primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score ycf37_p1 ycf37 1 CCACTTTTAGTTCTCATTCTTGCT ATGCAGTAGGATGGGTACGT 24 20 37.5 50.0 57.4 58.2 0.0 0.0 4.776674 6700 7212 1201-1201 0.500000 23.9 ycf37_p2 ycf37 2 TGCATTCATAATTGTTTGTCCACT ATGCAGTAGGATGGGTACGT 24 20 33.3 50.0 57.7 58.2 0.0 0.0 4.554194 6700 7212 1220-1220 0.250000 13.6 ycf37_p3 ycf37 3 TGCATTCATAATTGTTTGTCCACT TGTGATGCAGTAGGATGGGT 24 20 33.3 50.0 57.7 58.4 0.0 0.0 4.760160 6700 7212 1224-1224 0.250000 11.9 ycf37_p4 ycf37 4 TCCACTTTTAGTTCTCATTCTTGC ATGCAGTAGGATGGGTACGT 24 20 37.5 50.0 57.4 58.2 0.0 0.0 4.770730 6700 7212 1202-1202 0.250000 11.8 ycf37_p5 ycf37 5 TGCATTCATAATTGTTTGTCCACT TGCAGTAGGATGGGTACGTA 24 20 33.3 50.0 57.7 57.6 0.0 0.0 4.784233 6700 7212 1219-1219 0.250000 11.7 ycf55_p1 ycf55 1 TGTCCTACTGGAGCTTCTGT AGTTTTGACTAGCAGCAGCA 20 20 50.0 45.0 57.7 57.7 9.7 3.2 0.571623 15475 16422 1793-1793 0.250000 45.4 ycf55_p2 ycf55 2 TGTCCTACTGGAGCTTCTGT TTGACTAGCAGCAGCAAAGT 20 20 50.0 45.0 57.7 57.7 9.7 3.2 0.571623 15475 16422 1789-1789 0.250000 45.4 ycf55_p3 ycf55 3 TGTCCTACTGGAGCTTCTGT CTGGACTTGGAGCTGCATTT 20 20 50.0 50.0 57.7 58.5 9.7 9.4 0.768287 15475 16422 2294-2294 0.250000 43.9 ycf55_p4 ycf55 4 TGTCCTACTGGAGCTTCTGT GGACTTGGAGCTGCATTTGT 20 20 50.0 50.0 57.7 58.7 9.7 9.4 1.059528 15475 16422 2292-2292 0.250000 41.5 ycf55_p5 ycf55 5 TGTCCTACTGGAGCTTCTGT TGGACTTGGAGCTGCATTTG 20 20 50.0 50.0 57.7 58.7 9.7 9.4 1.060451 15475 16422 2293-2293 0.250000 41.5 trnL-trnN_p1 trnL-trnN 1 TAGCGTGTCTGCCAATTTCA CTACCACTGAGCTACTGAGGA 20 21 45.0 52.4 57.8 58.0 0.0 11.2 1.183505 23385 23511 159-178 1.000000 82.5 trnL-trnN_p2 trnL-trnN 2 TAGCGTGTCTGCCAATTTCA TCTACCACTGAGCTACTGAGG 20 21 45.0 52.4 57.8 58.0 0.0 0.0 1.183505 23385 23511 160-179 1.000000 82.5 trnL-trnN_p3 trnL-trnN 3 TAGCGTGTCTGCCAATTTCA ACCAATCGGTTAACAGCCG 20 19 45.0 52.6 57.8 58.2 0.0 8.1 1.328313 23385 23511 184-203 1.000000 81.4 trnL-trnN_p4 trnL-trnN 4 TAGCGTGTCTGCCAATTTCA TACCACTGAGCTACTGAGGA 20 20 45.0 50.0 57.8 56.8 0.0 11.2 1.373578 23385 23511 158-177 1.000000 81.0 trnL-trnN_p5 trnL-trnN 5 GTGTCTGCCAATTTCACCAC CTACCACTGAGCTACTGAGGA 20 21 50.0 52.4 57.6 58.0 0.0 11.2 1.428387 23385 23511 155-174 1.000000 80.6 dsbD_p1 dsbD 1 GGTTCAAATCCTTCCTGGGG TAAACTTCCAACGTCGTGCA 20 20 55.0 45.0 58.1 58.1 0.0 0.0 0.210089 23624 24361 1223-1223 0.250000 48.3 dsbD_p2 dsbD 2 ATTTCACCACGTCCGCTTTA TAAACTTCCAACGTCGTGCA 20 20 45.0 45.0 57.8 58.1 0.0 0.0 0.235573 23624 24361 1416-1416 0.250000 48.1 dsbD_p3 dsbD 3 TTTCACCACGTCCGCTTTAT TAAACTTCCAACGTCGTGCA 20 20 45.0 45.0 57.8 58.1 0.0 0.0 0.235573 23624 24361 1415-1415 0.250000 48.1 dsbD_p4 dsbD 4 TAGCGTGTCTGCCAATTTCA TAAACTTCCAACGTCGTGCA 20 20 45.0 45.0 57.8 58.1 0.0 0.0 0.240116 23624 24361 1430-1430 0.250000 48.1 dsbD_p5 dsbD 5 TTCACCACGTCCGCTTTATC TAAACTTCCAACGTCGTGCA 20 20 50.0 45.0 58.3 58.1 0.0 0.0 0.345528 23624 24361 1414-1414 0.250000 47.2 tilS_p1 tilS 1 GGTGCACCTCTATGTCCTTG GCGGATACCTGTTACACCTG 20 20 55.0 55.0 58.0 58.1 29.1 0.0 0.093906 33085 34065 2250-2250 0.250000 49.2 tilS_p2 tilS 2 GCACCTCTATGTCCTTGTCG GCGGATACCTGTTACACCTG 20 20 55.0 55.0 58.1 58.1 0.0 0.0 0.136173 33085 34065 2247-2247 0.250000 48.9 tilS_p3 tilS 3 ATGGTGCACCTCTATGTCCT GCGGATACCTGTTACACCTG 20 20 50.0 55.0 58.1 58.1 34.8 0.0 0.179018 33085 34065 2252-2252 0.250000 48.6 tilS_p4 tilS 4 GGTGCACCTCTATGTCCTTG CTCGAACCCGGAACTAATCG 20 20 55.0 55.0 58.0 58.2 29.1 0.7 0.193455 33085 34065 1640-1640 0.250000 48.5 tilS_p5 tilS 5 GCACCTCTATGTCCTTGTCG CTCGAACCCGGAACTAATCG 20 20 55.0 55.0 58.1 58.2 0.0 0.7 0.235722 33085 34065 1637-1637 0.250000 48.1 psaC-ycf22_p1 psaC-ycf22 1 AAATTGCTTCAGCGCCTAGA CGAGGATCATCAAACCTCTGA 20 21 45.0 47.6 57.9 57.2 2.3 8.3 1.922327 46925 47899 1639-1643 0.500000 48.7 psaC-ycf22_p2 psaC-ycf22 2 AATTGCTTCAGCGCCTAGAA CGAGGATCATCAAACCTCTGA 20 21 45.0 47.6 57.9 57.2 2.3 8.3 1.922327 46925 47899 1638-1642 0.500000 48.7 psaC-ycf22_p3 psaC-ycf22 3 AATTGCTTCAGCGCCTAGAA TCGAGGATCATCAAACCTCTG 20 21 45.0 47.6 57.9 57.2 2.3 8.3 1.922327 46925 47899 1639-1643 0.500000 48.7 psaC-ycf22_p4 psaC-ycf22 4 CAGGTCAAATTGCTTCAGCG CGAGGATCATCAAACCTCTGA 20 21 50.0 47.6 58.0 57.2 0.0 8.3 1.835328 46925 47899 1645-1645 0.250000 35.3 psaC-ycf22_p5 psaC-ycf22 5 CAGGTCAAATTGCTTCAGCG TCGAGGATCATCAAACCTCTG 20 21 50.0 47.6 58.0 57.2 0.0 8.3 1.835328 46925 47899 1646-1646 0.250000 35.3 ssrA_p1 ssrA 1 ACTTTGGTGGTCGAAGGTTC TCAGACATAATAACTTGGCGCT 20 22 50.0 40.9 58.0 57.9 0.0 7.6 2.173944 55012 55448 1314-1325 0.500000 44.9 ssrA_p2 ssrA 2 GACTTTGGTGGTCGAAGGTT TCAGACATAATAACTTGGCGCT 20 22 50.0 40.9 58.0 57.9 0.0 7.6 2.173944 55012 55448 1315-1326 0.500000 44.9 ssrA_p3 ssrA 3 ACTTTGGTGGTCGAAGGTTC ACAATTCTTTGGCGTTTCACT 20 21 50.0 38.1 58.0 56.9 0.0 0.0 2.112348 55012 55448 772-783 0.500000 44.3 ssrA_p4 ssrA 4 GACTTTGGTGGTCGAAGGTT ACAATTCTTTGGCGTTTCACT 20 21 50.0 38.1 58.0 56.9 0.0 0.0 2.112348 55012 55448 773-784 0.500000 44.3 ssrA_p5 ssrA 5 CTTTGGTGGTCGAAGGTTCA ACAATTCTTTGGCGTTTCACT 20 21 50.0 38.1 58.0 56.9 0.0 0.0 2.113727 55012 55448 771-782 0.500000 44.3 ycf4_p1 ycf4 1 AAAATATCCGTGGGCCATGC TCCAGCCAGATGCAATTCAA 20 20 50.0 45.0 59.0 57.8 20.7 0.0 1.179224 64869 65417 1335-1337 0.500000 52.7 ycf4_p2 ycf4 2 AAAATATCCGTGGGCCATGC CCCGCATCATTAGCTTGGAA 20 20 50.0 50.0 59.0 58.3 20.7 0.0 1.281004 64869 65417 1250-1251 0.500000 51.4 ycf4_p3 ycf4 3 AAAATATCCGTGGGCCATGC ATCCAGCCAGATGCAATTCA 20 20 50.0 45.0 59.0 57.6 20.7 0.0 1.407552 64869 65417 1336-1338 0.500000 50.8 ycf4_p4 ycf4 4 AAATATCCGTGGGCCATGC TCCAGCCAGATGCAATTCAA 19 20 52.6 45.0 58.3 57.8 20.7 0.0 1.486791 64869 65417 1334-1336 0.500000 50.2 ycf4_p5 ycf4 5 AAAATATCCGTGGGCCATGC ATCGAACCCGCATCATTAGC 20 20 50.0 50.0 59.0 58.5 20.7 0.0 1.447217 64869 65417 1256-1257 0.500000 50.1 orf5_p1 orf5 1 TTCCAAGCTAATGATGCGGG CGGACTCATGTGTGATTCGT 20 20 50.0 50.0 58.3 58.0 0.0 4.9 0.324569 65782 66873 1875-2013 0.750000 79.4 orf5_p2 orf5 2 TTGAATTGCATCTGGCTGGA CGGACTCATGTGTGATTCGT 20 20 45.0 50.0 57.8 58.0 0.0 4.9 0.222789 65782 66873 1927-1928 0.500000 60.9 orf5_p3 orf5 3 TTGAATTGCATCTGGCTGGA AGCGGACTCATGTGTGATTC 20 20 45.0 50.0 57.8 58.0 0.0 4.9 0.234816 65782 66873 1929-1930 0.500000 60.8 orf5_p4 orf5 4 CCCGCTACCCGCTTTAATAA CGGACTCATGTGTGATTCGT 20 20 50.0 50.0 57.8 58.0 0.0 4.9 0.247310 65782 66873 1986-1986 0.250000 48.0 orf5_p5 orf5 5 CCCGCTACCCGCTTTAATAA AGCGGACTCATGTGTGATTC 20 20 50.0 50.0 57.8 58.0 0.0 4.9 0.259338 65782 66873 1988-1988 0.250000 47.9 orf5-cemA_p1 orf5-cemA 1 TTTGCTTTCCATTCTGGCTT TCCTTCAGCTGTTGCAACAT 20 20 40.0 45.0 56.1 58.0 0.0 31.2 1.908531 66874 67598 1072-1073 0.500000 46.2 orf5-cemA_p2 orf5-cemA 2 TTTTGCTTTCCATTCTGGCT TCCTTCAGCTGTTGCAACAT 20 20 40.0 45.0 56.1 58.0 0.0 31.2 1.908531 66874 67598 1073-1074 0.500000 46.2 orf5-cemA_p3 orf5-cemA 3 TTTTGCTTTCCATTCTGGCTT TCCTTCAGCTGTTGCAACAT 21 20 38.1 45.0 56.9 58.0 0.0 31.2 2.136779 66874 67598 1073-1074 0.500000 44.4 orf5-cemA_p4 orf5-cemA 4 TTTTTGCTTTCCATTCTGGCT TCCTTCAGCTGTTGCAACAT 21 20 38.1 45.0 56.9 58.0 0.0 31.2 2.136779 66874 67598 1074-1075 0.500000 44.4 orf5-cemA_p5 orf5-cemA 5 GTTTTTGCTTTCCATTCTGGC TCCTTCAGCTGTTGCAACAT 21 20 42.9 45.0 56.8 58.0 0.0 31.2 2.169863 66874 67598 1075-1076 0.500000 44.1 ycf58_p1 ycf58 1 TGCTTCAATCTCAGCATTTGG TTCAGGTAGACGTGCAAAAA 21 20 42.9 40.0 57.1 55.5 0.0 0.0 4.330678 68619 69083 1467-1493 0.750000 45.3 ycf58_p2 ycf58 2 TGCTTCAATCTCAGCATTTGG TTTCAGGTAGACGTGCAAAA 21 20 42.9 40.0 57.1 55.5 0.0 0.0 4.330678 68619 69083 1468-1494 0.750000 45.3 ycf58_p3 ycf58 3 TGCTTCAATCTCAGCATTTGG TTTCAGGTAGACGTGCAAAAA 21 21 42.9 38.1 57.1 56.3 0.0 0.0 4.544330 68619 69083 1468-1494 0.750000 43.6 ycf58_p4 ycf58 4 TGCAGCAATTTCTAATGCCT TTCAGGTAGACGTGCAAAAA 20 20 40.0 40.0 56.0 55.5 0.0 0.0 4.487784 68619 69083 1800-1802 0.500000 26.9 ycf58_p5 ycf58 5 TGCAGCAATTTCTAATGCCT TTTCAGGTAGACGTGCAAAA 20 20 40.0 40.0 56.0 55.5 0.0 0.0 4.487784 68619 69083 1801-1803 0.500000 26.9 Orf4_p1 Orf4 1 CCTAATTTCGCCACCTACCC TCAAAAACAGCATCAACGGC 20 20 55.0 45.0 58.0 57.9 0.0 0.0 0.169568 70676 71368 1277-1285 0.500000 61.5 Orf4_p2 Orf4 2 CCTAATTTCGCCACCTACCC AATTCTAATGGGCAGCGTGT 20 20 55.0 45.0 58.0 57.9 0.0 0.0 0.165598 70676 71368 1499-1507 0.500000 61.3 Orf4_p3 Orf4 3 CCTAATTTCGCCACCTACCC AAAACAGCATCAACGGCAAC 20 20 55.0 45.0 58.0 58.1 0.0 0.0 0.185169 70676 71368 1274-1282 0.500000 61.3 Orf4_p4 Orf4 4 CCTAATTTCGCCACCTACCC CAAAAACAGCATCAACGGCA 20 20 55.0 45.0 58.0 58.1 0.0 0.0 0.186451 70676 71368 1276-1284 0.500000 61.3 Orf4_p5 Orf4 5 TATTAGCTCTGCACCCCACT AATTCTAATGGGCAGCGTGT 20 20 50.0 45.0 58.1 57.9 0.0 0.0 0.249196 70676 71368 1779-1787 0.500000 60.5 accB_p1 accB 1 ACTCAGGACCATCAGGGAAA AATCGTGAGCATCTGCATGT 20 20 50.0 45.0 58.0 58.0 0.0 4.8 0.078897 112163 112648 1414-1414 0.250000 49.4 accB_p2 accB 2 ACTCAGGACCATCAGGGAAA GAAAACCACCTCCAACGTCT 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.081621 112163 112648 1645-1645 0.250000 49.3 accB_p3 accB 3 ACTCAGGACCATCAGGGAAA CACCTTGAAAACCACCTCCA 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.110691 112163 112648 1651-1651 0.250000 49.1 accB_p4 accB 4 ACTCAGGACCATCAGGGAAA ACACCTTGAAAACCACCTCC 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.112158 112163 112648 1652-1652 0.250000 49.1 accB_p5 accB 5 ACTCAGGACCATCAGGGAAA TGCCATCGAGATTCTCCTCT 20 20 50.0 50.0 58.0 57.9 0.0 8.1 0.123962 112163 112648 1245-1245 0.250000 49.0 dnaB_p1 dnaB 1 TCAGTCCACTGCTCTACCAA TGCAGAAATAGCAACAAACA 20 20 50.0 35.0 58.0 54.0 1.5 0.0 4.000759 148730 150556 2325-2325 0.250000 18.0 dnaB_p2 dnaB 2 TCCACTGCTCTACCAACTGA TGCAGAAATAGCAACAAACA 20 20 50.0 35.0 58.0 54.0 0.0 0.0 4.000759 148730 150556 2321-2321 0.250000 18.0 dnaB_p3 dnaB 3 TTCAGTCCACTGCTCTACCA TGCAGAAATAGCAACAAACA 20 20 50.0 35.0 58.0 54.0 1.5 0.0 4.000759 148730 150556 2326-2326 0.250000 18.0 dnaB_p4 dnaB 4 ACTGAGCTATCCCGGCTAAT TGCAGAAATAGCAACAAACA 20 20 50.0 35.0 58.0 54.0 0.0 0.0 4.007982 148730 150556 2306-2306 0.250000 17.9 dnaB_p5 dnaB 5 AGTCCACTGCTCTACCAACT TGCAGAAATAGCAACAAACA 20 20 50.0 35.0 58.0 54.0 0.0 0.0 4.007982 148730 150556 2323-2323 0.250000 17.9 moeB_p1 moeB 1 TGTTTGTTGCTATTTCTGCA AGAACAGAAGCTGGAGGAGT 20 20 35.0 50.0 54.0 58.0 0.0 0.0 4.013795 151216 152301 1936-1946 0.500000 30.1 moeB_p2 moeB 2 TGTTTGTTGCTATTTCTGCA CTACAAGCTGTACCGCGAAT 20 20 35.0 50.0 54.0 58.1 0.0 8.2 4.068507 151216 152301 2104-2114 0.500000 29.7 moeB_p3 moeB 3 TGTTTGTTGCTATTTCTGCA ACCAACCTTATCCGCTGTTC 20 20 35.0 50.0 54.0 57.9 0.0 0.0 4.100502 151216 152301 1856-1866 0.500000 29.5 moeB_p4 moeB 4 TGTTTGTTGCTATTTCTGCA ATAAACACGCCCTGAAGGAC 20 20 35.0 50.0 54.0 57.9 0.0 0.0 4.100502 151216 152301 1508-1508 0.500000 29.0 moeB_p5 moeB 5 TGTTTGTTGCTATTTCTGCA GGAAACCTACGTTCTGCCAA 20 20 35.0 50.0 54.0 58.1 0.0 0.0 4.104191 151216 152301 1465-1465 0.500000 29.0 rps1_p1 rps1 1 CGCGTATGATGGAGTCACAA ATTTCTGTGGCACGATCCTC 20 20 50.0 50.0 58.1 58.0 0.0 13.8 0.108595 157333 158127 1268-1283 1.000000 88.1 rps1_p2 rps1 2 GGAGTCACAATCCATTGCCT ATTTCTGTGGCACGATCCTC 20 20 50.0 50.0 57.9 58.0 0.0 13.8 0.164627 157333 158127 1258-1273 1.000000 87.6 rps1_p3 rps1 3 TTATTGAGGGCGAATGACGG ATTTCTGTGGCACGATCCTC 20 20 50.0 50.0 58.1 58.0 0.0 13.8 0.081734 157333 158127 1298-1307 0.750000 77.9 rps1_p4 rps1 4 TTATTGAGGGCGAATGACGG ACGTACCATTGCACCCTTAC 20 20 50.0 50.0 58.1 57.9 0.0 0.0 0.155433 157333 158127 1336-1345 0.750000 77.3 rps1_p5 rps1 5 TTATTGAGGGCGAATGACGG AATAGAGCCCGGACTTTCCT 20 20 50.0 50.0 58.1 58.1 0.0 0.7 0.170955 157333 158127 1237-1246 0.750000 77.2 syfB_p1 syfB 1 GAGGATCGTGCCACAGAAAT CGAATCCTCCTACCCCAGAT 20 20 50.0 55.0 58.0 58.0 0.0 0.0 0.046743 158561 160549 2876-2889 1.000000 88.8 syfB_p2 syfB 2 AGGAAAGTCCGGGCTCTATT CGAATCCTCCTACCCCAGAT 20 20 50.0 55.0 58.1 58.0 10.2 0.0 0.135964 158561 160549 2937-2950 1.000000 88.1 syfB_p3 syfB 3 GAGGATCGTGCCACAGAAAT GGTGTAGCCAAGTGGTAAGG 20 20 50.0 55.0 58.0 57.9 0.0 0.0 0.139263 158561 160549 2927-2940 1.000000 88.0 syfB_p4 syfB 4 GAGGATCGTGCCACAGAAAT CTAACTCGATCTCGCGATGG 20 20 50.0 55.0 58.0 58.0 0.0 10.4 0.072750 158561 160549 2676-2677 0.750000 78.1 syfB_p5 syfB 5 GTAAGGGTGCAATGGTACGT CGAATCCTCCTACCCCAGAT 20 20 50.0 55.0 57.9 58.0 0.0 0.0 0.120442 158561 160549 2846-2847 0.500000 61.2