primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnQ-UUG-psbK_p1 trnQ-UUG-psbK 1 CCGTACACTCGATCACGTTT CTTACAGCAGCTTGCCAAAC 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.082956 7260 7597 757-759 1.000000 80.9 trnQ-UUG-psbK_p2 trnQ-UUG-psbK 2 AACAAAAGGCGGGATCACAT CTTACAGCAGCTTGCCAAAC 20 20 45.0 50.0 58.1 57.9 0.0 0.0 0.132739 7260 7597 675-677 1.000000 80.4 trnQ-UUG-psbK_p3 trnQ-UUG-psbK 3 ACAAAAGGCGGGATCACATT CTTACAGCAGCTTGCCAAAC 20 20 45.0 50.0 58.1 57.9 0.0 0.0 0.132739 7260 7597 674-676 1.000000 80.4 trnQ-UUG-psbK_p4 trnQ-UUG-psbK 4 TCAGAACAAAAGGCGGGATC CTTACAGCAGCTTGCCAAAC 20 20 50.0 50.0 58.2 57.9 0.0 0.0 0.234878 7260 7597 679-681 1.000000 79.5 trnQ-UUG-psbK_p5 trnQ-UUG-psbK 5 CCGTACACTCGATCACGTTT TGGAAGGTCAGAACGAGGAA 20 20 50.0 50.0 58.0 58.3 0.0 0.0 0.314806 7260 7597 938-940 1.000000 79.0 psbK-psbI_p1 psbK-psbI 1 GTTTGGCAAGCTGCTGTAAG GGCCCGGATCGTTAGATAAG 20 20 50.0 55.0 57.9 57.6 1.4 0.7 0.421502 7784 8187 521-531 1.000000 78.0 psbK-psbI_p2 psbK-psbI 2 TGGCAAGCTGCTGTAAGTTT GGCCCGGATCGTTAGATAAG 20 20 45.0 55.0 58.3 57.6 1.4 0.7 0.674211 7784 8187 518-528 1.000000 76.0 psbK-psbI_p3 psbK-psbI 3 TTGGCAAGCTGCTGTAAGTT GGCCCGGATCGTTAGATAAG 20 20 45.0 55.0 58.3 57.6 1.4 0.7 0.674211 7784 8187 519-529 1.000000 76.0 psbK-psbI_p4 psbK-psbI 4 TTTGGCAAGCTGCTGTAAGT GGCCCGGATCGTTAGATAAG 20 20 45.0 55.0 58.3 57.6 1.4 0.7 0.674211 7784 8187 520-530 1.000000 76.0 psbK-psbI_p5 psbK-psbI 5 GTTTGGCAAGCTGCTGTAAG TTTTTATTCCTCGCGTCCGG 20 20 50.0 50.0 57.9 58.6 1.4 5.8 0.694301 7784 8187 547-557 1.000000 75.8 psbI-trnS-GCU_p1 psbI-trnS-GCU 1 CTTATCTAACGATCCGGGCC TAAAGCGGCGGATTGCTAAT 20 20 55.0 45.0 57.6 58.0 0.0 9.8 0.403614 8299 8414 227-237 1.000000 80.2 psbI-trnS-GCU_p2 psbI-trnS-GCU 2 CTTATCTAACGATCCGGGCC GGGTTCGAATCCCTCTCTCT 20 20 55.0 55.0 57.6 58.2 0.0 17.2 0.582336 8299 8414 182-192 1.000000 79.6 psbI-trnS-GCU_p3 psbI-trnS-GCU 3 CTTATCTAACGATCCGGGCC TTCGAATCCCTCTCTCTCCG 20 20 55.0 55.0 57.6 58.3 0.0 0.0 0.683870 8299 8414 179-189 1.000000 78.9 psbI-trnS-GCU_p4 psbI-trnS-GCU 4 CTTATCTAACGATCCGGGCC GATGGCTGAGCGGACTAAAG 20 20 55.0 55.0 57.6 58.4 0.0 0.0 0.789052 8299 8414 242-252 1.000000 76.9 psbI-trnS-GCU_p5 psbI-trnS-GCU 5 CTTATCTAACGATCCGGGCC CTAAAGCGGCGGATTGCTAA 20 20 55.0 50.0 57.6 58.7 0.0 9.8 1.069616 8299 8414 228-238 1.000000 74.9 atpF_p1 atpF 1 CGCTCCTGGAAAGTAGTCAC CCTTCCCGTCCTTCGTTTAG 20 20 55.0 55.0 58.0 58.0 0.0 0.0 0.008301 12321 13750 2415-2449 1.000000 83.2 atpF_p2 atpF 2 CGCTCCTGGAAAGTAGTCAC CCGGGAAGGACTGATTTGAG 20 20 55.0 55.0 58.0 58.0 0.0 0.0 0.032169 12321 13750 2467-2501 1.000000 82.9 atpF_p3 atpF 3 CGCTCCTGGAAAGTAGTCAC CGGGAAGGACTGATTTGAGG 20 20 55.0 55.0 58.0 58.0 0.0 0.0 0.032169 12321 13750 2466-2500 1.000000 82.9 atpF_p4 atpF 4 CGCTCCTGGAAAGTAGTCAC CTCATTGCCGTTTGCTTCTG 20 20 55.0 50.0 58.0 58.0 0.0 0.0 0.029193 12321 13750 2540-2574 1.000000 82.8 atpF_p5 atpF 5 CCGAGATTCAGAAGCGGAAA CCTTCCCGTCCTTCGTTTAG 20 20 50.0 55.0 58.0 58.0 13.8 0.0 0.016116 12321 13750 2152-2186 0.571429 65.7 trnC-GCA-petN_p1 trnC-GCA-petN 1 CCAGTTCAAATCCGGGTGTC TTAAAGCAGCCCAAGCAAGA 20 20 55.0 45.0 58.8 58.0 0.0 0.0 0.840774 28406 29462 1115-1122 1.000000 75.4 trnC-GCA-petN_p2 trnC-GCA-petN 2 CCAGTTCAAATCCGGGTGTC CAGCCCAAGCAAGACTTACT 20 20 55.0 50.0 58.8 57.8 0.0 0.0 1.025858 28406 29462 1109-1116 1.000000 73.9 trnC-GCA-petN_p3 trnC-GCA-petN 3 CAGTTCAAATCCGGGTGTCG TTAAAGCAGCCCAAGCAAGA 20 20 55.0 45.0 59.2 58.0 0.0 0.0 1.209732 28406 29462 1114-1121 1.000000 72.5 trnC-GCA-petN_p4 trnC-GCA-petN 4 AGTTCAAATCCGGGTGTCG TTAAAGCAGCCCAAGCAAGA 19 20 52.6 45.0 57.8 58.0 0.0 0.0 1.232928 28406 29462 1113-1120 1.000000 72.3 trnC-GCA-petN_p5 trnC-GCA-petN 5 CCAGTTCAAATCCGGGTGT TTAAAGCAGCCCAAGCAAGA 19 20 52.6 45.0 57.7 58.0 0.0 0.0 1.345591 28406 29462 1115-1122 1.000000 71.4 petN-psbM_p1 petN-psbM 1 TCTTGCTTGGGCTGCTTTAA AAAACAGTCAGCCAAAATGA 20 20 45.0 35.0 58.0 53.9 0.0 0.0 4.124478 29553 30557 1105-1115 1.000000 49.9 petN-psbM_p2 petN-psbM 2 TCTTGCTTGGGCTGCTTTAA AAAAACAGTCAGCCAAAATGA 20 21 45.0 33.3 58.0 54.8 0.0 0.0 4.251013 29553 30557 1106-1116 1.000000 48.9 petN-psbM_p3 petN-psbM 3 AGTAAGTCTTGCTTGGGCTG AAAACAGTCAGCCAAAATGA 20 20 50.0 35.0 57.8 53.9 0.0 0.0 4.309562 29553 30557 1111-1121 1.000000 48.4 petN-psbM_p4 petN-psbM 4 TCTTGCTTGGGCTGCTTTAA AAACAGTCAGCCAAAATGAT 20 20 45.0 35.0 58.0 53.6 0.0 0.0 4.367211 29553 30557 1104-1114 1.000000 48.0 petN-psbM_p5 petN-psbM 5 TCTTGCTTGGGCTGCTTTAA AACAGTCAGCCAAAATGATT 20 20 45.0 35.0 58.0 53.6 0.0 0.0 4.367211 29553 30557 1103-1113 1.000000 48.0 trnE-UUC-trnT-GGU_p1 trnE-UUC-trnT-GGU 1 TTTCGTAGTACCCTACCCCC GAACCGATGACTTACGCCTT 20 20 55.0 50.0 57.8 58.0 0.0 0.0 0.165150 32372 33078 632-863 1.000000 84.0 trnE-UUC-trnT-GGU_p2 trnE-UUC-trnT-GGU 2 TTTCGTAGTACCCTACCCCC CCATGGCGTTACTCTACCAC 20 20 55.0 55.0 57.8 58.1 0.0 0.0 0.223247 32372 33078 611-842 1.000000 83.6 trnE-UUC-trnT-GGU_p3 trnE-UUC-trnT-GGU 3 TTTCGTAGTACCCTACCCCC TGGCGTTACTCTACCACTGA 20 20 55.0 50.0 57.8 58.1 0.0 0.0 0.245401 32372 33078 608-839 1.000000 83.4 trnE-UUC-trnT-GGU_p4 trnE-UUC-trnT-GGU 4 GCTGCCTCCTTGAAAGAGAG GAACCGATGACTTACGCCTT 20 20 55.0 50.0 58.3 58.0 0.0 0.0 0.269359 32372 33078 594-825 1.000000 83.2 trnE-UUC-trnT-GGU_p5 trnE-UUC-trnT-GGU 5 TGTCCTGAACCACTAGACGA GAACCGATGACTTACGCCTT 20 20 50.0 50.0 57.7 58.0 0.0 0.0 0.287509 32372 33078 573-804 1.000000 83.1 trnT-UGU-trnL-UAA_p1 trnT-UGU-trnL-UAA 1 GCGATGCTCTAACCTCTGAG ACCAATTTCGCCATATCCCC 20 20 55.0 50.0 57.9 58.0 0.0 0.0 0.137364 47700 48740 1024-1091 1.000000 84.4 trnT-UGU-trnL-UAA_p2 trnT-UGU-trnL-UAA 2 GCGATGCTCTAACCTCTGAG TAGCGTCTACCAATTTCGCC 20 20 55.0 50.0 57.9 58.1 0.0 0.0 0.202173 47700 48740 1032-1099 1.000000 83.9 trnT-UGU-trnL-UAA_p3 trnT-UGU-trnL-UAA 3 GGAATCGAACCGATGACCAT ACCAATTTCGCCATATCCCC 20 20 50.0 50.0 57.8 58.0 15.5 0.0 0.245117 47700 48740 1056-1123 1.000000 83.5 trnT-UGU-trnL-UAA_p4 trnT-UGU-trnL-UAA 4 GGAATCGAACCGATGACCAT TAGCGTCTACCAATTTCGCC 20 20 50.0 50.0 57.8 58.1 15.5 0.0 0.309926 47700 48740 1064-1131 1.000000 83.0 trnT-UGU-trnL-UAA_p5 trnT-UGU-trnL-UAA 5 GCGATGCTCTAACCTCTGAG ATCCAATCAAGTCCGTAGCG 20 20 55.0 50.0 57.9 57.8 0.0 0.0 0.357808 47700 48740 1047-1114 1.000000 82.6 ndhC-trnV-UAC_p1 ndhC-trnV-UAC 1 TGCCAAGATAGGAATAGCACC AGAAGGTCTACGGTTCGAGT 21 20 47.6 50.0 57.5 57.8 0.0 0.0 1.689385 52149 53747 1335-1730 1.000000 72.2 ndhC-trnV-UAC_p2 ndhC-trnV-UAC 2 TGCCAAGATAGGAATAGCACC AGCCCAATGCAACAAAATGC 21 20 47.6 45.0 57.5 58.5 0.0 0.0 1.966161 52149 53747 1417-1812 1.000000 69.9 ndhC-trnV-UAC_p3 ndhC-trnV-UAC 3 GCCAAGATAGGAATAGCACCT AGAAGGTCTACGGTTCGAGT 21 20 47.6 50.0 57.2 57.8 0.0 0.0 1.976237 52149 53747 1334-1729 1.000000 69.9 ndhC-trnV-UAC_p4 ndhC-trnV-UAC 4 TGCCAAGATAGGAATAGCACC GAAGGTCTACGGTTCGAGTC 21 20 47.6 55.0 57.5 57.5 0.0 0.0 2.033157 52149 53747 1334-1729 1.000000 69.5 ndhC-trnV-UAC_p5 ndhC-trnV-UAC 5 TGCCAAGATAGGAATAGCACC GTTCGAGTCCGTATAGCCCT 21 20 47.6 55.0 57.5 58.7 0.0 0.0 2.175451 52149 53747 1323-1718 1.000000 68.4 rbcL-accD_p1 rbcL-accD 1 ACTACAGTTCGGTGGAGGAA CTTCCACCGGTATGTCCAAG 20 20 50.0 55.0 58.0 58.0 0.0 6.9 0.029546 58960 59754 1130-1149 1.000000 83.3 rbcL-accD_p2 rbcL-accD 2 GCAGTAGCTAATCGGGTAGC CTTCCACCGGTATGTCCAAG 20 20 55.0 55.0 57.9 58.0 9.5 6.9 0.091590 58960 59754 1078-1097 1.000000 83.0 rbcL-accD_p3 rbcL-accD 3 GAAGGGGAACGTGAGATGAC CTTCCACCGGTATGTCCAAG 20 20 55.0 55.0 58.0 58.0 0.0 6.9 0.035716 58960 59754 1321-1340 1.000000 82.7 rbcL-accD_p4 rbcL-accD 4 GCGACAACGGTCTACTTCTT CTTCCACCGGTATGTCCAAG 20 20 50.0 55.0 57.9 58.0 0.0 6.9 0.085915 58960 59754 1473-1492 1.000000 82.1 rbcL-accD_p5 rbcL-accD 5 CGGCGGTACAGTAGTAGGTA CTTCCACCGGTATGTCCAAG 20 20 55.0 55.0 58.0 58.0 0.0 6.9 0.070617 58960 59754 1346-1365 0.714286 71.0 ycf4-cemA_p1 ycf4-cemA 1 TGCGCGTACCAATTGAAGTA ATGAGAGAGAGACCCACCAG 20 20 45.0 55.0 57.9 57.8 8.4 0.0 0.239365 62658 63455 878-967 1.000000 83.0 ycf4-cemA_p2 ycf4-cemA 2 CTTGCGCGTACCAATTGAAG ATGAGAGAGAGACCCACCAG 20 20 50.0 55.0 58.1 57.8 8.4 0.0 0.275442 62658 63455 880-969 1.000000 82.7 ycf4-cemA_p3 ycf4-cemA 3 TGCGCGTACCAATTGAAGTA GGGAGGGAAGTCAATGCTTT 20 20 45.0 50.0 57.9 57.8 8.4 0.0 0.303952 62658 63455 831-920 1.000000 82.7 ycf4-cemA_p4 ycf4-cemA 4 CTTGCGCGTACCAATTGAAG GGGAGGGAAGTCAATGCTTT 20 20 50.0 50.0 58.1 57.8 8.4 0.0 0.340029 62658 63455 833-922 1.000000 82.4 ycf4-cemA_p5 ycf4-cemA 5 GGAACCATTCCCTTGACTCG ATGAGAGAGAGACCCACCAG 20 20 55.0 55.0 58.3 57.8 0.0 0.0 0.418573 62658 63455 960-1049 1.000000 81.1 petA-psbJ_p1 petA-psbJ 1 GGCCTTTTGTTCTTCTTGGC GGTTCATATTCCGGGTTGGG 20 20 50.0 55.0 57.8 58.3 0.0 0.0 0.467291 65326 66455 1263-1271 1.000000 79.2 petA-psbJ_p2 petA-psbJ 2 GGCCTTTTGTTCTTCTTGGC CATATTCCGGGTTGGGTTCA 20 20 50.0 50.0 57.8 57.6 0.0 0.0 0.583398 65326 66455 1259-1267 1.000000 78.2 petA-psbJ_p3 petA-psbJ 3 GGCCTTTTGTTCTTCTTGGC GTTCATATTCCGGGTTGGGT 20 20 50.0 50.0 57.8 57.6 0.0 0.0 0.585102 65326 66455 1262-1270 1.000000 78.2 petA-psbJ_p4 petA-psbJ 4 GGCCTTTTGTTCTTCTTGGC CGGTTCATATTCCGGGTTGG 20 20 50.0 55.0 57.8 58.7 0.0 0.0 0.849653 65326 66455 1264-1272 1.000000 76.1 petA-psbJ_p5 petA-psbJ 5 GGCCTTTTGTTCTTCTTGGC TATTCCGGGTTGGGTTCATC 20 20 50.0 50.0 57.8 57.3 0.0 0.0 0.876279 65326 66455 1257-1265 1.000000 75.9 petG-trnW-CCA_p1 petG-trnW-CCA 1 CAATACAGACGCGGTGATCA CAAAACCCGATGTCGTAGGT 20 20 50.0 50.0 58.1 57.9 12.5 1.4 0.167706 68589 68709 189-193 1.000000 83.7 petG-trnW-CCA_p2 petG-trnW-CCA 2 ACAATACAGACGCGGTGATC CAAAACCCGATGTCGTAGGT 20 20 50.0 50.0 58.1 57.9 12.5 1.4 0.166379 68589 68709 190-194 1.000000 83.6 petG-trnW-CCA_p3 petG-trnW-CCA 3 CAATACAGACGCGGTGATCA AGCGCTCTTAGTTCAGTTCG 20 20 50.0 50.0 58.1 58.0 12.5 2.6 0.094784 68589 68709 225-229 1.000000 83.5 petG-trnW-CCA_p4 petG-trnW-CCA 4 ACAATACAGACGCGGTGATC AGCGCTCTTAGTTCAGTTCG 20 20 50.0 50.0 58.1 58.0 12.5 2.6 0.093457 68589 68709 226-230 1.000000 83.4 petG-trnW-CCA_p5 petG-trnW-CCA 5 CGGTGATCAGTTGGACCTTT AGCGCTCTTAGTTCAGTTCG 20 20 50.0 50.0 57.8 58.0 0.0 2.6 0.201032 68589 68709 214-218 1.000000 82.8 rps18-rpl20_p1 rps18-rpl20 1 TGGTCCTAGAACCAGAAATA AGAATTGTCTTTACATGATTTCCA 20 24 40.0 29.2 52.6 54.8 0.0 0.0 12.619849 70704 70964 327-333 1.000000 43.4 rps18-rpl20_p2 rps18-rpl20 2 TGGTCCTAGAACCAGAAATAA AGAATTGTCTTTACATGATTTCCA 21 24 38.1 29.2 53.6 54.8 0.0 0.0 12.665303 70704 70964 327-333 1.000000 43.4 rps18-rpl20_p3 rps18-rpl20 3 TGGTCCTAGAACCAGAAATAAA AGAATTGTCTTTACATGATTTCCA 22 24 36.4 29.2 54.4 54.8 0.0 0.0 12.798866 70704 70964 327-333 1.000000 43.4 rps18-rpl20_p4 rps18-rpl20 4 TGGTCCTAGAACCAGAAATA AAGAATTGTCTTTACATGATTTCCA 20 25 40.0 28.0 52.6 55.5 0.0 0.0 12.912126 70704 70964 328-334 1.000000 43.4 rps18-rpl20_p5 rps18-rpl20 5 TGGTCCTAGAACCAGAAATA AGAATTGTCTTTACATGATTTCCAA 20 25 40.0 28.0 52.6 55.5 0.0 0.0 12.912126 70704 70964 327-333 1.000000 43.4 rps12-trnV-GAC_p1 rps12-trnV-GAC 1 TGGCAACTTTACGTAAGGCA CGGGGGAGCAAGTCAAAATA 20 20 45.0 50.0 57.7 57.9 16.5 0.0 0.380474 101413 103223 1942-1968 1.000000 78.6 rps12-trnV-GAC_p2 rps12-trnV-GAC 2 TGGCAACTTTACGTAAGGCA GATGACTTCCACCACGTCAA 20 20 45.0 50.0 57.7 57.8 16.5 0.0 0.421509 101413 103223 1881-1907 1.000000 78.4 rps12-trnV-GAC_p3 rps12-trnV-GAC 3 TGGCAACTTTACGTAAGGCA AACTGATGACTTCCACCACG 20 20 45.0 50.0 57.7 57.8 16.5 0.0 0.427523 101413 103223 1885-1911 1.000000 78.3 rps12-trnV-GAC_p4 rps12-trnV-GAC 4 TGGCAACTTTACGTAAGGCA ATGACTTCCACCACGTCAAG 20 20 45.0 50.0 57.7 57.8 16.5 0.0 0.427523 101413 103223 1880-1906 1.000000 78.3 rps12-trnV-GAC_p5 rps12-trnV-GAC 5 TGGCAACTTTACGTAAGGCA CTGATGACTTCCACCACGTC 20 20 45.0 55.0 57.7 58.3 16.5 0.0 0.542896 101413 103223 1883-1909 1.000000 77.4 rrn4.5-rrn5_p1 rrn4.5-rrn5 1 CAGCTGAGGCATCCTAACAG AGTATCGTCACCGCAGTAGA 20 20 55.0 50.0 58.0 58.0 8.4 0.0 0.083276 110447 110663 333-338 1.000000 82.9 rrn4.5-rrn5_p2 rrn4.5-rrn5 2 CAGCTGAGGCATCCTAACAG TATCGTCACCGCAGTAGAGT 20 20 55.0 50.0 58.0 58.0 8.4 0.0 0.083276 110447 110663 331-336 1.000000 82.9 rrn4.5-rrn5_p3 rrn4.5-rrn5 3 GCTGAGGCATCCTAACAGAC TATCGTCACCGCAGTAGAGT 20 20 55.0 50.0 58.1 58.0 0.0 0.0 0.087359 110447 110663 329-334 1.000000 82.9 rrn4.5-rrn5_p4 rrn4.5-rrn5 4 GTCAAGTGGAAGTGCAGTGA AGTATCGTCACCGCAGTAGA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.080545 110447 110663 359-364 1.000000 82.7 rrn4.5-rrn5_p5 rrn4.5-rrn5 5 GTCAAGTGGAAGTGCAGTGA TATCGTCACCGCAGTAGAGT 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.080545 110447 110663 357-362 1.000000 82.7 rpl32-trnL-UAG_p1 rpl32-trnL-UAG 1 AGCAAAGTCAGTTTCTACCGG TCCTAAGAGCAGCGTGTCTA 21 20 47.6 50.0 58.2 57.9 0.0 0.0 1.356773 116317 117132 927-948 1.000000 71.3 rpl32-trnL-UAG_p2 rpl32-trnL-UAG 2 GCAAAGTCAGTTTCTACCGGA TCCTAAGAGCAGCGTGTCTA 21 20 47.6 50.0 58.2 57.9 9.5 0.0 1.361532 116317 117132 926-947 1.000000 71.2 rpl32-trnL-UAG_p3 rpl32-trnL-UAG 3 GCAAAGTCAGTTTCTACCGG TCCTAAGAGCAGCGTGTCTA 20 20 50.0 50.0 56.7 57.9 0.0 0.0 1.377200 116317 117132 926-947 1.000000 71.1 rpl32-trnL-UAG_p4 rpl32-trnL-UAG 4 AGCAAAGTCAGTTTCTACCGG AGCAGCGTGTCTACCAATTT 21 20 47.6 45.0 58.2 57.8 0.0 0.0 1.417499 116317 117132 920-941 1.000000 70.8 rpl32-trnL-UAG_p5 rpl32-trnL-UAG 5 GCAAAGTCAGTTTCTACCGGA AGCAGCGTGTCTACCAATTT 21 20 47.6 45.0 58.2 57.8 9.5 0.0 1.422259 116317 117132 919-940 1.000000 70.8 ccsA-ndhD_p1 ccsA-ndhD 1 CGAATTCGGCACTTGTAGCT TCCGGATTTCGTTCTTTCACT 20 21 50.0 42.9 58.6 57.6 20.2 0.0 2.036413 118257 118481 429-430 1.000000 66.7 ccsA-ndhD_p2 ccsA-ndhD 2 ATTCGGCACTTGTAGCTTCT TCCGGATTTCGTTCTTTCACT 20 21 45.0 42.9 57.2 57.6 0.0 0.0 2.166424 118257 118481 426-427 1.000000 65.7 ccsA-ndhD_p3 ccsA-ndhD 3 ACGAATTCGGCACTTGTAGC TCCGGATTTCGTTCTTTCACT 20 21 50.0 42.9 58.9 57.6 29.8 0.0 2.319928 118257 118481 430-431 1.000000 64.4 ccsA-ndhD_p4 ccsA-ndhD 4 AATTCGGCACTTGTAGCTTCT TCCGGATTTCGTTCTTTCACT 21 21 42.9 42.9 57.9 57.6 0.0 0.0 2.455612 118257 118481 427-428 1.000000 63.4 ccsA-ndhD_p5 ccsA-ndhD 5 CGAATTCGGCACTTGTAGCT TCCGGATTTCGTTCTTTCAC 20 20 50.0 45.0 58.6 56.1 20.2 0.0 2.551847 118257 118481 429-430 1.000000 62.6 ndhD_p1 ndhD 1 AGACTTTGCTTTCTGTCTCA TGGTCAAAACGTATCTTGTCT 20 21 40.0 38.1 54.5 55.2 0.0 0.0 7.279581 118482 119999 1564-1564 0.857143 35.2 ndhD_p2 ndhD 2 AAGACTTTGCTTTCTGTCTCA TGGTCAAAACGTATCTTGTCT 21 21 38.1 38.1 55.4 55.2 0.0 0.0 7.436933 118482 119999 1565-1565 0.857143 35.2 ndhD_p3 ndhD 3 AGACTTTGCTTTCTGTCTCA TGGTCAAAACGTATCTTGTCTT 20 22 40.0 36.4 54.5 56.0 0.0 0.0 7.507296 118482 119999 1564-1564 0.857143 35.2 ndhD_p4 ndhD 4 AGACTTTGCTTTCTGTCTCA TTGGTCAAAACGTATCTTGTCT 20 22 40.0 36.4 54.5 56.0 0.0 0.0 7.507296 118482 119999 1565-1565 0.857143 35.2 ndhD_p5 ndhD 5 AAGACTTTGCTTTCTGTCTCA TGGTCAAAACGTATCTTGTCTT 21 22 38.1 36.4 55.4 56.0 0.0 0.0 7.664649 118482 119999 1565-1565 0.857143 35.2 ycf1_p1 ycf1 1 TCTGGGAAAAACCAAGGTTCT GAGAATTCTCCATTTCTGTATTAGA 21 25 42.9 32.0 57.3 54.4 4.7 22.7 10.243107 128032 128151 201-255 1.000000 42.5 ycf1_p2 ycf1 2 TCTGGGAAAAACCAAGGTTCT AGAATTCTCCATTTCTGTATTAGA 21 24 42.9 29.2 57.3 53.2 4.7 0.9 10.443505 128032 128151 200-254 1.000000 42.5 ycf1_p3 ycf1 3 ACGCATCAAAAAGTAGCACA GAGAATTCTCCATTTCTGTATTAGA 20 25 40.0 32.0 56.3 54.4 0.0 22.7 10.289739 128032 128151 224-278 1.000000 42.3 ycf1_p4 ycf1 4 ACGCATCAAAAAGTAGCACA AGAATTCTCCATTTCTGTATTAGA 20 24 40.0 29.2 56.3 53.2 0.0 0.9 10.490137 128032 128151 223-277 1.000000 42.3 ycf1_p5 ycf1 5 ACGCATCAAAAAGTAGCACAA GAGAATTCTCCATTTCTGTATTAGA 21 25 38.1 32.0 57.0 54.4 0.0 22.7 10.542976 128032 128151 224-278 1.000000 42.3 rrn5-rrn4.5_p1 rrn5-rrn4.5 1 AGTATCGTCACCGCAGTAGA CAGCTGAGGCATCCTAACAG 20 20 50.0 55.0 58.0 58.0 0.0 8.4 0.083276 133723 133939 333-338 1.000000 82.9 rrn5-rrn4.5_p2 rrn5-rrn4.5 2 TATCGTCACCGCAGTAGAGT CAGCTGAGGCATCCTAACAG 20 20 50.0 55.0 58.0 58.0 0.0 8.4 0.083276 133723 133939 331-336 1.000000 82.9 rrn5-rrn4.5_p3 rrn5-rrn4.5 3 TATCGTCACCGCAGTAGAGT GCTGAGGCATCCTAACAGAC 20 20 50.0 55.0 58.0 58.1 0.0 0.0 0.087359 133723 133939 329-334 1.000000 82.9 rrn5-rrn4.5_p4 rrn5-rrn4.5 4 AGTATCGTCACCGCAGTAGA GTCAAGTGGAAGTGCAGTGA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.080545 133723 133939 359-364 1.000000 82.7 rrn5-rrn4.5_p5 rrn5-rrn4.5 5 TATCGTCACCGCAGTAGAGT GTCAAGTGGAAGTGCAGTGA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.080545 133723 133939 357-362 1.000000 82.7 trnV-GAC-rps12_p1 trnV-GAC-rps12 1 CGGGGGAGCAAGTCAAAATA TGGCAACTTTACGTAAGGCA 20 20 50.0 45.0 57.9 57.7 0.0 16.5 0.380474 141163 142973 1942-1968 1.000000 78.6 trnV-GAC-rps12_p2 trnV-GAC-rps12 2 GATGACTTCCACCACGTCAA TGGCAACTTTACGTAAGGCA 20 20 50.0 45.0 57.8 57.7 0.0 16.5 0.421509 141163 142973 1881-1907 1.000000 78.4 trnV-GAC-rps12_p3 trnV-GAC-rps12 3 AACTGATGACTTCCACCACG TGGCAACTTTACGTAAGGCA 20 20 50.0 45.0 57.8 57.7 0.0 16.5 0.427523 141163 142973 1885-1911 1.000000 78.3 trnV-GAC-rps12_p4 trnV-GAC-rps12 4 ATGACTTCCACCACGTCAAG TGGCAACTTTACGTAAGGCA 20 20 50.0 45.0 57.8 57.7 0.0 16.5 0.427523 141163 142973 1880-1906 1.000000 78.3 trnV-GAC-rps12_p5 trnV-GAC-rps12 5 CTGATGACTTCCACCACGTC TGGCAACTTTACGTAAGGCA 20 20 55.0 45.0 58.3 57.7 0.0 16.5 0.542896 141163 142973 1883-1909 1.000000 77.4