnH-GTG|rpl2 trnH-GTG-rpl2 79594 79648 0 55 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rpl2 gene rpl2 rpl2 79649 81145 -1 1497 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 40.000000 IGS_082 igs rpl2|rpl23 rpl2-rpl23 81146 81151 0 6 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rpl23 gene rpl23 rpl23 81152 81433 -1 282 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_083 igs rpl23|trnI-CAT rpl23-trnI-CAT 81434 81599 0 166 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 trnI-CAT tRNA trnI-CAT trnI-CAT 81600 81673 -1 74 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_084 igs trnI-CAT|ycf15 trnI-CAT-ycf15 81674 84235 0 2562 IRb 0.000000 0 5 300 287 no 0.333333 2 0.500000 0.000000 0.998048 44.200000 ycf15 gene ycf15 ycf15 84236 84517 1 282 IRb 0.000000 0 0 300 5 no 0.000000 1 0.000000 0.000000 1.000000 19.100000 IGS_085 igs ycf15|trnL-CAA ycf15-trnL-CAA 84518 85302 0 785 IRb 0.001699 2 0 300 300 no 0.333333 2 0.500000 0.001699 1.000000 47.300000 trnL-CAA tRNA trnL-CAA trnL-CAA 85303 85383 -1 81 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_086 igs trnL-CAA|ndhB trnL-CAA-ndhB 85384 85957 0 574 SSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 39.500000 ndhB gene ndhB ndhB 85958 88194 -1 2237 SSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 38.500000 IGS_087 igs ndhB|rps7 ndhB-rps7 88195 88495 0 301 SSC 0.000000 0 1 300 300 no 0.333333 2 0.500000 0.000000 0.996678 40.300000 rps7 gene rps7 rps7 88496 88966 -1 471 SSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 37.300000 IGS_088 igs rps7|rps12 rps7-rps12 88967 89582 0 616 SSC 0.000000 0 0 300 281 no 0.000000 1 0.000000 0.000000 1.000000 40.000000 rps12_part2 gene rps12 rps12 89583 89921 -1 339 SSC 0.001967 1 0 300 300 no 0.333333 2 0.500000 0.001967 1.000000 42.100000 IGS_089 igs rps12|ycf15 rps12-ycf15 89922 90674 0 753 SSC 0.000000 0 0 57 300 no 0.000000 1 0.000000 0.000000 1.000000 29.300000 ycf15 gene ycf15 ycf15 90675 90809 -1 135 SSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_090 igs ycf15|trnV-GAC ycf15-trnV-GAC 90810 91535 0 726 SSC 0.000000 0 8 300 300 no 0.333333 2 0.500000 0.000000 0.988981 47.300000 trnV-GAC tRNA trnV-GAC trnV-GAC 91536 91607 1 72 SSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_091 igs trnV-GAC|rrn16S trnV-GAC-rrn16S 91608 91836 0 229 SSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rrn16S rRNA rrn16S rrn16S 91837 93328 -1 1492 SSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 40.000000 IGS_092 igs rrn16S|rrn23S rrn16S-rrn23S 93329 95746 0 2418 SSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 38.100000 rrn23S rRNA rrn23S rrn23S 95747 98632 -1 2886 SSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 37.100000 IGS_093 igs rrn23S|rrn4.5S rrn23S-rrn4.5S 98633 98727 0 95 SSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rrn4.5S rRNA rrn4.5S rrn4.5S 98728 98822 -1 95 SSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_094 igs rrn4.5S|rrn5S rrn4.5S-rrn5S 98823 99054 0 232 SSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rrn5S rRNA rrn5S rrn5S 99055 99175 1 121 SSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_095 igs rrn5S|trnR-ACG rrn5S-trnR-ACG 99176 99427 0 252 SSC 0.000000 0 39 300 300 no 0.333333 2 0.500000 0.000000 0.845238 41.100000 trnR-ACG tRNA trnR-ACG trnR-ACG 99428 99501 1 74 SSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_096 igs trnR-ACG|trnN-GTT trnR-ACG-trnN-GTT 99502 99754 0 253 SSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 trnN-GTT tRNA trnN-GTT trnN-GTT 99755 99826 -1 72 SSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_097 igs trnN-GTT|ycf1 trnN-GTT-ycf1 99827 100753 0 927 SSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 40.000000 ycf1 gene ycf1 ycf1 100754 100945 1 192 SSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_098 igs ycf1|rps15 ycf1-rps15 100946 101372 0 427 SSC 0.000000 0 0 300 32 no 0.000000 1 0.000000 0.000000 1.000000 23.800000 rps15 gene rps15 rps15 101373 101645 1 273 SSC 0.002442 1 0 300 136 no 0.333333 2 0.500000 0.002442 1.000000 36.800000 IGS_099 igs rps15|ndhF rps15-ndhF 101646 101752 0 107 SSC 0.000000 0 1 240 29 no 0.333333 2 0.500000 0.000000 0.990654 28.000000 ndhF gene ndhF ndhF 101753 103969 -1 2217 SSC 0.004210 14 0 300 22 yes 1.000000 3 1.000000 0.004210 1.000000 46.600000 IGS_100 igs ndhF|rpl32 ndhF-rpl32 103970 104798 0 829 SSC 0.006441 8 1 300 258 yes 1.000000 3 1.000000 0.006441 0.998794 63.000000 rpl32 gene rpl32 rpl32 104799 104978 1 180 SSC 0.000000 0 0 300 78 no 0.000000 1 0.000000 0.000000 1.000000 24.600000 IGS_101 igs rpl32|trnL-TAG rpl32-trnL-TAG 104979 105515 0 537 SSC 0.041509 33 7 300 300 yes 0.333333 2 0.500000 0.041509 0.986965 72.500000 trnL-TAG tRNA trnL-TAG trnL-TAG 105516 105595 1 80 SSC 0.000000 0 0 123 300 no 0.000000 1 0.000000 0.000000 1.000000 28.000000 IGS_102 igs trnL-TAG|ccsA trnL-TAG-ccsA 105596 105672 0 77 SSC 0.000000 0 0 203 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 ccsA gene ccsA ccsA 105673 106641 1 969 SSC 0.006211 9 3 280 163 yes 1.000000 3 1.000000 0.006211 0.996904 60.200000 IGS_103 igs ccsA|ndhD ccsA-ndhD 106642 106664 0 23 SSC 0.000000 0 0 300 140 no 0.000000 1 0.000000 0.000000 1.000000 29.200000 ndhD gene ndhD ndhD 106665 108167 -1 1503 SSC 0.000444 1 0 300 42 no 0.333333 2 0.500000 0.000444 1.000000 34.700000 IGS_104 igs ndhD|psaC ndhD-psaC 108168 108286 0 119 SSC 0.011204 2 0 300 300 no 0.333333 2 0.500000 0.011204 1.000000 47.100000 psaC gene psaC psaC 108287 108532 -1 246 SSC 0.000000 0 0 75 192 no 0.000000 1 0.000000 0.000000 1.000000 24.400000 IGS_105 igs psaC|ndhE psaC-ndhE 108533 108999 0 467 SSC 0.014276 10 10 300 300 yes 1.000000 3 1.000000 0.014541 1.000000 67.500000 ndhE gene ndhE ndhE 109000 109305 -1 306 SSC 0.000000 0 0 99 41 no 0.000000 1 0.000000 0.000000 1.000000 21.900000 IGS_106 igs ndhE|ndhG ndhE-ndhG 109306 109519 0 214 SSC 0.003115 1 0 300 82 no 0.333333 2 0.500000 0.003115 1.000000 33.100000 ndhG gene ndhG ndhG 109520 110050 -1 531 SSC 0.002511 2 0 172 192 no 1.000000 3 1.000000 0.002511 1.000000 56.800000 IGS_107 igs ndhG|ndhI ndhG-ndhI 110051 110233 0 183 SSC 0.000000 0 0 297 9 no 0.000000 1 0.000000 0.000000 1.000000 19.400000 ndhI gene ndhI ndhI 110234 110776 -1 543 SSC 0.001228 1 0 300 300 no 0.333333 2 0.500000 0.001228 1.000000 45.800000 IGS_108 igs ndhI|ndhA ndhI-ndhA 110777 110869 0 93 SSC 0.000000 0 0 300 288 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 ndhA gene ndhA ndhA 110870 112942 -1 2073 SSC 0.001930 6 0 300 300 no 1.000000 3 1.000000 0.001930 1.000000 58.800000 IGS_109 igs ndhA|ndhH ndhA-ndhH 112943 112943 0 1 SSC 0.000000 0 0 71 300 no 0.000000 1 0.000000 NA 1.000000 24.100000 ndhH gene ndhH ndhH 112944 114125 -1 1182 SSC 0.000000 0 0 72 300 no 0.000000 1 0.000000 0.000000 1.000000 30.400000 IGS_110 igs ndhH|rps15 ndhH-rps15 114126 114259 0 134 SSC 0.000000 0 0 300 242 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rps15 gene rps15 rps15 114260 114532 -1 273 SSC 0.002442 1 0 300 300 no 0.333333 2 0.500000 0.002442 1.000000 41.600000 IGS_111 igs rps15|ycf1 rps15-ycf1 114533 114959 0 427 SSC 0.000000 0 0 30 300 no 0.000000 1 0.000000 0.000000 1.000000 23.600000 ycf1 gene ycf1 ycf1 114960 115151 -1 192 SSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_112 igs ycf1|trnN-GTT ycf1-trnN-GTT 115152 116050 0 899 SSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 40.000000 trnN-GTT tRNA trnN-GTT trnN-GTT 116051 116122 1 72 SSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_113 igs trnN-GTT|trnR-ACG trnN-GTT-trnR-ACG 116123 116375 0 253 SSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 trnR-ACG tRNA trnR-ACG trnR-ACG 116376 116449 -1 74 SSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_114 igs trnR-ACG|rrn5S trnR-ACG-rrn5S 116450 116701 0 252 SSC 0.000000 0 39 300 300 no 0.333333 2 0.500000 0.000000 0.845238 41.100000 rrn5S rRNA rrn5S rrn5S 116702 116822 -1 121 SSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_115 igs rrn5S|rrn4.5S rrn5S-rrn4.5S 116823 117054 0 232 SSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rrn4.5S rRNA rrn4.5S rrn4.5S 117055 117149 1 95 SSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_116 igs rrn4.5S|rrn23S rrn4.5S-rrn23S 117150 117244 0 95 SSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rrn23S rRNA rrn23S rrn23S 117245 120133 1 2889 SSC 0.000000 0 1 300 300 no 0.333333 2 0.500000 0.000000 0.999654 43.400000 IGS_117 igs rrn23S|rrn16S rrn23S-rrn16S 120134 122551 0 2418 SSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 38.100000 rrn16S rRNA rrn16S rrn16S 122552 124042 1 1491 SSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 40.000000 IGS_118 igs rrn16S|trnV-GAC rrn16S-trnV-GAC 124043 124271 0 229 SSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 trnV-GAC tRNA trnV-GAC trnV-GAC 124272 124343 -1 72 SSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_119 igs trnV-GAC|ycf15 trnV-GAC-ycf15 124344 125072 0 729 SSC 0.000000 0 11 300 300 no 0.333333 2 0.500000 0.000000 0.984911 47.600000 ycf15 gene ycf15 ycf15 125073 125207 1 135 SSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_120 igs ycf15|rps12 ycf15-rps12 125208 126020 0 813 SSC 0.000000 0 0 300 1 no 0.000000 1 0.000000 0.000000 1.000000 25.100000 rps12_part2 gene rps12 rps12 126021 126299 1 279 SSC 0.002389 1 0 300 300 no 0.333333 2 0.500000 0.002389 1.000000 41.500000 IGS_121 igs rps12|rps7 rps12-rps7 126300 126916 0 617 SSC 0.000000 0 1 277 300 no 0.333333 2 0.500000 0.000000 0.998379 46.400000 rps7 gene rps7 rps7 126917 127387 1 471 SSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 37.300000 IGS_122 igs rps7|ndhB rps7-ndhB 127388 127688 0 301 SSC 0.000000 0 1 300 300 no 0.333333 2 0.500000 0.000000 0.996678 40.300000 ndhB gene ndhB ndhB 127689 129924 1 2236 SSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 38.500000 IGS_123 igs ndhB|trnL-CAA ndhB-trnL-CAA 129925 130493 0 569 SSC 0.001172 1 0 300 300 no 0.333333 2 0.500000 0.001172 1.000000 46.400000 trnL-CAA tRNA trnL-CAA trnL-CAA 130494 130574 1 81 IRa 0.000000 0 0 186 300 no 0.000000 1 0.000000 0.000000 1.000000 32.700000 IGS_124 igs trnL-CAA|ycf15 trnL-CAA-ycf15 130575 131359 0 785 IRa 0.001699 2 0 267 300 no 0.333333 2 0.500000 0.001699 1.000000 47.300000 ycf15 gene ycf15 ycf15 131360 131641 -1 282 IRa 0.000000 0 0 5 300 no 0.000000 1 0.000000 0.000000 1.000000 19.100000 IGS_125 igs ycf15|trnI-CAT ycf15-trnI-CAT 131642 134203 0 2562 IRa 0.000000 0 5 287 300 no 0.333333 2 0.500000 0.000000 0.998048 44.200000 trnI-CAT tRNA trnI-CAT trnI-CAT 134204 134277 1 74 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_126 igs trnI-CAT|rpl23 trnI-CAT-rpl23 134278 134443 0 166 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rpl23 gene rpl23 rpl23 134444 134725 1 282 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_127 igs rpl23|rpl2 rpl23-rpl2 134726 134731 0 6 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rpl2 gene rpl2 rpl2 134732 136228 1 1497 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 40.000000 IGS_128 igs rpl2|trnH-GTG rpl2-trnH-GTG 136229 136283 0 55 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 trnH-GTG tRNA trnH-GTG trnH-GTG 136284 136357 -1 74 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_129 igs trnH-GTG|rps19 trnH-GTG-rps19 136358 136488 0 131 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 rps19 gene rps19 rps19 136489 136770 1 282 IRa 0.000000 0 0 300 56 no 0.000000 1 0.000000 0.000000 1.000000 22.900000 IGS_130 igs rps19|psbA rps19-psbA 136771 88 0 123 LSC 0.005420 1 0 300 168 no 0.333333 2 0.500000 0.005420 1.000000 41.100000