feature_id feature_type parent_gene label_name start end strand length_bp region pi variable_sites indel_sites conserved_left_bp conserved_right_bp primer_available species_resolution unique_haplotype_count species_specific_haplotype_ratio interspecific_divergence alignment_reliability markerseek_score rps12_part2 gene rps12 rps12 1860 2663 1 804 IRb NA 0 804 300 300 no 1.000000 2 1.000000 NA 0.000000 46.200000 IGS_001 igs rps12|rps7 rps12-rps7 2664 2717 0 54 IRb NA 0 54 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 rps7 gene rps7 rps7 2718 3185 1 468 IRb NA 0 468 300 300 no 1.000000 2 1.000000 NA 0.000000 43.500000 IGS_002 igs rps7|ndhB rps7-ndhB 3186 3512 0 327 IRb NA 0 327 300 300 no 1.000000 2 1.000000 NA 0.000000 40.600000 ndhB gene ndhB ndhB 3513 5725 1 2213 IRb NA 0 2213 300 300 no 1.000000 2 1.000000 NA 0.000000 44.800000 IGS_003 igs ndhB|trnL-CAA ndhB-trnL-CAA 5726 6704 0 979 IRb NA 0 979 300 300 no 1.000000 2 1.000000 NA 0.000000 46.200000 trnL-CAA tRNA trnL-CAA trnL-CAA 6705 6785 1 81 IRb NA 0 81 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 IGS_004 igs trnL-CAA|ycf2 trnL-CAA-ycf2 6786 7708 0 923 IRb NA 0 923 300 300 no 1.000000 2 1.000000 NA 0.000000 46.200000 ycf2 gene ycf2 ycf2 7709 14530 -1 6822 IRb NA 0 6822 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 IGS_005 igs ycf2|trnI-CAU ycf2-trnI-CAU 14531 14598 0 68 IRb NA 0 68 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 trnI-CAU tRNA trnI-CAU trnI-CAU 14599 14672 1 74 IRb NA 0 74 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 IGS_006 igs trnI-CAU|rpl23 trnI-CAU-rpl23 14673 14838 0 166 IRb NA 0 166 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 rpl23 gene rpl23 rpl23 14839 15132 1 294 IRb NA 0 294 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 IGS_007 igs rpl23|rpl2 rpl23-rpl2 15133 15150 0 18 IRb NA 0 18 300 300 no 1.000000 2 1.000000 NA 0.000000 40.000000 rpl2 gene rpl2 rpl2 15151 16636 1 1486 IRb NA 0 1486 300 61 no 1.000000 2 1.000000 NA 0.000000 35.800000 IGS_008 igs rpl2|trnH-GUG rpl2-trnH-GUG 16637 16677 0 41 IRb NA 0 41 300 20 no 1.000000 2 1.000000 NA 0.000000 26.500000 trnH-GUG tRNA trnH-GUG trnH-GUG 16678 16745 -1 68 LSC 0.015385 1 3 300 10 no 1.000000 2 1.000000 NA 0.955882 51.300000 IGS_009 igs trnH-GUG|psbA trnH-GUG-psbA 16746 17459 0 714 LSC 0.075728 39 199 47 20 yes 1.000000 2 1.000000 NA 0.721289 73.000000 psbA gene psbA psbA 17460 18521 -1 1062 LSC 0.006591 7 0 35 11 no 1.000000 2 1.000000 NA 1.000000 48.400000 IGS_010 igs psbA|trnK-UUU psbA-trnK-UUU 18522 18911 0 390 LSC 0.088571 31 40 118 143 yes 1.000000 2 1.000000 NA 0.897436 84.000000 trnK-UUU_part2 tRNA trnK-UUU trnK-UUU 18912 18950 -1 39 LSC 0.000000 0 0 86 104 no 0.000000 1 0.000000 NA 1.000000 25.200000 matK gene matK matK 19200 20735 -1 1536 LSC 0.010417 16 0 55 26 no 1.000000 2 1.000000 NA 1.000000 51.600000 IGS_013 igs matK|trnK-UUU matK-trnK-UUU 20736 21485 0 750 LSC 0.018792 14 5 99 107 no 1.000000 2 1.000000 NA 0.993333 62.600000 trnK-UUU_part1 tRNA trnK-UUU trnK-UUU 21486 21521 -1 36 LSC 0.000000 0 0 34 71 no 0.000000 1 0.000000 NA 1.000000 21.300000 IGS_014 igs trnK-UUU|rps16 trnK-UUU-rps16 21522 22101 0 580 LSC 0.013817 8 1 70 43 no 1.000000 2 1.000000 NA 0.998276 54.700000 rps16 gene rps16 rps16 22102 24669 -1 2568 LSC 0.035436 50 1157 4 21 yes 1.000000 2 1.000000 NA 0.549455 54.600000 IGS_015 igs rps16|trnQ-UUG rps16-trnQ-UUG 24670 25148 0 479 LSC 0.008547 4 11 119 75 no 1.000000 2 1.000000 NA 0.977035 54.000000 trnQ-UUG tRNA trnQ-UUG trnQ-UUG 25149 25220 -1 72 LSC 0.000000 0 0 16 3 no 0.000000 1 0.000000 NA 1.000000 19.000000 IGS_016 igs trnQ-UUG|psbK trnQ-UUG-psbK 25221 25595 0 375 LSC 0.005333 2 0 88 149 no 1.000000 2 1.000000 NA 1.000000 48.700000 psbK gene psbK psbK 25596 25784 1 189 LSC 0.005291 1 0 119 101 no 1.000000 2 1.000000 NA 1.000000 48.100000 IGS_017 igs psbK|psbI psbK-psbI 25785 26350 0 566 LSC 0.010909 6 16 39 36 no 1.000000 2 1.000000 NA 0.971731 54.700000 psbI gene psbI psbI 26351 26461 1 111 LSC 0.009009 1 0 4 21 no 1.000000 2 1.000000 NA 1.000000 43.000000 IGS_018 igs psbI|trnS-GCU psbI-trnS-GCU 26462 26599 0 138 LSC 0.007246 1 0 74 109 no 1.000000 2 1.000000 NA 1.000000 47.200000 trnS-GCU tRNA trnS-GCU trnS-GCU 26600 26687 -1 88 LSC 0.000000 0 0 116 21 no 0.000000 1 0.000000 NA 1.000000 20.300000 IGS_019 igs trnS-GCU|trnG-UCC trnS-GCU-trnG-UCC 26688 29585 0 2898 LSC 0.036522 42 1748 204 36 yes 1.000000 2 1.000000 NA 0.396825 54.200000 trnG-UCC_part1 tRNA trnG-UCC trnG-UCC 29586 29608 1 23 LSC 0.000000 0 0 130 13 no 0.000000 1 0.000000 NA 1.000000 19.700000 trnG-UCC_part2 tRNA trnG-UCC trnG-UCC 30344 30391 1 48 LSC 0.000000 0 0 23 1 no 0.000000 1 0.000000 NA 1.000000 18.800000 IGS_022 igs trnG-UCC|trnR-UCU trnG-UCC-trnR-UCU 30392 30542 0 151 LSC 0.082192 12 5 71 188 yes 1.000000 2 1.000000 NA 0.966887 78.500000 trnR-UCU tRNA trnR-UCU trnR-UCU 30543 30614 1 72 LSC 0.000000 0 0 9 116 no 0.000000 1 0.000000 NA 1.000000 19.400000 IGS_023 igs trnR-UCU|atpA trnR-UCU-atpA 30615 30744 0 130 LSC 0.007692 1 0 81 60 no 1.000000 2 1.000000 NA 1.000000 46.400000 atpA gene atpA atpA 30745 32268 -1 1524 LSC 0.006562 10 0 13 23 no 1.000000 2 1.000000 NA 1.000000 48.400000 IGS_024 igs atpA|atpF atpA-atpF 32269 32344 0 76 LSC 0.026667 2 1 300 104 no 1.000000 2 1.000000 NA 0.986842 61.900000 atpF gene atpF atpF 32345 34130 -1 1786 LSC 0.026172 43 143 6 115 no 1.000000 2 1.000000 NA 0.919933 62.400000 IGS_025 igs atpF|atpH atpF-atpH 34131 34672 0 542 LSC 0.048077 25 22 12 120 yes 1.000000 2 1.000000 NA 0.959410 74.800000 atpH gene atpH atpH 34673 34918 -1 246 LSC 0.004065 1 0 37 36 no 1.000000 2 1.000000 NA 1.000000 42.500000 IGS_026 igs atpH|atpI atpH-atpI 34919 36440 0 1522 LSC 0.053151 70 205 125 72 yes 1.000000 2 1.000000 NA 0.865309 79.800000 atpI gene atpI atpI 36441 37184 -1 744 LSC 0.004032 3 0 27 64 no 1.000000 2 1.000000 NA 1.000000 48.100000 IGS_027 igs atpI|rps2 atpI-rps2 37185 37431 0 247 LSC 0.020243 5 0 300 90 no 1.000000 2 1.000000 NA 1.000000 55.900000 rps2 gene rps2 rps2 37432 38142 -1 711 LSC 0.002813 2 0 4 117 no 1.000000 2 1.000000 NA 1.000000 45.700000 IGS_028 igs rps2|rpoC2 rps2-rpoC2 38143 38364 0 222 LSC 0.004651 1 7 252 16 no 1.000000 2 1.000000 NA 0.968468 44.400000 rpoC2 gene rpoC2 rpoC2 38365 42507 -1 4143 LSC 0.006526 27 6 104 300 no 1.000000 2 1.000000 NA 0.998552 50.500000 IGS_029 igs rpoC2|rpoC1 rpoC2-rpoC1 42508 42671 0 164 LSC 0.000000 0 0 300 294 no 0.000000 1 0.000000 NA 1.000000 33.800000 rpoC1 gene rpoC1 rpoC1 42672 45509 -1 2838 LSC 0.005654 16 8 300 77 no 1.000000 2 1.000000 NA 0.997181 50.300000 IGS_030 igs rpoC1|rpoB rpoC1-rpoB 45510 45514 0 5 LSC 0.000000 0 0 145 72 no 0.000000 1 0.000000 NA 1.000000 24.100000 rpoB gene rpoB rpoB 45515 48733 -1 3219 LSC 0.007766 25 0 150 82 no 1.000000 2 1.000000 NA 1.000000 50.900000 IGS_031 igs rpoB|trnC-GCA rpoB-trnC-GCA 48734 50144 0 1411 LSC 0.029661 35 231 105 121 yes 1.000000 2 1.000000 NA 0.836286 69.700000 trnC-GCA tRNA trnC-GCA trnC-GCA 50145 50215 1 71 LSC 0.000000 0 0 242 50 no 0.000000 1 0.000000 NA 1.000000 22.500000 IGS_032 igs trnC-GCA|petN trnC-GCA-petN 50216 51260 0 1045 LSC 0.014749 15 28 300 152 no 1.000000 2 1.000000 NA 0.973206 66.200000 petN gene petN petN 51261 51350 1 90 LSC 0.000000 0 0 145 62 no 0.000000 1 0.000000 NA 1.000000 23.400000 IGS_033 igs petN|psbM petN-psbM 51351 52890 0 1540 LSC 0.043115 62 102 235 127 yes 1.000000 2 1.000000 NA 0.933766 82.000000 psbM gene psbM psbM 52891 52995 -1 105 LSC 0.000000 0 0 85 22 no 0.000000 1 0.000000 NA 1.000000 20.400000 IGS_034 igs psbM|trnD-GUC psbM-trnD-GUC 52996 53604 0 609 LSC 0.022989 14 0 190 31 no 1.000000 2 1.000000 NA 1.000000 59.300000 trnD-GUC tRNA trnD-GUC trnD-GUC 53605 53678 -1 74 LSC 0.013514 1 0 38 57 no 1.000000 2 1.000000 NA 1.000000 48.100000 IGS_035 igs trnD-GUC|trnY-GUA trnD-GUC-trnY-GUA 53679 54008 0 330 LSC 0.018182 6 0 42 120 no 1.000000 2 1.000000 NA 1.000000 51.700000 trnY-GUA tRNA trnY-GUA trnY-GUA 54009 54092 -1 84 LSC 0.000000 0 0 45 36 no 0.000000 1 0.000000 NA 1.000000 21.400000 IGS_036 igs trnY-GUA|trnE-UUC trnY-GUA-trnE-UUC 54093 54204 0 112 LSC 0.030928 3 15 129 79 no 1.000000 2 1.000000 NA 0.866071 63.200000 trnE-UUC tRNA trnE-UUC trnE-UUC 54205 54277 -1 73 LSC 0.000000 0 0 13 6 no 0.000000 1 0.000000 NA 1.000000 19.200000 IGS_037 igs trnE-UUC|trnT-GGU trnE-UUC-trnT-GGU 54278 55270 0 993 LSC 0.029959 29 25 86 173 yes 1.000000 2 1.000000 NA 0.974824 69.800000 trnT-GGU tRNA trnT-GGU trnT-GGU 55271 55342 1 72 LSC 0.000000 0 0 238 101 no 0.000000 1 0.000000 NA 1.000000 26.300000 IGS_038 igs trnT-GGU|psbD trnT-GGU-psbD 55343 56465 0 1123 LSC 0.012613 14 13 300 300 no 1.000000 2 1.000000 NA 0.988424 67.100000 psbD gene psbD psbD 56466 57527 1 1062 LSC 0.000000 0 0 75 84 no 0.000000 1 0.000000 NA 1.000000 30.600000 psbC gene psbC psbC 57511 58896 1 1386 LSC 0.002165 3 0 300 58 no 1.000000 2 1.000000 NA 1.000000 49.300000 IGS_040 igs psbC|trnS-UGA psbC-trnS-UGA 58897 59033 0 137 LSC 0.094891 13 0 300 132 yes 1.000000 2 1.000000 NA 1.000000 81.800000 trnS-UGA tRNA trnS-UGA trnS-UGA 59034 59126 -1 93 LSC 0.000000 0 0 22 39 no 0.000000 1 0.000000 NA 1.000000 20.400000 IGS_041 igs trnS-UGA|psbZ trnS-UGA-psbZ 59127 59474 0 348 LSC 0.005831 2 5 115 92 no 1.000000 2 1.000000 NA 0.985632 50.100000 psbZ gene psbZ psbZ 59475 59663 1 189 LSC 0.005291 1 0 262 137 no 1.000000 2 1.000000 NA 1.000000 50.800000 IGS_042 igs psbZ|trnG-GCC psbZ-trnG-GCC 59664 60504 0 841 LSC 0.068279 48 138 96 1 yes 1.000000 2 1.000000 NA 0.835910 75.100000 trnG-GCC tRNA trnG-GCC trnG-GCC 60505 60575 1 71 LSC 0.028169 2 0 64 300 no 1.000000 2 1.000000 NA 1.000000 58.500000 IGS_043 igs trnG-GCC|trnfM-CAU trnG-GCC-trnfM-CAU 60576 60740 0 165 LSC 0.000000 0 2 22 300 no 1.000000 2 1.000000 NA 0.987879 40.300000 trnfM-CAU tRNA trnfM-CAU trnfM-CAU 60741 60814 -1 74 LSC 0.000000 0 0 187 252 no 0.000000 1 0.000000 NA 1.000000 32.800000 IGS_044 igs trnfM-CAU|rps14 trnfM-CAU-rps14 60815 60970 0 156 LSC 0.000000 0 0 261 96 no 0.000000 1 0.000000 NA 1.000000 25.900000 rps14 gene rps14 rps14 60971 61273 -1 303 LSC 0.009901 3 0 300 91 no 1.000000 2 1.000000 NA 1.000000 50.100000 IGS_045 igs rps14|psaB rps14-psaB 61274 61414 0 141 LSC 0.007092 1 0 95 48 no 1.000000 2 1.000000 NA 1.000000 45.200000 psaB gene psaB psaB 61415 63619 -1 2205 LSC 0.002721 6 0 49 300 no 1.000000 2 1.000000 NA 1.000000 47.500000 IGS_046 igs psaB|psaA psaB-psaA 63620 63644 0 25 LSC 0.000000 0 0 26 300 no 0.000000 1 0.000000 NA 1.000000 20.700000 psaA gene psaA psaA 63645 65897 -1 2253 LSC 0.003551 8 0 51 86 no 1.000000 2 1.000000 NA 1.000000 48.000000 IGS_047 igs psaA|pafI psaA-pafI 65898 66562 0 665 LSC 0.009036 6 1 30 300 no 1.000000 2 1.000000 NA 0.998496 51.300000 pafI gene pafI pafI 66563 68652 -1 2090 LSC 0.006790 14 28 106 38 no 1.000000 2 1.000000 NA 0.986603 50.600000 IGS_048 igs pafI|trnS-GGA pafI-trnS-GGA 68653 69523 0 871 LSC 0.015240 13 18 138 282 no 1.000000 2 1.000000 NA 0.979334 64.800000 trnS-GGA tRNA trnS-GGA trnS-GGA 69524 69610 1 87 LSC 0.000000 0 0 34 195 no 0.000000 1 0.000000 NA 1.000000 21.300000 IGS_049 igs trnS-GGA|rps4 trnS-GGA-rps4 69611 69943 0 333 LSC 0.009009 3 0 121 300 no 1.000000 2 1.000000 NA 1.000000 52.400000 rps4 gene rps4 rps4 69944 70549 -1 606 LSC 0.001650 1 0 40 67 no 1.000000 2 1.000000 NA 1.000000 47.700000 IGS_050 igs rps4|trnT-UGU rps4-trnT-UGU 70550 72469 0 1920 LSC 0.023691 19 1118 85 117 no 1.000000 2 1.000000 NA 0.417708 53.900000 trnT-UGU tRNA trnT-UGU trnT-UGU 72470 72542 -1 73 LSC 0.000000 0 0 41 44 no 0.000000 1 0.000000 NA 1.000000 21.800000 IGS_051 igs trnT-UGU|trnL-UAA trnT-UGU-trnL-UAA 72543 74150 0 1608 LSC 0.064116 62 641 114 300 yes 1.000000 2 1.000000 NA 0.601368 74.400000 trnL-UAA_part1 tRNA trnL-UAA trnL-UAA 74151 74185 1 35 LSC 0.000000 0 0 20 300 no 0.000000 1 0.000000 NA 1.000000 20.200000 trnL-UAA_part2 tRNA trnL-UAA trnL-UAA 76036 76085 1 50 LSC 0.000000 0 0 54 78 no 0.000000 1 0.000000 NA 1.000000 22.800000 IGS_054 igs trnL-UAA|trnF-GAA trnL-UAA-trnF-GAA 76086 76238 0 153 LSC 0.013072 2 0 104 107 no 1.000000 2 1.000000 NA 1.000000 52.800000 trnF-GAA tRNA trnF-GAA trnF-GAA 76239 76311 1 73 LSC 0.000000 0 0 68 34 no 0.000000 1 0.000000 NA 1.000000 21.300000 IGS_055 igs trnF-GAA|ndhJ trnF-GAA-ndhJ 76312 78069 0 1758 LSC 0.093935 127 406 141 156 yes 1.000000 2 1.000000 NA 0.769056 85.100000 ndhJ gene ndhJ ndhJ 78070 78546 -1 477 LSC 0.006342 3 4 7 92 no 1.000000 2 1.000000 NA 0.991614 46.200000 IGS_056 igs ndhJ|ndhK ndhJ-ndhK 78547 78655 0 109 LSC 0.009174 1 0 127 37 no 1.000000 2 1.000000 NA 1.000000 45.600000 ndhK gene ndhK ndhK 78656 79399 -1 744 LSC 0.005376 4 0 16 105 no 1.000000 2 1.000000 NA 1.000000 48.000000 ndhC gene ndhC ndhC 79390 79752 -1 363 LSC 0.016529 6 0 2 20 no 1.000000 2 1.000000 NA 1.000000 48.500000 IGS_058 igs ndhC|trnV-UAC ndhC-trnV-UAC 79753 81046 0 1294 LSC 0.016509 21 22 23 238 no 1.000000 2 1.000000 NA 0.982998 56.600000 trnV-UAC_part2 tRNA trnV-UAC trnV-UAC 81047 81081 -1 35 LSC 0.000000 0 0 28 203 no 0.000000 1 0.000000 NA 1.000000 20.900000 trnV-UAC_part1 tRNA trnV-UAC trnV-UAC 81691 81728 -1 38 LSC 0.000000 0 0 300 102 no 0.000000 1 0.000000 NA 1.000000 26.400000 IGS_061 igs trnV-UAC|trnM-CAU trnV-UAC-trnM-CAU 81729 81917 0 189 LSC 0.005291 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 55.500000 trnM-CAU tRNA trnM-CAU trnM-CAU 81918 81990 1 73 LSC 0.000000 0 0 86 289 no 0.000000 1 0.000000 NA 1.000000 25.200000 IGS_062 igs trnM-CAU|atpE trnM-CAU-atpE 81991 82100 0 110 LSC 0.000000 0 0 159 179 no 0.000000 1 0.000000 NA 1.000000 30.700000 atpE gene atpE atpE 82101 82505 -1 405 LSC 0.004938 2 0 269 53 no 1.000000 2 1.000000 NA 1.000000 46.500000 atpB gene atpB atpB 82502 83998 -1 1497 LSC 0.002672 4 0 51 242 no 1.000000 2 1.000000 NA 1.000000 49.100000 IGS_064 igs atpB|rbcL atpB-rbcL 83999 84776 0 778 LSC 0.005175 4 5 64 300 no 1.000000 2 1.000000 NA 0.993573 52.100000 rbcL gene rbcL rbcL 84777 86219 1 1443 LSC 0.002079 3 0 300 30 no 1.000000 2 1.000000 NA 1.000000 47.200000 IGS_065 igs rbcL|accD rbcL-accD 86220 87074 0 855 LSC 0.008589 7 40 249 70 no 1.000000 2 1.000000 NA 0.953216 58.400000 accD gene accD accD 87075 88550 1 1476 LSC 0.004065 6 0 12 7 no 1.000000 2 1.000000 NA 1.000000 46.600000 IGS_066 igs accD|psaI accD-psaI 88551 90114 0 1564 LSC 0.072797 95 257 300 40 yes 1.000000 2 1.000000 NA 0.834399 78.300000 psaI gene psaI psaI 90115 90225 1 111 LSC 0.009009 1 0 78 43 no 1.000000 2 1.000000 NA 1.000000 45.900000 IGS_067 igs psaI|pafII psaI-pafII 90226 90596 0 371 LSC 0.008086 3 0 70 48 no 1.000000 2 1.000000 NA 1.000000 47.200000 pafII gene pafII pafII 90597 91151 1 555 LSC 0.001802 1 0 155 69 no 1.000000 2 1.000000 NA 1.000000 49.000000 IGS_068 igs pafII|cemA pafII-cemA 91152 92101 0 950 LSC 0.007407 7 5 300 2 no 1.000000 2 1.000000 NA 0.994737 48.700000 cemA gene cemA cemA 92102 92578 1 477 LSC 0.012579 6 0 129 300 no 1.000000 2 1.000000 NA 1.000000 58.100000 IGS_069 igs cemA|petA cemA-petA 92579 92796 0 218 LSC 0.000000 0 0 44 300 no 0.000000 1 0.000000 NA 1.000000 22.100000 petA gene petA petA 92797 93759 1 963 LSC 0.005192 5 0 262 11 no 1.000000 2 1.000000 NA 1.000000 47.600000 IGS_070 igs petA|psbJ petA-psbJ 93760 95511 0 1752 LSC 0.094194 146 202 8 33 yes 1.000000 2 1.000000 NA 0.884703 79.700000 psbJ gene psbJ psbJ 95512 95634 -1 123 LSC 0.008130 1 0 124 263 no 1.000000 2 1.000000 NA 1.000000 51.500000 IGS_071 igs psbJ|psbL psbJ-psbL 95635 95759 0 125 LSC 0.000000 0 0 89 138 no 0.000000 1 0.000000 NA 1.000000 25.400000 psbL gene psbL psbL 95760 95876 -1 117 LSC 0.000000 0 0 214 21 no 0.000000 1 0.000000 NA 1.000000 20.300000 IGS_072 igs psbL|psbF psbL-psbF 95877 95898 0 22 LSC 0.045455 1 0 300 37 no 1.000000 2 1.000000 NA 1.000000 66.400000 psbF gene psbF psbF 95899 96018 -1 120 LSC 0.008333 1 0 0 300 no 1.000000 2 1.000000 NA 1.000000 42.300000 IGS_073 igs psbF|psbE psbF-psbE 96019 96028 0 10 LSC 0.000000 0 0 82 300 no 0.000000 1 0.000000 NA 1.000000 24.900000 psbE gene psbE psbE 96029 96280 -1 252 LSC 0.000000 0 0 92 86 no 0.000000 1 0.000000 NA 1.000000 25.200000 IGS_074 igs psbE|petL psbE-petL 96281 97426 0 1146 LSC 0.007018 8 6 300 58 no 1.000000 2 1.000000 NA 0.994764 52.600000 petL gene petL petL 97427 97522 1 96 LSC 0.010417 1 0 73 57 no 1.000000 2 1.000000 NA 1.000000 47.800000 IGS_075 igs petL|petG petL-petG 97523 97691 0 169 LSC 0.011834 2 0 37 300 no 1.000000 2 1.000000 NA 1.000000 47.100000 petG gene petG petG 97692 97805 1 114 LSC 0.000000 0 0 63 227 no 0.000000 1 0.000000 NA 1.000000 23.500000 IGS_076 igs petG|trnW-CCA petG-trnW-CCA 97806 97922 0 117 LSC 0.000000 0 0 177 110 no 0.000000 1 0.000000 NA 1.000000 27.000000 trnW-CCA tRNA trnW-CCA trnW-CCA 97923 97996 -1 74 LSC 0.000000 0 0 294 36 no 0.000000 1 0.000000 NA 1.000000 21.400000 IGS_077 igs trnW-CCA|trnP-UGG trnW-CCA-trnP-UGG 97997 98163 0 167 LSC 0.005988 1 0 300 107 no 1.000000 2 1.000000 NA 1.000000 49.000000 trnP-UGG tRNA trnP-UGG trnP-UGG 98164 98237 -1 74 LSC 0.000000 0 0 130 33 no 0.000000 1 0.000000 NA 1.000000 21.200000 IGS_078 igs trnP-UGG|psaJ trnP-UGG-psaJ 98238 98510 0 273 LSC 0.007326 2 0 204 53 no 1.000000 2 1.000000 NA 1.000000 45.700000 psaJ gene psaJ psaJ 98511 98639 1 129 LSC 0.007752 1 0 146 70 no 1.000000 2 1.000000 NA 1.000000 47.200000 IGS_079 igs psaJ|rpl33 psaJ-rpl33 98640 99061 0 422 LSC 0.014218 6 0 75 20 no 1.000000 2 1.000000 NA 1.000000 49.700000 rpl33 gene rpl33 rpl33 99062 99262 1 201 LSC 0.014925 3 0 86 12 no 1.000000 2 1.000000 NA 1.000000 47.000000 IGS_080 igs rpl33|rps18 rpl33-rps18 99263 99570 0 308 LSC 0.041152 10 65 151 299 yes 1.000000 2 1.000000 NA 0.788961 71.900000 rps18 gene rps18 rps18 99571 99876 1 306 LSC 0.003268 1 0 35 300 no 1.000000 2 1.000000 NA 1.000000 42.100000 IGS_081 igs rps18|rpl20 rps18-rpl20 99877 99992 0 116 LSC 0.000000 0 0 6 300 no 0.000000 1 0.000000 NA 1.000000 19.200000 rpl20 gene rpl20 rpl20 99993 100358 -1 366 LSC 0.000000 0 0 122 39 no 0.000000 1 0.000000 NA 1.000000 23.100000 IGS_082 igs rpl20|rps12 rpl20-rps12 100359 101182 0 824 LSC 0.004860 4 1 300 300 no 1.000000 2 1.000000 NA 0.998786 61.700000 rps12_part1 gene rps12 rps12 101183 101296 -1 114 LSC 0.000000 0 0 300 187 no 0.000000 1 0.000000 NA 1.000000 32.800000 IGS_083 igs rps12|clpP1 rps12-clpP1 101297 101469 0 173 LSC 0.000000 0 0 300 14 no 0.000000 1 0.000000 NA 1.000000 19.800000 clpP1 gene clpP1 clpP1 101470 103563 -1 2094 LSC 0.006247 13 13 300 9 no 1.000000 2 1.000000 NA 0.993792 47.400000 IGS_084 igs clpP1|psbB clpP1-psbB 103564 104011 0 448 LSC 0.004464 2 0 103 278 no 1.000000 2 1.000000 NA 1.000000 50.900000 psbB gene psbB psbB 104012 105538 1 1527 LSC 0.005239 8 0 160 24 no 1.000000 2 1.000000 NA 1.000000 48.500000 IGS_085 igs psbB|psbT psbB-psbT 105539 105722 0 184 LSC 0.005435 1 0 51 149 no 1.000000 2 1.000000 NA 1.000000 44.500000 psbT gene psbT psbT 105723 105830 1 108 LSC 0.000000 0 0 159 41 no 0.000000 1 0.000000 NA 1.000000 21.800000 IGS_086 igs psbT|pbf1 psbT-pbf1 105831 105897 0 67 LSC 0.014925 1 0 267 28 no 1.000000 2 1.000000 NA 1.000000 48.200000 pbf1 gene pbf1 pbf1 105898 106029 -1 132 LSC 0.007576 1 0 25 36 no 1.000000 2 1.000000 NA 1.000000 43.700000 IGS_087 igs pbf1|psbH pbf1-psbH 106030 106134 0 105 LSC 0.028571 3 0 103 152 no 1.000000 2 1.000000 NA 1.000000 61.700000 psbH gene psbH psbH 106135 106356 1 222 LSC 0.004505 1 0 11 207 no 1.000000 2 1.000000 NA 1.000000 40.900000 IGS_088 igs psbH|petB psbH-petB 106357 106463 0 107 LSC 0.000000 0 0 69 100 no 0.000000 1 0.000000 NA 1.000000 23.900000 petB gene petB petB 106464 107900 1 1437 LSC 0.006281 9 4 176 136 no 1.000000 2 1.000000 NA 0.997216 57.800000 IGS_089 igs petB|petD petB-petD 107901 108104 0 204 LSC 0.004902 1 0 9 110 no 1.000000 2 1.000000 NA 1.000000 41.000000 petD gene petD petD 108105 109326 1 1222 LSC 0.012295 15 2 67 46 no 1.000000 2 1.000000 NA 0.998363 54.400000 IGS_090 igs petD|rpoA petD-rpoA 109327 110727 0 1401 LSC 0.029126 6 1195 81 54 no 1.000000 2 1.000000 NA 0.147038 50.800000 rpoA gene rpoA rpoA 110728 111747 -1 1020 LSC 0.004902 5 0 30 162 no 1.000000 2 1.000000 NA 1.000000 48.800000 IGS_091 igs rpoA|rps11 rpoA-rps11 111748 111829 0 82 LSC 0.000000 0 5 107 80 no 1.000000 2 1.000000 NA 0.939024 48.000000 rps11 gene rps11 rps11 111830 112246 -1 417 LSC 0.007194 3 0 189 62 no 1.000000 2 1.000000 NA 1.000000 48.700000 IGS_092 igs rps11|rpl36 rps11-rpl36 112247 112364 0 118 LSC 0.008850 1 5 188 94 no 1.000000 2 1.000000 NA 0.957627 53.700000 rpl36 gene rpl36 rpl36 112365 112478 -1 114 LSC 0.008772 1 0 55 55 no 1.000000 2 1.000000 NA 1.000000 46.700000 IGS_093 igs rpl36|rps8 rpl36-rps8 112479 112857 0 379 LSC 0.023747 9 0 19 18 no 1.000000 2 1.000000 NA 1.000000 54.200000 rps8 gene rps8 rps8 112858 113256 -1 399 LSC 0.010025 4 0 36 86 no 1.000000 2 1.000000 NA 1.000000 48.000000 IGS_094 igs rps8|rpl14 rps8-rpl14 113257 113435 0 179 LSC 0.006211 1 18 48 62 no 1.000000 2 1.000000 NA 0.899441 48.000000 rpl14 gene rpl14 rpl14 113436 113804 -1 369 LSC 0.008130 3 0 92 30 no 1.000000 2 1.000000 NA 1.000000 45.900000 IGS_095 igs rpl14|rpl16 rpl14-rpl16 113805 113930 0 126 LSC 0.007937 1 0 91 66 no 1.000000 2 1.000000 NA 1.000000 47.000000 rpl16 gene rpl16 rpl16 113931 115699 -1 1769 LSC 0.019868 33 108 95 94 no 1.000000 2 1.000000 NA 0.938949 66.000000 IGS_096 igs rpl16|rps3 rpl16-rps3 115700 115856 0 157 LSC 0.006369 1 0 113 60 no 1.000000 2 1.000000 NA 1.000000 45.700000 rps3 gene rps3 rps3 115857 116513 -1 657 LSC 0.007610 5 0 62 61 no 1.000000 2 1.000000 NA 1.000000 52.700000 IGS_097 igs rps3|rpl22 rps3-rpl22 116514 116560 0 47 LSC 0.000000 0 0 189 14 no 0.000000 1 0.000000 NA 1.000000 19.800000 rpl22 gene rpl22 rpl22 116561 116950 -1 390 LSC 0.010256 4 0 236 116 no 1.000000 2 1.000000 NA 1.000000 54.000000 IGS_098 igs rpl22|rps19 rpl22-rps19 116951 117650 0 700 LSC 0.036364 4 590 131 38 no 1.000000 2 1.000000 NA 0.157143 53.100000 rps19 gene rps19 rps19 117651 117929 -1 279 LSC 0.010753 3 0 226 28 no 1.000000 2 1.000000 NA 1.000000 45.800000 IGS_099 igs rps19|rpl2 rps19-rpl2 117930 118008 0 79 IRa 0.014493 1 10 139 300 no 1.000000 2 1.000000 NA 0.873418 58.700000 rpl2 gene rpl2 rpl2 118009 119494 -1 1486 IRa 0.000000 0 0 50 300 no 0.000000 1 0.000000 NA 1.000000 28.700000 IGS_100 igs rpl2|rpl23 rpl2-rpl23 119495 119512 0 18 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rpl23 gene rpl23 rpl23 119513 119806 -1 294 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_101 igs rpl23|trnI-CAU rpl23-trnI-CAU 119807 119972 0 166 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnI-CAU tRNA trnI-CAU trnI-CAU 119973 120046 -1 74 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_102 igs trnI-CAU|ycf2 trnI-CAU-ycf2 120047 120114 0 68 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 ycf2 gene ycf2 ycf2 120115 126936 1 6822 IRa 0.000880 6 0 300 300 no 1.000000 2 1.000000 NA 1.000000 53.000000 IGS_103 igs ycf2|trnL-CAA ycf2-trnL-CAA 126937 127859 0 923 IRa 0.001083 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 59.400000 trnL-CAA tRNA trnL-CAA trnL-CAA 127860 127940 -1 81 IRa 0.000000 0 0 300 243 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_104 igs trnL-CAA|ndhB trnL-CAA-ndhB 127941 128919 0 979 IRa 0.011944 11 58 300 75 no 1.000000 2 1.000000 NA 0.940756 60.700000 ndhB gene ndhB ndhB 128920 131132 -1 2213 IRa 0.001357 3 2 300 300 no 1.000000 2 1.000000 NA 0.999096 58.100000 IGS_105 igs ndhB|rps7 ndhB-rps7 131133 131459 0 327 IRa 0.000000 0 0 92 300 no 0.000000 1 0.000000 NA 1.000000 26.200000 rps7 gene rps7 rps7 131460 131927 -1 468 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 37.300000 IGS_106 igs rps7|rps12 rps7-rps12 131928 131981 0 54 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rps12_part2 gene rps12 rps12 131982 132785 -1 804 IRa 0.001244 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 59.500000 IGS_107 igs rps12|trnV-GAC rps12-trnV-GAC 132786 134667 0 1882 IRa 0.001598 3 5 300 300 no 1.000000 2 1.000000 NA 0.997343 59.100000 trnV-GAC tRNA trnV-GAC trnV-GAC 134668 134739 1 72 SSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_108 igs trnV-GAC|rrn16 trnV-GAC-rrn16 134740 134966 0 227 SSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rrn16 rRNA rrn16 rrn16 134967 136457 1 1491 SSC 0.000000 0 0 300 267 no 0.000000 1 0.000000 NA 1.000000 40.000000 IGS_109 igs rrn16|trnI-GAU rrn16-trnI-GAU 136458 136752 0 295 SSC 0.013559 4 0 300 195 no 1.000000 2 1.000000 NA 1.000000 59.900000 trnI-GAU_part1 tRNA trnI-GAU trnI-GAU 136753 136789 1 37 SSC 0.000000 0 0 16 158 no 0.000000 1 0.000000 NA 1.000000 20.000000 trnI-GAU_part2 tRNA trnI-GAU trnI-GAU 137729 137763 1 35 SSC 0.000000 0 0 300 247 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_112 igs trnI-GAU|trnA-UGC trnI-GAU-trnA-UGC 137764 137827 0 64 SSC 0.000000 0 0 300 183 no 0.000000 1 0.000000 NA 1.000000 32.500000 trnA-UGC_part1 tRNA trnA-UGC trnA-UGC 137828 137865 1 38 SSC 0.000000 0 0 300 145 no 0.000000 1 0.000000 NA 1.000000 29.600000 trnA-UGC_part2 tRNA trnA-UGC trnA-UGC 138655 138689 1 35 SSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_115 igs trnA-UGC|rrn23 trnA-UGC-rrn23 138690 138834 0 145 SSC 0.000000 0 0 300 261 no 0.000000 1 0.000000 NA 1.000000 33.800000 rrn23 rRNA rrn23 rrn23 138835 141445 1 2611 SSC 0.001532 4 0 300 300 no 1.000000 2 1.000000 NA 1.000000 57.300000 IGS_116 igs rrn23|rrn4.5 rrn23-rrn4.5 141446 141742 0 297 SSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rrn4.5 rRNA rrn4.5 rrn4.5 141743 141845 1 103 SSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_117 igs rrn4.5|rrn5 rrn4.5-rrn5 141846 142068 0 223 SSC 0.000000 0 0 300 242 no 0.000000 1 0.000000 NA 1.000000 33.800000 rrn5 rRNA rrn5 rrn5 142069 142189 1 121 SSC 0.000000 0 0 300 121 no 0.000000 1 0.000000 NA 1.000000 27.800000 IGS_118 igs rrn5|trnR-ACG rrn5-trnR-ACG 142190 142433 0 244 SSC 0.008197 2 0 300 116 no 1.000000 2 1.000000 NA 1.000000 50.900000 trnR-ACG tRNA trnR-ACG trnR-ACG 142434 142507 1 74 SSC 0.000000 0 0 70 42 no 0.000000 1 0.000000 NA 1.000000 21.900000 IGS_119 igs trnR-ACG|trnN-GUU trnR-ACG-trnN-GUU 142508 143088 0 581 SSC 0.005164 3 0 144 300 no 1.000000 2 1.000000 NA 1.000000 57.100000 trnN-GUU tRNA trnN-GUU trnN-GUU 143089 143160 -1 72 SSC 0.000000 0 0 300 236 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_120 igs trnN-GUU|ycf1 trnN-GUU-ycf1 143161 143647 0 487 SSC 0.014957 7 19 300 300 no 1.000000 2 1.000000 NA 0.960986 68.700000 ycf1 gene ycf1 ycf1 143648 149161 1 5514 SSC 0.001814 10 0 35 28 no 1.000000 2 1.000000 NA 1.000000 40.600000 IGS_121 igs ycf1|rps15 ycf1-rps15 149162 150395 0 1234 SSC 0.052459 48 319 300 300 yes 1.000000 2 1.000000 NA 0.741491 85.100000 rps15 gene rps15 rps15 150396 150674 1 279 SSC 0.000000 0 0 289 87 no 0.000000 1 0.000000 NA 1.000000 25.300000 IGS_122 igs rps15|psaC rps15-psaC 150675 152893 0 2219 SSC 0.017424 28 612 300 58 no 1.000000 2 1.000000 NA 0.724200 54.500000 psaC gene psaC psaC 152894 153139 1 246 SSC 0.016260 4 0 116 16 no 1.000000 2 1.000000 NA 1.000000 48.000000 IGS_123 igs psaC|ndhD psaC-ndhD 153140 153813 0 674 SSC 0.017857 12 2 79 16 no 1.000000 2 1.000000 NA 0.997033 55.500000 ndhD gene ndhD ndhD 153814 154764 1 951 SSC 0.016824 16 0 79 62 no 1.000000 2 1.000000 NA 1.000000 58.100000 IGS_124 igs ndhD|ccsA ndhD-ccsA 154765 154990 0 226 SSC 0.004464 1 2 84 112 no 1.000000 2 1.000000 NA 0.991150 47.200000 ccsA gene ccsA ccsA 154991 155956 -1 966 SSC 0.011387 11 0 163 4 no 1.000000 2 1.000000 NA 1.000000 50.600000 IGS_125 igs ccsA|trnL-UAG ccsA-trnL-UAG 155957 156044 0 88 SSC 0.022727 2 0 112 82 no 1.000000 2 1.000000 NA 1.000000 56.700000 trnL-UAG tRNA trnL-UAG trnL-UAG 156045 156124 -1 80 SSC 0.000000 0 0 10 2 no 0.000000 1 0.000000 NA 1.000000 18.900000 IGS_126 igs trnL-UAG|rpl32 trnL-UAG-rpl32 156125 156657 0 533 SSC 0.027778 14 29 90 11 no 1.000000 2 1.000000 NA 0.945591 63.700000 rpl32 gene rpl32 rpl32 156658 156837 -1 180 SSC 0.027778 5 0 254 52 no 1.000000 2 1.000000 NA 1.000000 57.400000 IGS_127 igs rpl32|ycf1 rpl32-ycf1 156838 158669 0 1832 SSC 0.186176 334 38 79 300 yes 1.000000 2 1.000000 NA 0.979258 86.000000 ycf1 gene ycf1 ycf1 158670 164183 -1 5514 SSC 0.001814 10 0 28 35 no 1.000000 2 1.000000 NA 1.000000 40.600000 IGS_128 igs ycf1|trnN-GUU ycf1-trnN-GUU 164184 164670 0 487 SSC 0.014957 7 19 300 300 no 1.000000 2 1.000000 NA 0.960986 68.700000 trnN-GUU tRNA trnN-GUU trnN-GUU 164671 164742 1 72 SSC 0.000000 0 0 235 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_129 igs trnN-GUU|trnR-ACG trnN-GUU-trnR-ACG 164743 165323 0 581 SSC 0.005164 3 0 300 144 no 1.000000 2 1.000000 NA 1.000000 57.100000 trnR-ACG tRNA trnR-ACG trnR-ACG 165324 165397 -1 74 SSC 0.000000 0 0 42 70 no 0.000000 1 0.000000 NA 1.000000 21.900000 IGS_130 igs trnR-ACG|rrn5 trnR-ACG-rrn5 165398 165641 0 244 SSC 0.008197 2 0 116 300 no 1.000000 2 1.000000 NA 1.000000 50.900000 rrn5 rRNA rrn5 rrn5 165642 165762 -1 121 SSC 0.000000 0 0 121 300 no 0.000000 1 0.000000 NA 1.000000 27.800000 IGS_131 igs rrn5|rrn4.5 rrn5-rrn4.5 165763 165985 0 223 SSC 0.000000 0 0 242 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rrn4.5 rRNA rrn4.5 rrn4.5 165986 166088 -1 103 SSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_132 igs rrn4.5|rrn23 rrn4.5-rrn23 166089 166385 0 297 SSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rrn23 rRNA rrn23 rrn23 166386 168996 -1 2611 SSC 0.001532 4 0 300 300 no 1.000000 2 1.000000 NA 1.000000 57.300000 IGS_133 igs rrn23|trnA-UGC rrn23-trnA-UGC 168997 169141 0 145 SSC 0.000000 0 0 261 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnA-UGC_part2 tRNA trnA-UGC trnA-UGC 169142 169176 -1 35 SSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnA-UGC_part1 tRNA trnA-UGC trnA-UGC 169966 170003 -1 38 SSC 0.000000 0 0 145 300 no 0.000000 1 0.000000 NA 1.000000 29.600000 IGS_136 igs trnA-UGC|trnI-GAU trnA-UGC-trnI-GAU 170004 170067 0 64 SSC 0.000000 0 0 183 300 no 0.000000 1 0.000000 NA 1.000000 32.500000 trnI-GAU_part2 tRNA trnI-GAU trnI-GAU 170068 170102 -1 35 SSC 0.000000 0 0 247 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnI-GAU_part1 tRNA trnI-GAU trnI-GAU 171042 171078 -1 37 SSC 0.000000 0 0 158 16 no 0.000000 1 0.000000 NA 1.000000 20.000000 IGS_139 igs trnI-GAU|rrn16 trnI-GAU-rrn16 171079 171373 0 295 SSC 0.013559 4 0 195 300 no 1.000000 2 1.000000 NA 1.000000 59.900000 rrn16 rRNA rrn16 rrn16 171374 172864 -1 1491 SSC 0.000000 0 0 267 300 no 0.000000 1 0.000000 NA 1.000000 40.000000 IGS_140 igs rrn16|trnV-GAC rrn16-trnV-GAC 172865 173091 0 227 SSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnV-GAC tRNA trnV-GAC trnV-GAC 173092 173163 -1 72 SSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_141 igs trnV-GAC|rps12 trnV-GAC-rps12 173164 1859 0 1882 IRb 0.000000 0 1859 300 300 no 1.000000 2 1.000000 NA 0.012221 45.600000