Pi
0.0135
MarkerSeek score
60.30
Primer available
yes
Label
trnI-CAU
Feature Metadata
Pi Curve
Haplotype Network
Species Separation
Primer Ranking
| Primer ID | fwd_seq | rev_seq | fwd_gc | rev_gc | fwd_tm | rev_tm | amplicon_size | cross_species_success_rate | primer_score |
|---|---|---|---|---|---|---|---|---|---|
| trnI-CAU_p1 | AGACTTATTGGAGGGTCCCA | TCACCATGTACGAGGATCCC | 50.0 | 55.0 | 57.3 | 58.6 | 126 bp | 1.0 | 70.6 |
| trnI-CAU_p2 | CTTATTGGAGGGTCCCATTGG | TCACCATGTACGAGGATCCC | 52.4 | 55.0 | 58.1 | 58.6 | 123 bp | 1.0 | 67.5 |
| trnI-CAU_p3 | TTATTGGAGGGTCCCATTGG | TCACCATGTACGAGGATCCC | 50.0 | 55.0 | 56.9 | 58.6 | 122 bp | 1.0 | 66.8 |
| trnI-CAU_p4 | AGACTTATTGGAGGGTCCCAT | TCACCATGTACGAGGATCCC | 47.6 | 55.0 | 57.8 | 58.6 | 126 bp | 1.0 | 66.7 |
| trnI-CAU_p5 | AGACTTATTGGAGGGTCCCA | ACCATGTACGAGGATCCCC | 50.0 | 57.9 | 57.3 | 58.2 | 124 bp | 1.0 | 66.0 |
| trnI-CAU_p1 | TCACCATGTACGAGGATCCC | AGACTTATTGGAGGGTCCCA | 55.0 | 50.0 | 58.6 | 57.3 | 126 bp | 1.0 | 70.6 |
| trnI-CAU_p2 | TCACCATGTACGAGGATCCC | CTTATTGGAGGGTCCCATTGG | 55.0 | 52.4 | 58.6 | 58.1 | 123 bp | 1.0 | 67.5 |
| trnI-CAU_p3 | TCACCATGTACGAGGATCCC | TTATTGGAGGGTCCCATTGG | 55.0 | 50.0 | 58.6 | 56.9 | 122 bp | 1.0 | 66.8 |
| trnI-CAU_p4 | TCACCATGTACGAGGATCCC | AGACTTATTGGAGGGTCCCAT | 55.0 | 47.6 | 58.6 | 57.8 | 126 bp | 1.0 | 66.7 |
| trnI-CAU_p5 | ACCATGTACGAGGATCCCC | AGACTTATTGGAGGGTCCCA | 57.9 | 50.0 | 58.2 | 57.3 | 124 bp | 1.0 | 66.0 |