Hotspot

tatC-groEL

Genome · 76380-76424 · 45 bp

Back to Chrysochromulina

Pi 0.0222
MarkerSeek score 60.60
Primer available yes
Label tatC-groEL

Feature Metadata

label_name
tatC-groEL
feature_type
igs
region
Genome
length_bp
45
variable_sites
1
pi
0.0222
unique_haplotype_count
2
primer_available
yes
alignment_reliability
1.00
markerseek_score
60.60

Pi Curve

Haplotype Network

Species Separation

Primer Ranking

Primer ID fwd_seq rev_seq fwd_gc rev_gc fwd_tm rev_tm amplicon_size cross_species_success_rate primer_score
tatC-groEL_p1 GCCATTTCATCCCCTTCAGT TCGACACTTCAAAATGCAGC 50.0 45.0 57.9 57.3 224 bp 1.0 73.7
tatC-groEL_p2 GCCATTTCATCCCCTTCAGT CGACACTTCAAAATGCAGCT 50.0 45.0 57.9 57.3 223 bp 1.0 73.6
tatC-groEL_p3 ATCCCCTTCAGTATCCAGCA TCGACACTTCAAAATGCAGC 50.0 45.0 57.8 57.3 216 bp 1.0 73.3
tatC-groEL_p4 TCCCCTTCAGTATCCAGCAT TCGACACTTCAAAATGCAGC 50.0 45.0 57.8 57.3 215 bp 1.0 73.3
tatC-groEL_p5 TCCCCTTCAGTATCCAGCAT CGACACTTCAAAATGCAGCT 50.0 45.0 57.8 57.3 214 bp 1.0 73.2