primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score rps16-trnQ-CAA_p1 rps16-trnQ-CAA 1 AAGTCGCACGTTGCTTTCTA GAGGTTCGAATCCTTCCGTC 20 20 45.0 55.0 58.1 58.1 8.1 16.9 0.215425 6034 6482 502-522 1.000000 83.4 rps16-trnQ-CAA_p2 rps16-trnQ-CAA 2 CCTTCAATTCAAGTCGCACG GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 57.8 58.1 0.0 16.9 0.308340 6034 6482 512-532 1.000000 82.6 rps16-trnQ-CAA_p3 rps16-trnQ-CAA 3 CCACAGCAGATCATGTCCTT GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 57.6 58.1 0.0 16.9 0.491095 6034 6482 528-548 1.000000 81.0 rps16-trnQ-CAA_p4 rps16-trnQ-CAA 4 TCCACAGCAGATCATGTCCT GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 58.4 58.1 0.0 16.9 0.499524 6034 6482 529-549 1.000000 80.9 rps16-trnQ-CAA_p5 rps16-trnQ-CAA 5 ATCCACAGCAGATCATGTCC GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 57.4 58.1 0.0 16.9 0.710916 6034 6482 530-550 1.000000 79.2 trnG-GGA-trnR-AGA_p1 trnG-GGA-trnR-AGA 1 AGCCTTCCAAGCTAACGATG TGATATTGCGTCCAATAGGA 20 20 50.0 40.0 58.0 53.9 0.0 3.0 4.105791 9215 9375 281-283 1.000000 49.1 trnG-GGA-trnR-AGA_p2 trnG-GGA-trnR-AGA 2 ACCCTTAGCCTTCCAAGCTA TGATATTGCGTCCAATAGGA 20 20 50.0 40.0 58.0 53.9 0.0 3.0 4.109107 9215 9375 287-289 1.000000 49.1 trnG-GGA-trnR-AGA_p3 trnG-GGA-trnR-AGA 3 CGACGTCGACTAAAACCCTT TGATATTGCGTCCAATAGGA 20 20 50.0 40.0 57.9 53.9 33.4 3.0 4.132047 9215 9375 301-303 1.000000 48.8 trnG-GGA-trnR-AGA_p4 trnG-GGA-trnR-AGA 4 AAACCCTTAGCCTTCCAAGC TGATATTGCGTCCAATAGGA 20 20 50.0 40.0 58.1 53.9 0.0 3.0 4.151221 9215 9375 289-291 1.000000 48.7 trnG-GGA-trnR-AGA_p5 trnG-GGA-trnR-AGA 5 AGCCTTCCAAGCTAACGATG TTGATATTGCGTCCAATAGGA 20 21 50.0 38.1 58.0 54.8 0.0 3.0 4.230351 9215 9375 282-284 1.000000 48.1 atpF-atpH_p1 atpF-atpH 1 ATTAAACCCGAAACTCCCGG TGGCCTGGTTGTAGCATTAG 20 20 50.0 50.0 57.9 57.6 0.0 3.3 0.536681 12591 13056 584-598 1.000000 76.8 atpF-atpH_p2 atpF-atpH 2 CCAGTGACCCAAGTAAACGA TGGCCTGGTTGTAGCATTAG 20 20 50.0 50.0 57.5 57.6 0.0 3.3 0.955129 12591 13056 557-571 1.000000 73.5 atpF-atpH_p3 atpF-atpH 3 ATTAAACCCGAAACTCCCGG TTTATGGCCTGGTTGTAGCA 20 20 50.0 45.0 57.9 57.1 0.0 3.3 1.007483 12591 13056 588-602 1.000000 73.0 atpF-atpH_p4 atpF-atpH 4 ATTAAACCCGAAACTCCCGG GGCCTGGTTGTAGCATTAGC 20 20 50.0 55.0 57.9 59.0 0.0 0.0 1.093272 12591 13056 583-597 1.000000 72.3 atpF-atpH_p5 atpF-atpH 5 GGCCAGTGACCCAAGTAAAC TGGCCTGGTTGTAGCATTAG 20 20 55.0 50.0 58.8 57.6 0.0 3.3 1.173552 12591 13056 559-573 1.000000 71.7 atpH-atpI_p1 atpH-atpI 1 TACCTTGACCAACTCCAGGT TACAAGCGGGATTCAAGCTC 20 20 50.0 50.0 57.9 58.0 0.0 5.7 0.136455 13303 13804 664-669 1.000000 80.9 atpH-atpI_p2 atpH-atpI 2 GTCCAATAGAAGCAAGCCCA TACAAGCGGGATTCAAGCTC 20 20 50.0 50.0 57.9 58.0 0.0 5.7 0.152946 13303 13804 646-651 1.000000 80.9 atpH-atpI_p3 atpH-atpI 3 GCTGTACCTTGACCAACTCC TACAAGCGGGATTCAAGCTC 20 20 55.0 50.0 58.2 58.0 0.0 5.7 0.214492 13303 13804 668-673 1.000000 80.3 atpH-atpI_p4 atpH-atpI 4 TACCTTGACCAACTCCAGGT TTTTTGCCACTTTAGCTGCG 20 20 50.0 45.0 57.9 57.9 0.0 0.0 0.245019 13303 13804 641-646 1.000000 80.2 atpH-atpI_p5 atpH-atpI 5 GTCCAATAGAAGCAAGCCCA TTTTTGCCACTTTAGCTGCG 20 20 50.0 45.0 57.9 57.9 0.0 0.0 0.261511 13303 13804 623-628 1.000000 80.1 rpoB-trnC-UGC_p1 rpoB-trnC-UGC 1 GTTCCCTCTTTTCCATCCCC CCGGATTTGAACTGGGGAAA 20 20 55.0 50.0 57.9 58.1 0.0 0.0 0.227525 26132 27244 1201-1209 1.000000 80.2 rpoB-trnC-UGC_p2 rpoB-trnC-UGC 2 GTTCCCTCTTTTCCATCCCC AAAAGGATTTGCAGTCCCCC 20 20 55.0 50.0 57.9 58.4 0.0 14.6 0.500888 26132 27244 1183-1191 1.000000 78.0 rpoB-trnC-UGC_p3 rpoB-trnC-UGC 3 TGTTCCCTCTTTTCCATCCC CCGGATTTGAACTGGGGAAA 20 20 50.0 50.0 57.1 58.1 0.0 0.0 0.981431 26132 27244 1202-1210 1.000000 74.1 rpoB-trnC-UGC_p4 rpoB-trnC-UGC 4 GTTCCCTCTTTTCCATCCCC AAGTCTGTTGTTGAGGCGG 20 19 55.0 52.6 57.9 58.0 0.0 0.0 1.152069 26132 27244 1223-1231 1.000000 72.7 rpoB-trnC-UGC_p5 rpoB-trnC-UGC 5 TCTTTTCCATCCCCGAGCAT CCGGATTTGAACTGGGGAAA 20 20 50.0 50.0 59.1 58.1 0.0 0.0 1.163145 26132 27244 1195-1203 1.000000 72.7 psbM-trnD-GAC_p1 psbM-trnD-GAC 1 TGCAAGAATATTGACTTCCA AATTGGTTAGAGCACCGCC 20 19 35.0 52.6 52.5 58.1 0.0 0.0 6.674132 28675 29703 1089-1111 1.000000 43.1 psbM-trnD-GAC_p2 psbM-trnD-GAC 2 TGCAAGAATATTGACTTCCA TCAATTGGTTAGAGCACCGC 20 20 35.0 50.0 52.5 58.6 0.0 5.4 6.093400 28675 29703 1091-1113 1.000000 43.0 psbM-trnD-GAC_p3 psbM-trnD-GAC 3 ATGCAAGAATATTGACTTCCA TCAATTGGTTAGAGCACCGC 21 20 33.3 50.0 53.2 58.6 0.0 5.4 6.381302 28675 29703 1092-1114 1.000000 43.0 psbM-trnD-GAC_p4 psbM-trnD-GAC 4 TGCAAGAATATTGACTTCCAT TCAATTGGTTAGAGCACCGC 21 20 33.3 50.0 53.2 58.6 0.0 5.4 6.381302 28675 29703 1091-1113 1.000000 43.0 psbM-trnD-GAC_p5 psbM-trnD-GAC 5 AATGCAAGAATATTGACTTCCA TCAATTGGTTAGAGCACCGC 22 20 31.8 50.0 54.0 58.6 0.0 5.4 6.507020 28675 29703 1093-1115 1.000000 43.0 trnD-GAC-trnY-UAC_p1 trnD-GAC-trnY-UAC 1 GCGGTGCTCTAACCAATTGA TGGCAATATGTCTACGCTGG 20 20 50.0 50.0 58.6 57.8 7.1 0.0 0.789957 29778 30215 509-515 1.000000 75.9 trnD-GAC-trnY-UAC_p2 trnD-GAC-trnY-UAC 2 GCGGTGCTCTAACCAATTGA GGCAATATGTCTACGCTGGT 20 20 50.0 50.0 58.6 57.8 7.1 0.0 0.791509 29778 30215 508-514 1.000000 75.9 trnD-GAC-trnY-UAC_p3 trnD-GAC-trnY-UAC 3 GCGGTGCTCTAACCAATTGA GGGGACGGACTGTAAATTCG 20 20 50.0 55.0 58.6 58.4 7.1 0.0 0.902511 29778 30215 530-536 1.000000 74.9 trnD-GAC-trnY-UAC_p4 trnD-GAC-trnY-UAC 4 GCGGTGCTCTAACCAATTGA GGGACGGACTGTAAATTCGT 20 20 50.0 50.0 58.6 57.6 7.1 0.0 0.926188 29778 30215 529-535 1.000000 74.7 trnD-GAC-trnY-UAC_p5 trnD-GAC-trnY-UAC 5 GCGGTGCTCTAACCAATTGA GATTCTTCCTGGGTCGATGC 20 20 50.0 55.0 58.6 58.4 7.1 0.0 0.963468 29778 30215 563-569 1.000000 74.3 trnE-GAA-trnT-ACC_p1 trnE-GAA-trnT-ACC 1 TTTCGTAGTACCCTACCCCC GAACCGATGACTTACGCCTT 20 20 55.0 50.0 57.8 58.0 0.0 0.0 0.165150 30432 31091 801-957 1.000000 80.1 trnE-GAA-trnT-ACC_p2 trnE-GAA-trnT-ACC 2 TTTCGTAGTACCCTACCCCC CCATGGCGTTACTCTACCAC 20 20 55.0 55.0 57.8 58.1 0.0 0.0 0.223247 30432 31091 780-936 1.000000 79.7 trnE-GAA-trnT-ACC_p3 trnE-GAA-trnT-ACC 3 TTTCGTAGTACCCTACCCCC TGGCGTTACTCTACCACTGA 20 20 55.0 50.0 57.8 58.1 0.0 0.0 0.245401 30432 31091 777-933 1.000000 79.5 trnE-GAA-trnT-ACC_p4 trnE-GAA-trnT-ACC 4 GCTGCCTCCTTGAAAGAGAG GAACCGATGACTTACGCCTT 20 20 55.0 50.0 58.3 58.0 0.0 0.0 0.269359 30432 31091 763-919 1.000000 79.4 trnE-GAA-trnT-ACC_p5 trnE-GAA-trnT-ACC 5 TGTCCTGAACCACTAGACGA GAACCGATGACTTACGCCTT 20 20 50.0 50.0 57.7 58.0 0.0 0.0 0.287509 30432 31091 742-898 1.000000 79.3 psaA-ycf3_p1 psaA-ycf3 1 GCCCATTCCTCGAAAGAAGT ATTGGTTGACGATCACGAGG 20 20 50.0 50.0 57.9 58.0 4.1 0.0 0.125488 41494 42210 829-835 1.000000 80.3 psaA-ycf3_p2 psaA-ycf3 2 AGAAATGACCGGGTTTAGCC ATTGGTTGACGATCACGAGG 20 20 50.0 50.0 57.9 58.0 6.3 0.0 0.134422 41494 42210 846-852 1.000000 80.2 psaA-ycf3_p3 psaA-ycf3 3 GCCCATTCCTCGAAAGAAGT AGCACAGAATTGGTTGACGA 20 20 50.0 45.0 57.9 57.7 4.1 0.0 0.369889 41494 42210 837-843 1.000000 78.4 psaA-ycf3_p4 psaA-ycf3 4 GCCCATTCCTCGAAAGAAGT AGCCGCTGAGTATTGGAAAC 20 20 50.0 50.0 57.9 58.3 4.1 0.0 0.376276 41494 42210 891-897 1.000000 78.2 psaA-ycf3_p5 psaA-ycf3 5 GCCCATTCCTCGAAAGAAGT CAAGCCGCTGAGTATTGGAA 20 20 50.0 50.0 57.9 58.3 4.1 0.0 0.377504 41494 42210 893-899 1.000000 78.2 accD_p1 accD 1 CCATCCTGCATGTTGTCCTT AAGAAGCCATTGCAATTGCC 20 20 50.0 45.0 58.2 57.9 0.0 26.8 0.260169 56576 57793 2233-2495 1.000000 80.7 accD_p2 accD 2 GGCTTGAACCAAGTATCCCC AAGAAGCCATTGCAATTGCC 20 20 55.0 45.0 58.2 57.9 8.3 26.8 0.339569 56576 57793 2264-2526 1.000000 80.1 accD_p3 accD 3 GGGCTTGAACCAAGTATCCC AAGAAGCCATTGCAATTGCC 20 20 55.0 45.0 58.2 57.9 8.3 26.8 0.339569 56576 57793 2265-2527 1.000000 80.1 accD_p4 accD 4 CCATCCTGCATGTTGTCCTT CCGGAAAGACTAGGCCTACT 20 20 50.0 55.0 58.2 58.2 0.0 8.9 0.378691 56576 57793 2215-2477 1.000000 79.8 accD_p5 accD 5 CCATCCTGCATGTTGTCCTT TGCAATTGCCGGAAAGACTA 20 20 50.0 45.0 58.2 57.8 0.0 26.9 0.349295 56576 57793 2223-2223 0.500000 57.2 rps11-rpl36_p1 rps11-rpl36 1 CGTGAACCACTACGTGTATT ATCCGTAGAAGGGGACGAAT 20 20 45.0 50.0 55.5 57.9 0.0 0.0 2.537005 78145 78263 241-245 1.000000 61.0 rps11-rpl36_p2 rps11-rpl36 2 CGTGAACCACTACGTGTATT AATCCGTAGAAGGGGACGAA 20 20 45.0 50.0 55.5 58.1 0.0 0.0 2.596748 78145 78263 242-246 1.000000 60.5 rps11-rpl36_p3 rps11-rpl36 3 CGTGAACCACTACGTGTATT TCCGTAGAAGGGGACGAATT 20 20 45.0 50.0 55.5 58.1 0.0 0.0 2.596748 78145 78263 240-244 1.000000 60.5 rps11-rpl36_p4 rps11-rpl36 4 CGTGAACCACTACGTGTATT GTTCCAACCCGAGGCATAAA 20 20 45.0 50.0 55.5 58.2 0.0 0.0 2.624398 78145 78263 210-214 1.000000 60.5 rps11-rpl36_p5 rps11-rpl36 5 CGTGAACCACTACGTGTATT TTCCAACCCGAGGCATAAAC 20 20 45.0 50.0 55.5 58.2 0.0 0.0 2.624398 78145 78263 209-213 1.000000 60.5 rpl16-rps3_p1 rpl16-rps3 1 AACGAGTCACACACTAAGCA AAAATTTGGATATTCGTAGACG 20 22 45.0 31.8 57.1 52.7 0.0 0.0 8.163676 81499 81672 225-229 1.000000 45.6 rpl16-rps3_p2 rpl16-rps3 2 AACGAGTCACACACTAAGCA AAAAATTTGGATATTCGTAGACG 20 23 45.0 30.4 57.1 53.6 0.0 0.0 8.329662 81499 81672 226-230 1.000000 45.6 rpl16-rps3_p3 rpl16-rps3 3 ACCAACGAGTCACACACTAAG AAAATTTGGATATTCGTAGACG 21 22 47.6 31.8 57.9 52.7 0.0 0.0 8.374466 81499 81672 228-232 1.000000 45.6 rpl16-rps3_p4 rpl16-rps3 4 AAACCAACGAGTCACACACT AAAATTTGGATATTCGTAGACG 20 22 45.0 31.8 57.6 52.7 0.0 0.0 7.677338 81499 81672 230-234 1.000000 45.5 rpl16-rps3_p5 rpl16-rps3 5 AAACCAACGAGTCACACACT AAAAATTTGGATATTCGTAGACG 20 23 45.0 30.4 57.6 53.6 0.0 0.0 7.843325 81499 81672 231-235 1.000000 45.5 ndhF-rpl32_p1 ndhF-rpl32 1 TCCATGAATATTGATATGTATGTTCCA ACGATGTCCAATATCCCTTCC 27 21 29.6 47.6 56.7 57.2 0.0 0.0 10.024661 111416 112024 722-923 1.000000 43.8 ndhF-rpl32_p2 ndhF-rpl32 2 CCATGAATATTGATATGTATGTTCCA ACGATGTCCAATATCCCTTCC 26 21 30.8 47.6 55.5 57.2 0.0 0.0 10.263220 111416 112024 721-922 1.000000 43.8 ndhF-rpl32_p3 ndhF-rpl32 3 TCCATGAATATTGATATGTATGTTCCA CGATGTCCAATATCCCTTCCT 27 21 29.6 47.6 56.7 56.9 0.0 0.0 10.310777 111416 112024 721-922 1.000000 43.8 ndhF-rpl32_p4 ndhF-rpl32 4 TCCATGAATATTGATATGTATGTTCCA AACGATGTCCAATATCCCTTCC 27 22 29.6 45.5 56.7 57.9 0.0 0.0 10.339790 111416 112024 723-924 1.000000 43.8 ndhF-rpl32_p5 ndhF-rpl32 5 TCCATGAATATTGATATGTATGTTCCA AAGCTTTCAACGATGTCCAA 27 20 29.6 40.0 56.7 55.9 0.0 0.0 10.375075 111416 112024 731-932 1.000000 43.8 rpl32-trnL-CUA_p1 rpl32-trnL-CUA 1 GGGGACAATAAAAAGCACGC TGCAGACTGAGGCATTTTGT 20 20 50.0 45.0 58.0 58.0 0.0 6.7 0.023728 112184 113066 2142-2142 0.500000 59.8 rpl32-trnL-CUA_p2 rpl32-trnL-CUA 2 GGGGACAATAAAAAGCACGC TCGAACCGAGATGCTTTAGC 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.086630 112184 113066 1632-1632 0.500000 59.3 rpl32-trnL-CUA_p3 rpl32-trnL-CUA 3 GGGGACAATAAAAAGCACGC TCCTAAGAGCAGCGTGTCTA 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.133478 112184 113066 1606-1606 0.500000 58.9 rpl32-trnL-CUA_p4 rpl32-trnL-CUA 4 GGGGACAATAAAAAGCACGC AGCAGCGTGTCTACCAATTT 20 20 50.0 45.0 58.0 57.8 0.0 0.0 0.194205 112184 113066 1599-1599 0.500000 58.4 rpl32-trnL-CUA_p5 rpl32-trnL-CUA 5 GGGGACAATAAAAAGCACGC CTAAGAGCAGCGTGTCTACC 20 20 50.0 55.0 58.0 57.8 0.0 0.0 0.205496 112184 113066 1604-1604 0.500000 58.4 rps15-ycf1_p1 rps15-ycf1 1 TCAACAGATCCCCTGCTTTC ACACATGTATACGCGATTTCCA 20 22 50.0 40.9 57.5 58.2 0.0 15.9 2.709113 122331 122654 417-434 1.000000 61.1 rps15-ycf1_p2 rps15-ycf1 2 CAACAGATCCCCTGCTTTCT ACACATGTATACGCGATTTCCA 20 22 50.0 40.9 57.5 58.2 0.0 15.9 2.716109 122331 122654 416-433 1.000000 61.1 rps15-ycf1_p3 rps15-ycf1 3 TCAACAGATCCCCTGCTTTC CACATGTATACGCGATTTCCA 20 21 50.0 42.9 57.5 56.5 0.0 15.9 2.979880 122331 122654 416-433 1.000000 59.0 rps15-ycf1_p4 rps15-ycf1 4 TCAACAGATCCCCTGCTTTC ACACATGTATACGCGATTTCC 20 21 50.0 42.9 57.5 56.5 0.0 15.9 2.982092 122331 122654 417-434 1.000000 59.0 rps15-ycf1_p5 rps15-ycf1 5 CAACAGATCCCCTGCTTTCT CACATGTATACGCGATTTCCA 20 21 50.0 42.9 57.5 56.5 0.0 15.9 2.986876 122331 122654 415-432 1.000000 58.9 ycf1_p1 ycf1 1 TGGTATGATCCACGGTTTGA ATTGAGCCCTGGGTTGATAC 20 20 45.0 50.0 56.5 57.3 0.0 15.6 2.191903 123761 123880 240-240 1.000000 65.8 ycf1_p2 ycf1 2 TGATTGGTATGATCCACGGT ATTGAGCCCTGGGTTGATAC 20 20 45.0 50.0 56.3 57.3 0.0 15.6 2.425151 123761 123880 244-244 1.000000 63.9 ycf1_p3 ycf1 3 TTGGTATGATCCACGGTTTGA ATTGAGCCCTGGGTTGATAC 21 20 42.9 50.0 57.3 57.3 0.0 15.6 2.441470 123761 123880 241-241 1.000000 63.8 ycf1_p4 ycf1 4 TGGTATGATCCACGGTTTGA GCCCTGGGTTGATACCAAG 20 19 45.0 57.9 56.5 57.8 0.0 15.6 2.646415 123761 123880 235-235 1.000000 62.2 ycf1_p5 ycf1 5 TGGTATGATCCACGGTTTGA AGCCCTGGGTTGATACCAA 20 19 45.0 52.6 56.5 58.2 0.0 15.6 2.655657 123761 123880 236-236 1.000000 62.1