feature_id feature_type parent_gene label_name start end strand length_bp region pi variable_sites indel_sites conserved_left_bp conserved_right_bp primer_available species_resolution unique_haplotype_count species_specific_haplotype_ratio interspecific_divergence alignment_reliability markerseek_score trnH-GUG tRNA trnH-GUG trnH-GUG 1 68 -1 68 LSC 0.011868 4 0 8 2 no 0.157895 5 0.600000 0.011868 1.000000 34.600000 IGS_001 igs trnH-GUG|psbA trnH-GUG-psbA 69 167 0 99 LSC 0.290966 79 86 20 3 no 0.894737 18 0.944444 0.277467 0.888889 70.500000 psbA gene psbA psbA 168 1229 -1 1062 LSC 0.063679 271 1049 0 1 yes 0.894737 18 0.944444 0.072430 1.000000 80.400000 IGS_002 igs psbA|trnQ-UUG psbA-trnQ-UUG 1230 1896 0 667 LSC 0.286918 478 610 9 5 yes 0.894737 18 0.944444 0.280619 0.728636 73.800000 trnQ-UUG tRNA trnQ-UUG trnQ-UUG 1897 1968 -1 72 LSC 0.029077 7 0 1 0 no 0.421053 11 0.727273 0.029077 1.000000 51.900000 IGS_003 igs trnQ-UUG|psbK trnQ-UUG-psbK 1969 2310 0 342 LSC 0.276174 260 319 4 3 no 0.894737 18 0.944444 0.264191 0.932749 70.800000 psbK gene psbK psbK 2311 2490 1 180 LSC 0.126062 84 69 6 2 no 0.894737 18 0.944444 0.128463 1.000000 76.200000 IGS_004 igs psbK|psbI psbK-psbI 2491 2763 0 273 LSC 0.223752 197 273 1 3 no 0.894737 18 0.944444 0.226978 0.948718 70.000000 psbI gene psbI psbI 2764 2877 1 114 LSC 0.095145 46 61 0 1 no 0.894737 18 0.944444 0.094664 1.000000 75.900000 IGS_005 igs psbI|trnS-GCU psbI-trnS-GCU 2878 2912 0 35 LSC 0.185972 20 28 5 30 no 0.789474 17 0.882353 0.180665 1.000000 73.100000 trnS-GCU tRNA trnS-GCU trnS-GCU 2913 3000 -1 88 LSC 0.033028 13 0 6 2 no 0.473684 12 0.750000 0.033028 1.000000 55.100000 IGS_006 igs trnS-GCU|trnR-UCU trnS-GCU-trnR-UCU 3001 3237 0 237 LSC 0.280211 190 163 4 4 no 0.894737 18 0.944444 0.269705 0.911392 71.200000 trnR-UCU tRNA trnR-UCU trnR-UCU 3238 3309 1 72 LSC 0.019493 7 0 0 6 no 0.263158 8 0.625000 0.019493 1.000000 44.600000 IGS_007 igs trnR-UCU|atpA trnR-UCU-atpA 3310 3407 0 98 LSC 0.245112 68 90 0 3 no 0.894737 18 0.944444 0.244035 0.979592 70.700000 atpA gene atpA atpA 3408 4931 -1 1524 LSC 0.085921 507 18 3 1 no 0.894737 18 0.944444 0.085579 1.000000 78.200000 IGS_008 igs atpA|atpF atpA-atpF 4932 5002 0 71 LSC 0.164597 39 50 5 2 no 0.894737 18 0.944444 0.157525 1.000000 74.100000 atpF gene atpF atpF 5003 5545 -1 543 LSC 0.139791 309 6 1 1 no 0.894737 18 0.944444 0.139929 1.000000 77.000000 IGS_009 igs atpF|atpH atpF-atpH 5546 5742 0 197 LSC 0.256129 163 163 5 5 no 0.894737 18 0.944444 0.252184 0.969543 73.400000 atpH gene atpH atpH 5743 5988 -1 246 LSC 0.065445 57 0 0 6 no 0.894737 18 0.944444 0.065445 1.000000 70.500000 IGS_010 igs atpH|atpI atpH-atpI 5989 6234 0 246 LSC 0.242663 185 186 9 1 no 0.894737 18 0.944444 0.236015 0.971545 72.100000 atpI gene atpI atpI 6235 6978 -1 744 LSC 0.086697 253 0 1 0 no 0.894737 18 0.944444 0.086697 1.000000 76.800000 IGS_011 igs atpI|rps2 atpI-rps2 6979 7048 0 70 LSC 0.282393 53 48 4 2 no 0.894737 18 0.944444 0.210184 0.842857 69.500000 rps2 gene rps2 rps2 7049 7759 -1 711 LSC 0.090143 274 27 1 2 yes 0.894737 18 0.944444 0.089260 1.000000 81.500000 IGS_012 igs rps2|trnC-GCA rps2-trnC-GCA 7760 8987 0 1228 LSC 0.273362 827 1171 4 25 yes 0.894737 18 0.944444 0.335518 0.688111 73.200000 trnC-GCA tRNA trnC-GCA trnC-GCA 8988 9059 1 72 LSC 0.024935 10 0 0 0 no 0.368421 10 0.700000 0.024935 1.000000 49.400000 IGS_013 igs trnC-GCA|petN trnC-GCA-petN 9060 9439 0 380 LSC 0.276319 299 336 32 3 no 0.894737 18 0.944444 0.298905 0.836842 70.400000 petN gene petN petN 9440 9535 1 96 LSC 0.089243 32 31 0 2 no 0.894737 18 0.944444 0.093479 0.937500 74.000000 IGS_014 igs petN|psbM petN-psbM 9536 9882 0 347 LSC 0.283489 280 274 0 0 no 0.894737 18 0.944444 0.285234 0.959654 72.700000 psbM gene psbM psbM 9883 9987 -1 105 LSC 0.079952 34 25 2 0 no 0.789474 17 0.882353 0.080922 1.000000 74.300000 IGS_015 igs psbM|trnD-GUC psbM-trnD-GUC 9988 10081 0 94 LSC 0.207956 65 86 3 7 no 0.894737 18 0.944444 0.210304 1.000000 73.700000 trnD-GUC tRNA trnD-GUC trnD-GUC 10082 10155 -1 74 LSC 0.032243 13 0 0 0 no 0.421053 11 0.727273 0.032243 1.000000 53.700000 IGS_016 igs trnD-GUC|trnY-GUA trnD-GUC-trnY-GUA 10156 10212 0 57 LSC 0.342225 48 53 19 30 no 0.894737 18 0.944444 0.315379 0.982456 71.700000 trnY-GUA tRNA trnY-GUA trnY-GUA 10213 10296 -1 84 LSC 0.019284 9 0 0 2 no 0.368421 10 0.700000 0.019284 1.000000 46.800000 IGS_017 igs trnY-GUA|trnE-UUC trnY-GUA-trnE-UUC 10297 10354 0 58 LSC 0.249419 45 37 26 16 no 0.894737 18 0.944444 0.254054 1.000000 75.000000 trnE-UUC tRNA trnE-UUC trnE-UUC 10355 10427 -1 73 LSC 0.029801 6 1 2 0 no 0.315789 12 0.500000 0.029845 1.000000 50.000000 IGS_018 igs trnE-UUC|trnT-GGU trnE-UUC-trnT-GGU 10428 10694 0 267 LSC 0.331423 225 244 20 15 no 0.894737 18 0.944444 0.338962 0.921348 70.700000 trnT-GGU tRNA trnT-GGU trnT-GGU 10695 10766 1 72 LSC 0.016975 8 0 0 0 no 0.315789 8 0.750000 0.016975 1.000000 44.800000 IGS_019 igs trnT-GGU|psbD trnT-GGU-psbD 10767 11436 0 670 LSC 0.257983 490 654 56 23 yes 0.894737 18 0.944444 0.261787 0.928358 77.600000 psbD gene psbD psbD 11437 12498 1 1062 LSC 0.055377 254 839 6 2 yes 0.894737 18 0.944444 0.063468 1.000000 80.900000 psbC gene psbC psbC 12446 13867 1 1422 LSC 0.067325 373 1121 15 2 yes 0.894737 18 0.944444 0.075997 0.999297 80.900000 IGS_021 igs psbC|trnS-UGA psbC-trnS-UGA 13868 13988 0 121 LSC 0.238147 86 120 1 4 no 0.894737 18 0.944444 0.231441 0.975207 72.300000 trnS-UGA tRNA trnS-UGA trnS-UGA 13989 14076 -1 88 LSC 0.020061 11 2 4 0 no 0.368421 10 0.700000 0.019761 1.000000 50.000000 IGS_022 igs trnS-UGA|psbZ trnS-UGA-psbZ 14077 14181 0 105 LSC 0.200776 74 75 51 3 no 0.894737 18 0.944444 0.197295 0.980952 74.400000 psbZ gene psbZ psbZ 14182 14370 1 189 LSC 0.095575 77 47 1 0 no 0.894737 18 0.944444 0.097189 1.000000 76.200000 IGS_023 igs psbZ|trnG-GCC psbZ-trnG-GCC 14371 14543 0 173 LSC 0.194745 120 158 1 8 no 0.894737 18 0.944444 0.187714 0.976879 72.600000 trnG-GCC tRNA trnG-GCC trnG-GCC 14544 14614 1 71 LSC 0.041759 13 0 7 1 no 0.736842 16 0.875000 0.041759 1.000000 63.900000 IGS_024 igs trnG-GCC|trnfM-CAU trnG-GCC-trnfM-CAU 14615 14692 0 78 LSC 0.281500 65 67 0 22 no 0.789474 17 0.882353 0.287288 0.987179 68.400000 trnfM-CAU tRNA trnfM-CAU trnfM-CAU 14693 14766 -1 74 LSC 0.019757 9 0 2 2 no 0.315789 9 0.666667 0.019757 1.000000 46.200000 IGS_025 igs trnfM-CAU|rps14 trnfM-CAU-rps14 14767 14870 0 104 LSC 0.207413 66 64 5 0 no 0.894737 18 0.944444 0.225255 0.894231 70.700000 rps14 gene rps14 rps14 14871 15173 -1 303 LSC 0.082605 108 0 0 7 no 0.894737 18 0.944444 0.082605 1.000000 70.600000 IGS_026 igs rps14|psaB rps14-psaB 15174 15268 0 95 LSC 0.185271 58 54 6 3 no 0.894737 18 0.944444 0.165613 0.978947 74.000000 psaB gene psaB psaB 15269 17473 -1 2205 LSC 0.063580 569 2142 0 5 no 0.894737 18 0.944444 0.074777 1.000000 78.600000 IGS_027 igs psaB|psaA psaB-psaA 17474 17489 0 16 LSC 0.080055 6 16 4 6 no 0.263158 9 0.555556 NA 1.000000 61.700000 psaA gene psaA psaA 17490 19724 -1 2235 LSC 0.067249 612 2090 0 0 no 0.894737 18 0.944444 0.079300 0.999553 78.400000 IGS_028 igs psaA|ycf3 psaA-ycf3 19725 20071 0 347 LSC 0.256174 250 347 17 3 no 0.894737 18 0.944444 0.265932 0.927954 70.800000 ycf3 gene ycf3 ycf3 20072 20578 -1 507 LSC 0.070643 150 507 1 0 no 0.789474 17 0.882353 0.070663 1.000000 75.800000 IGS_029 igs ycf3|trnS-GGA ycf3-trnS-GGA 20579 20720 0 142 LSC 0.276312 117 138 7 24 no 0.894737 18 0.944444 0.268985 0.957746 70.500000 trnS-GGA tRNA trnS-GGA trnS-GGA 20721 20810 1 90 LSC 0.029003 17 90 0 1 no 0.526316 14 0.714286 0.030354 1.000000 56.700000 IGS_030 igs trnS-GGA|rps4 trnS-GGA-rps4 20811 21013 0 203 LSC 0.240442 136 198 23 0 no 0.894737 18 0.944444 0.300213 0.891626 69.200000 rps4 gene rps4 rps4 21014 21607 -1 594 LSC 0.089560 212 0 0 12 no 0.894737 18 0.944444 0.089560 1.000000 76.700000 IGS_031 igs rps4|trnT-UGU rps4-trnT-UGU 21608 21849 0 242 LSC 0.241718 177 203 5 4 no 0.894737 18 0.944444 0.249588 0.871901 69.200000 trnT-UGU tRNA trnT-UGU trnT-UGU 21850 21922 -1 73 LSC 0.029240 9 1 2 0 no 0.368421 11 0.636364 0.029290 1.000000 53.000000 IGS_032 igs trnT-UGU|trnL-UAA trnT-UGU-trnL-UAA 21923 22251 0 329 LSC 0.314981 260 303 3 4 no 0.894737 18 0.944444 0.327614 0.817629 69.100000 trnL-UAA_part1 tRNA trnL-UAA trnL-UAA 22252 22286 1 35 LSC 0.045113 6 0 0 4 no 0.105263 8 0.250000 0.045113 1.000000 53.500000 trnL-UAA_part2 tRNA trnL-UAA trnL-UAA 22544 22593 1 50 LSC 0.045029 7 1 3 2 no 0.526316 14 0.714286 0.045184 1.000000 64.000000 IGS_035 igs trnL-UAA|trnF-GAA trnL-UAA-trnF-GAA 22594 22706 0 113 LSC 0.308043 90 105 26 15 no 0.894737 18 0.944444 0.316637 0.911504 70.500000 trnF-GAA tRNA trnF-GAA trnF-GAA 22707 22779 1 73 LSC 0.015060 3 0 0 3 no 0.052632 6 0.166667 0.015060 1.000000 31.700000 IGS_036 igs trnF-GAA|trnM-CAU trnF-GAA-trnM-CAU 22780 23059 0 280 LSC 0.278692 228 246 13 15 no 0.894737 18 0.944444 0.271420 0.985714 72.000000 trnM-CAU tRNA trnM-CAU trnM-CAU 23060 23132 1 73 LSC 0.010895 5 0 0 0 no 0.210526 6 0.666667 0.010895 1.000000 36.200000 IGS_037 igs trnM-CAU|atpE trnM-CAU-atpE 23133 23284 0 152 LSC 0.216631 108 130 35 1 no 0.894737 18 0.944444 0.206474 0.973684 72.100000 atpE gene atpE atpE 23285 23542 -1 258 LSC 0.100249 110 6 0 0 no 0.894737 18 0.944444 0.100470 0.996124 73.300000 atpB gene atpB atpB 23539 25023 -1 1485 LSC 0.079451 470 22 1 0 no 0.894737 18 0.944444 0.079320 1.000000 78.600000 IGS_039 igs atpB|rbcL atpB-rbcL 25024 25463 0 440 LSC 0.244451 329 360 4 2 no 0.894737 18 0.944444 0.237580 0.911364 72.800000 rbcL gene rbcL rbcL 25464 26930 1 1467 LSC 0.065955 416 1464 5 0 yes 0.894737 18 0.944444 0.071169 1.000000 80.300000 IGS_040 igs rbcL|accD rbcL-accD 26931 28015 0 1085 LSC 0.231938 708 990 2 2 yes 1.000000 19 1.000000 0.238907 0.884793 77.500000 accD gene accD accD 28016 29494 1 1479 LSC 0.136390 753 340 0 0 yes 1.000000 19 1.000000 0.132182 0.994591 83.800000 IGS_041 igs accD|ycf4 accD-ycf4 29495 29837 0 343 LSC 0.274257 267 288 0 5 no 0.894737 18 0.944444 0.258470 0.816327 69.100000 ycf4 gene ycf4 ycf4 29838 30368 1 531 LSC 0.121674 253 261 1 4 no 0.894737 18 0.944444 0.127208 1.000000 80.300000 IGS_042 igs ycf4|cemA ycf4-cemA 30369 30657 0 289 LSC 0.267754 218 289 0 4 no 0.789474 17 0.882353 0.263179 0.913495 67.500000 cemA gene cemA cemA 30658 31356 1 699 LSC 0.120121 331 699 4 1 no 0.789474 17 0.882353 0.120942 0.998569 77.400000 IGS_043 igs cemA|petA cemA-petA 31357 31526 0 170 LSC 0.166742 105 170 3 5 no 0.789474 17 0.882353 0.170895 0.982353 69.000000 petA gene petA petA 31527 32489 1 963 LSC 0.096078 339 963 0 0 no 0.789474 17 0.882353 0.096091 0.998962 77.700000 IGS_044 igs petA|psbJ petA-psbJ 32490 32933 0 444 LSC 0.273273 329 444 3 6 no 0.789474 17 0.882353 0.274736 0.891892 70.400000 psbJ gene psbJ psbJ 32934 33104 -1 171 LSC 0.096830 54 171 1 10 no 0.789474 17 0.882353 0.095630 0.994152 71.200000 IGS_045 igs psbJ|psbL psbJ-psbL 33105 33177 0 73 LSC 0.148958 39 73 6 9 no 0.789474 17 0.882353 0.142050 0.931507 69.100000 psbL gene psbL psbL 33178 33294 -1 117 LSC 0.049580 28 117 0 1 no 0.736842 16 0.875000 0.049639 1.000000 70.100000 IGS_046 igs psbL|psbF psbL-psbF 33295 33331 0 37 LSC 0.080831 14 37 20 27 no 0.473684 13 0.692308 0.083716 1.000000 66.100000 psbF gene psbF psbF 33332 33451 -1 120 LSC 0.038078 27 120 6 12 no 0.789474 17 0.882353 0.037829 1.000000 66.600000 psbE gene psbE psbE 33448 33702 -1 255 LSC 0.075634 73 255 25 0 no 0.789474 17 0.882353 0.075634 1.000000 71.500000 IGS_048 igs psbE|petL psbE-petL 33703 33980 0 278 LSC 0.175501 170 278 11 4 no 0.789474 17 0.882353 0.176832 0.920863 67.900000 petL gene petL petL 33981 34076 1 96 LSC 0.101026 40 96 2 1 no 0.789474 17 0.882353 0.101026 1.000000 71.600000 IGS_049 igs petL|petG petL-petG 34077 34234 0 158 LSC 0.231115 115 158 6 3 no 0.789474 17 0.882353 0.222598 0.987342 68.800000 petG gene petG petG 34235 34348 1 114 LSC 0.093051 45 48 3 1 no 0.894737 18 0.944444 0.096386 1.000000 75.500000 IGS_050 igs petG|trnW-CCA petG-trnW-CCA 34349 34410 0 62 LSC 0.241853 47 56 6 22 no 0.894737 18 0.944444 0.255294 1.000000 72.100000 trnW-CCA tRNA trnW-CCA trnW-CCA 34411 34484 -1 74 LSC 0.027659 9 0 0 3 no 0.263158 10 0.500000 0.027659 1.000000 48.600000 IGS_051 igs trnW-CCA|trnP-UGG trnW-CCA-trnP-UGG 34485 34638 0 154 LSC 0.265176 114 148 0 22 no 0.894737 18 0.944444 0.259341 0.850649 68.700000 trnP-UGG tRNA trnP-UGG trnP-UGG 34639 34712 -1 74 LSC 0.015647 7 0 3 1 no 0.315789 8 0.750000 0.015647 1.000000 43.600000 IGS_052 igs trnP-UGG|psaJ trnP-UGG-psaJ 34713 34835 0 123 LSC 0.229307 80 81 26 4 no 0.894737 18 0.944444 0.234840 0.991870 74.300000 psaJ gene psaJ psaJ 34836 34970 1 135 LSC 0.115341 64 10 0 1 no 0.894737 18 0.944444 0.117077 1.000000 76.400000 IGS_053 igs psaJ|rpl33 psaJ-rpl33 34971 35088 0 118 LSC 0.186564 75 105 3 0 no 0.894737 18 0.944444 0.199491 0.932203 69.800000 rpl33 gene rpl33 rpl33 35089 35289 1 201 LSC 0.111334 81 14 0 0 no 0.894737 18 0.944444 0.109817 1.000000 76.600000 IGS_054 igs rpl33|rps18 rpl33-rps18 35290 35410 0 121 LSC 0.203626 90 120 9 6 no 0.894737 18 0.944444 0.221233 0.991736 72.700000 rps18 gene rps18 rps18 35411 35839 1 429 LSC 0.114946 184 122 1 2 no 0.894737 18 0.944444 0.111299 0.990676 77.900000 IGS_055 igs rps18|rpl20 rps18-rpl20 35840 35935 0 96 LSC 0.195539 61 41 0 1 no 0.894737 18 0.944444 0.193485 0.989583 74.900000 rpl20 gene rpl20 rpl20 35936 36298 -1 363 LSC 0.114863 164 25 0 2 no 0.894737 18 0.944444 0.114243 1.000000 77.900000 IGS_056 igs rpl20|rps12 rpl20-rps12 36299 37044 0 746 LSC 0.142523 370 307 15 15 yes 0.894737 18 0.944444 0.136692 0.943700 80.400000 rps12_part1 gene rps12 rps12 37045 37158 -1 114 LSC 0.061660 27 0 14 0 no 0.789474 17 0.882353 0.061660 1.000000 68.600000 IGS_057 igs rps12|clpP rps12-clpP 37159 37225 0 67 LSC 0.184452 40 17 8 1 no 0.894737 18 0.944444 0.189992 0.910448 72.900000 clpP gene clpP clpP 37226 39039 -1 1814 LSC 0.125674 806 786 0 1 no 0.894737 18 0.944444 0.113257 0.987321 79.900000 IGS_058 igs clpP|psbB clpP-psbB 39040 39284 0 245 LSC 0.206251 163 174 5 11 no 0.894737 18 0.944444 0.201492 0.975510 73.000000 psbB gene psbB psbB 39285 40811 1 1527 LSC 0.078395 491 1097 1 0 yes 0.894737 18 0.944444 0.088239 1.000000 81.500000 IGS_059 igs psbB|psbT psbB-psbT 40812 40918 0 107 LSC 0.198807 65 102 1 35 no 0.894737 18 0.944444 0.202569 1.000000 73.400000 psbT gene psbT psbT 40919 41026 1 108 LSC 0.092381 36 108 6 0 no 0.894737 18 0.944444 0.091195 1.000000 74.100000 IGS_060 igs psbT|psbN psbT-psbN 41027 41080 0 54 LSC 0.214576 39 54 6 11 no 0.894737 18 0.944444 0.213991 0.981481 75.000000 psbN gene psbN psbN 41081 41221 -1 141 LSC 0.086914 59 141 1 0 no 0.894737 18 0.944444 0.086914 1.000000 75.100000 IGS_061 igs psbN|psbH psbN-psbH 41222 41343 0 122 LSC 0.225084 92 122 6 5 no 0.894737 18 0.944444 0.234629 0.983607 71.900000 psbH gene psbH psbH 41344 41553 1 210 LSC 0.079762 68 210 4 2 no 0.789474 17 0.882353 0.079762 1.000000 71.700000 IGS_062 igs psbH|petB psbH-petB 41554 41671 0 118 LSC 0.179148 69 118 6 17 no 0.789474 17 0.882353 0.185560 0.983051 69.100000 petB gene petB petB 41672 43006 1 1335 LSC 0.106830 505 1335 0 0 no 0.789474 17 0.882353 0.097222 0.972285 76.200000 IGS_063 igs petB|petD petB-petD 43007 43162 0 156 LSC 0.193348 103 156 0 15 no 0.789474 17 0.882353 0.192033 0.935897 67.800000 petD gene petD petD 43163 44335 1 1173 LSC 0.128252 496 1165 5 3 no 0.894737 18 0.944444 0.119345 0.981245 78.700000 IGS_064 igs petD|rps11 petD-rps11 44336 45350 0 1015 LSC 0.311825 762 1005 8 0 yes 0.894737 18 0.944444 0.321429 0.651232 72.400000 rps11 gene rps11 rps11 45351 45767 -1 417 LSC 0.105950 161 28 0 0 no 0.894737 18 0.944444 0.105324 1.000000 79.100000 IGS_065 igs rps11|rpl36 rps11-rpl36 45768 45867 0 100 LSC 0.242248 74 94 4 1 no 0.894737 18 0.944444 0.244231 0.940000 69.900000 rpl36 gene rpl36 rpl36 45868 45981 -1 114 LSC 0.077236 40 114 0 0 no 0.842105 17 0.941176 0.098482 1.000000 73.100000 IGS_066 igs rpl36|rps8 rpl36-rps8 45982 46198 0 217 LSC 0.282369 159 204 10 0 no 0.894737 18 0.944444 0.307651 0.820276 68.300000 rps8 gene rps8 rps8 46199 46603 -1 405 LSC 0.107787 160 9 0 0 no 0.894737 18 0.944444 0.107743 1.000000 75.500000 IGS_067 igs rps8|rpl14 rps8-rpl14 46604 46774 0 171 LSC 0.235849 127 135 3 3 no 0.894737 18 0.944444 0.234942 0.982456 73.600000 rpl14 gene rpl14 rpl14 46775 47143 -1 369 LSC 0.072299 111 0 1 0 no 0.894737 18 0.944444 0.072299 1.000000 72.000000 IGS_068 igs rpl14|rpl16 rpl14-rpl16 47144 47247 0 104 LSC 0.213659 77 68 17 0 no 0.894737 18 0.944444 0.226312 1.000000 74.300000 rpl16 gene rpl16 rpl16 47248 48475 -1 1228 LSC 0.162297 647 358 2 8 yes 0.894737 18 0.944444 0.149012 0.977199 81.100000 IGS_069 igs rpl16|rps3 rpl16-rps3 48476 48559 0 84 LSC 0.212154 57 52 15 0 no 0.894737 18 0.944444 0.193616 0.904762 70.700000 rps3 gene rps3 rps3 48560 49219 -1 660 LSC 0.104884 273 15 1 2 no 0.894737 18 0.944444 0.104760 1.000000 79.700000 rpl22 gene rpl22 rpl22 49204 49647 -1 444 LSC 0.146003 240 15 4 0 no 0.894737 18 0.944444 0.146017 0.997748 77.700000 IGS_071 igs rpl22|rps19 rpl22-rps19 49648 49714 0 67 LSC 0.247957 49 40 0 1 no 0.894737 18 0.944444 0.241418 0.940299 73.400000 rps19 gene rps19 rps19 49715 49993 -1 279 LSC 0.094678 105 0 2 0 no 0.894737 18 0.944444 0.094678 1.000000 70.500000 IGS_072 igs rps19|rpl2 rps19-rpl2 49994 50076 0 83 LSC 0.312376 69 60 4 3 no 0.894737 18 0.944444 0.300600 0.903614 72.200000 rpl2 gene rpl2 rpl2 50077 50889 -1 813 LSC 0.112806 342 71 0 2 yes 0.894737 18 0.944444 0.112209 1.000000 82.900000 IGS_073 igs rpl2|trnI-CAU rpl2-trnI-CAU 50890 51055 0 166 IRb 0.254656 117 166 2 51 no 0.894737 18 0.944444 0.270225 0.813253 68.300000 trnI-CAU tRNA trnI-CAU trnI-CAU 51056 51129 -1 74 IRb 0.017455 7 74 0 4 no 0.263158 8 0.625000 0.017472 1.000000 44.700000 IGS_074 igs trnI-CAU|ycf2 trnI-CAU-ycf2 51130 51431 0 302 IRb 0.176028 175 299 15 24 no 0.894737 18 0.944444 0.190886 0.877483 70.200000 ycf2 gene ycf2 ycf2 51432 56846 1 5415 IRb 0.059273 1562 1476 1 0 no 0.894737 18 0.944444 0.059012 0.999815 75.800000 IGS_075 igs ycf2|trnL-CAA ycf2-trnL-CAA 56847 56932 0 86 IRb 0.114312 35 64 18 73 no 0.842105 17 0.941176 0.108898 0.988372 74.500000 trnL-CAA tRNA trnL-CAA trnL-CAA 56933 57012 -1 80 IRb 0.003801 2 1 4 2 no 0.105263 4 0.500000 0.003804 1.000000 27.300000 IGS_076 igs trnL-CAA|rps7 trnL-CAA-rps7 57013 57526 0 514 IRb 0.148472 272 509 6 12 no 0.894737 18 0.944444 0.164628 0.840467 73.400000 rps7 gene rps7 rps7 57527 57994 -1 468 IRb 0.032726 78 12 1 1 no 0.842105 17 0.941176 0.032815 1.000000 68.500000 IGS_077 igs rps7|rps12 rps7-rps12 57995 58039 0 45 IRb 0.089019 18 2 29 15 no 0.736842 16 0.875000 0.091231 0.977778 73.400000 rps12_part2 gene rps12 rps12 58040 58297 -1 258 IRb 0.019833 29 0 0 22 no 0.789474 17 0.882353 0.019833 1.000000 55.000000 IGS_078 igs rps12|trnV-GAC rps12-trnV-GAC 58298 58886 0 589 IRb 0.104738 247 365 2 73 no 0.894737 18 0.944444 0.088303 0.967742 78.200000 trnV-GAC tRNA trnV-GAC trnV-GAC 58887 58958 1 72 IRb 0.010315 7 2 0 1 no 0.368421 8 0.875000 0.010168 1.000000 45.900000 IGS_079 igs trnV-GAC|rrn16 trnV-GAC-rrn16 58959 59074 0 116 IRb 0.046779 27 33 72 64 no 0.894737 18 0.944444 0.046688 1.000000 79.200000 rrn16 rRNA rrn16 rrn16 59075 60566 1 1492 IRb 0.006534 57 8 33 38 no 0.894737 18 0.944444 0.006523 1.000000 52.600000 IGS_080 igs rrn16|rrn23 rrn16-rrn23 60567 60887 0 321 IRb 0.071202 105 211 269 9 no 0.894737 18 0.944444 0.065639 0.947040 72.700000 rrn23 rRNA rrn23 rrn23 60888 63712 1 2825 IRb 0.011698 179 50 3 1 no 0.894737 18 0.944444 0.011456 1.000000 54.400000 IGS_081 igs rrn23|rrn4.5 rrn23-rrn4.5 63713 63794 0 82 IRb 0.067056 25 78 16 31 no 0.736842 16 0.875000 0.075256 1.000000 72.200000 rrn4.5 rRNA rrn4.5 rrn4.5 63795 63897 1 103 IRb 0.017033 11 0 1 27 no 0.368421 9 0.777778 0.017033 1.000000 45.900000 IGS_082 igs rrn4.5|rrn5 rrn4.5-rrn5 63898 63980 0 83 IRb 0.058255 23 67 54 13 no 0.894737 18 0.944444 0.058134 0.975904 72.500000 rrn5 rRNA rrn5 rrn5 63981 64101 1 121 IRb 0.028678 23 5 8 3 no 0.421053 11 0.727273 0.028894 1.000000 57.300000 IGS_083 igs rrn5|trnN-GUU rrn5-trnN-GUU 64102 64168 0 67 IRb 0.083221 28 54 0 8 no 0.736842 16 0.875000 0.083070 1.000000 70.200000 trnN-GUU tRNA trnN-GUU trnN-GUU 64169 64240 -1 72 IRb 0.019250 7 0 9 1 no 0.315789 8 0.750000 0.019250 1.000000 45.600000 IGS_084 igs trnN-GUU|trnL-UAG trnN-GUU-trnL-UAG 64241 65875 0 1635 IRb 0.117289 609 1635 14 48 no 0.736842 16 0.875000 0.109892 0.643425 70.100000 trnL-UAG tRNA trnL-UAG trnL-UAG 65876 65955 1 80 SSC 0.006250 1 80 2 3 no 0.052632 3 0.333333 0.006250 0.000000 11.800000 IGS_085 igs trnL-UAG|ccsA trnL-UAG-ccsA 65956 66073 0 118 SSC 0.098870 22 118 31 5 no 0.105263 4 0.500000 0.144948 0.000000 43.600000 ccsA gene ccsA ccsA 66074 66964 1 891 SSC 0.067153 114 891 3 16 no 0.263158 7 0.714286 0.213116 0.000000 52.700000 IGS_086 igs ccsA|psaC ccsA-psaC 66965 67132 0 168 SSC 0.135771 43 168 1 0 no 0.263158 7 0.714286 0.282496 0.000000 46.200000 psaC gene psaC psaC 67133 67378 -1 246 SSC 0.052846 24 246 2 5 no 0.105263 4 0.500000 0.052846 0.000000 43.100000 IGS_087 igs psaC|rps15 psaC-rps15 67379 67820 0 442 SSC 0.140282 115 442 18 4 no 0.263158 7 0.714286 0.273274 0.000000 49.400000 rps15 gene rps15 rps15 67821 68081 -1 261 SSC 0.056194 27 261 8 14 no 0.105263 4 0.500000 0.056194 0.000000 43.800000 IGS_088 igs rps15|ycf1 rps15-ycf1 68082 68308 0 227 SSC 0.149046 63 227 4 30 no 0.105263 4 0.500000 0.157831 0.000000 43.500000 ycf1 gene ycf1 ycf1 68309 73330 -1 5022 SSC 0.083147 795 5022 2 1 no 0.210526 6 0.666667 0.224495 0.000000 45.300000 IGS_089 igs ycf1|trnN-GUU ycf1-trnN-GUU 73331 73443 0 113 IRa 0.025369 6 113 74 55 no 0.157895 5 0.600000 0.021505 0.000000 31.400000 trnN-GUU tRNA trnN-GUU trnN-GUU 73444 73515 1 72 IRa 0.013889 2 72 8 22 no 0.052632 3 0.333333 0.013889 0.000000 17.600000 IGS_090 igs trnN-GUU|rrn5 trnN-GUU-rrn5 73516 73582 0 67 IRa 0.009950 1 67 8 34 no 0.105263 4 0.500000 0.010103 0.000000 15.200000 rrn5 rRNA rrn5 rrn5 73583 73703 -1 121 IRa 0.005510 1 121 44 28 no 0.000000 3 0.000000 0.005510 0.000000 11.900000 IGS_091 igs rrn5|rrn4.5 rrn5-rrn4.5 73704 73786 0 83 IRa 0.018072 3 83 86 79 no 0.105263 4 0.500000 0.018419 0.000000 26.800000 rrn4.5 rRNA rrn4.5 rrn4.5 73787 73889 -1 103 IRa 0.025243 7 103 32 51 no 0.105263 4 0.500000 0.000000 0.000000 30.500000 IGS_092 igs rrn4.5|rrn23 rrn4.5-rrn23 73890 73971 0 82 IRa 0.018293 3 82 13 16 no 0.052632 3 0.333333 0.018293 0.000000 21.000000 rrn23 rRNA rrn23 rrn23 73972 76796 -1 2825 IRa 0.004012 22 2825 22 3 no 0.105263 4 0.500000 0.004025 0.000000 14.700000 IGS_093 igs rrn23|rrn16 rrn23-rrn16 76797 77117 0 321 IRa 0.016096 10 321 48 128 no 0.105263 4 0.500000 0.016544 0.000000 23.400000 rrn16 rRNA rrn16 rrn16 77118 78609 -1 1492 IRa 0.004021 12 1492 82 38 no 0.210526 6 0.666667 0.002793 0.000000 22.100000 IGS_094 igs rrn16|trnV-GAC rrn16-trnV-GAC 78610 78725 0 116 IRa 0.031609 7 116 198 76 no 0.105263 4 0.500000 0.034026 0.000000 35.700000 trnV-GAC tRNA trnV-GAC trnV-GAC 78726 78797 -1 72 IRa 0.000000 0 72 2 4 no 0.000000 2 0.000000 0.000000 0.000000 6.400000 IGS_095 igs trnV-GAC|rps7 trnV-GAC-rps7 78798 79689 0 892 IRa 0.033333 58 892 74 36 no 0.210526 6 0.666667 0.219101 0.000000 42.300000 rps7 gene rps7 rps7 79690 80157 1 468 IRa 0.048860 49 468 2 1 no 0.157895 5 0.600000 0.231710 0.000000 47.300000 IGS_096 igs rps7|trnL-CAA rps7-trnL-CAA 80158 80671 0 514 IRa 0.075097 74 514 19 25 no 0.210526 6 0.666667 0.250583 0.000000 51.100000 trnL-CAA tRNA trnL-CAA trnL-CAA 80672 80751 1 80 IRa 0.024167 4 80 3 30 no 0.105263 4 0.500000 0.000000 0.000000 25.600000 IGS_097 igs trnL-CAA|ycf2 trnL-CAA-ycf2 80752 80837 0 86 IRa 0.052326 9 86 48 18 no 0.052632 3 0.333333 0.060811 0.000000 43.600000 ycf2 gene ycf2 ycf2 80838 86252 -1 5415 IRa 0.031677 349 5415 22 4 no 0.210526 6 0.666667 0.214086 0.000000 32.800000 IGS_098 igs ycf2|trnI-CAU ycf2-trnI-CAU 86253 86554 0 302 IRa 0.035320 21 302 57 89 no 0.105263 4 0.500000 0.039854 0.000000 37.100000 trnI-CAU tRNA trnI-CAU trnI-CAU 86555 86628 1 74 IRa 0.000000 0 74 12 15 no 0.052632 3 0.333333 0.000000 0.000000 8.100000 IGS_099 igs trnI-CAU|trnH-GUG trnI-CAU-trnH-GUG 86629 86727 0 99 IRa 0.041077 28899 57861 86 47 no 1.000000 19 1.000000 0.107307 0.726960 68.600000