primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnH-GUG-psbA_p1 trnH-GUG-psbA 1 GATCCACTTGGCTACATCCG GTCGTGGGTATCTGGTTCAC 20 20 55.0 55.0 58.1 58.0 0.0 0.0 0.134890 76 386 527-589 1.000000 90.4 trnH-GUG-psbA_p2 trnH-GUG-psbA 2 GATCCACTTGGCTACATCCG CGTGGGTATCTGGTTCACTG 20 20 55.0 55.0 58.1 58.0 0.0 0.0 0.139065 76 386 525-587 1.000000 90.4 trnH-GUG-psbA_p3 trnH-GUG-psbA 3 CAATCCACTGCCTTGATCCA GTCGTGGGTATCTGGTTCAC 20 20 50.0 55.0 57.9 58.0 0.0 0.0 0.139252 76 386 541-603 1.000000 90.1 trnH-GUG-psbA_p4 trnH-GUG-psbA 4 AATCCACTGCCTTGATCCAC GTCGTGGGTATCTGGTTCAC 20 20 50.0 55.0 57.9 58.0 0.0 0.0 0.140760 76 386 540-602 1.000000 90.1 trnH-GUG-psbA_p5 trnH-GUG-psbA 5 GATCCACTTGGCTACATCCG GAGTGGGAGCTTAGTTTCCG 20 20 55.0 55.0 58.1 58.0 0.0 0.0 0.140460 76 386 977-1039 1.000000 87.2 trnK-UUU-rps16_p1 trnK-UUU-rps16 1 TCAGTCGCGGTCTTACAAAG GCCGTACGAGGAGAAAACTT 20 20 50.0 50.0 57.9 57.9 6.1 18.8 0.136305 4266 4925 976-1090 0.800000 77.4 trnK-UUU-rps16_p2 trnK-UUU-rps16 2 TCAGTCGCGGTCTTACAAAG TCTATCCCAATGAGCCGTCT 20 20 50.0 50.0 57.9 57.9 6.1 0.0 0.148430 4266 4925 920-1031 0.800000 77.2 trnK-UUU-rps16_p3 trnK-UUU-rps16 3 TCAGTCGCGGTCTTACAAAG AAGATCTTCGGAAAGTGGGC 20 20 50.0 50.0 57.9 57.9 6.1 0.9 0.175668 4266 4925 858-969 0.800000 77.1 trnK-UUU-rps16_p4 trnK-UUU-rps16 4 TCAGTCGCGGTCTTACAAAG GATCTTCGGAAAGTGGGCTT 20 20 50.0 50.0 57.9 57.9 6.1 0.0 0.175668 4266 4925 856-967 0.800000 77.1 trnK-UUU-rps16_p5 trnK-UUU-rps16 5 TCAGTCGCGGTCTTACAAAG AGCCGTCTATCGAATCGTTG 20 20 50.0 50.0 57.9 57.9 6.1 1.5 0.181442 4266 4925 908-1019 0.800000 77.0 rps16-trnQ-UUG_p1 rps16-trnQ-UUG 1 AAGTCGCACGTTGCTTTCTA GAGGTTCGAATCCTTCCGTC 20 20 45.0 55.0 58.1 58.1 8.1 16.9 0.215425 6083 7330 1258-1339 1.000000 86.0 rps16-trnQ-UUG_p2 rps16-trnQ-UUG 2 AAGTCGCACGTTGCTTTCTA TTCGGAGGTTCGAATCCTTC 20 20 45.0 50.0 58.1 57.3 8.1 16.9 0.806797 6083 7330 1262-1343 1.000000 81.3 rps16-trnQ-UUG_p3 rps16-trnQ-UUG 3 AAGTCGCACGTTGCTTTCTA TAAGGCAACGGGTTTTGGTC 20 20 45.0 50.0 58.1 58.7 8.1 0.0 0.818817 6083 7330 1288-1369 1.000000 81.1 rps16-trnQ-UUG_p4 rps16-trnQ-UUG 4 CGTTGCTTTCTACCACATCG GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 57.2 58.1 0.0 16.9 0.863824 6083 7330 1250-1331 1.000000 80.8 rps16-trnQ-UUG_p5 rps16-trnQ-UUG 5 AGTCGCACGTTGCTTTCTAC GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 58.9 58.1 8.1 16.9 0.938588 6083 7330 1257-1338 1.000000 80.2 psbI-trnS-GCU_p1 psbI-trnS-GCU 1 GTAATCCTGGACGCGAAGAA TGGACTAAAGCGTCGGATTG 20 20 50.0 50.0 57.7 58.0 15.9 0.0 0.293543 8476 8591 204-219 1.000000 83.7 psbI-trnS-GCU_p2 psbI-trnS-GCU 2 GTAATCCTGGACGCGAAGAA GTGGACTAAAGCGTCGGATT 20 20 50.0 50.0 57.7 58.0 15.9 0.0 0.294931 8476 8591 205-220 1.000000 83.7 psbI-trnS-GCU_p3 psbI-trnS-GCU 3 GTAATCCTGGACGCGAAGAA TTAGCTTGGGAGAGATGGCT 20 20 50.0 50.0 57.7 58.1 15.9 0.0 0.403912 8476 8591 227-242 1.000000 82.2 psbI-trnS-GCU_p4 psbI-trnS-GCU 4 GTAATCCTGGACGCGAAGAA GACTAAAGCGTCGGATTGCT 20 20 50.0 50.0 57.7 58.4 15.9 2.3 0.647384 8476 8591 202-217 1.000000 80.9 psbI-trnS-GCU_p5 psbI-trnS-GCU 5 GTAATCCTGGACGCGAAGAA CTGAGTGGACTAAAGCGTCG 20 20 50.0 55.0 57.7 58.4 15.9 0.0 0.670100 8476 8591 209-224 1.000000 80.5 trnS-GCU-trnG-UCC_p1 trnS-GCU-trnG-UCC 1 CAATCCGACGCTTTAGTCCA ACGAATCACACTTTTACCACT 20 21 50.0 38.1 58.0 55.5 0.0 0.0 3.540425 8680 9321 709-736 1.000000 56.6 trnS-GCU-trnG-UCC_p2 trnS-GCU-trnG-UCC 2 AATCCGACGCTTTAGTCCAC ACGAATCACACTTTTACCACT 20 21 50.0 38.1 58.0 55.5 0.0 0.0 3.541813 8680 9321 708-735 1.000000 56.6 trnS-GCU-trnG-UCC_p3 trnS-GCU-trnG-UCC 3 CAATCCGACGCTTTAGTCCA AGAACGAATCACACTTTTACCAC 20 23 50.0 39.1 58.0 57.3 0.0 0.0 3.673141 8680 9321 712-739 1.000000 55.5 trnS-GCU-trnG-UCC_p4 trnS-GCU-trnG-UCC 4 CAATCCGACGCTTTAGTCCA GAACGAATCACACTTTTACCACT 20 23 50.0 39.1 58.0 57.3 0.0 0.0 3.673141 8680 9321 711-738 1.000000 55.5 trnS-GCU-trnG-UCC_p5 trnS-GCU-trnG-UCC 5 AATCCGACGCTTTAGTCCAC GAACGAATCACACTTTTACCACT 20 23 50.0 39.1 58.0 57.3 0.0 0.0 3.674529 8680 9321 710-737 1.000000 55.5 atpH-atpI_p1 atpH-atpI 1 AACGGAAGCAGCAGAAATCA TTTTGCAACTTTAGCCGCAG 20 20 45.0 45.0 58.1 57.9 0.0 0.0 0.236520 13923 14971 836-1134 1.000000 84.7 atpH-atpI_p2 atpH-atpI 2 AGCCAATCCAGCAGCAATAA TTTTGCAACTTTAGCCGCAG 20 20 45.0 45.0 57.9 57.9 0.0 0.0 0.281186 13923 14971 854-1152 1.000000 84.3 atpH-atpI_p3 atpH-atpI 3 GCCAATCCAGCAGCAATAAC TTTTGCAACTTTAGCCGCAG 20 20 50.0 45.0 57.8 57.9 0.0 0.0 0.347127 13923 14971 853-1151 1.000000 83.7 atpH-atpI_p4 atpH-atpI 4 TCCAGCAGCAATAACGGAAG TTTTGCAACTTTAGCCGCAG 20 20 50.0 45.0 58.3 57.9 0.0 0.0 0.394902 13923 14971 848-1146 1.000000 83.4 atpH-atpI_p5 atpH-atpI 5 ATCCAGCAGCAATAACGGAA TTTTGCAACTTTAGCCGCAG 20 20 45.0 45.0 57.6 57.9 0.0 0.0 0.551108 13923 14971 849-1147 1.000000 82.1 rps2-rpoC2_p1 rps2-rpoC2 1 CCGCATCTCTTTTCGGAAGA GGGTCGAATCGATTGGTTGA 20 20 50.0 50.0 58.0 58.0 0.0 17.0 0.028687 16591 16802 875-881 1.000000 83.4 rps2-rpoC2_p2 rps2-rpoC2 2 TCTTCCCGCTTTTTGTTCCA GGGTCGAATCGATTGGTTGA 20 20 45.0 50.0 57.9 58.0 0.0 17.0 0.078592 16591 16802 847-853 1.000000 83.0 rps2-rpoC2_p3 rps2-rpoC2 3 CCGCATCTCTTTTCGGAAGA AAGGGTGCTGGTTTCAGAAG 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.023263 16591 16802 1094-1100 1.000000 82.8 rps2-rpoC2_p4 rps2-rpoC2 4 CCGCATCTCTTTTCGGAAGA GAACTGATTGGGTTGTTGCG 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.060622 16591 16802 1045-1051 1.000000 82.6 rps2-rpoC2_p5 rps2-rpoC2 5 TCTTCCCGCTTTTTGTTCCA AAGGGTGCTGGTTTCAGAAG 20 20 45.0 50.0 57.9 58.0 0.0 0.0 0.073168 16591 16802 1066-1072 1.000000 82.4 trnC-GCA-petN_p1 trnC-GCA-petN 1 TTTCCCCAGTTCAAATCCGG CACTACGAGCGAAAGGGAAA 20 20 50.0 50.0 58.1 57.9 0.0 0.0 0.156675 28452 29019 633-682 1.000000 84.6 trnC-GCA-petN_p2 trnC-GCA-petN 2 TTTCCCCAGTTCAAATCCGG ACGAGCGAAAGGGAAAATGT 20 20 50.0 45.0 58.1 58.1 0.0 0.0 0.189918 28452 29019 629-678 1.000000 84.3 trnC-GCA-petN_p3 trnC-GCA-petN 3 TTTCCCCAGTTCAAATCCGG TACCATTAAAGCAGCCCACG 20 20 50.0 50.0 58.1 58.3 0.0 0.0 0.336896 28452 29019 603-652 1.000000 83.2 trnC-GCA-petN_p4 trnC-GCA-petN 4 GGGGGACTGCAAATCCTTTT CACTACGAGCGAAAGGGAAA 20 20 50.0 50.0 58.4 57.9 14.7 0.0 0.430038 28452 29019 651-700 1.000000 82.2 trnC-GCA-petN_p5 trnC-GCA-petN 5 GGGGGACTGCAAATCCTTTT ACGAGCGAAAGGGAAAATGT 20 20 50.0 45.0 58.4 58.1 14.7 0.0 0.463281 28452 29019 647-696 1.000000 82.0 trnT-GGU-psbD_p1 trnT-GGU-psbD 1 GCCCTTTTAACTCAGCGGTA ACAAAAACGAAACGGTCCCT 20 20 50.0 45.0 57.9 58.2 0.0 0.0 0.349607 31544 32709 1324-1330 1.000000 80.0 trnT-GGU-psbD_p2 trnT-GGU-psbD 2 GCCCTTTTAACTCAGCGGTA CAAAAACGAAACGGTCCCTC 20 20 50.0 50.0 57.9 57.6 0.0 0.0 0.498082 31544 32709 1323-1329 1.000000 78.9 trnT-GGU-psbD_p3 trnT-GGU-psbD 3 GGCGTAAGTCATCGGTTCAA ACAAAAACGAAACGGTCCCT 20 20 50.0 45.0 58.3 58.2 0.0 0.0 0.528876 31544 32709 1287-1293 1.000000 78.7 trnT-GGU-psbD_p4 trnT-GGU-psbD 4 GCCCTTTTAACTCAGCGGTA TCCCTCCGTAACCAGTCATC 20 20 50.0 55.0 57.9 58.5 0.0 0.0 0.621666 31544 32709 1309-1315 1.000000 77.9 trnT-GGU-psbD_p5 trnT-GGU-psbD 5 GGCGTAAGTCATCGGTTCAA CAAAAACGAAACGGTCCCTC 20 20 50.0 50.0 58.3 57.6 0.0 0.0 0.677352 31544 32709 1286-1292 1.000000 77.5 trnT-UGU-trnL-UAA_p1 trnT-UGU-trnL-UAA 1 GCGATGCTCTAACCTCTGAG CCGTAGCGTCTACCGATTTC 20 20 55.0 55.0 57.9 58.2 0.0 10.2 0.381189 46389 47072 733-772 1.000000 82.7 trnT-UGU-trnL-UAA_p2 trnT-UGU-trnL-UAA 2 GCGATGCTCTAACCTCTGAG TAGTTCCGGGGTTTCTCTGA 20 20 55.0 50.0 57.9 57.7 0.0 0.0 0.446811 46389 47072 807-846 1.000000 81.7 trnT-UGU-trnL-UAA_p3 trnT-UGU-trnL-UAA 3 GGAATCGAACCGATGACCAT CCGTAGCGTCTACCGATTTC 20 20 50.0 55.0 57.8 58.2 15.5 10.2 0.488942 46389 47072 765-804 1.000000 81.6 trnT-UGU-trnL-UAA_p4 trnT-UGU-trnL-UAA 4 GCGATGCTCTAACCTCTGAG CGTCTACCGATTTCGCCATA 20 20 55.0 50.0 57.9 57.6 0.0 0.0 0.543526 46389 47072 727-766 1.000000 81.5 trnT-UGU-trnL-UAA_p5 trnT-UGU-trnL-UAA 5 GGAATCGAACCGATGACCAT TAGTTCCGGGGTTTCTCTGA 20 20 50.0 50.0 57.8 57.7 15.5 0.0 0.554564 46389 47072 839-878 1.000000 80.6 ndhC-trnV-UAC_p1 ndhC-trnV-UAC 1 TGCCAAAATAGGAATAAGACTTGA AGAAGGTCTACGGTTCGAGT 24 20 33.3 50.0 56.3 57.8 0.0 0.0 5.853835 50328 51186 942-971 1.000000 46.6 ndhC-trnV-UAC_p2 ndhC-trnV-UAC 2 TGCCAAAATAGGAATAAGACTTGA GAAGGTCTACGGTTCGAGTC 24 20 33.3 55.0 56.3 57.5 0.0 0.0 6.197608 50328 51186 941-970 1.000000 46.6 ndhC-trnV-UAC_p3 ndhC-trnV-UAC 3 TGCCAAAATAGGAATAAGACTTG AGAAGGTCTACGGTTCGAGT 23 20 34.8 50.0 54.9 57.8 0.0 0.0 6.253715 50328 51186 942-971 1.000000 46.6 ndhC-trnV-UAC_p4 ndhC-trnV-UAC 4 TGCCAAAATAGGAATAAGACTTGA GTTCGAGTCCGTATAGCCCT 24 20 33.3 55.0 56.3 58.7 0.0 0.0 6.339901 50328 51186 930-959 1.000000 46.6 ndhC-trnV-UAC_p5 ndhC-trnV-UAC 5 TGCCAAAATAGGAATAAGACTTGAT AGAAGGTCTACGGTTCGAGT 25 20 32.0 50.0 56.8 57.8 0.0 0.0 6.395612 50328 51186 942-971 1.000000 46.6 petA-psbJ_p1 petA-psbJ 1 GAGAAGGTTCAATTGGCCGA GCCGATACTACTGGAAGGAT 20 20 50.0 50.0 58.2 56.2 5.4 0.0 1.972289 62850 63734 1037-1062 1.000000 67.9 petA-psbJ_p2 petA-psbJ 2 TCGAGAAGGTTCAATTGGCC GCCGATACTACTGGAAGGAT 20 20 50.0 50.0 58.2 56.2 5.4 0.0 1.972289 62850 63734 1039-1064 1.000000 67.9 petA-psbJ_p3 petA-psbJ 3 AGAAGGTTCAATTGGCCGAA GCCGATACTACTGGAAGGAT 20 20 45.0 50.0 57.7 56.2 5.4 0.0 2.079870 62850 63734 1036-1061 1.000000 67.0 petA-psbJ_p4 petA-psbJ 4 CCCATTACGTGTCCAAGGTC GCCGATACTACTGGAAGGAT 20 20 55.0 50.0 58.3 56.2 0.0 0.0 2.059343 62850 63734 1122-1147 1.000000 66.9 petA-psbJ_p5 petA-psbJ 5 GACCCATTACGTGTCCAAGG GCCGATACTACTGGAAGGAT 20 20 55.0 50.0 58.3 56.2 0.0 0.0 2.059343 62850 63734 1124-1149 1.000000 66.9 rps19-rpl2_p1 rps19-rpl2 1 TGATTGGCTACAAAAGGATT GATTGTTCGTCGCCGTAGTA 20 20 35.0 50.0 52.7 57.8 0.0 0.0 5.475257 83435 83494 119-126 1.000000 46.0 rps19-rpl2_p2 rps19-rpl2 2 TGATTGGCTACAAAAGGATT CACAACCCCTTGGGGTTATC 20 20 35.0 55.0 52.7 58.2 0.0 35.0 5.449454 83435 83494 188-195 1.000000 44.2 rps19-rpl2_p3 rps19-rpl2 3 TGATTGGCTACAAAAGGATTT CACAACCCCTTGGGGTTATC 21 20 33.3 55.0 53.6 58.2 0.0 35.0 5.509160 83435 83494 188-195 1.000000 44.2 rps19-rpl2_p4 rps19-rpl2 4 TGATTGGCTACAAAAGGATT CGAGCCCCAATTGGTAGAAA 20 20 35.0 50.0 52.7 57.9 0.0 22.9 5.419566 83435 83494 214-221 1.000000 43.7 rps19-rpl2_p5 rps19-rpl2 5 TGATTGGCTACAAAAGGATTT CGAGCCCCAATTGGTAGAAA 21 20 33.3 50.0 53.6 57.9 0.0 22.9 5.479272 83435 83494 214-221 1.000000 43.7 ndhF_p1 ndhF 1 ATACCGTCGCCCCTTTTTAC AACTTGTCAAACTCGGCACA 20 20 50.0 45.0 58.0 58.3 0.0 0.0 0.283188 109061 111286 2917-2955 1.000000 80.8 ndhF_p2 ndhF 2 ATACCGTCGCCCCTTTTTAC ACTTGTCAAACTCGGCACAA 20 20 50.0 45.0 58.0 58.3 0.0 0.0 0.283188 109061 111286 2916-2954 1.000000 80.8 ndhF_p3 ndhF 3 ACAGGAACAAGAGGGATCCA AACTTGTCAAACTCGGCACA 20 20 50.0 45.0 58.0 58.3 15.2 0.0 0.299561 109061 111286 2804-2842 1.000000 80.8 ndhF_p4 ndhF 4 ACAGGAACAAGAGGGATCCA ACTTGTCAAACTCGGCACAA 20 20 50.0 45.0 58.0 58.3 15.2 0.0 0.299561 109061 111286 2803-2841 1.000000 80.8 ndhF_p5 ndhF 5 AAGAGGGATCCACCGAAGAA ACTTGTCAAACTCGGCACAA 20 20 50.0 45.0 58.0 58.3 15.2 0.0 0.302147 109061 111286 2797-2833 0.800000 72.3 trnL-UAG-ccsA_p1 trnL-UAG-ccsA 1 TAGACACGCTGCTCTTAGGA TGAAAGGGTCGAAAAAGAAA 20 20 50.0 35.0 57.9 53.2 0.0 0.0 4.885121 112554 112658 211-223 1.000000 46.4 trnL-UAG-ccsA_p2 trnL-UAG-ccsA 2 TAGACACGCTGCTCTTAGGA TTGAAAGGGTCGAAAAAGAA 20 20 50.0 35.0 57.9 53.2 0.0 0.0 4.885121 112554 112658 212-224 1.000000 46.4 trnL-UAG-ccsA_p3 trnL-UAG-ccsA 3 AAATTGGTAGACACGCTGCT TGAAAGGGTCGAAAAAGAAA 20 20 45.0 35.0 57.8 53.2 0.0 0.0 4.945848 112554 112658 218-230 1.000000 45.8 trnL-UAG-ccsA_p4 trnL-UAG-ccsA 4 AAATTGGTAGACACGCTGCT TTGAAAGGGTCGAAAAAGAA 20 20 45.0 35.0 57.8 53.2 0.0 0.0 4.945848 112554 112658 219-231 1.000000 45.8 trnL-UAG-ccsA_p5 trnL-UAG-ccsA 5 GTAGACACGCTGCTCTTAGG TGAAAGGGTCGAAAAAGAAA 20 20 55.0 35.0 57.8 53.2 0.0 0.0 4.957138 112554 112658 212-224 1.000000 45.8 ccsA_p1 ccsA 1 TGGCGGCATATCATCTCCTA TCAGTAGCTTTTCGATGGCC 20 20 50.0 50.0 58.1 58.0 8.0 0.0 0.086985 112659 113612 1683-1695 1.000000 82.9 ccsA_p2 ccsA 2 TGGCGGCATATCATCTCCTA CAGTAGCTTTTCGATGGCCT 20 20 50.0 50.0 58.1 58.0 8.0 3.3 0.092647 112659 113612 1682-1694 1.000000 82.9 ccsA_p3 ccsA 3 TAGACACGCTGCTCTTAGGA TCAGTAGCTTTTCGATGGCC 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.148453 112659 113612 1736-1748 1.000000 82.3 ccsA_p4 ccsA 4 TAGACACGCTGCTCTTAGGA CAGTAGCTTTTCGATGGCCT 20 20 50.0 50.0 57.9 58.0 0.0 3.3 0.154115 112659 113612 1735-1747 1.000000 82.3 ccsA_p5 ccsA 5 AACCTAAATTGGCCTGGCTC TCAGTAGCTTTTCGATGGCC 20 20 50.0 50.0 58.1 58.0 19.7 0.0 0.171543 112659 113612 2191-2200 1.000000 82.3 ycf1_p1 ycf1 1 GCTATTCTCTTGCGTGGTGA ATATATGGCAAACCCGACCG 20 20 50.0 50.0 58.0 57.8 0.0 0.0 0.189057 122671 122790 957-957 0.800000 73.7 ycf1_p2 ycf1 2 AGCTATTCTCTTGCGTGGTG ATATATGGCAAACCCGACCG 20 20 50.0 50.0 58.0 57.8 0.0 0.0 0.194648 122671 122790 958-958 0.800000 73.6 ycf1_p3 ycf1 3 CAGCTATTCTCTTGCGTGGT ATATATGGCAAACCCGACCG 20 20 50.0 50.0 58.0 57.8 0.0 0.0 0.194648 122671 122790 959-959 0.800000 73.6 ycf1_p4 ycf1 4 GCTATTCTCTTGCGTGGTGA GCAAACCCGACCGATAGAAA 20 20 50.0 50.0 58.0 58.3 0.0 0.0 0.280861 122671 122790 950-950 0.800000 73.0 ycf1_p5 ycf1 5 AGCTATTCTCTTGCGTGGTG GCAAACCCGACCGATAGAAA 20 20 50.0 50.0 58.0 58.3 0.0 0.0 0.286452 122671 122790 951-951 0.800000 72.9