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psbC-trnS-UGA

LSC · 34417-34626 · 210 bp

Back to Climacoptera

Pi 0.119

MarkerSeek score 83.10

Primer available yes

Label psbC-trnS-UGA

Feature Metadata

label_name: psbC-trnS-UGA
feature_type: igs
region: LSC
length_bp: 210
variable_sites: 25
pi: 0.119
unique_haplotype_count: 2
primer_available: yes
alignment_reliability: 1.00
markerseek_score: 83.10

Pi Curve

Haplotype Network

Species Separation

Primer Ranking

Primer ID	fwd_seq	rev_seq	fwd_gc	rev_gc	fwd_tm	rev_tm	amplicon_size	cross_species_success_rate	primer_score
psbC-trnS-UGA_p1	AGCTGCAGCAGGATTTGAAA	GAGAGATGGCTGAGTGGTTG	45.0	55.0	58.4	58.0	375-377 bp	1.0	82.1
psbC-trnS-UGA_p2	AGCTGCAGCAGGATTTGAAA	GTTGGAGAGATGGCTGAGTG	45.0	55.0	58.4	58.0	379-381 bp	1.0	82.1
psbC-trnS-UGA_p3	AGCTGCAGCAGGATTTGAAA	GGTTGATAGCTCCGGTCTTG	45.0	55.0	58.4	58.1	360-362 bp	1.0	82.1
psbC-trnS-UGA_p4	AGCTGCAGCAGGATTTGAAA	GCTGAGTGGTTGATAGCTCC	45.0	55.0	58.4	58.1	367-369 bp	1.0	82.0
psbC-trnS-UGA_p5	AGCTGCAGCAGGATTTGAAA	GGCTGAGTGGTTGATAGCTC	45.0	55.0	58.4	58.1	368-370 bp	1.0	82.0