Hotspot

trnV-GAC

IRa · 142051-142122 · 72 bp

Back to Cnidoscolus

Pi 0.0139
MarkerSeek score 60.50
Primer available yes
Label trnV-GAC

Feature Metadata

Pi Curve

Haplotype Network

Species Separation

Primer Ranking

Primer ID fwd_seq rev_seq fwd_gc rev_gc fwd_tm rev_tm amplicon_size cross_species_success_rate primer_score
trnV-GAC_p1 TAGTGGCGTTGAGTTTCTCG TCAATCCCACGAGCCTCTTA 50.0 50.0 57.9 58.1 225 bp 1.0 78.8
trnV-GAC_p2 TAGTGCGAAAAGAAGGTCCG TCAATCCCACGAGCCTCTTA 50.0 50.0 57.9 58.1 264 bp 1.0 78.6
trnV-GAC_p3 GAAGGTCCGACTCCAAGTTG TCAATCCCACGAGCCTCTTA 55.0 50.0 58.2 58.1 253 bp 1.0 77.6
trnV-GAC_p4 GTCCGACTCCAAGTTGTTCA TCAATCCCACGAGCCTCTTA 50.0 50.0 57.8 58.1 249 bp 1.0 77.3
trnV-GAC_p5 AGAAGGTCCGACTCCAAGTT TCAATCCCACGAGCCTCTTA 50.0 50.0 58.3 58.1 254 bp 1.0 76.9
trnV-GAC_p1 TCAATCCCACGAGCCTCTTA TAGTGGCGTTGAGTTTCTCG 50.0 50.0 58.1 57.9 225 bp 1.0 78.8
trnV-GAC_p2 TCAATCCCACGAGCCTCTTA TAGTGCGAAAAGAAGGTCCG 50.0 50.0 58.1 57.9 264 bp 1.0 78.6
trnV-GAC_p3 TCAATCCCACGAGCCTCTTA GAAGGTCCGACTCCAAGTTG 50.0 55.0 58.1 58.2 253 bp 1.0 77.6
trnV-GAC_p4 TCAATCCCACGAGCCTCTTA GTCCGACTCCAAGTTGTTCA 50.0 50.0 58.1 57.8 249 bp 1.0 77.3
trnV-GAC_p5 TCAATCCCACGAGCCTCTTA AGAAGGTCCGACTCCAAGTT 50.0 50.0 58.1 58.3 254 bp 1.0 76.9