primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score psbA-rbcL_p1 psbA-rbcL 1 TACAGAAGCGACCCCATAGG ATTTGAGTTTGCCGCAATGG 20 20 55.0 45.0 58.6 57.9 0.0 6.6 0.673162 1474 2535 1098-1148 1.000000 80.7 psbA-rbcL_p2 psbA-rbcL 2 TACAGAAGCGACCCCATAGG GCTGCTTGTGAGGTATGGAA 20 20 55.0 50.0 58.6 57.9 0.0 0.0 0.703856 1474 2535 1127-1177 1.000000 80.4 psbA-rbcL_p3 psbA-rbcL 3 TACAGAAGCGACCCCATAGG TGAGTTTGCCGCAATGGATA 20 20 55.0 45.0 58.6 57.9 0.0 6.6 0.711287 1474 2535 1095-1145 1.000000 80.4 psbA-rbcL_p4 psbA-rbcL 4 TACAGAAGCGACCCCATAGG AGTTTGCCGCAATGGATACT 20 20 55.0 45.0 58.6 57.9 0.0 6.6 0.718766 1474 2535 1093-1143 1.000000 80.3 psbA-rbcL_p5 psbA-rbcL 5 ATCCAGTTACAGAAGCGACC ATTTGAGTTTGCCGCAATGG 20 20 50.0 45.0 57.3 57.9 0.0 6.6 0.757962 1474 2535 1105-1155 1.000000 80.0 trnM (CAU)-trnV (UAC)_p1 trnM (CAU)-trnV (UAC) 1 CCCGCCGTATGAAAGCAATA ACCAACTGAGCTATAGCCCT 20 20 50.0 50.0 58.4 57.8 0.0 21.2 0.593842 6927 7123 251-261 1.000000 80.9 trnM (CAU)-trnV (UAC)_p2 trnM (CAU)-trnV (UAC) 2 CCCGCCGTATGAAAGCAATA TTGCATGATGGACTCCCTTG 20 20 50.0 50.0 58.4 57.9 0.0 0.0 0.544607 6927 7123 305-315 1.000000 80.3 trnM (CAU)-trnV (UAC)_p3 trnM (CAU)-trnV (UAC) 3 CCCGCCGTATGAAAGCAATA TGATTGCATGATGGACTCCC 20 20 50.0 50.0 58.4 57.6 0.0 0.0 0.764682 6927 7123 308-318 1.000000 78.5 trnM (CAU)-trnV (UAC)_p4 trnM (CAU)-trnV (UAC) 4 CCGCCGTATGAAAGCAATAC TTGCATGATGGACTCCCTTG 20 20 50.0 50.0 57.3 57.9 0.0 0.0 0.796560 6927 7123 304-314 1.000000 78.3 trnM (CAU)-trnV (UAC)_p5 trnM (CAU)-trnV (UAC) 5 CCCGCCGTATGAAAGCAATA GCATGATGGACTCCCTTGAA 20 20 50.0 50.0 58.4 57.6 0.0 0.0 0.836469 6927 7123 303-313 1.000000 78.0 rps16-ORF243_p1 rps16-ORF243 1 AGCGAACATCAATTGCAACG AAAAAGTACGAACCGGTGCT 20 20 45.0 45.0 58.0 58.0 0.0 8.5 0.074570 11546 11707 546-547 1.000000 89.0 rps16-ORF243_p2 rps16-ORF243 2 AGCGAACATCAATTGCAACG GCCCTCCAAGCGAATCTAAA 20 20 45.0 50.0 58.0 58.0 0.0 0.0 0.070625 11546 11707 370-370 0.500000 59.4 rps16-ORF243_p3 rps16-ORF243 3 AGCGAACATCAATTGCAACG ACGTTGGATTTTGTCACGGA 20 20 45.0 45.0 58.0 58.0 0.0 0.0 0.075942 11546 11707 297-297 0.500000 59.4 rps16-ORF243_p4 rps16-ORF243 4 GCGAACATCAATTGCAACGA GCCCTCCAAGCGAATCTAAA 20 20 45.0 50.0 58.0 58.0 0.0 0.0 0.075975 11546 11707 369-369 0.500000 59.4 rps16-ORF243_p5 rps16-ORF243 5 TGCTTTCTACCACAGCGTTT GCCCTCCAAGCGAATCTAAA 20 20 45.0 50.0 58.0 58.0 0.0 0.0 0.076593 11546 11707 332-332 0.500000 59.4 ORF243_p1 ORF243 1 AGCGAACATCAATTGCAACG CAAAGATTGCTGCGGGAAAG 20 20 45.0 50.0 58.0 58.0 0.0 2.7 0.045540 11708 12439 2014-2294 1.000000 91.6 ORF243_p2 ORF243 2 GCGAACATCAATTGCAACGA CAAAGATTGCTGCGGGAAAG 20 20 45.0 50.0 58.0 58.0 0.0 2.7 0.050890 11708 12439 2013-2293 1.000000 91.6 ORF243_p3 ORF243 3 TGCTTTCTACCACAGCGTTT CAAAGATTGCTGCGGGAAAG 20 20 45.0 50.0 58.0 58.0 0.0 2.7 0.051509 11708 12439 1976-2256 1.000000 91.6 ORF243_p4 ORF243 4 TTGCTTTCTACCACAGCGTT CAAAGATTGCTGCGGGAAAG 20 20 45.0 50.0 58.0 58.0 0.0 2.7 0.051509 11708 12439 1977-2257 1.000000 91.6 ORF243_p5 ORF243 5 AGCGAACATCAATTGCAACG GGCAAATCGTCCCAATTTCG 20 20 45.0 50.0 58.0 58.1 0.0 0.0 0.124173 11708 12439 1242-1242 0.500000 59.0 ORF243-trnQ (UUG)_p1 ORF243-trnQ (UUG) 1 AGCGAACATCAATTGCAACG CAAAGATTGCTGCGGGAAAG 20 20 45.0 50.0 58.0 58.0 0.0 2.7 0.045540 12440 12775 2014-2294 1.000000 91.6 ORF243-trnQ (UUG)_p2 ORF243-trnQ (UUG) 2 GCGAACATCAATTGCAACGA CAAAGATTGCTGCGGGAAAG 20 20 45.0 50.0 58.0 58.0 0.0 2.7 0.050890 12440 12775 2013-2293 1.000000 91.6 ORF243-trnQ (UUG)_p3 ORF243-trnQ (UUG) 3 TGCTTTCTACCACAGCGTTT CAAAGATTGCTGCGGGAAAG 20 20 45.0 50.0 58.0 58.0 0.0 2.7 0.051509 12440 12775 1976-2256 1.000000 91.6 ORF243-trnQ (UUG)_p4 ORF243-trnQ (UUG) 4 TTGCTTTCTACCACAGCGTT CAAAGATTGCTGCGGGAAAG 20 20 45.0 50.0 58.0 58.0 0.0 2.7 0.051509 12440 12775 1977-2257 1.000000 91.6 ORF243-trnQ (UUG)_p5 ORF243-trnQ (UUG) 5 TTTAGATTCGCTTGGAGGGC CAAAGATTGCTGCGGGAAAG 20 20 50.0 50.0 58.0 58.0 0.0 2.7 0.051689 12440 12775 1944-1944 0.500000 59.6 trnQ (UUG)-psbK_p1 trnQ (UUG)-psbK 1 CTTACCACTCGGCTACGC ACAGATACAGATCAAACTTAAAAGA 18 25 61.1 28.0 57.6 54.5 0.0 0.0 10.919762 12848 13462 604-670 1.000000 49.3 trnQ (UUG)-psbK_p2 trnQ (UUG)-psbK 2 CTTACCACTCGGCTACGC AACAGATACAGATCAAACTTAAAAGA 18 26 61.1 26.9 57.6 55.2 0.0 0.0 11.228991 12848 13462 605-671 1.000000 49.3 trnQ (UUG)-psbK_p3 trnQ (UUG)-psbK 3 CTTACCACTCGGCTACGC ACAGATACAGATCAAACTTAAAAG 18 24 61.1 29.2 57.6 53.1 0.0 0.0 11.311587 12848 13462 604-670 1.000000 49.3 trnQ (UUG)-psbK_p4 trnQ (UUG)-psbK 4 CGCCTTACCACTCGGCTA ACAGATACAGATCAAACTTAAAAGA 18 25 61.1 28.0 58.8 54.5 0.0 0.0 11.319467 12848 13462 607-673 1.000000 49.3 trnQ (UUG)-psbK_p5 trnQ (UUG)-psbK 5 GCCTTACCACTCGGCTAC ACAGATACAGATCAAACTTAAAAGA 18 25 61.1 28.0 57.2 54.5 0.0 0.0 11.352496 12848 13462 606-672 1.000000 49.3 rpoC2-rpoC1_p1 rpoC2-rpoC1 1 TGTGAAAGACCAGATTGGCC GCGAAATCGAAGAGGCCATA 20 20 50.0 50.0 58.1 58.1 0.0 5.0 0.224435 26616 26781 253-253 1.000000 80.7 rpoC2-rpoC1_p2 rpoC2-rpoC1 2 TGTGAAAGACCAGATTGGCC GAGGCCATACAGGGGTTTTC 20 20 50.0 55.0 58.1 58.2 0.0 5.0 0.326332 26616 26781 242-242 1.000000 80.0 rpoC2-rpoC1_p3 rpoC2-rpoC1 3 TGTGAAAGACCAGATTGGCC TATCGCGAAATCGAAGAGGC 20 20 50.0 50.0 58.1 58.2 0.0 15.2 0.323012 26616 26781 257-257 1.000000 79.9 rpoC2-rpoC1_p4 rpoC2-rpoC1 4 TGTGAAAGACCAGATTGGCC TTTCCCAGGCCTGTTCCTAT 20 20 50.0 50.0 58.1 58.3 0.0 30.6 0.409072 26616 26781 226-226 1.000000 79.6 rpoC2-rpoC1_p5 rpoC2-rpoC1 5 TGTGAAAGACCAGATTGGCC TTTTCCCAGGCCTGTTCCTA 20 20 50.0 50.0 58.1 58.5 0.0 30.6 0.638851 26616 26781 227-227 1.000000 77.7 rpoC1-rpoB_p1 rpoC1-rpoB 1 TGTTGCGGAGAAACTAATCCA TTGGCTCTGGAACTGAATCA 21 20 42.9 45.0 57.6 56.7 0.0 0.0 2.661290 29589 29631 168-168 1.000000 60.1 rpoC1-rpoB_p2 rpoC1-rpoB 2 TGTTGCGGAGAAACTAATCCA TCTTTGGCTCTGGAACTGAA 21 20 42.9 45.0 57.6 56.7 0.0 0.0 2.733493 29589 29631 171-171 1.000000 59.5 rpoC1-rpoB_p3 rpoC1-rpoB 3 TGTTGCGGAGAAACTAATCCA TGGCTCTGGAACTGAATCAT 21 20 42.9 45.0 57.6 56.5 0.0 0.0 2.894652 29589 29631 167-167 1.000000 58.3 rpoC1-rpoB_p4 rpoC1-rpoB 4 TGTTGCGGAGAAACTAATCCA TTTGGCTCTGGAACTGAATCA 21 21 42.9 42.9 57.6 57.5 0.0 0.0 2.917792 29589 29631 169-169 1.000000 58.1 rpoC1-rpoB_p5 rpoC1-rpoB 5 TGTTGCGGAGAAACTAATCCA TGGCTCTGGAACTGAATCATT 21 21 42.9 42.9 57.6 57.3 0.0 0.0 3.137188 29589 29631 167-167 1.000000 56.3 ORF310_p1 ORF310 1 CCTGATCGATGAACCTGCAA GCCGCCAAAATCATCCAAAA 20 20 50.0 45.0 58.0 57.9 0.5 0.0 0.120272 33324 34256 1882-2037 1.000000 87.9 ORF310_p2 ORF310 2 AGTCCCGCGGATACATAGAA GCCGCCAAAATCATCCAAAA 20 20 50.0 45.0 58.0 57.9 30.7 0.0 0.100731 33324 34256 2051-2206 1.000000 87.8 ORF310_p3 ORF310 3 AGTCCCGCGGATACATAGAA GCACCTATTACCGCACTTGA 20 20 50.0 50.0 58.0 58.0 30.7 0.0 0.027421 33324 34256 1857-1857 0.500000 59.8 ORF310_p4 ORF310 4 CCTGATCGATGAACCTGCAA GCACCTATTACCGCACTTGA 20 20 50.0 50.0 58.0 58.0 0.5 0.0 0.046962 33324 34256 1688-1688 0.500000 59.6 ORF310_p5 ORF310 5 GTATGTGGTAGGGCGAAAGG GCACCTATTACCGCACTTGA 20 20 55.0 50.0 58.1 58.0 0.0 0.0 0.069077 33324 34256 1401-1401 0.500000 59.4 ORF310-trnC (GCA)_p1 ORF310-trnC (GCA) 1 GACCAAAACCCAACCCTGAT GGTGCAGAGTCAAAAAGGGA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.028425 34257 34787 1205-1284 1.000000 88.6 ORF310-trnC (GCA)_p2 ORF310-trnC (GCA) 2 ATTTCGTAGACGTCCTTGGC TTAAAGCAGCCCAAGCAAGA 20 20 50.0 45.0 58.0 58.0 13.0 0.0 0.012015 34257 34787 1117-1117 0.500000 59.9 ORF310-trnC (GCA)_p3 ORF310-trnC (GCA) 3 GACCAAAACCCAACCCTGAT TTAAAGCAGCCCAAGCAAGA 20 20 50.0 45.0 58.0 58.0 0.0 0.0 0.015725 34257 34787 1387-1387 0.500000 59.9 ORF310-trnC (GCA)_p4 ORF310-trnC (GCA) 4 ATTTCGTAGACGTCCTTGGC GGTGCAGAGTCAAAAAGGGA 20 20 50.0 50.0 58.0 58.0 13.0 0.0 0.024714 34257 34787 1014-1014 0.500000 59.8 ORF310-trnC (GCA)_p5 ORF310-trnC (GCA) 5 ATGGCGTCTGGTTTGTTTCT TTAAAGCAGCCCAAGCAAGA 20 20 45.0 45.0 58.0 58.0 0.0 0.0 0.024788 34257 34787 1543-1543 0.500000 59.8 ndhC-ORF225_p1 ndhC-ORF225 1 CTAGAAAGTTTCTCCGGCCC CTCGGGCAAAGTCGAATACA 20 20 55.0 50.0 58.0 58.0 21.2 0.0 0.030171 56919 57357 969-1027 1.000000 91.1 ndhC-ORF225_p2 ndhC-ORF225 2 CTAGAAAGTTTCTCCGGCCC CACTCGGGCAAAGTCGAATA 20 20 55.0 50.0 58.0 58.0 21.2 0.0 0.030171 56919 57357 971-1029 1.000000 91.0 ndhC-ORF225_p3 ndhC-ORF225 3 CTAGAAAGTTTCTCCGGCCC ACTCGGGCAAAGTCGAATAC 20 20 55.0 50.0 58.0 58.0 21.2 0.0 0.031559 56919 57357 970-1028 1.000000 91.0 ndhC-ORF225_p4 ndhC-ORF225 4 TCTCACTAAAGAAGGGGCCA CACTCGGGCAAAGTCGAATA 20 20 50.0 50.0 58.0 58.0 4.4 0.0 0.043445 56919 57357 1529-1587 1.000000 87.5 ndhC-ORF225_p5 ndhC-ORF225 5 TCTCACTAAAGAAGGGGCCA CTCGGGCAAAGTCGAATACA 20 20 50.0 50.0 58.0 58.0 4.4 0.0 0.043445 56919 57357 1527-1585 1.000000 87.5 ORF225_p1 ORF225 1 CTAGAAAGTTTCTCCGGCCC TCGACAGAAGCTGCTTCATC 20 20 55.0 50.0 58.0 58.0 21.2 35.8 0.027401 57358 58035 1541-1541 0.500000 59.8 ORF225_p2 ORF225 2 CTAGAAAGTTTCTCCGGCCC CGACAGAAGCTGCTTCATCT 20 20 55.0 50.0 58.0 58.0 21.2 35.8 0.032949 57358 58035 1540-1540 0.500000 59.7 ORF225_p3 ORF225 3 AAAGCAGAAGCATAGACGCA TCGACAGAAGCTGCTTCATC 20 20 45.0 50.0 57.9 58.0 0.0 35.8 0.100953 57358 58035 1426-1426 0.500000 59.2 ORF225_p4 ORF225 4 AAACAACAAAGGAGGCCCAT TCGACAGAAGCTGCTTCATC 20 20 45.0 50.0 57.9 58.0 0.0 35.8 0.103452 57358 58035 997-997 0.500000 59.2 ORF225_p5 ORF225 5 AAAGCAGAAGCATAGACGCA CGACAGAAGCTGCTTCATCT 20 20 45.0 50.0 57.9 58.0 0.0 35.8 0.106501 57358 58035 1425-1425 0.500000 59.1 rpl16-rps3_p1 rpl16-rps3 1 AAACCAACGAGTCACACACT CGAACTATTTCTGGGATATTAGGC 20 24 45.0 41.7 57.6 57.0 0.0 0.0 5.366418 81116 81280 248-249 1.000000 43.5 rpl16-rps3_p2 rpl16-rps3 2 AAACCAACGAGTCACACACT TCGAACTATTTCTGGGATATTAGGC 20 25 45.0 40.0 57.6 58.3 0.0 0.0 5.698210 81116 81280 249-250 1.000000 43.5 rpl16-rps3_p3 rpl16-rps3 3 TGCGAAGTGATGAATTGGGT CGAACTATTTCTGGGATATTAGGC 20 24 45.0 41.7 57.8 57.0 0.0 0.0 5.168655 81116 81280 323-325 1.000000 42.7 rpl16-rps3_p4 rpl16-rps3 4 TGCGAAGTGATGAATTGGGT TCGAACTATTTCTGGGATATTAGGC 20 25 45.0 40.0 57.8 58.3 0.0 0.0 5.500447 81116 81280 324-326 1.000000 42.7 rpl16-rps3_p5 rpl16-rps3 5 TGCGAAGTGATGAATTGGGT CGAACTATTTCTGGGATATTAGGCA 20 25 45.0 40.0 57.8 58.5 0.0 0.0 5.734605 81116 81280 323-325 1.000000 42.7 rpl23-trnI (CAU)_p1 rpl23-trnI (CAU) 1 TTTCCCCAATAACCGACGAC CCTGTTAAGCATCCATGGCT 20 20 50.0 50.0 57.9 57.9 0.0 7.0 0.160650 84607 85357 535-890 1.000000 87.3 rpl23-trnI (CAU)_p2 rpl23-trnI (CAU) 2 CCCCAATAACCGACGACTTT CCTGTTAAGCATCCATGGCT 20 20 50.0 50.0 57.9 57.9 0.0 7.0 0.166508 84607 85357 532-887 1.000000 87.3 rpl23-trnI (CAU)_p3 rpl23-trnI (CAU) 3 AACCGACGACTTTTGTCTGT CCTGTTAAGCATCCATGGCT 20 20 45.0 50.0 57.7 57.9 0.0 7.0 0.367722 84607 85357 525-880 1.000000 85.7 rpl23-trnI (CAU)_p4 rpl23-trnI (CAU) 4 TTTCCCCAATAACCGACGAC ACGAGGATCCCTGTTAAGCA 20 20 50.0 50.0 57.9 58.4 0.0 8.6 0.529176 84607 85357 544-899 1.000000 84.3 rpl23-trnI (CAU)_p5 rpl23-trnI (CAU) 5 CCCCAATAACCGACGACTTT ACGAGGATCCCTGTTAAGCA 20 20 50.0 50.0 57.9 58.4 0.0 8.6 0.535033 84607 85357 541-896 1.000000 84.3 trnI (CAU)-rpl23_p1 trnI (CAU)-rpl23 1 CCTGTTAAGCATCCATGGCT TTTCCCCAATAACCGACGAC 20 20 50.0 50.0 57.9 57.9 7.0 0.0 0.160650 162475 163225 535-890 1.000000 87.3 trnI (CAU)-rpl23_p2 trnI (CAU)-rpl23 2 CCTGTTAAGCATCCATGGCT CCCCAATAACCGACGACTTT 20 20 50.0 50.0 57.9 57.9 7.0 0.0 0.166508 162475 163225 532-887 1.000000 87.3 trnI (CAU)-rpl23_p3 trnI (CAU)-rpl23 3 CCTGTTAAGCATCCATGGCT AACCGACGACTTTTGTCTGT 20 20 50.0 45.0 57.9 57.7 7.0 0.0 0.367722 162475 163225 525-880 1.000000 85.7 trnI (CAU)-rpl23_p4 trnI (CAU)-rpl23 4 ACGAGGATCCCTGTTAAGCA TTTCCCCAATAACCGACGAC 20 20 50.0 50.0 58.4 57.9 8.6 0.0 0.529176 162475 163225 544-899 1.000000 84.3 trnI (CAU)-rpl23_p5 trnI (CAU)-rpl23 5 ACGAGGATCCCTGTTAAGCA CCCCAATAACCGACGACTTT 20 20 50.0 50.0 58.4 57.9 8.6 0.0 0.535033 162475 163225 541-896 1.000000 84.3