primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score rbcL-trnK-UUU_p1 rbcL-trnK-UUU 1 AGTCCTGAATTAGCTGCTGC TGGAGTCGCACTTAAAAGCC 20 20 50.0 50.0 58.0 58.5 13.4 0.0 0.516122 1402 2065 783-818 1.000000 80.0 rbcL-trnK-UUU_p2 rbcL-trnK-UUU 2 AGTCCTGAATTAGCTGCTGC AACCCTACCGATGGTATGGA 20 20 50.0 50.0 58.0 57.5 13.4 20.0 0.517944 1402 2065 836-871 1.000000 79.7 rbcL-trnK-UUU_p3 rbcL-trnK-UUU 3 AGTCCTGAATTAGCTGCTGC AGTCGCACTTAAAAGCCGAG 20 20 50.0 50.0 58.0 58.6 13.4 6.4 0.606067 1402 2065 780-815 1.000000 79.3 rbcL-trnK-UUU_p4 rbcL-trnK-UUU 4 AGTCCTGAATTAGCTGCTGC AGTCGTGGTCTTACAAACCC 20 20 50.0 50.0 58.0 57.5 13.4 0.0 0.574042 1402 2065 851-886 1.000000 79.2 rbcL-trnK-UUU_p5 rbcL-trnK-UUU 5 AGTCCTGAATTAGCTGCTGC GTCGTGGTCTTACAAACCCT 20 20 50.0 50.0 58.0 57.5 13.4 0.0 0.574042 1402 2065 850-885 1.000000 79.2 psbA-trnH-GUG_p1 psbA-trnH-GUG 1 GGTATCTGGTTTACCGCGTT CAATCCACTGCCTTGATCCA 20 20 50.0 50.0 58.0 57.9 4.9 0.0 0.147617 6001 6342 581-600 1.000000 86.6 psbA-trnH-GUG_p2 psbA-trnH-GUG 2 GGTATCTGGTTTACCGCGTT AATCCACTGCCTTGATCCAC 20 20 50.0 50.0 58.0 57.9 4.9 0.0 0.149124 6001 6342 580-599 1.000000 86.6 psbA-trnH-GUG_p3 psbA-trnH-GUG 3 GGTATCTGGTTTACCGCGTT ACAATCCACTGCCTTGATCC 20 20 50.0 50.0 58.0 57.9 4.9 0.0 0.149124 6001 6342 582-601 1.000000 86.6 psbA-trnH-GUG_p4 psbA-trnH-GUG 4 GTTATACAATGGCGGTCCGT CAATCCACTGCCTTGATCCA 20 20 50.0 50.0 58.1 57.9 13.9 0.0 0.189250 6001 6342 1110-1129 1.000000 82.8 psbA-trnH-GUG_p5 psbA-trnH-GUG 5 GTTATACAATGGCGGTCCGT AATCCACTGCCTTGATCCAC 20 20 50.0 50.0 58.1 57.9 13.9 0.0 0.190757 6001 6342 1109-1128 1.000000 82.8 ycf1_p1 ycf1 1 CTCGGGAGAAATCTGGTTCG AACAAGTTCCTCGATGGTCA 20 20 55.0 45.0 58.1 56.8 0.0 0.0 1.293694 23464 23583 216-282 1.000000 81.7 ycf1_p2 ycf1 2 CTCGGGAGAAATCTGGTTCG ACGTTTTCGAGGACAAATCCA 20 21 55.0 42.9 58.1 58.2 0.0 0.0 1.230890 23464 23583 602-668 1.000000 81.1 ycf1_p3 ycf1 3 TGTCTTCAGCCTCGTCTTTG ACGTTTTCGAGGACAAATCCA 20 21 50.0 42.9 57.8 58.2 0.0 0.0 1.313639 23464 23583 860-926 1.000000 80.1 ycf1_p4 ycf1 4 TGTGCCAAGGTTTCAGAACA ACGTTTTCGAGGACAAATCCA 20 21 45.0 42.9 57.9 58.2 0.0 0.0 1.295083 23464 23583 1175-1241 1.000000 79.2 ycf1_p5 ycf1 5 TGCTTTCCCAGGATTCTTCG ACGTTTTCGAGGACAAATCCA 20 21 50.0 42.9 57.9 58.2 0.0 0.0 1.272645 23464 23583 953-953 0.250000 39.8 trnN-GUU-trnR-ACG_p1 trnN-GUU-trnR-ACG 1 CCGTTGTTCCTCAGTAGCTC CAGAGGATTAGAGCACGTGG 20 20 55.0 55.0 58.0 57.8 0.0 18.9 0.218238 26005 26614 750-768 1.000000 85.4 trnN-GUU-trnR-ACG_p2 trnN-GUU-trnR-ACG 2 ATTTGCCGTTGTTCCTCAGT CAGAGGATTAGAGCACGTGG 20 20 45.0 55.0 58.0 57.8 0.0 18.9 0.234651 26005 26614 755-773 1.000000 85.2 trnN-GUU-trnR-ACG_p3 trnN-GUU-trnR-ACG 3 TTGCCGTTGTTCCTCAGTAG CAGAGGATTAGAGCACGTGG 20 20 50.0 55.0 57.8 57.8 0.0 18.9 0.379725 26005 26614 753-771 1.000000 84.0 trnN-GUU-trnR-ACG_p4 trnN-GUU-trnR-ACG 4 TTCCTCAGTAGCTCAGTGGT CAGAGGATTAGAGCACGTGG 20 20 50.0 55.0 57.7 57.8 0.0 18.9 0.526686 26005 26614 744-762 1.000000 82.9 trnN-GUU-trnR-ACG_p5 trnN-GUU-trnR-ACG 5 CCGATTGGTCGTAGGTTCAA CAGAGGATTAGAGCACGTGG 20 20 50.0 55.0 57.6 57.8 0.0 18.9 0.589447 26005 26614 706-724 1.000000 82.8 trnI-GAU-rrn16_p1 trnI-GAU-rrn16 1 GGCACAACGACGCAATTATC CAAGGTAGCCGTACTGGAAG 20 20 50.0 55.0 58.2 57.7 0.0 7.8 0.485056 32375 32672 390-392 1.000000 80.4 trnI-GAU-rrn16_p2 trnI-GAU-rrn16 2 GGCACAACGACGCAATTATC AGTGACTGGAGTGAAGTCGT 20 20 50.0 50.0 58.2 58.3 0.0 0.0 0.496177 32375 32672 412-414 1.000000 80.1 trnI-GAU-rrn16_p3 trnI-GAU-rrn16 3 GGCACAACGACGCAATTATC AACAAGGTAGCCGTACTGGA 20 20 50.0 50.0 58.2 58.4 0.0 7.8 0.553655 32375 32672 392-394 1.000000 79.9 trnI-GAU-rrn16_p4 trnI-GAU-rrn16 4 GGCACAACGACGCAATTATC ACAAGGTAGCCGTACTGGAA 20 20 50.0 50.0 58.2 58.4 0.0 7.8 0.553655 32375 32672 391-393 1.000000 79.9 trnI-GAU-rrn16_p5 trnI-GAU-rrn16 5 GGCACAACGACGCAATTATC AAGTCGTAACAAGGTAGCCG 20 20 50.0 50.0 58.2 57.6 0.0 0.0 0.548742 32375 32672 399-401 1.000000 79.8 ycf2_p1 ycf2 1 CATGGTTCGATCCTGCAAGA CCGACAGAAAGTCCGTTTGA 20 20 50.0 50.0 58.0 58.1 13.6 0.0 0.167744 40643 40762 363-375 0.750000 79.2 ycf2_p2 ycf2 2 CATGGTTCGATCCTGCAAGA TTTTGAGTTGTTCTGCCGGA 20 20 50.0 45.0 58.0 58.0 13.6 5.0 0.073981 40643 40762 518-530 0.750000 78.7 ycf2_p3 ycf2 3 GGTTCGATCCTGCAAGAACT TTTTGAGTTGTTCTGCCGGA 20 20 50.0 45.0 57.9 58.0 5.2 5.0 0.146166 40643 40762 515-527 0.750000 78.2 ycf2_p4 ycf2 4 GGCTTATTCGAAAAACGCCC TTTTGAGTTGTTCTGCCGGA 20 20 50.0 45.0 58.1 58.0 16.2 5.0 0.141417 40643 40762 573-585 0.750000 77.8 ycf2_p5 ycf2 5 CCCGAAATGACCTTTCCCAA TTTTGAGTTGTTCTGCCGGA 20 20 50.0 45.0 58.1 58.0 0.0 5.0 0.127689 40643 40762 456-456 0.500000 61.8 rpl2-rps19_p1 rpl2-rps19 1 GATTCTTCGTCGCCGTACTA TGGTAGATGCTCTGGACCAA 20 20 50.0 50.0 57.3 58.0 0.0 0.0 0.793578 48628 48830 325-346 1.000000 84.6 rpl2-rps19_p2 rpl2-rps19 2 GATTCTTCGTCGCCGTACTA ATGGTAGATGCTCTGGACCA 20 20 50.0 50.0 57.3 57.8 0.0 9.1 0.925733 48628 48830 326-347 1.000000 83.5 rpl2-rps19_p3 rpl2-rps19 3 TTCTTCGTCGCCGTACTAAA TGGTAGATGCTCTGGACCAA 20 20 45.0 50.0 57.0 58.0 0.0 0.0 1.036204 48628 48830 323-344 1.000000 82.7 rpl2-rps19_p4 rpl2-rps19 4 GATTCTTCGTCGCCGTACTAA TGGTAGATGCTCTGGACCAA 21 20 47.6 50.0 57.9 58.0 0.0 0.0 1.105742 48628 48830 325-346 1.000000 82.1 rpl2-rps19_p5 rpl2-rps19 5 TTCTTCGTCGCCGTACTAAA ATGGTAGATGCTCTGGACCA 20 20 45.0 50.0 57.0 57.8 0.0 9.1 1.168359 48628 48830 324-345 1.000000 81.6 rpl20-rps18_p1 rpl20-rps18 1 TCTGTACAAGAAGCAATTGC AGCGAGTCGATCACTAGAAC 20 20 40.0 50.0 54.2 56.9 23.1 18.6 4.899223 64301 64570 422-430 1.000000 45.9 rpl20-rps18_p2 rpl20-rps18 2 TCTGTACAAGAAGCAATTGC GCGAGTCGATCACTAGAACT 20 20 40.0 50.0 54.2 56.9 23.1 18.6 4.899223 64301 64570 421-429 1.000000 45.9 rpl20-rps18_p3 rpl20-rps18 3 TCTGTACAAGAAGCAATTGC AGCGAGTCGATCACTAGAACT 20 21 40.0 47.6 54.2 58.4 23.1 18.6 5.146234 64301 64570 422-430 1.000000 45.1 rpl20-rps18_p4 rpl20-rps18 4 TCTGTACAAGAAGCAATTGC AAGCGAGTCGATCACTAGAAC 20 21 40.0 47.6 54.2 57.6 23.1 18.6 5.189122 64301 64570 423-431 1.000000 45.1 rpl20-rps18_p5 rpl20-rps18 5 ATCTGTACAAGAAGCAATTGC GCGAGTCGATCACTAGAACT 21 20 38.1 50.0 54.8 56.9 23.1 18.6 5.280420 64301 64570 422-430 1.000000 45.1 accD-trnQ-UUG_p1 accD-trnQ-UUG 1 AGGGTTCCAAGTACCTGGAT GAGGTTCGAATCCTTCCGTC 20 20 50.0 55.0 57.6 58.1 14.0 16.9 0.437186 75223 76565 2090-2136 1.000000 83.6 accD-trnQ-UUG_p2 accD-trnQ-UUG 2 ACTTTCGCATTCAACCCACA GAGGTTCGAATCCTTCCGTC 20 20 45.0 55.0 58.3 58.1 0.0 16.9 0.389746 75223 76565 1982-2007 0.750000 73.0 accD-trnQ-UUG_p3 accD-trnQ-UUG 3 ACTTTCGCATTCAACCCACA TCAGACCCTCAACTCCCTTT 20 20 45.0 50.0 58.3 57.9 0.0 0.0 0.432049 75223 76565 2279-2304 0.750000 72.5 accD-trnQ-UUG_p4 accD-trnQ-UUG 4 ACTTTCGCATTCAACCCACA AGATCAGACCCTCAACTCCC 20 20 45.0 55.0 58.3 58.1 0.0 0.0 0.440873 75223 76565 2282-2307 0.750000 72.4 accD-trnQ-UUG_p5 accD-trnQ-UUG 5 ACTTTCGCATTCAACCCACA GATCAGACCCTCAACTCCCT 20 20 45.0 55.0 58.3 58.1 0.0 0.0 0.440873 75223 76565 2281-2306 0.750000 72.4 trnQ-UUG-psbK_p1 trnQ-UUG-psbK 1 GACCAAAACCCGTTGCCTTA ACTTGAATAAAGGGCAGAGTCA 20 22 50.0 40.9 58.7 57.4 0.0 0.0 3.320265 76638 77274 732-761 1.000000 58.7 trnQ-UUG-psbK_p2 trnQ-UUG-psbK 2 CGAATAACGGGACCAAAACC ACTTGAATAAAGGGCAGAGTCA 20 22 50.0 40.9 57.1 57.4 0.0 0.0 3.546731 76638 77274 742-771 1.000000 56.8 trnQ-UUG-psbK_p3 trnQ-UUG-psbK 3 ACCAAAACCCGTTGCCTTAC ACTTGAATAAAGGGCAGAGTCA 20 22 50.0 40.9 59.0 57.4 0.0 0.0 3.606415 76638 77274 731-760 1.000000 56.4 trnQ-UUG-psbK_p4 trnQ-UUG-psbK 4 GACCAAAACCCGTTGCCTTA ACTTGAATAAAGGGCAGAGTCAA 20 23 50.0 39.1 58.7 58.0 0.0 0.0 3.693955 76638 77274 732-761 1.000000 55.7 trnQ-UUG-psbK_p5 trnQ-UUG-psbK 5 CGAATAACGGGACCAAAACC ACTTGAATAAAGGGCAGAGTCAA 20 23 50.0 39.1 57.1 58.0 0.0 0.0 3.920421 76638 77274 742-771 1.000000 53.8 trnR-UCU-atpA_p1 trnR-UCU-atpA 1 TTCAAATCCTATTGGGCGCA TTCACTGGGGAAGCAGAAAC 20 20 45.0 50.0 57.9 58.0 10.8 0.0 0.155042 80023 80213 301-310 1.000000 85.6 trnR-UCU-atpA_p2 trnR-UCU-atpA 2 TTCAAATCCTATTGGGCGCA CATTCACTGGGGAAGCAGAA 20 20 45.0 50.0 57.9 57.8 10.8 0.0 0.341321 80023 80213 303-312 1.000000 84.0 trnR-UCU-atpA_p3 trnR-UCU-atpA 3 TTCAAATCCTATTGGGCGCA AAGACATTCACTGGGGAAGC 20 20 45.0 50.0 57.9 57.8 10.8 0.0 0.342875 80023 80213 307-316 1.000000 83.9 trnR-UCU-atpA_p4 trnR-UCU-atpA 4 TTCAAATCCTATTGGGCGCA GGGGAAGCAGAAACCCTTTT 20 20 45.0 50.0 57.9 58.3 10.8 0.0 0.419267 80023 80213 295-304 1.000000 83.6 trnR-UCU-atpA_p5 trnR-UCU-atpA 5 AAGAAAAGCGCCCATTGTCT TTCACTGGGGAAGCAGAAAC 20 20 45.0 50.0 58.4 58.0 2.3 0.0 0.397921 80023 80213 360-369 1.000000 82.5 atpF-atpH_p1 atpF-atpH 1 GATGGCCAGTAACTCAAGCA TGGGCTGGTTGTAGCATTAG 20 20 50.0 50.0 57.9 57.6 13.0 0.0 0.532228 83057 83576 598-616 0.750000 72.2 atpF-atpH_p2 atpF-atpH 2 CGGATGGCCAGTAACTCAAG TGGGCTGGTTGTAGCATTAG 20 20 55.0 50.0 58.3 57.6 13.0 0.0 0.761716 83057 83576 600-618 0.750000 70.3 atpF-atpH_p3 atpF-atpH 3 TGGCCAGTAACTCAAGCAAA TGGGCTGGTTGTAGCATTAG 20 20 45.0 50.0 57.6 57.6 0.0 0.0 0.775033 83057 83576 596-614 0.750000 70.3 atpF-atpH_p4 atpF-atpH 4 GATGGCCAGTAACTCAAGCA TTTATGGGCTGGTTGTAGCA 20 20 50.0 45.0 57.9 57.1 13.0 0.0 1.003030 83057 83576 602-620 0.750000 68.4 atpF-atpH_p5 atpF-atpH 5 ATGGCCAGTAACTCAAGCAA TGGGCTGGTTGTAGCATTAG 20 20 45.0 50.0 57.4 57.6 13.0 0.0 1.003203 83057 83576 597-615 0.750000 68.4 atpH-atpI_p1 atpH-atpI 1 GCAGCAATAACAGAAGCAGC GTGAATCCATGGAAGGGCAT 20 20 50.0 50.0 58.1 57.9 0.0 20.7 0.172238 83823 85080 1222-1322 1.000000 86.4 atpH-atpI_p2 atpH-atpI 2 ATAGAAGCAAGTCCAACGGC GTGAATCCATGGAAGGGCAT 20 20 50.0 50.0 58.3 57.9 0.0 20.7 0.338621 83823 85080 1249-1349 1.000000 85.0 atpH-atpI_p3 atpH-atpI 3 GCAGCAATAACAGAAGCAGC GAATCCATGGAAGGGCATCA 20 20 50.0 50.0 58.1 57.6 0.0 20.7 0.464534 83823 85080 1220-1320 1.000000 84.1 atpH-atpI_p4 atpH-atpI 4 CTGTGCCTTGACCAATTCCA GTGAATCCATGGAAGGGCAT 20 20 50.0 50.0 58.4 57.9 0.0 20.7 0.458033 83823 85080 1275-1375 1.000000 84.0 atpH-atpI_p5 atpH-atpI 5 TGTGCCTTGACCAATTCCAG GTGAATCCATGGAAGGGCAT 20 20 50.0 50.0 58.4 57.9 0.0 20.7 0.458033 83823 85080 1274-1374 1.000000 84.0 trnY-GUA-trnE-UUC_p1 trnY-GUA-trnE-UUC 1 CGAATTTACAGTCCGTCCCC TCTCTTTCAAGGAGGCAACG 20 20 55.0 50.0 58.4 57.8 0.0 0.0 0.521328 101318 101377 147-147 1.000000 79.6 trnY-GUA-trnE-UUC_p2 trnY-GUA-trnE-UUC 2 ACGAATTTACAGTCCGTCCC TCTCTTTCAAGGAGGCAACG 20 20 50.0 50.0 57.6 57.8 0.0 0.0 0.545005 101318 101377 148-148 1.000000 79.4 trnY-GUA-trnE-UUC_p3 trnY-GUA-trnE-UUC 3 GAATTTACAGTCCGTCCCCA TCTCTTTCAAGGAGGCAACG 20 20 50.0 50.0 57.2 57.8 0.0 0.0 0.943825 101318 101377 146-146 1.000000 76.3 trnY-GUA-trnE-UUC_p4 trnY-GUA-trnE-UUC 4 CGAATTTACAGTCCGTCCCC CTCTTTCAAGGAGGCAACGG 20 20 55.0 55.0 58.4 58.8 0.0 0.0 1.191359 101318 101377 146-146 1.000000 74.3 trnY-GUA-trnE-UUC_p5 trnY-GUA-trnE-UUC 5 ACGAATTTACAGTCCGTCCC CTCTTTCAAGGAGGCAACGG 20 20 50.0 55.0 57.6 58.8 0.0 0.0 1.215036 101318 101377 147-147 1.000000 74.1 psbZ-trnfM-CAU_p1 psbZ-trnfM-CAU 1 CCGGTACATCATTATGGATTGGA CTTGAGGTCACGGGTTCAAA 23 20 43.5 50.0 58.1 58.0 0.0 4.2 3.132778 106984 107762 831-882 1.000000 62.7 psbZ-trnfM-CAU_p2 psbZ-trnfM-CAU 2 TCCGGTACATCATTATGGATTGG CTTGAGGTCACGGGTTCAAA 23 20 43.5 50.0 58.1 58.0 0.0 4.2 3.132778 106984 107762 832-883 1.000000 62.7 psbZ-trnfM-CAU_p3 psbZ-trnfM-CAU 3 CCGGTACATCATTATGGATTGGA TGAGGTCACGGGTTCAAATC 23 20 43.5 50.0 58.1 57.8 0.0 0.0 3.273483 106984 107762 829-880 1.000000 61.6 psbZ-trnfM-CAU_p4 psbZ-trnfM-CAU 4 CCGGTACATCATTATGGATTGGA TTTTTCGCGGAGTAGAGCAA 23 20 43.5 45.0 58.1 57.8 0.0 6.1 3.252405 106984 107762 876-927 1.000000 61.5 psbZ-trnfM-CAU_p5 psbZ-trnfM-CAU 5 TCCGGTACATCATTATGGATTGG TTTTTCGCGGAGTAGAGCAA 23 20 43.5 45.0 58.1 57.8 0.0 6.1 3.252405 106984 107762 877-928 1.000000 61.5 trnT-UGU-trnL-UAA_p1 trnT-UGU-trnL-UAA 1 GCGATGCTCTAACCTCTGAG ACCAATTTCGCCATATCCCC 20 20 55.0 50.0 57.9 58.0 0.0 0.0 0.137364 117170 118163 1041-1052 1.000000 85.3 trnT-UGU-trnL-UAA_p2 trnT-UGU-trnL-UAA 2 GCGATGCTCTAACCTCTGAG TAGCGTCTACCAATTTCGCC 20 20 55.0 50.0 57.9 58.1 0.0 0.0 0.202173 117170 118163 1049-1060 1.000000 84.8 trnT-UGU-trnL-UAA_p3 trnT-UGU-trnL-UAA 3 GGAATCGAACCGATGACCAT ACCAATTTCGCCATATCCCC 20 20 50.0 50.0 57.8 58.0 15.5 0.0 0.245117 117170 118163 1073-1084 1.000000 84.3 trnT-UGU-trnL-UAA_p4 trnT-UGU-trnL-UAA 4 GGAATCGAACCGATGACCAT TAGCGTCTACCAATTTCGCC 20 20 50.0 50.0 57.8 58.1 15.5 0.0 0.309926 117170 118163 1081-1092 1.000000 83.7 trnT-UGU-trnL-UAA_p5 trnT-UGU-trnL-UAA 5 GCGATGCTCTAACCTCTGAG AGTCCGTAGCGTCTACCAAT 20 20 55.0 50.0 57.9 58.2 0.0 10.2 0.372548 117170 118163 1055-1066 1.000000 83.4